# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/CBM13/fasta_for_each_cluster/cluster_677.txt # target HMM database: merged_hmms/CBM13.hmm # per-dom hits tabular output: hmmscan_out/domain_result/CBM13/CBM13_cluster_677.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: AAF51113.2|CBM13|GT27|2.4.1.41 [L=633] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2e-18 53.5 3.2 2.3e-18 53.3 1.5 1.9 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.7 0.0 0.34 0.34 106 125 .. 393 413 .. 385 415 .. 0.77 2 ! 53.3 1.5 2.3e-18 2.3e-18 13 134 .. 517 630 .. 510 633 .] 0.80 Alignments for each domain: == domain 1 score: -2.7 bits; conditional E-value: 0.34 CBM13.hmm 106 cLdvkggad.gtpvqqwdcng 125 +dv+gg++ + +w+c g AAF51113.2|CBM13|GT27|2.4.1.41 393 KMDVWGGENlEISFRVWQCGG 413 589998866578899999976 PP == domain 2 score: 53.3 bits; conditional E-value: 2.3e-18 CBM13.hmm 13 nsgkclggst..aaganvqlwdccn.ganQqWtltsdgtirlenhqsgkcLd.vaasstaagaevqqytcngganQqWr 87 s cl++++ +g+ v + +c+n g+nQ W +t+ g+i+ h+ ++cL+ v ++ a g++v++++c+++ nQ+W AAF51113.2|CBM13|GT27|2.4.1.41 517 DSTECLDTMGhlIDGT-VGIFPCHNtGGNQEWAFTKRGEIK---HD-DLCLTlV-TF--ARGSQVVLKACDDSENQRWI 587 4788997666434444.99*****98899*********877...43.37***55.45..69*****************9 PP CBM13.hmm 88 lesvgsgyykirnrasgkcLdvkgg.adgtpvqqwdcng.ganQqWsvl 134 + + +r++ + cLd + ++g v ++cn+ Q+Ws+ AAF51113.2|CBM13|GT27|2.4.1.41 588 MREG----GLVRHYKINVCLDSRDQsQQG--VSAQHCNSaLGTQRWSFG 630 9655....4567766689*****655557..99******8889***985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (633 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 78.10 // Query: ULT92348.1|CBM13|GT27 [L=588] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-13 36.5 0.2 1.4e-12 34.5 0.2 2.2 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.5 0.2 1.4e-12 1.4e-12 14 137 .. 467 584 .. 455 588 .] 0.80 Alignments for each domain: == domain 1 score: 34.5 bits; conditional E-value: 1.4e-12 CBM13.hmm 14 sgkclggstaagan.vqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyykir 99 ++cl++++ + ++ l +c++ g+nQ W +++ + +++n+ s++cLd +s a v++ +c + + + +e++ ++++ ULT92348.1|CBM13|GT27 467 GHLCLDSMARKENEaPALFACHGtGGNQEWIFDDLT-KTFKNAISQMCLD---FS-AEKKDVVMVKCENLRSNTMVVEKN----GWLT 545 689**88884444338999*9987899******887.678899999****...34.89999******7777788888777....6784 PP CBM13.hmm 100 nrasgkcLdvkgg.ad.gtpvqqwdcng.ganQqWsvlksd 137 g+cL+v+++ + ++ ++c+ + Q+W ++k + ULT92348.1|CBM13|GT27 546 Q--GGMCLTVTQKsPNsEYQIFGSHCDVkNGAQRWIFEKLE 584 4..79******98955379999****998999***998765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (588 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 46.24 // Query: NP_644678.1|CBM13|GT27|2.4.1.41 [L=570] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.5e-18 53.1 2.8 8.4e-18 51.4 2.1 2.0 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.0 0.0 0.1 0.1 105 125 .. 325 346 .. 318 349 .. 0.81 2 ! 51.4 2.1 8.4e-18 8.4e-18 15 134 .. 453 565 .. 447 569 .. 0.78 Alignments for each domain: == domain 1 score: -1.0 bits; conditional E-value: 0.1 CBM13.hmm 105 kcLdvkggad.gtpvqqwdcng 125 + +dv+gg++ + +w+c g NP_644678.1|CBM13|GT27|2.4.1.41 325 MMMDVWGGENlEISFRVWQCGG 346 789***8866578899999977 PP == domain 2 score: 51.4 bits; conditional E-value: 8.4e-18 CBM13.hmm 15 gkclggstaagan.vqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngg.anQqWrle 89 +cl++ ++ ++ v +++c+n g+nQ W lt++++++ h ++cL+v ++g+ ++++ c + + Q+W+ + NP_644678.1|CBM13|GT27|2.4.1.41 453 TNCLDTLGHFADGvVGIYECHNaGGNQEWALTKEKSVK---HM-DLCLTVVD--RSPGSLIRLQGCRENdSRQKWEQI 524 57997666444444*******98899******888444...33.47***753..359*********877688***664 PP CBM13.hmm 90 svgsgyykirnrasgkcLdvkgg.adgtpvqqwdcngganQqWsvl 134 g+ k+r++ s++cLd + + g + + c + +QqW+++ NP_644678.1|CBM13|GT27|2.4.1.41 525 ---EGNSKLRHVGSNLCLDSRTAkSGG--LSVEVCGPALSQQWKFS 565 ...34589*************654445..99****99******986 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (570 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 100.13 // Query: AAS64620.1|CBM13|GT27|2.4.1.41 [L=633] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2e-18 53.5 3.2 2.3e-18 53.3 1.5 1.9 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.7 0.0 0.34 0.34 106 125 .. 393 413 .. 385 415 .. 0.77 2 ! 53.3 1.5 2.3e-18 2.3e-18 13 134 .. 517 630 .. 510 633 .] 0.80 Alignments for each domain: == domain 1 score: -2.7 bits; conditional E-value: 0.34 CBM13.hmm 106 cLdvkggad.gtpvqqwdcng 125 +dv+gg++ + +w+c g AAS64620.1|CBM13|GT27|2.4.1.41 393 KMDVWGGENlEISFRVWQCGG 413 589998866578899999976 PP == domain 2 score: 53.3 bits; conditional E-value: 2.3e-18 CBM13.hmm 13 nsgkclggst..aaganvqlwdccn.ganQqWtltsdgtirlenhqsgkcLd.vaasstaagaevqqytcngganQqWr 87 s cl++++ +g+ v + +c+n g+nQ W +t+ g+i+ h+ ++cL+ v ++ a g++v++++c+++ nQ+W AAS64620.1|CBM13|GT27|2.4.1.41 517 DSTECLDTMGhlIDGT-VGIFPCHNtGGNQEWAFTKRGEIK---HD-DLCLTlV-TF--ARGSQVVLKACDDSENQRWI 587 4788997666434444.99*****98899*********877...43.37***55.45..69*****************9 PP CBM13.hmm 88 lesvgsgyykirnrasgkcLdvkgg.adgtpvqqwdcng.ganQqWsvl 134 + + +r++ + cLd + ++g v ++cn+ Q+Ws+ AAS64620.1|CBM13|GT27|2.4.1.41 588 MREG----GLVRHYKINVCLDSRDQsQQG--VSAQHCNSaLGTQRWSFG 630 9655....4567766689*****655557..99******8889***985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (633 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 123.48 // Query: UXI16557.1|CBM13|GT27 [L=667] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.2e-17 50.1 1.5 3.8e-17 49.3 1.5 1.4 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 49.3 1.5 3.8e-17 3.8e-17 15 135 .. 550 664 .. 539 667 .] 0.81 Alignments for each domain: == domain 1 score: 49.3 bits; conditional E-value: 3.8e-17 CBM13.hmm 15 gkclggstaaga.nvqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyykirn 100 + cl+++++++ n+ +++c++ g nQ W +t d l+n +s++c++ +++ ++ +v++ c g+++Q+W + ++ i+ UXI16557.1|CBM13|GT27 550 HECLDTMGNKNLgNLFMYQCHGqGINQDWAFTFDR--LLKNSNSNLCVTLNGFE--PNRPVVLAECVGDDSQKWVWAF--DRH--IKL 629 67997777555536******998999******999..78899989****88885..9****************99843..455..555 PP CBM13.hmm 101 rasgkcLdvkgg.adgtpvqqwdcng.ganQqWsvlk 135 + ++cLd + + g +++ cn+ + QqW + + UXI16557.1|CBM13|GT27 630 LSRNLCLDSRFKkQIG--IVVDVCNTgSIEQQWYFDQ 664 4458******764558..99999**9999****9876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (667 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 129.28 // Query: WAR18993.1|CBM13|GT27 [L=740] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.2e-17 48.9 0.0 3.7e-16 46.1 0.0 2.0 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.3 0.0 0.061 0.061 104 126 .. 352 375 .. 347 377 .. 0.82 2 ! 46.1 0.0 3.7e-16 3.7e-16 16 149 .. 503 630 .. 497 648 .. 0.77 Alignments for each domain: == domain 1 score: -0.3 bits; conditional E-value: 0.061 CBM13.hmm 104 gkcLdvkggad.gtpvqqwdcngg 126 ++++dv+gg++ + +w+c+g+ WAR18993.1|CBM13|GT27 352 DMAMDVWGGENlEISFRVWQCHGT 375 5789***8866578899****985 PP == domain 2 score: 46.1 bits; conditional E-value: 3.7e-16 CBM13.hmm 16 kclggstaagan.vqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngg.anQqW.rlesvgsgyykir 99 +c++++++ ++ + l +c+n g+nQ +t+ts+g ir h ++cL+ ++ ++ga +++y+c+ + a Q W r+ ++ + +r WAR18993.1|CBM13|GT27 503 MCIDTMGNFADGiLGLFQCHNsGGNQEFTMTSNGNIR---HL-DLCLTLSNE--DPGAVIKLYQCTPDnALQLWdRV-ED---SSMLR 580 5776666444455899999998999*********877...44.37***7443..5**********966588***555.44...25899 PP CBM13.hmm 100 nrasgkcLdvkgg.adgtpvqqwdcng.ganQqWsvlksdlkikliaekvip 149 ++ c+d g ++ ++c+ +++Q+W++++ +l +++++ WAR18993.1|CBM13|GT27 581 SKYYSVCIDSGDVqRKG--LVANSCDHlSPSQKWRFSYFQLFGDFHFYDFFL 630 98778****99655557..*******************99999988888754 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (740 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 107.98 // Query: NP_608773.1|CBM13|GT27|2.4.1.41 [L=633] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2e-18 53.5 3.2 2.3e-18 53.3 1.5 1.9 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.7 0.0 0.34 0.34 106 125 .. 393 413 .. 385 415 .. 0.77 2 ! 53.3 1.5 2.3e-18 2.3e-18 13 134 .. 517 630 .. 510 633 .] 0.80 Alignments for each domain: == domain 1 score: -2.7 bits; conditional E-value: 0.34 CBM13.hmm 106 cLdvkggad.gtpvqqwdcng 125 +dv+gg++ + +w+c g NP_608773.1|CBM13|GT27|2.4.1.41 393 KMDVWGGENlEISFRVWQCGG 413 589998866578899999976 PP == domain 2 score: 53.3 bits; conditional E-value: 2.3e-18 CBM13.hmm 13 nsgkclggst..aaganvqlwdccn.ganQqWtltsdgtirlenhqsgkcLd.vaasstaagaevqqytcngganQqW 86 s cl++++ +g+ v + +c+n g+nQ W +t+ g+i+ h+ ++cL+ v ++ a g++v++++c+++ nQ+W NP_608773.1|CBM13|GT27|2.4.1.41 517 DSTECLDTMGhlIDGT-VGIFPCHNtGGNQEWAFTKRGEIK---HD-DLCLTlV-TF--ARGSQVVLKACDDSENQRW 586 4788997666434444.99*****98899*********877...43.37***55.45..69***************** PP CBM13.hmm 87 rlesvgsgyykirnrasgkcLdvkgg.adgtpvqqwdcng.ganQqWsvl 134 + + +r++ + cLd + ++g v ++cn+ Q+Ws+ NP_608773.1|CBM13|GT27|2.4.1.41 587 IMREG----GLVRHYKINVCLDSRDQsQQG--VSAQHCNSaLGTQRWSFG 630 99655....4567766689*****655557..99******8889***985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (633 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 115.90 // Query: AAH93817.1|CBM13|GT27|2.4.1.41 [L=237] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.6e-17 48.8 0.0 8.1e-17 48.2 0.0 1.2 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 48.2 0.0 8.1e-17 8.1e-17 9 134 .. 102 229 .. 95 236 .. 0.79 Alignments for each domain: == domain 1 score: 48.2 bits; conditional E-value: 8.1e-17 CBM13.hmm 9 lvnvn.sgkclggstaaganvqlwdccnganQqWtltsdg.....tirlenhqs..gkcLdvaasstaagaevqqytcn 79 ++n++ s cl++ +++g+ +l++c++ ++Q ++++dg + + +kcL +++g ++++c AAH93817.1|CBM13|GT27|2.4.1.41 102 VRNSKaSAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGllqlgPLGSTAF-LpdSKCLV----DDGTGRMPTLKKCE 175 556665*****999999999*****988888*********777552222233.13478997....556999*******8 PP CBM13.hmm 80 gg..anQq.WrlesvgsgyykirnrasgkcLdvkgg..ad.gtpvqqwdcngganQqWsvl 134 + + Q+ W +++ + i++ra+g+cL+v+ + a+ g +++++ c+g Q+W++ AAH93817.1|CBM13|GT27|2.4.1.41 176 DVarPTQRlWDFTQS----GPIVSRATGRCLEVEMSkdANfGLRLVVQRCSG---QKWMIR 229 887767755***766....78*************6669999*********66...999764 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (237 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 58.05 // Query: NP_068580.1|CBM13|GT27|2.4.1.41 [L=237] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.6e-17 48.8 0.0 8.1e-17 48.2 0.0 1.2 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 48.2 0.0 8.1e-17 8.1e-17 9 134 .. 102 229 .. 95 236 .. 0.79 Alignments for each domain: == domain 1 score: 48.2 bits; conditional E-value: 8.1e-17 CBM13.hmm 9 lvnvn.sgkclggstaaganvqlwdccnganQqWtltsdg.....tirlenhqs..gkcLdvaasstaagaevqqytc 78 ++n++ s cl++ +++g+ +l++c++ ++Q ++++dg + + +kcL +++g ++++c NP_068580.1|CBM13|GT27|2.4.1.41 102 VRNSKaSAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGllqlgPLGSTAF-LpdSKCLV----DDGTGRMPTLKKC 174 556665*****999999999*****988888*********777552222233.13478997....556999******* PP CBM13.hmm 79 ngg..anQq.WrlesvgsgyykirnrasgkcLdvkgg..ad.gtpvqqwdcngganQqWsvl 134 + + Q+ W +++ + i++ra+g+cL+v+ + a+ g +++++ c+g Q+W++ NP_068580.1|CBM13|GT27|2.4.1.41 175 EDVarPTQRlWDFTQS----GPIVSRATGRCLEVEMSkdANfGLRLVVQRCSG---QKWMIR 229 8887767755***766....78*************6669999*********66...999764 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (237 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 54.86 // Query: AAH93819.1|CBM13|GT27|2.4.1.41 [L=237] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.6e-17 48.8 0.0 8.1e-17 48.2 0.0 1.2 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 48.2 0.0 8.1e-17 8.1e-17 9 134 .. 102 229 .. 95 236 .. 0.79 Alignments for each domain: == domain 1 score: 48.2 bits; conditional E-value: 8.1e-17 CBM13.hmm 9 lvnvn.sgkclggstaaganvqlwdccnganQqWtltsdg.....tirlenhqs..gkcLdvaasstaagaevqqytcn 79 ++n++ s cl++ +++g+ +l++c++ ++Q ++++dg + + +kcL +++g ++++c AAH93819.1|CBM13|GT27|2.4.1.41 102 VRNSKaSAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGllqlgPLGSTAF-LpdSKCLV----DDGTGRMPTLKKCE 175 556665*****999999999*****988888*********777552222233.13478997....556999*******8 PP CBM13.hmm 80 gg..anQq.WrlesvgsgyykirnrasgkcLdvkgg..ad.gtpvqqwdcngganQqWsvl 134 + + Q+ W +++ + i++ra+g+cL+v+ + a+ g +++++ c+g Q+W++ AAH93819.1|CBM13|GT27|2.4.1.41 176 DVarPTQRlWDFTQS----GPIVSRATGRCLEVEMSkdANfGLRLVVQRCSG---QKWMIR 229 887767755***766....78*************6669999*********66...999764 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (237 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 50.76 // Query: NP_004473.1|CBM13|GT27|2.4.1.41 [L=633] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9.3e-17 48.0 0.3 1.7e-16 47.2 0.3 1.4 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 47.2 0.3 1.7e-16 1.7e-16 8 135 .. 508 631 .. 504 633 .] 0.79 Alignments for each domain: == domain 1 score: 47.2 bits; conditional E-value: 1.7e-16 CBM13.hmm 8 rlvnvnsgkcl..ggstaaganvqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngg. 81 +++v++ +cl g +++ g+++++++c++ g+nQ ++++++++ir +n q+++cL aa++ vq+++c+ + NP_004473.1|CBM13|GT27|2.4.1.41 508 YIKSVGQPLCLdvGENNQGGKPLIMYTCHGlGGNQYFEYSAQHEIR-HNIQKELCLH------AAQGLVQLKACTYKg 578 588999*****54434444456*******999********999777.6777789**9......79999******7332 PP CBM13.hmm 82 ......anQqWrlesvgsgyykirnras.gkcLdvkggadgtpvqqwdcng.ganQqWsvlk 135 + Q W+++++ + n ++cL ++ g + +cn ++ Q+W +++ NP_004473.1|CBM13|GT27|2.4.1.41 579 hktvvtGEQIWEIQKD----QLLYN-PFlKMCLSAN----GEHPSLVSCNPsDPLQKWILSQ 631 34455569*****998....67899.7769***999....57789******7888***7765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (633 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 108.46 // Query: NP_766039.1|CBM13|GT27|2.4.1.41 [L=622] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.9e-16 47.1 0.2 3.4e-16 46.2 0.2 1.4 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 46.2 0.2 3.4e-16 3.4e-16 7 133 .. 499 621 .. 495 622 .] 0.80 Alignments for each domain: == domain 1 score: 46.2 bits; conditional E-value: 3.4e-16 CBM13.hmm 7 yrlvnvnsgkcl..ggstaaganvqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcn.. 79 +++n ++++cl g ++ g++++++ c+n g+nQ +++ts+ +r n +++cL a+g+++ + +c+ NP_766039.1|CBM13|GT27|2.4.1.41 499 GAIKNLGTNQCLdvGENNRGGKPLIMYVCHNlGGNQYFEYTSQRDLRH-NIGKQLCLH------ASGSTLGLRSCQfv 569 579999******54444455557********99********9997773.444579**9......799********544 PP CBM13.hmm 80 ..gg...anQqWrlesvgsgyykirnrasgkcLdvkggadgtpvqqwdcng.ganQqWsv 133 ++ ++ W+l+++ irn sg cL+ + + + +cn +++Q W + NP_766039.1|CBM13|GT27|2.4.1.41 570 gkNSrvpKDEEWELTQD----QLIRNSGSGTCLTSQD----KKPAMAPCNPrDPYQLWLF 621 32335777899***988....789**999*****994....467899****9999***76 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (622 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 113.91 // Query: NP_056551.1|CBM13|GT27|2.4.1.41 [L=633] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-15 44.4 0.1 2.5e-15 43.4 0.1 1.5 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.4 0.1 2.5e-15 2.5e-15 8 136 .. 508 632 .. 504 633 .] 0.79 Alignments for each domain: == domain 1 score: 43.4 bits; conditional E-value: 2.5e-15 CBM13.hmm 8 rlvnvnsgkcl..ggstaaganvqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytc...n 79 +++v++ +cl g +++ g++++l++c++ g+nQ ++++++ +ir +n q+++cL a+++ vq+++c NP_056551.1|CBM13|GT27|2.4.1.41 508 YIKSVGQPLCLdvGENNQGGKPLILYTCHGlGGNQYFEYSAQREIR-HNIQKELCLH------ATQGVVQLKACvykG 578 588999*****54434444456*******999********999777.7888789**9......7899*******5430 PP CBM13.hmm 80 gg.....anQqWrlesvgsgyykirnrasgkcLdvkggadgtpvqqwdcng.ganQqWsvlks 136 + Q W++ ++ + n ++cL + g + +c+ + Q+W ++++ NP_056551.1|CBM13|GT27|2.4.1.41 579 -HrtiapGEQIWEIRKD----QLLYNPLFKMCLSSN----GEHPNLVPCDAtDLLQKWIFSQN 632 .24465669*****988....678**999****998....5677899**995556***98765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (633 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 111.33 // Query: NP_009141.1|CBM13|GT27|2.4.1.41 [L=622] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.8e-15 43.8 0.1 3.3e-15 43.0 0.1 1.4 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.0 0.1 3.3e-15 3.3e-15 7 133 .. 499 621 .. 495 622 .] 0.77 Alignments for each domain: == domain 1 score: 43.0 bits; conditional E-value: 3.3e-15 CBM13.hmm 7 yrlvnvnsgkcl..ggstaaganvqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcn.. 79 +++n ++++cl g ++ g+++++++c++ g+nQ +++t++ +r n +++cL v + +++ + +c+ NP_009141.1|CBM13|GT27|2.4.1.41 499 GAIKNLGTNQCLdvGENNRGGKPLIMYSCHGlGGNQYFEYTTQRDLRH-NIAKQLCLHV------SKGALGLGSCHft 569 579999******54444455557*******999********9997774.444579***7......5667888888543 PP CBM13.hmm 80 gg.....anQqWrlesvgsgyykirnrasgkcLdvkggadgtpvqqwdcng.ganQqWsv 133 g+ ++ W+l ++ irn sg cL+ + + + +cn ++ Q W + NP_009141.1|CBM13|GT27|2.4.1.41 570 GKnsqvpKDEEWELAQD----QLIRNSGSGTCLTSQD----KKPAMAPCNPsDPHQLWLF 621 33223555677***888....789**999*****994....467899***98999***76 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (622 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 111.92 // [ok]