# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/CBM13/fasta_for_each_cluster/cluster_232.txt # target HMM database: merged_hmms/CBM13.hmm # per-dom hits tabular output: hmmscan_out/domain_result/CBM13/CBM13_cluster_232.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: ALX09868.1|CBM13|CBM6|CBM62|GH5_34 [L=948] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.1e-10 27.3 2.3 2.1e-10 27.3 2.3 3.1 3 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.2 0.0 0.12 0.12 105 123 .. 129 148 .. 117 170 .. 0.65 2 ! 12.7 2.3 6.5e-06 6.5e-06 45 100 .. 522 573 .. 442 578 .. 0.72 3 ! 27.3 2.3 2.1e-10 2.1e-10 5 138 .. 524 651 .. 520 676 .. 0.79 Alignments for each domain: == domain 1 score: -1.2 bits; conditional E-value: 0.12 CBM13.hmm 105 kcLdvkgg.adgtpvqqwdc 123 +++++ +g ++g+ + qw++ ALX09868.1|CBM13|CBM6|CBM62|GH5_34 129 LVITIGNGaNNGNHNAQWAR 148 44555544555777777776 PP == domain 2 score: 12.7 bits; conditional E-value: 6.5e-06 CBM13.hmm 45 sdgtirlenhqsgkcLd.vaasstaagaevqqytcngganQqWrlesvgsgyykirn 100 +dgt+++ n+ +gk L+ v+ + +++ ++ g + Q+W++++ g+g+y+i + ALX09868.1|CBM13|CBM6|CBM62|GH5_34 522 PDGTYKFLNRANGKTLQeVT-----GNNSIITADYKGITEQHWKIQHIGGGQYRISS 573 67789999999889998663.....23346666675668999999888899999866 PP == domain 3 score: 27.3 bits; conditional E-value: 2.1e-10 CBM13.hmm 5 gtyrlvnvnsgkclggstaagan.vqlwdccnganQqWtltsdg..tirlenhqsgkcLdva.asstaagaevqq 75 gty++ n+++gk l ++ +g+n ++++d+++ ++Q W++++ g ++r+ ++ g + ++ ++v ALX09868.1|CBM13|CBM6|CBM62|GH5_34 524 GTYKFLNRANGKTL--QEVTGNNsIITADYKGITEQHWKIQHIGggQYRISSAGRGWNWNWWmGF-----GTVGW 591 7899**********..5666665599999666566*******9999******9854444444444.....46777 PP CBM13.hmm 76 ytcngganQqWrlesvgsgyykirnrasgkcLdvkggadgtpvqqwdcngganQqWsvlksdl 138 + g++ + ++++g+gyy+i+ + +g L++++ +d +++ + +gganQqW++l +++ ALX09868.1|CBM13|CBM6|CBM62|GH5_34 592 WGT--GSSTCFIISPTGDGYYRIVLVGDGTNLQISS-GDPSKIEGKAFHGGANQQWAILPVSA 651 774..55689*************************6.5668899999*********9987665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (948 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 42.79 // Query: ANV77642.1|CBM13|CBM6|CBM62|GH5_34 [L=948] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.1e-10 27.3 2.3 2.1e-10 27.3 2.3 3.1 3 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.2 0.0 0.12 0.12 105 123 .. 129 148 .. 117 170 .. 0.65 2 ! 12.7 2.3 6.5e-06 6.5e-06 45 100 .. 522 573 .. 442 578 .. 0.72 3 ! 27.3 2.3 2.1e-10 2.1e-10 5 138 .. 524 651 .. 520 676 .. 0.79 Alignments for each domain: == domain 1 score: -1.2 bits; conditional E-value: 0.12 CBM13.hmm 105 kcLdvkgg.adgtpvqqwdc 123 +++++ +g ++g+ + qw++ ANV77642.1|CBM13|CBM6|CBM62|GH5_34 129 LVITIGNGaNNGNHNAQWAR 148 44555544555777777776 PP == domain 2 score: 12.7 bits; conditional E-value: 6.5e-06 CBM13.hmm 45 sdgtirlenhqsgkcLd.vaasstaagaevqqytcngganQqWrlesvgsgyykirn 100 +dgt+++ n+ +gk L+ v+ + +++ ++ g + Q+W++++ g+g+y+i + ANV77642.1|CBM13|CBM6|CBM62|GH5_34 522 PDGTYKFLNRANGKTLQeVT-----GNNSIITADYKGITEQHWKIQHIGGGQYRISS 573 67789999999889998663.....23346666675668999999888899999866 PP == domain 3 score: 27.3 bits; conditional E-value: 2.1e-10 CBM13.hmm 5 gtyrlvnvnsgkclggstaagan.vqlwdccnganQqWtltsdg..tirlenhqsgkcLdva.asstaagaevqq 75 gty++ n+++gk l ++ +g+n ++++d+++ ++Q W++++ g ++r+ ++ g + ++ ++v ANV77642.1|CBM13|CBM6|CBM62|GH5_34 524 GTYKFLNRANGKTL--QEVTGNNsIITADYKGITEQHWKIQHIGggQYRISSAGRGWNWNWWmGF-----GTVGW 591 7899**********..5666665599999666566*******9999******9854444444444.....46777 PP CBM13.hmm 76 ytcngganQqWrlesvgsgyykirnrasgkcLdvkggadgtpvqqwdcngganQqWsvlksdl 138 + g++ + ++++g+gyy+i+ + +g L++++ +d +++ + +gganQqW++l +++ ANV77642.1|CBM13|CBM6|CBM62|GH5_34 592 WGT--GSSTCFIISPTGDGYYRIVLVGDGTNLQISS-GDPSKIEGKAFHGGANQQWAILPVSA 651 774..55689*************************6.5668899999*********9987665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (948 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 45.38 // Query: ADU75836.1|CBM13|CBM6|CBM62|GH5_34 [L=948] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.1e-10 27.3 2.3 2.1e-10 27.3 2.3 3.1 3 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.2 0.0 0.12 0.12 105 123 .. 129 148 .. 117 170 .. 0.65 2 ! 12.7 2.3 6.5e-06 6.5e-06 45 100 .. 522 573 .. 442 578 .. 0.72 3 ! 27.3 2.3 2.1e-10 2.1e-10 5 138 .. 524 651 .. 520 676 .. 0.79 Alignments for each domain: == domain 1 score: -1.2 bits; conditional E-value: 0.12 CBM13.hmm 105 kcLdvkgg.adgtpvqqwdc 123 +++++ +g ++g+ + qw++ ADU75836.1|CBM13|CBM6|CBM62|GH5_34 129 LVITIGNGaNNGNHNAQWAR 148 44555544555777777776 PP == domain 2 score: 12.7 bits; conditional E-value: 6.5e-06 CBM13.hmm 45 sdgtirlenhqsgkcLd.vaasstaagaevqqytcngganQqWrlesvgsgyykirn 100 +dgt+++ n+ +gk L+ v+ + +++ ++ g + Q+W++++ g+g+y+i + ADU75836.1|CBM13|CBM6|CBM62|GH5_34 522 PDGTYKFLNRANGKTLQeVT-----GNNSIITADYKGITEQHWKIQHIGGGQYRISS 573 67789999999889998663.....23346666675668999999888899999866 PP == domain 3 score: 27.3 bits; conditional E-value: 2.1e-10 CBM13.hmm 5 gtyrlvnvnsgkclggstaagan.vqlwdccnganQqWtltsdg..tirlenhqsgkcLdva.asstaagaevqq 75 gty++ n+++gk l ++ +g+n ++++d+++ ++Q W++++ g ++r+ ++ g + ++ ++v ADU75836.1|CBM13|CBM6|CBM62|GH5_34 524 GTYKFLNRANGKTL--QEVTGNNsIITADYKGITEQHWKIQHIGggQYRISSAGRGWNWNWWmGF-----GTVGW 591 7899**********..5666665599999666566*******9999******9854444444444.....46777 PP CBM13.hmm 76 ytcngganQqWrlesvgsgyykirnrasgkcLdvkggadgtpvqqwdcngganQqWsvlksdl 138 + g++ + ++++g+gyy+i+ + +g L++++ +d +++ + +gganQqW++l +++ ADU75836.1|CBM13|CBM6|CBM62|GH5_34 592 WGT--GSSTCFIISPTGDGYYRIVLVGDGTNLQISS-GDPSKIEGKAFHGGANQQWAILPVSA 651 774..55689*************************6.5668899999*********9987665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (948 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 46.04 // Query: ABN53395.1|CBM13|CBM6|CBM62|GH5_34|3.2.1.- [L=948] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-10 28.0 5.7 2.4e-10 27.1 2.4 2.9 3 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.2 0.0 0.12 0.12 105 123 .. 129 148 .. 117 170 .. 0.65 2 ! 13.3 1.5 4.2e-06 4.2e-06 45 100 .. 522 573 .. 449 579 .. 0.79 3 ! 27.1 2.4 2.4e-10 2.4e-10 5 138 .. 524 651 .. 520 676 .. 0.79 Alignments for each domain: == domain 1 score: -1.2 bits; conditional E-value: 0.12 CBM13.hmm 105 kcLdvkgg.adgtpvqqwdc 123 +++++ +g ++g+ + qw++ ABN53395.1|CBM13|CBM6|CBM62|GH5_34|3.2.1.- 129 LVITIGNGaNNGNHNAQWAR 148 44555544555777777776 PP == domain 2 score: 13.3 bits; conditional E-value: 4.2e-06 CBM13.hmm 45 sdgtirlenhqsgkcLd.vaasstaagaevqqytcngganQqWrlesvgsgyykirn 100 +dgt+++ n+ +gk L+ v+ + +++ ++ g + Q+W++++ g+g+y+i + ABN53395.1|CBM13|CBM6|CBM62|GH5_34|3.2.1.- 522 PDGTYKFLNRANGKTLQeVT-----GNNSIITADYKGITEQHWKIQHIGGGQYRISS 573 67899999999999999663.....23346667776669999999988999999976 PP == domain 3 score: 27.1 bits; conditional E-value: 2.4e-10 CBM13.hmm 5 gtyrlvnvnsgkclggstaagan.vqlwdccnganQqWtltsdg..tirlenhqsgkcLdva.asst 67 gty++ n+++gk l ++ +g+n ++++d+++ ++Q W++++ g ++r+ ++ g + ++ ABN53395.1|CBM13|CBM6|CBM62|GH5_34|3.2.1.- 524 GTYKFLNRANGKTL--QEVTGNNsIITADYKGITEQHWKIQHIGggQYRISSAGRGWNWNWWmGF-- 586 7899**********..5666665599999666566*******9999******9854444444444.. PP CBM13.hmm 68 aagaevqqytcngganQqWrlesvgsgyykirnrasgkcLdvkggadgtpvqqwdcngganQqWsvl 134 ++v + g++ + ++++g+gyy+i+ + +g L++++ +d +++ + +gganQqW++l ABN53395.1|CBM13|CBM6|CBM62|GH5_34|3.2.1.- 587 ---GTVGWWGT--GSSTCFIISPTGDGYYRIVLVGDGTNLQISS-GDPSKIEGKAFHGGANQQWAIL 647 ...46777774..55689*************************6.5668899999*********998 PP CBM13.hmm 135 ksdl 138 +++ ABN53395.1|CBM13|CBM6|CBM62|GH5_34|3.2.1.- 648 PVSA 651 7665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (948 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 49.78 // Query: QDV79729.1|CBM13|CBM35|CBM6|GH5|GH98 [L=2835] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.8e-11 30.8 1.3 5.9e-10 25.9 0.4 3.1 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.6 0.0 0.016 0.016 93 134 .. 2142 2186 .. 2124 2209 .. 0.62 2 ! 25.9 0.4 5.9e-10 5.9e-10 4 135 .. 2225 2367 .. 2222 2373 .. 0.72 Alignments for each domain: == domain 1 score: 1.6 bits; conditional E-value: 0.016 CBM13.hmm 93 sgyykirnr..as.gkcLdvkgg.adgtpvqqwdcngganQqWsvl 134 gyy++r r +s g ++ v +d t v q + +gg nQ+W+ QDV79729.1|CBM13|CBM35|CBM6|GH5|GH98 2142 PGYYTLRLRtaSSvGGAVRVLMHdDDKTGVWQLPATGG-NQNWTTV 2186 56666655432445555555533455666777775444.4777544 PP == domain 2 score: 25.9 bits; conditional E-value: 5.9e-10 CBM13.hmm 4 egtyrlvnvnsgkclggstaagan.vqlwdccnganQqWtltsdg..tirlenhq.sgkcLdv....a.as 65 +g+y+l+n+nsg+ l+ t++g+ v++++++++++ qW+l++ g ++ + n+ s+ ++ a + QDV79729.1|CBM13|CBM35|CBM6|GH5|GH98 2225 NGVYKLINRNSGLALERGTSQGSDvVVQNEYTGSTSEQWSLVHRGagQYSILNVGaSN--WSWsntyApVF 2293 5789***********888999998688888656677******9999999999999774..33311222344 PP CBM13.hmm 66 staagaev..qqytcngganQqWrlesvgsgyykirnrasgkcLdvkgg.ad.gtpvqqwdcngganQqWs 132 s++ ++ + + +++++ ++ l++ ++g + i+ + +g ++ +gg + g q + +++a QqW+ QDV79729.1|CBM13|CBM35|CBM6|GH5|GH98 2294 SQQGSDPLglTPWGFDNASARRFVLSPADDGFFNIVVVDQGYSVGMAGGsTVvGDFAQFLETSNDAAQQWA 2364 4444444411444445668899***9999********999*******88633232233333344677***8 PP CBM13.hmm 133 vlk 135 + + QDV79729.1|CBM13|CBM35|CBM6|GH5|GH98 2365 IVA 2367 765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (2835 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 193.34 // Query: QDV75083.1|CBM13|CBM35|CBM6|GH5|GH98 [L=2839] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.9e-11 30.7 1.3 5.9e-10 25.9 0.4 3.1 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.6 0.0 0.016 0.016 93 134 .. 2146 2190 .. 2128 2213 .. 0.62 2 ! 25.9 0.4 5.9e-10 5.9e-10 4 135 .. 2229 2371 .. 2226 2377 .. 0.72 Alignments for each domain: == domain 1 score: 1.6 bits; conditional E-value: 0.016 CBM13.hmm 93 sgyykirnr..as.gkcLdvkgg.adgtpvqqwdcngganQqWsvl 134 gyy++r r +s g ++ v +d t v q + +gg nQ+W+ QDV75083.1|CBM13|CBM35|CBM6|GH5|GH98 2146 PGYYTLRLRtaSSvGGAVRVLMHdDDKTGVWQLPATGG-NQNWTTV 2190 56666655432445555555533455666777775444.4777544 PP == domain 2 score: 25.9 bits; conditional E-value: 5.9e-10 CBM13.hmm 4 egtyrlvnvnsgkclggstaagan.vqlwdccnganQqWtltsdg..tirlenhq.sgkcLdv....a.as 65 +g+y+l+n+nsg+ l+ t++g+ v++++++++++ qW+l++ g ++ + n+ s+ ++ a + QDV75083.1|CBM13|CBM35|CBM6|GH5|GH98 2229 NGVYKLINRNSGLALERGTSQGSDvVVQNEYTGSTSEQWSLVHRGagQYSILNVGaSN--WSWsntyApVF 2297 5789***********888999998688888656677******9999999999999774..33311222344 PP CBM13.hmm 66 staagaev..qqytcngganQqWrlesvgsgyykirnrasgkcLdvkgg.ad.gtpvqqwdcngganQqWs 132 s++ ++ + + +++++ ++ l++ ++g + i+ + +g ++ +gg + g q + +++a QqW+ QDV75083.1|CBM13|CBM35|CBM6|GH5|GH98 2298 SQQGSDPLglTPWGFDNASARRFVLSPADDGFFNIVVVDQGYSVGMAGGsTVvGDFAQFLETSNDAAQQWA 2368 4444444411444445668899***9999********999*******88633232233333344677***8 PP CBM13.hmm 133 vlk 135 + + QDV75083.1|CBM13|CBM35|CBM6|GH5|GH98 2369 IVA 2371 765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (2839 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 180.02 // Query: AHF89581.1|CBM13|CBM6|GH5_34 [L=1084] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.1e-39 122.8 18.9 2.4e-31 95.6 7.8 2.1 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.3 3.3 5.4e-15 5.4e-15 71 136 .. 466 539 .. 404 542 .. 0.75 2 ! 95.6 7.8 2.4e-31 2.4e-31 4 136 .. 494 634 .. 490 642 .. 0.91 Alignments for each domain: == domain 1 score: 42.3 bits; conditional E-value: 5.4e-15 CBM13.hmm 71 aevqqytcngganQqW.rlesvg.....sgyykirnrasgkcLdvkgg..adgtpvqqwdcngganQqWsvlks 136 ++ t +g n W ++ +v+ +g+yki+nr+sgk++dv ++ a+g+++qqw + g+ nQqW +++ AHF89581.1|CBM13|CBM6|GH5_34 466 QILRFETIASGFNLNWiEFVPVAsglvaNGTYKIVNRNSGKAMDVVNAstANGAKIQQWGYAGTGNQQWVFTHR 539 455666666677777877877754566689****************889999******************9986 PP == domain 2 score: 95.6 bits; conditional E-value: 2.4e-31 CBM13.hmm 4 egtyrlvnvnsgkcl...ggstaaganvqlwdccnganQqWtltsdg..tirlenhqsgkcLdvaassta.agaevqqytc 78 +gty++vn+nsgk + ++sta+ga++q+w + +++nQqW +t+ g +++++++q+gk+ d aa+ +g ++q+y+ AHF89581.1|CBM13|CBM6|GH5_34 494 NGTYKIVNRNSGKAMdvvNASTANGAKIQQWGYAGTGNQQWVFTHRGanQYTITSAQTGKAIDQAAGL-VlSGDHIQMYSL 573 689*************999999**********777888*******************99****65555.25*********7 PP CBM13.hmm 79 ngg.anQqWrlesvgsgyykirnrasgkcLdvkgg..adgtpvqqwdcngganQqWsvlks 136 n++ anQ+W +++sgyyk++++++g++L v+ + a+g++++q++ +g + QqW+v ++ AHF89581.1|CBM13|CBM6|GH5_34 574 NSSsANQRWIPVPTDSGYYKLVSANTGLVLVVADSstANGARIIQQEFSGLPGQQWQVAAP 634 7667*******9999********999*******7789*******************98765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1084 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 61.35 // Query: EDY84333.1|CBM13|CBM6|GH43_10|GH5_34 [L=1507] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.2e-14 39.8 2.9 8.4e-14 38.4 0.1 2.5 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.7 0.3 0.03 0.03 29 55 .. 331 357 .. 310 376 .. 0.58 2 ! 38.4 0.1 8.4e-14 8.4e-14 4 139 .. 994 1131 .. 966 1152 .. 0.85 Alignments for each domain: == domain 1 score: 0.7 bits; conditional E-value: 0.03 CBM13.hmm 29 qlwdccngan.QqWtltsdg.tirlenhq 55 ++w+ +n + +W+lt + +rl+ q EDY84333.1|CBM13|CBM6|GH43_10|GH5_34 331 WQWN-HN-PDdSKWSLTERSgFLRLRPLQ 357 2444.34.333777777665466666666 PP == domain 2 score: 38.4 bits; conditional E-value: 8.4e-14 CBM13.hmm 4 egtyrlvnvnsgkclggstaagan.vqlwdccnganQqWtltsdg..tirlenhqsgkcLdva.asstaag 70 +gtyr+vn++sg+ + + g++ ++++d+ + ++QqW++t+ g +r++ ++ L ++ + +++ EDY84333.1|CBM13|CBM6|GH43_10|GH5_34 994 DGTYRFVNRTSGLAI--GVDLGSSeLVQEDYEG-SAQQWEVTHLGagNYRVRWVDQ--SLNWSvGLDHNND 1059 689**********99..3445554499999555.88******99999999999985..7999855555699 PP CBM13.hmm 71 aevqqytcngg.anQqWrlesvgsgyykirnrasg.kcLdvkgg.adgtpvqqwdcngganQqWsvlksdl 138 +v + + n+ n + + + ++gyy++r++ sg ++ + + ++g+ v+q+ +g++ Q W+v+++++ EDY84333.1|CBM13|CBM6|GH43_10|GH5_34 1060 DPVEVVPWNDLlRNRRILIVPSSNGYYRLRSAVSGmTVVPLGASvESGSAVVQYVFDGKSHQYWAVQTEAD 1130 9******9888989999999999***********9566666655999*****************9988776 PP CBM13.hmm 139 k 139 + EDY84333.1|CBM13|CBM6|GH43_10|GH5_34 1131 S 1131 5 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1507 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 147.35 // [ok]