# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA7/fasta_for_each_cluster/cluster_18.txt # target HMM database: merged_hmms/AA7.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA7/AA7_cluster_18.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 186085|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 [L=487] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-75 241.8 2.9 5.5e-66 210.1 1.2 2.1 2 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 210.1 1.2 5.5e-66 5.5e-66 6 212 .. 54 261 .. 50 283 .. 0.93 2 ! 31.5 0.0 8e-12 8e-12 402 458 .] 426 480 .. 338 480 .. 0.69 Alignments for each domain: == domain 1 score: 210.1 bits; conditional E-value: 5.5e-66 AA7.hmm 6 rwnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslgdg 58 ++n+ Paa+v+p+++d+V+++v +A ++g+ v++RsGGHsy + dg 186085|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 54 PYNLDHPIIPAAVVYPKSPDEVSNVVICAHDAGIAVQPRSGGHSYCL-GGEDG 105 677777889***********************************965.555** PP AA7.hmm 59 glvIDlsrmnkvsvDadtgtatVgaGarlgelyealaaaglaiPaGscptVGv 111 +l +D++ ++++++D +++t+t g+G+ lg+l ++l + +++ G + +G 186085|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 106 ALSVDMKHFKDFDYDSQDQTVTFGPGNHLGDLTDKLKPLDRVMAYGPSRDIGS 158 ***************************************************** PP AA7.hmm 112 gGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLFWAlRGg 164 gGh GG+G+l R++Gl +D+++sa+vVl +G++vta++++n+DLFWA+RG+ 186085|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 159 GGHMTIGGLGVLGRQLGLGADQVISADVVLGNGTQVTATENTNSDLFWAIRGA 211 ***************************************************** PP AA7.hmm 165 GgGnFGvvtsftfktvpvppvvtvftltyp...wedaaavlkawqqwaada 212 G +FG+vtsf +t p+p+ vt f ++ + d+a+ +k+wq+ a+ 186085|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 212 G-FSFGIVTSFNMQTAPAPRDVTQFAYNITagkATDLADTFKQWQRLIAQP 261 *.**********************999999888888889999999887754 PP == domain 2 score: 31.5 bits; conditional E-value: 8e-12 AA7.hmm 402 daattataietiyaavn.............eedpeirnlaaaYygenlaRLsa 441 + + d+++ n+++ Y g+n+ RL + 186085|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 426 V---------------IqeqtgaddsaypgYVDERLPNPQRSYWGDNVPRLEE 463 3...............0333333333344477888889*************** PP AA7.hmm 442 vKakyDPenvFrseqsi 458 +Ka +DP+nvFr+ qsi 186085|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 464 IKAAVDPDNVFRNPQSI 480 ***************98 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (487 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 62.88 // Query: 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 [L=465] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.9e-77 246.8 5.3 2e-74 237.9 5.3 2.1 1 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 237.9 5.3 2e-74 2e-74 7 458 .] 35 463 .. 30 463 .. 0.70 Alignments for each domain: == domain 1 score: 237.9 bits; conditional E-value: 2e-74 AA7.hmm 7 wnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslg..d 57 +n+ + +Paa+ +p+t+++V+ +v +A ang+ v++RsGGHsy++++lg + 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 35 YNLDYSTTPAAVTYPKTPEQVSGVVMCAHANGVAVQARSGGHSYANYGLGgyN 87 7888999********************************************** PP AA7.hmm 58 gglvIDlsrmnkvsvDadtgtatVgaGarlgelyealaaaglaiPaGscptVG 110 g lv+D++++ +++++a+++t+t g+G+rlg+l ++l + ++++ G+ + +G 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 88 GSLVVDMKNFADFNYNAADQTVTFGPGNRLGDLSKKLKPLDRVMSYGVEADIG 140 ***************************************************** PP AA7.hmm 111 vgGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLFWAlRG 163 gGh GG+G l R++Gl++D++vsa+ Vl +G++vtasa++npDLF A+RG 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 141 SGGHMTIGGLGPLGRQFGLAADQIVSAQCVLGNGTIVTASASMNPDLFFAIRG 193 ***************************************************** PP AA7.hmm 164 gGgGnFGvvtsftfktvpvppvvtvftltypwedaaavlkawqqwaadapdel 216 + +F++vt+ft +t p+p +t ++++ + d++a+ ++ q+w + + + 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 194 AA-FSFAIVTEFTMQTAPAPVDITSYQYNITAGDVTAFTNTFQAWQKVVSQPG 245 **.*********************99999997777777666666666333222 PP AA7.hmm 217 tltaelsaapgll.tllklahisagsavvlaaageaaaglvalateapledal 268 ls+ ++ tl++ + g+ +++++a + + + + a+ + ++ 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 246 -----LSRLFSSTvTLTEGTLLIQGTFYGPQSDFDALNLNTIFPA-ADANVHV 292 .....2222221101222222233333444555555555444444.4566666 PP AA7.hmm 269 ekvnaaaaylavqedddalpnagarkylkserkaeladetiasaddlnesean 321 e + +++ +++ + l++a+ +++ k+ ++ ++ +++ 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 293 ESTIIPTLFTELGD---VLLDATGGISMHFYAKSVKTTNKTLMSVE------- 335 66666666665443...44444444333333333332222111111....... PP AA7.hmm 322 krgkaksaaqikaeateiphaalelllnanasp...rgqqsavqidatitaar 371 +++ ++++++ + + + + g+ s + +at+++ r 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 336 ----------ATEAMFSYIKETDKGTPVWLVIWdleGGAISDLSQTATAYWNR 378 ..........1122222222222223333333300034444555555555555 PP AA7.hmm 372 aagiaaavtaveqaasllkaeeqtldtaladaattataietiyaavneedpei 424 +a + ++ + v+ ++++ l++ +++++ a + a+ + d+e+ 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 379 DALYFMQSYVVGLTGEVSATSKSFLEGLSRVVQQQTGA--DESAYPGYVDAEL 429 55555544444444333333333333333333333322..33444458899** PP AA7.hmm 425 rnlaaaYygenlaRLsavKakyDPenvFrseqsi 458 +n+++ Y g n+ RL+++Ka DP+nvFr+ q i 298737|Clael1_GeneCatalog_proteins_20140828.aa.fasta|AA7 430 SNPQKSYWGYNMPRLQRIKAAADPDNVFRNPQTI 463 ******************************9976 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (465 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 28.11 // Query: 189487|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 [L=644] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.2e-71 226.9 4.2 2.8e-61 194.6 1.4 2.1 2 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 194.6 1.4 2.8e-61 2.8e-61 6 217 .. 64 277 .. 60 348 .. 0.85 2 ! 33.2 0.1 2.4e-12 2.4e-12 418 458 .] 577 635 .. 499 635 .. 0.69 Alignments for each domain: == domain 1 score: 194.6 bits; conditional E-value: 2.8e-61 AA7.hmm 6 rwnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslg.. 56 ++n+ + + P aI++ptta++V+a v++Ar++++ v++ sGGH +++f+lg 189487|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 64 IYNLDNVVAPSAIAFPTTAEEVAALVKCARDAKIAVQPLSGGHGFDNFGLGgi 116 68899999********************************************* PP AA7.hmm 57 dgglvIDlsrmnkvsvDadtgtatVgaGarlgelyealaaaglaiPaGscptV 109 +g l I+l+++n+++++ +++t g+G+ lg l e+l a g++ +p++ 189487|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 117 NGSLSINLQNLNSITYNDADQTLCFGTGNLLGALTEQLTAVGRTAVYSFIPSI 169 ***************************************************** PP AA7.hmm 110 GvgGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLFWAlR 162 G gGh+ GG+G lsR+yGl++D++++a+vVladGs+vtas++en+DLF A++ 189487|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 170 GTGGHFTVGGLGPLSRTYGLAADQIIEAQVVLADGSIVTASDDENQDLFFAIK 222 ***************************************************** PP AA7.hmm 163 GgGgGnFGvvtsftfktv.pvppvvtvftltypwedaaavlkawqqwaadapd 214 G+ +FG+vt+ft+kt pv+pv + + ++++ a v+++wq ++ + 189487|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 223 GAA-WSFGIVTRFTIKTRdPVQPVPYSYIVPGNFSTSAGVVAGWQGLISQKNL 274 ***.*************8356666665777777************99885544 PP AA7.hmm 215 elt 217 + 189487|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 275 SRS 277 443 PP == domain 2 score: 33.2 bits; conditional E-value: 2.4e-12 AA7.hmm 418 n..................eedpeirnlaaaYygenlaRLsavKakyDPenvF 452 + + d+++++ ++aY g+n++RL+++Ka++DP+nvF 189487|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 577 LneaaknatpgvddsaypgYVDKSLHDAQTAYWGDNVERLQKIKAELDPDNVF 629 033345555555566666699999***************************** PP AA7.hmm 453 rseqsi 458 r+ qsi 189487|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 630 RNPQSI 635 ****98 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (644 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 91.57 // Query: 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 [L=527] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.4e-80 256.6 0.9 6.9e-79 252.6 0.9 2.0 1 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 252.6 0.9 6.9e-79 6.9e-79 5 457 .. 52 481 .. 48 482 .. 0.84 Alignments for each domain: == domain 1 score: 252.6 bits; conditional E-value: 6.9e-79 AA7.hmm 5 lrwnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslg 56 +++n+ PaaI+ p+t+++V++av++A +g+ v++RsGGHsy++++lg 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 52 TPYNLDYLNIPAAIISPKTQQQVSQAVKCAHTAGVAVQARSGGHSYANYGLG 103 5677788889****************************************** PP AA7.hmm 57 ..dgglvIDlsrmnkvsvDadtgtatVgaGarlgelyealaaaglaiPaGsc 106 +g lv ++++m ++s++++++t+t g+G+ lg+l ++l++ g+++ G + 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 104 gfNGSLVMNMKNMGAFSYNETDQTVTFGPGNLLGNLSQKLQPLGRVMAYGEV 155 **************************************************** PP AA7.hmm 107 ptVGvgGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLF 158 +G gGh GG+G lsR++Gl+ D++vsa+ V+a+Gs+vtasa++npDLF 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 156 DVIGSGGHMTIGGLGTLSRQLGLATDQIVSAQCVVANGSIVTASASTNPDLF 207 **************************************************** PP AA7.hmm 159 WAlRGgGgGnFGvvtsftfktvpvppvvtvftltyp...wedaaavlkawqq 207 A+RG+G +F++vt+ft kt p+p+++t + ++ + ++++ +++wq+ 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 208 FAIRGAG-FSFAIVTEFTMKTAPAPSEITQYAYNITardTTSFTSTFQGWQT 258 *******.*********************8766666779999********** PP AA7.hmm 208 waadapdeltltaelsaapglltllklahisagsavvlaaageaaaglvala 259 +++ + +++ +++ ++g++ + ++ ++ ++l+++ ++ +a+ 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 259 LVSQPNLSRQFSSTVTLSQGSMIINGIFYGPRSEFDALDTKSIMPTNSSAVS 310 *998888888888888888888555555555555555555444444444444 PP AA7.hmm 260 teapledalekvnaaaaylavqedddalpnagarkylkserkaeladetias 311 + + + +v+++ ++ ++ ++p + k++k+++k ++eti+ 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 311 A----QSTVVTVPFMGLGDPTLTATGSFPLHFYAKSVKTTNKTLMSNETIQL 358 4....55788888998888999999999999999999999999999988888 PP AA7.hmm 312 addlneseankrgkaksaaqikaeateiphaalelllnanasprgqqsavqi 363 + + +ate ++ + +++ ++ g+ s v+ 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 359 MFSYI------------------NATEKGSPVWLVIWDLE---GGAISDVSQ 389 87772..................22333333333333333...577888899 PP AA7.hmm 364 datitaaraagiaaavtaveqaasllkaeeqtldtaladaattataietiya 415 +at++++r+a + ++ + v+ + + +++ l++ +++ + a +++ 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 390 TATAYWHRDALYFMQSYVVSLTEPVIDVSKSFLAGLSLLVQNETGADQSA-- 439 99999999999999888888887777777777777766665555555544.. PP AA7.hmm 416 avneedpeirnlaaaYygenlaRLsavKakyDPenvFrseqs 457 + + dpe+ ++++ Y g n+ RL++vKa +DP+nvFr+ q 446822|Altalt1_GeneCatalog_proteins_20170627.aa.fasta|AA7 440 YPGYVDPELGDPQRSYWGCNVPRLQTVKAALDPDNVFRNPQT 481 44578999999***************************9985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (527 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 35.17 // Query: 326418|Altro1_GeneCatalog_proteins_20180320.aa.fasta|AA7 [L=522] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.8e-81 260.5 2.4 2.9e-70 224.2 1.4 2.1 2 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 224.2 1.4 2.9e-70 2.9e-70 5 230 .. 52 281 .. 48 305 .. 0.91 2 ! 35.5 0.0 5.1e-13 5.1e-13 363 458 .] 389 481 .. 347 481 .. 0.66 Alignments for each domain: == domain 1 score: 224.2 bits; conditional E-value: 2.9e-70 AA7.hmm 5 lrwnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslg. 56 ++n++ + PaaI +p+t+++V+++v++A +g+ v++RsGGHsy++++lg 326418|Altro1_GeneCatalog_proteins_20180320.aa.fasta|AA7 52 HPYNLNYNTVPAAISFPKTQEQVSEVVKCAHTAGVAVQARSGGHSYANYALGg 104 57999************************************************ PP AA7.hmm 57 .dgglvIDlsrmnkvsvDadtgtatVgaGarlgelyealaaaglaiPaGscpt 108 +g lv+D+++m ++ +++d+ t+t g+G+ lg++ e+l + ++++ G ++ 326418|Altro1_GeneCatalog_proteins_20180320.aa.fasta|AA7 105 sNGSLVVDMKNMASFAYNEDDHTVTFGPGNLLGNISEKLLPLKRVMAYGEVAV 157 9999************************************************* PP AA7.hmm 109 VGvgGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLFWAl 161 +G gGh+ GG+G lsR++G +D++vsa+ Vla+G++vtasa++npDLF A+ 326418|Altro1_GeneCatalog_proteins_20180320.aa.fasta|AA7 158 IGTGGHLTIGGLGTLSRQLGVGADQIVSAQCVLANGTAVTASASTNPDLFFAI 210 ***************************************************** PP AA7.hmm 162 RGgGgGnFGvvtsftfktvpvppvvtvftltyp...wedaaavlkawqqwaad 211 RG+G +F++vt+ft kt p+p ++t + +t +++a+ ++awq++ + 326418|Altro1_GeneCatalog_proteins_20180320.aa.fasta|AA7 211 RGAG-FSFAIVTEFTMKTAPAPTEITKYAYTIAaddANSFASTFQAWQKFGTQ 262 ****.*********************8877777778888999999***99876 PP AA7.hmm 212 apdeltltaelsaapgllt 230 + + +++ +++ ++g++ 326418|Altro1_GeneCatalog_proteins_20180320.aa.fasta|AA7 263 RNLDRRFSSTMTLSQGSMV 281 6655555555566555554 PP == domain 2 score: 35.5 bits; conditional E-value: 5.1e-13 AA7.hmm 363 idatitaaraagiaaavtaveqaasllkaeeqtldtaladaattataietiya 415 +at++++r+a + ++ + v+ ++a+++ l + ++++ + a 326418|Altro1_GeneCatalog_proteins_20180320.aa.fasta|AA7 389 QTATAYWHRDAAYFMQSYVVNLGGPVTDASKKFLSGLSSL---VQKETCDQSA 438 3334444444444443333333333333333333332222...2233333344 PP AA7.hmm 416 avneedpeirnlaaaYygenlaRLsavKakyDPenvFrseqsi 458 + + dpe+ ++++ Y g n++RL+++Ka +DP+nvFr+ qs+ 326418|Altro1_GeneCatalog_proteins_20180320.aa.fasta|AA7 439 YPGYVDPELAHPQQSYWGGNVQRLQQIKAAVDPDNVFRNPQSV 481 44599***********************************996 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (522 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 121.21 // Query: UJO23499.1|AA7 [L=489] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-78 250.7 3.0 1e-68 219.1 1.3 2.1 2 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 219.1 1.3 1e-68 1e-68 6 212 .. 54 264 .. 50 286 .. 0.94 2 ! 31.5 0.0 8.1e-12 8.1e-12 402 458 .] 429 483 .. 341 483 .. 0.69 Alignments for each domain: == domain 1 score: 219.1 bits; conditional E-value: 1e-68 AA7.hmm 6 rwnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslg..dgglvIDlsrmnkvsvDadtgtatVgaGarlgelyealaaag 98 ++n+ Paa+v+p+++d+V+++v +A ++g+ v++RsGGHsy +++lg dg+l +D++ ++++++D +++t+t g+G+ lg+l ++l + UJO23499.1|AA7 54 PYNLDHPIIPAAVVYPKSPDEVSNVVICAHDAGIAVQPRSGGHSYCNYGLGgeDGALSVDMKHFKDFDYDSQDQTVTFGPGNHLGDLTDKLKPLD 148 677777889*******************************************9999*************************************** PP AA7.hmm 99 laiPaGscptVGvgGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLFWAlRGgGgGnFGvvtsftfktvpvppvvtvftlty 193 +++ G + +G gGh GG+G+l R++Gl +D+++sa+vVl +G++vta++++n+DLFWA+RG+G +FG+vtsf +t p+p+ vt f ++ UJO23499.1|AA7 149 RVMAYGPSRDIGSGGHMTIGGLGVLGRQLGLGADQVISADVVLGNGTQVTATENTNSDLFWAIRGAG-FSFGIVTSFNMQTAPAPRDVTQFAYNI 242 *******************************************************************.**********************99999 PP AA7.hmm 194 p...wedaaavlkawqqwaada 212 + d+a+ +k+wq+ a+ UJO23499.1|AA7 243 TagkATDLADTFKQWQRLIAQP 264 9888888889999999887754 PP == domain 2 score: 31.5 bits; conditional E-value: 8.1e-12 AA7.hmm 402 daattataietiyaavn.............eedpeirnlaaaYygenlaRLsavKakyDPenvFrseqsi 458 + + d+++ n+++ Y g+n+ RL ++Ka +DP+nvFr+ qsi UJO23499.1|AA7 429 V---------------IqeqtgaddsaypgYVDERLPNPQRSYWGDNVPRLEEIKAAVDPDNVFRNPQSI 483 3...............0333333333344477888889******************************98 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (489 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 117.37 // Query: 186736|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 [L=568] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.9e-76 243.5 0.2 1.6e-65 208.6 0.1 2.1 2 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 208.6 0.1 1.6e-65 1.6e-65 6 210 .. 119 327 .. 115 351 .. 0.92 2 ! 33.2 0.0 2.6e-12 2.6e-12 360 458 .] 454 551 .. 402 551 .. 0.82 Alignments for each domain: == domain 1 score: 208.6 bits; conditional E-value: 1.6e-65 AA7.hmm 6 rwnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslg.. 56 ++n+ ++PaaIv+p++a++V+aav +A + ++ v+ RsGGHsy +++lg 186736|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 119 PYNLDYPVTPAAIVYPENAQQVRAAVVCAHKYDIAVQSRSGGHSYCNHGLGgk 171 7899999*********************************************9 PP AA7.hmm 57 dgglvIDlsrmnkvsvDadtgtatVgaGarlgelyealaaaglaiPaGscptV 109 dg l ID ++m+++s++++++t+t ++G+rlg+l++ la++g++ G ++ + 186736|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 172 DGSLSIDYQNMKSFSYNPQDQTMTFEPGNRLGDLDRHLAPTGRVAAYGQVSDI 224 999************************************************** PP AA7.hmm 110 GvgGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLFWAlR 162 G gGh+ GG+G lsR++Gl++D++vs+e VladG+++tas+ +npDLF A++ 186736|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 225 GSGGHFTIGGLGPLSRLLGLAADQIVSVECVLADGTITTASNRQNPDLFFAIK 277 ***************************************************** PP AA7.hmm 163 GgGgGnFGvvtsftfktvpvppvvtvftltyp...wedaaavlkawqqwaa 210 G+ +F+ +tsf+++t + p v+ f+++ + +d+a+ + +wq+ + 186736|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 278 GAA-WSFATITSFQVATSAPPTSVISFQYNITfgqIADLAETFIQWQDLIS 327 ***.**************999999999999995566666666666666554 PP == domain 2 score: 33.2 bits; conditional E-value: 2.6e-12 AA7.hmm 360 avqidatitaaraagiaaavtaveqaasllkaeeqtldtaladaattataiet 412 v+ at++++r+a + ++++ v+ + ++ +++ t l++ ++++ + 186736|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 454 DVPQAATAYWHRDALYFQQAYVVNPI-GPVTRQSHEFLTGLTEETQRLAPSID 505 45666778888888888888888777.55566666666666666666666666 PP AA7.hmm 413 iyaavneedpeirnlaaaYygenlaRLsavKakyDPenvFrseqsi 458 a+ + d+e++++ +aY g n++RL+++K +yDP+ vFr+ qsi 186736|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 506 DSAYPGYVDAELKDPLTAYWGGNVERLVQIKGEYDPDDVFRNPQSI 551 678888**************************************98 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (568 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 130.99 // Query: 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 [L=556] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.5e-74 236.7 7.0 6.2e-73 233.0 7.0 2.0 1 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 233.0 7.0 6.2e-73 6.2e-73 7 451 .. 58 483 .. 53 488 .. 0.74 Alignments for each domain: == domain 1 score: 233.0 bits; conditional E-value: 6.2e-73 AA7.hmm 7 wnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslg..d 57 +n+ + + Paa+v+p+ta V+++v++A ++g+ v++RsGGH y +++lg d 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 58 YNLDLPYLPAAVVYPRTAGGVAKVVKCAGDHGIGVQARSGGHGYRNYCLGgaD 110 789999*********************************************** PP AA7.hmm 58 gglvIDlsrmnkvsvDadtgtatVgaGarlgelyealaaaglaiPaGscptVG 110 g+lv+D+++m++++++ d+ tat gaG+rlg+l ++l g+ G+++ VG 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 111 GALVVDMKNMKHFQYNSDDTTATFGAGNRLGDLTRELDSVGRSAAYGVVSDVG 163 ***************************************************** PP AA7.hmm 111 vgGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLFWAlRG 163 gGh+ GG+G lsR++G +D+++sa+ Vla+G++vt s e +pDLF A+RG 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 164 TGGHLTIGGLGPLSRQLGAGLDQIISAQAVLANGTIVTTSLESHPDLFFAIRG 216 ***************************************************** PP AA7.hmm 164 gGgGnFGvvtsftfktvpvppvvtvftltyp.wedaaavlkawqqwaadapde 215 + +F+ vt+ft++tvp+p+vv+ ft++++ +d+ ++ +w++w + + d 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 217 AA-ASFALVTEFTIRTVPAPEVVS-FTYNVTiAKDIVDLAPTWKAWQDYVSDP 267 **.*********************.7777777666666666666666666554 PP AA7.hmm 216 ltltaelsaapglltllklahisagsavvlaaageaaaglvalateapledal 268 +++ + + +tl + + i +g++ ++++ + ++ +a+ ++ + ++ 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 268 DLSRLFACT----FTLASNVLILEGTYYGSRSDFDTLDIESIFAPAKDAGLQI 316 444443333....3444444444555555555566666666665555555555 PP AA7.hmm 269 ekvnaaaaylavqedddalpnagarkylkserkaeladetiasaddlnesean 321 + +++a a q++ ++ ++++ + ++ k +++t ++d++ 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 317 KSDIVVTAANALQQAALSFFGRIPTHFYAKSLK--FTNNTLLTLDQV------ 361 554444444455555555554444444333322..222333333333...... PP AA7.hmm 322 krgkaksaaqikaeateiphaalelllnanaspr.gqqsavqidatitaaraa 373 i+ ++ ++++ +l++ + + + g++s + ++t++++r+a 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 362 ----------IGMFQYISAKPKGSLVWFIIWDLTgGAVSDPDPTSTAYWHRDA 404 ..........3333333333444444433333330445566677788888888 PP AA7.hmm 374 giaaavtaveqaasll.kaeeqtldtaladaattataietiyaavneedpeir 425 + ++ + v a + ++ ++ + l + ++ + + a+ + d +++ 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 405 LFWQQSYIVDLTAIREvNQVSKDFLIGLNARVRELEPRINESAYPGYVDDQLE 457 7777766666665443033334444445555666777778888888******* PP AA7.hmm 426 nlaaaYygenlaRLsavKakyDPenv 451 ++++aY g n++RL+++K+ yDP + 190064|Clafu1_GeneCatalog_proteins_20110826.aa.fasta|AA7 458 DPQRAYWGGNVERLREIKRVYDPGML 483 ***********************866 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (556 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.01s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 37.16 // Query: USW59419.1|AA7 [L=521] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.3e-72 230.6 0.1 7.6e-64 203.0 0.1 2.0 2 AA7.hmm Domain annotation for each model (and alignments): >> AA7.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 203.0 0.1 7.6e-64 7.6e-64 4 224 .. 80 304 .. 78 338 .. 0.93 2 ! 25.8 0.0 4.5e-10 4.5e-10 365 458 .] 423 515 .. 387 515 .. 0.77 Alignments for each domain: == domain 1 score: 203.0 bits; conditional E-value: 7.6e-64 AA7.hmm 4 rlrwnrrverkPaaIvvpttadDVqaavrfAranglkvavRsGGHsyegfslg..dgglvIDlsrmnkvsvDadtgtatVgaGarlgelyealaa 96 + ++n+ +PaaIv+p+++ DV+++v +A+ g+ v+++sGGHsy +f++g dg l +Dl+ m++++++++++t+t g+G++l++l++ laa USW59419.1|AA7 80 NHPYNLDYPWTPAAIVYPRNTIDVSKVVVCASTYGIAVQPKSGGHSYCNFGYGgqDGSLAVDLQHMDDFNYNPADQTVTFGPGNKLADLDRHLAA 174 6678999999********************************************9999************************************* PP AA7.hmm 97 aglaiPaGscptVGvgGhtlGGGyGllsRkyGltcDnlvsaevVladGslvtasaeenpDLFWAlRGgGgGnFGvvtsftfktvpvppvvtvftl 191 +++ G++ +G gG + GG+G lsR++Gl+ D+++s+e Vl dGs+v+asa enpDLF A+RG+ +F++ t+ + +t p p++++ f++ USW59419.1|AA7 175 IDRVMAYGVVGDIGTGGQIAIGGLGPLSRLLGLASDQVISVECVLGDGSIVRASAYENPDLFFAIRGAA-WSFCIMTEIQMQTSPSPSAAIEFQY 268 *********************************************************************.*********************9999 PP AA7.hmm 192 typ...wedaaavlkawqqwaadapdeltltaelsa 224 + + +d+a +k+wqq ad ++a+l+ USW59419.1|AA7 269 NITvgrYADLAGTFKKWQQLIADPSLSRHFAATLTL 304 9999999************99875444444444433 PP == domain 2 score: 25.8 bits; conditional E-value: 4.5e-10 AA7.hmm 365 atitaaraagiaaavtaveqaasllkaeeqtldtaladaattataietiyaavneedpeirnlaaaYygenlaRLsavKakyDPenvFrseqsi 458 at++++r+a + ++++ v+ + ++a+++ + l + ++++ + a++ + d+ + ++ +aY g n+aRL+++K yDP n Fr+ qsi USW59419.1|AA7 423 ATAYWHRDALHFQQAYVVSPF-GPVSAASHEFLVGLNRLCRQLNPGIDESAYAGYVDAALLDPLTAYWGGNVARLIQIKGVYDPWNTFRNPQSI 515 455555555555555555555.555555555555555555556666666777779999**********************************98 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (521 residues searched) Target model(s): 1 (458 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 123.12 // [ok]