# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA3/fasta_for_each_cluster/cluster_77.txt # target HMM database: merged_hmms/AA3.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA3/AA3_cluster_77.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 [L=572] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.6e-100 323.3 0.0 1.2e-99 322.8 0.0 1.1 1 AA3_2.hmm 2e-60 193.2 0.0 2.6e-60 192.7 0.0 1.0 1 AA3.hmm 4.4e-43 136.0 0.0 1.2e-33 104.8 0.0 2.2 2 AA3_1.hmm 4.9e-37 115.8 0.0 2.1e-29 90.6 0.0 3.1 3 AA3_3.hmm 1.8e-13 38.7 0.0 7.1e-07 16.9 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 322.8 0.0 1.2e-99 1.2e-99 4 563 .. 30 560 .. 30 563 .. 0.85 Alignments for each domain: == domain 1 score: 322.8 bits; conditional E-value: 1.2e-99 AA3_2.hmm 4 DYviVGGGtAGlvvAsrLsedpnvsVlviEaGgdeen.dplidvp 47 D viVGGGtAGl+vA +++ n++V v+EaG+d+++ +p+i+vp 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 30 DVVIVGGGTAGLTVAYEIASRTNLRVRVLEAGDDHTTqNPEIEVP 74 89**********************************966****** PP AA3_2.hmm 48 g.lagsllgseldwnyttepqkglnnrsiklprGkvlGGssaiNa 91 ++ + + ++w++ ++pq++ +n +i+lpr k+lGG+s +N+ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 75 IkEFEVYSNPMWEWGFVSTPQSHSSNVTIPLPRFKGLGGCSQHNG 119 615555566699********************************* PP AA3_2.hmm 92 mlytrgskadydaWaellgnegWswdnllpyfkksetftppdeeq 136 + gs++ yd+W + g++++++ +++ + e + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 120 EGFWLGSQYTYDKWPK-----GFKYRDFHRAVLQEEGCVS----- 154 **************95.....7999998888888888777..... PP AA3_2.hmm 137 deanitydasvhgtsGplkvsfp..eeasplskallealeelGvp 179 + hgt+Gpl++ + +p a+ +a+ ++G++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 155 ------FGLPNHGTTGPLHTLLDplDAIDPYLVAFKAAALQAGYR 193 ......45789********87763355999*************** PP AA3_2.hmm 180 tnkdlnsgdalGvslvpstidpttgtRssaatayldpv.ekrsnl 223 +n+d n+ a+G++ t+++ g+R + ++v + +nl 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 194 FNPDENAPLAKGYMPHVVTYKD--GRRFGPYGVF-KSVrGRLPNL 235 ************7777777777..9999999766.6661566*** PP AA3_2.hmm 224 tvltnatvtkilfdstk.......kkatGVevtk..kdg..kkyt 257 +v +n+tvt +lf + + k+tGV+ + +dg +++t 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 236 RVDLNTTVTGLLFGDGTdrdkkkrLKITGVTADRvgRDGfeRNIT 280 *************988889999999*******9999554337999 PP AA3_2.hmm 258 vkarkEVILsaGainsPqlLmlSGiGpkeeLeklgIpvvvdlpgV 302 + ark V+++aGa+++Pq+Lm+SGiGpk++L+++gI++ dlpgV 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 281 YLARKAVVMAAGAYQTPQILMVSGIGPKDTLRNAGINLRLDLPGV 325 9******************************************** PP AA3_2.hmm 303 GenLqDhllvpvsfevke.pletldellsdptvaaealaeylank 346 G+ L+Dh +vp ++ + p ++dp++ ae+++ y+a++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 326 GKALKDHYAVPYIINSLQiP------PMNDPAFFAEQAQLYAATQ 364 **********9666555414......3579*************** PP AA3_2.hmm 347 tGpltssvsevlafvklpeilskeeksnlaslaaqeelladedvp 391 tG ++ + ++ +a+ ++ +++ + + dv 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 365 TGYFAWPPADHAAVTASTNGNQQNPF------------VP-VDVV 396 **999887777777762222111111............11.1222 PP AA3_2.hmm 392 dlelvlvplalntaespaegknylsilvvllkplSrGsvklasad 436 + + p+ + p ++n + lvvl++p S G+v+++s + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 397 MVTF---PY----TFFPGFDANQILSLVVLTNPSSSGTVTVSSGS 434 2222...22....2224445789999******************* PP AA3_2.hmm 437 pldkplidpnylsdplDlevlvegvklarkiastkalkelvaeev 481 ++d+p+id ny+sdp+D+ v+ +gv l+r+i++++al+++ +e+ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 435 IYDPPVIDLNYFSDPRDFGVMYKGVDLLRQIFKQPALSQWFGSEI 479 ********************************************* PP AA3_2.hmm 482 apgaevqsdeeleeyireslstvyHpvGTcamgpre.kggVVDse 525 p+ + ++ +++++ t+ Hp+GTc +g+++ +V D + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 480 FPDGA------DNTTLKAQVFTADHPMGTCMIGEDHeTFAVADRD 518 99843......2568999***************9998899***** PP AA3_2.hmm 526 lrVyGvknLRVvDaSvfPll....vsahtqatvyavAekaAd 563 + V+G+++L ++DaS + ++ ++a + tv+ vA+ +A+ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 519 AAVFGTSGLYIADASLIRTVdgatPNASIHGTVILVAKIVAN 560 *****************9872222555555677777776665 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 192.7 0.0 2.6e-60 2.6e-60 87 388 .. 26 549 .. 14 565 .. 0.80 Alignments for each domain: == domain 1 score: 192.7 bits; conditional E-value: 2.6e-60 AA3.hmm 87 keeyDvvivGsGaaGsvlAsrLsea...gvlllEaGeedlnee.. 126 + DvvivG+G+aG+++A++++ +v +lEaG +++++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 26 SKIDDVVIVGGGTAGLTVAYEIASRtnlRVRVLEAGDDHTTQNpe 70 44459******************99***********998775576 PP AA3.hmm 127 .....kkl..ied.evklds...tepq..lngrriilprgkvlGG 158 k++ +++ +++ + ++pq ++ +i lpr k+lGG 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 71 ievpiKEFevYSNpMWE--WgfvSTPQshSSNVTIPLPRFKGLGG 113 55544222222223243..1558888875556666667******* PP AA3.hmm 159 sslinamvylrgqaedfdawaeegegwswddllpyfkkaeell.. 201 +s +n+ +++ g++ +d+w + g +++d+ + + e + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 114 CSQHNGEGFWLGSQYTYDKWPK---GFKYRDFHRAVLQEEGCVsf 155 *****************99964...46666666666555544488 PP AA3.hmm 202 .....................................r....... 202 r 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 156 glpnhgttgplhtlldpldaidpylvafkaaalqagyRfnpdena 200 888888887777777776666666666655555555505566666 PP AA3.hmm 203 ...............rrssaakayldplp.a.pnleiltnarvtk 230 r + ++++ + pnl++ n++vt 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 201 plakgymphvvtykdGRRFGPYGVFKSVRgRlPNLRVDLNTTVTG 245 66677777777778844444555666656469************* PP AA3.hmm 231 ilf..............ag...............tlvaakeVila 246 +lf +g t+ a+k V+ a 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 246 LLFgdgtdrdkkkrlkiTGvtadrvgrdgferniTYLARKAVVMA 290 ***988877776666651155666667777777667********* PP AA3.hmm 247 aGaigspqlLllSgigpaee.eslgipvvvdlp.vgenlq..... 284 aGa+++pq+L+ Sgigp++ +++gi++ dlp vg+ l+ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 291 AGAYQTPQILMVSGIGPKDTlRNAGINLRLDLPgVGKALKdhyav 335 ********************************************* PP AA3.hmm 285 ............................................. 284 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 336 pyiinslqippmndpaffaeqaqlyaatqtgyfawppadhaavta 380 ********************************************* PP AA3.hmm 285 ........................................apks. 288 +p s 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 381 stngnqqnpfvpvdvvmvtfpytffpgfdanqilslvvltNPSSs 425 ***************************************988888 PP AA3.hmm 289 .svrlnssdpldpplidpnylsderdvellvegvr.......... 322 +v+++s +dpp+id ny+sd+rd ++ +gv 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 426 gTVTVSSGSIYDPPVIDLNYFSDPRDFGVMYKGVDllrqifkqpa 470 9999999999**************999999999997777777777 PP AA3.hmm 323 ..........eeetdd......treeiqtiyHpvGtcrmgeddas 351 + d + ++ t+ Hp+Gtc++ged ++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 471 lsqwfgseifP----DgadnttLKAQVFTADHPMGTCMIGEDHET 511 66666654441....0445674555599999***********777 PP AA3.hmm 352 .aVVdpnlrvhgvenLrvvDasvfPtilggnpnltiva 388 aV d + v+g+++L+++Das + t g+ pn++i 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 512 fAVADRDAAVFGTSGLYIADASLIRTVDGATPNASIHG 549 688899******************88777777777644 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.8 0.0 1.2e-10 1.2e-10 8 137 .. 20 146 .. 15 152 .. 0.79 2 ! 104.8 0.0 1.2e-33 1.2e-33 190 541 .. 206 559 .. 184 565 .. 0.78 Alignments for each domain: == domain 1 score: 28.8 bits; conditional E-value: 1.2e-10 AA3_1.hmm 8 aatpvaketyDyivvGaGagGivvAdrLs.eagkkvLLlekGgps 51 +a++++++ D+++vG+G++G++vA ++ ++ +v +le G 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 20 VAAQTRSKIDDVVIVGGGTAGLTVAYEIAsRTNLRVRVLEAGDDH 64 4577888889***************8876489**********999 PP AA3_1.hmm 52 tyatggtekpewlentnltrfDvpg.lcneiladssgvactdtaq 95 t + ++ e+p + ++ ++ + + +++s+ ++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 65 TTQNPEIEVPIK--EFEVYSNPMWEwGFVSTPQSHSSNVTIPLPR 107 999999666643..5566555655532223333355577777778 PP AA3_1.hmm 96 magcvlGGgtavNaglfvkpqasdfddkfpkgwksedvqdaa 137 + g lGG + N f+ ++ +d k+pkg+k+ d++ a+ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 108 FKG--LGGCSQHNGEGFWLGSQYTYD-KWPKGFKYRDFHRAV 146 877..9*******************6.9**********9986 PP == domain 2 score: 104.8 bits; conditional E-value: 1.2e-33 AA3_1.hmm 190 yghppfmisngerggPlatYLpsAkkrsNfklilntkVkrvv... 231 y + +++g+r gP + + +N + lnt+V+ + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 206 YMPHVVTYKDGRRFGPYGVFKSVRGRLPNLRVDLNTTVTGLLfgd 250 6677889*********************************99999 PP AA3_1.hmm 232 ......rsggkvtGVeve..ssgGqrevikvtkggrVilsAGals 268 ++ k+tGV+++ + +G + +i+ + ++V+++AGa + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 251 gtdrdkKKRLKITGVTADrvGRDGFERNITYLARKAVVMAAGAYQ 295 99977666679*******99999999999999************* PP AA3_1.hmm 269 spkiLlrSGigpkdqlevvkasasdgvtliaksdwinlp.vGknl 312 +p+iL+ SGigpkd+l+++ + ++lp vGk l 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 296 TPQILMVSGIGPKDTLRNAGINL----R-------LDLPgVGKAL 329 ****************8776222....2.......45544***** PP AA3_1.hmm 313 kdhpntdlkiktkeisaydfyealtspitedkdlylnqrsGilaq 357 kdh + i++ +i ++ + +e+++ly+ ++G +a 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 330 KDHYAVPYIINSLQIPPMNDP----AFFAEQAQLYAATQTGYFAW 370 **********99998888775....6788999***********98 PP AA3_1.hmm 358 aaqniifweevkgadgr.....vrqlqwtasvegsaaaaknnalt 397 + + + ++ +++ v + t ++ + n + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 371 PPADHAAVTASTNGNQQnpfvpVDVVMVTFPYTFFP-GFDANQIL 414 877764444444444440111134444555544444.56666677 PP AA3_1.hmm 398 vsvyltrgltSrGrleitakg..ntvvskkpylsdaeDkeavaqf 440 v lt+ ++S G++++++ + v + y+sd++D ++ ++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 415 SLVVLTNPSSS-GTVTVSSGSiyDPPVIDLNYFSDPRDFGVMYKG 458 77899*99966.******96656888999**************** PP AA3_1.hmm 441 ienliaalsaasgltlvspasnttvedlvksllvsvakrsanHwm 485 ++ l++ +++ + ++ + d ++ + + + + a+H m 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 459 VDLLRQIFKQPALSQWF---GSEIFPDGADNTTLKAQVFTADHPM 500 **999999996544453...2223333344444466779****** PP AA3_1.hmm 486 gtaklGtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNps 530 gt+ +G+ d++ +v D ++ V+Gt L+++DAS++ ++ ++ p+ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 501 GTCMIGE-DHETFAVADRDAAVFGTSGLYIADASLIRTVDGATPN 544 ******6.59**************************988766666 PP AA3_1.hmm 531 a....iimvaaekaa 541 a +++ +a+ a 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 545 AsihgTVILVAKIVA 559 511223445555555 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 90.6 0.0 2.1e-29 2.1e-29 4 315 .. 30 340 .. 27 376 .. 0.86 2 ! 5.4 0.0 0.0014 0.0014 403 462 .. 409 467 .. 385 478 .. 0.83 3 ! 16.2 0.0 7.5e-07 7.5e-07 516 564 .. 488 537 .. 482 561 .. 0.83 Alignments for each domain: == domain 1 score: 90.6 bits; conditional E-value: 2.1e-29 AA3_3.hmm 4 DviiaGgGtagcvvagRlaeadpnLkvllvegGkn.nlddplvvk 47 Dv+i+GgGtag va +a+ nL+v ++e+G++ ++++p++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 30 DVVIVGGGTAGLTVAYEIAS-RTNLRVRVLEAGDDhTTQNPEIEV 73 9*****************97.579*********8725689***** PP AA3_3.hmm 48 PalflsnlkpesktalfykaekseeldgRelivpaggvlGGGssi 92 P+ + ++ f+++ +s++ ++ ++ p + lGG s 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 74 PIKEFEVYSNPMWEWGFVSTPQSHS-SNVTIPLPRFKGLGGCSQH 117 *999988888877788887777665.577888899999******* PP AA3_3.hmm 93 nflmYtraqasDfdswkteGWsakdllpllkkletyqgkgdeevh 137 n + +++ +d+w +G++ d+ + + e g h 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 118 NGEGFWLGSQYTYDKWP-KGFKYRDFHRAVLQEEGCVSFG-LPNH 160 ****************6.7**********99999987766.557* PP AA3_3.hmm 138 GkeGPikvskGtyts.krveddfleaaeelgipevdDlqdletsn 181 G++GP++ + + f +aa ++g++ D + + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 161 GTTGPLHTLLDPLDAiDPYLVAFKAAALQAGYRFNPDENAPLAKG 205 ******98877665415577889999999****999987766666 PP AA3_3.hmm 182 gveralryvsrdGrRqDaAhaylhpklksgkkpnLhvlveskvsr 226 + +++ y +dGrR +++ ++ g+ pnL v ++++v+ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 206 YMPHVVTY--KDGRRFGPYG--VFKSVR-GRLPNLRVDLNTTVTG 245 66777777..78***86544..455555.489************* PP AA3_3.hmm 227 vlf......enkravgvelvpnkafqkeaksksrtvkarklvvvs 265 +lf ++k+ + v+ ++ ++ +++ t+ ark+vv++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 246 LLFgdgtdrDKKKRLKITGVTADRVGRDGFERNITYLARKAVVMA 290 ***9888777788899999999999999999999*********** PP AA3_3.hmm 266 aGalgtPlvLeRsGiGakevLekagvkvvvdlpgvGenyqDHkll 310 aGa tP++L sGiG k++L++ag+++ dlpgvG+ ++DH+ + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 291 AGAYQTPQILMVSGIGPKDTLRNAGINLRLDLPGVGKALKDHYAV 335 *******************************************98 PP AA3_3.hmm 311 lvpyr 315 ++ + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 336 PYIIN 340 77655 PP == domain 2 score: 5.4 bits; conditional E-value: 0.0014 AA3_3.hmm 403 pekkyltlsaftayPysrGsihitspdpeeeidFetgflkdkaDl 447 ++++ l+l + ++ P s G++ + s ++++++ + +++d++D+ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 409 DANQILSLVV-LTNPSSSGTVTVSSGSIYDPPVIDLNYFSDPRDF 452 5556666655.557******************************* PP AA3_3.hmm 448 kklvwaYkkqReiaR 462 + + R+i++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 453 GVMYKGVDLLRQIFK 467 999988888888876 PP == domain 3 score: 16.2 bits; conditional E-value: 7.5e-07 AA3_3.hmm 516 wvrenvettWhslgtckmap.rekggvvdkkLnvyGvegLkvaDl 559 ++++v t+ h +gtc ++ +e+ +v d++ v+G+ gL +aD 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 488 TLKAQVFTADHPMGTCMIGEdHETFAVADRDAAVFGTSGLYIADA 532 67899*************8625668999***************** PP AA3_3.hmm 560 sivPe 564 s++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 533 SLIRT 537 *9754 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 7.0 0.0 0.00073 0.00073 5 40 .. 30 66 .. 26 105 .. 0.88 2 ! 16.9 0.0 7.1e-07 7.1e-07 229 292 .. 236 318 .. 221 335 .. 0.64 3 ! 11.1 0.1 4e-05 4e-05 467 516 .. 496 546 .. 480 562 .. 0.81 Alignments for each domain: == domain 1 score: 7.0 bits; conditional E-value: 0.00073 AA3_4.hmm 5 dvliaGSGpiGatyArtlvd.aglkvlmveiGaqdsk 40 dv+i+G G G t A +++ ++l+v ++e G+ +++ 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 30 DVVIVGGGTAGLTVAYEIASrTNLRVRVLEAGDDHTT 66 9******************9789*********98774 PP == domain 2 score: 16.9 bits; conditional E-value: 7.1e-07 AA3_4.hmm 229 eLltetrctkl....eldeskek..kieaaevkdLlk....nkdl 263 ++ +t +t l +d++k+k ki+ ++ ++ + ++ + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 236 RVDLNTTVTGLlfgdGTDRDKKKrlKITGVTADRVGRdgfeRNIT 280 555666667663222112222224577777777766655533355 PP AA3_4.hmm 264 lvkakvyviaaGavltpqiLanSgfgke.........k 292 + k++v+aaGa +tpqiL+ Sg+g + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 281 YLARKAVVMAAGAYQTPQILMVSGIGPKdtlrnaginL 318 78889999*****************9865554444443 PP == domain 3 score: 11.1 bits; conditional E-value: 4e-05 AA3_4.hmm 467 alhitGttragkdket.svvdenskvwgfknLyvGGngvIptafa 510 a h Gt +g+d+et +v+d++ v+g++ Ly++ + I t + 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 496 ADHPMGTCMIGEDHETfAVADRDAAVFGTSGLYIADASLIRTVDG 540 66889*******765538************************999 PP AA3_4.hmm 511 aNPtlT 516 a P 926925|Dacma1_GeneCatalog_proteins_20180621.aa.fasta|AA3_2|AA3_2 541 ATPNAS 546 988665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (572 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.00u 0.01s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 92.89 // Query: 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 [L=571] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.8e-101 327.0 0.0 9.8e-101 326.5 0.0 1.1 1 AA3_2.hmm 1.3e-61 197.1 0.0 1.7e-61 196.7 0.0 1.0 1 AA3.hmm 5e-44 139.1 0.0 3.4e-34 106.6 0.0 2.1 2 AA3_1.hmm 3e-37 116.5 0.0 1.2e-29 91.4 0.0 3.1 3 AA3_3.hmm 7.1e-13 36.7 0.1 6.6e-07 17.0 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 326.5 0.0 9.8e-101 9.8e-101 4 563 .. 29 559 .. 29 562 .. 0.85 Alignments for each domain: == domain 1 score: 326.5 bits; conditional E-value: 9.8e-101 AA3_2.hmm 4 DYviVGGGtAGlvvAsrLsedpnvsVlviEaGgdeen.dplidvp 47 D viVGGGtAGl+vA +++ n++V v+EaG+d+++ +p+i+vp 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 29 DVVIVGGGTAGLTVAYEIASRTNLRVRVLEAGDDPTAqNPDIEVP 73 89**********************************966****** PP AA3_2.hmm 48 g.lagsllgseldwnyttepqkglnnrsiklprGkvlGGssaiNa 91 ++ + + ++w++ ++pq++ +n +i+lpr k+lGG+s +N+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 74 IkEFEVYSNPMWEWGFVSTPQTHSSNVTIPLPRFKGLGGCSQHNG 118 615555566699********************************* PP AA3_2.hmm 92 mlytrgskadydaWaellgnegWswdnllpyfkksetftppdeeq 136 + gs++ yd+W + g++++++ +++ + e + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 119 EGFWLGSQYTYDKWPK-----GFKYRDFHQAVLQEEGCVS----- 153 **************95.....7999999998888888887..... PP AA3_2.hmm 137 deanitydasvhgtsGplkvsfp..eeasplskallealeelGvp 179 + hgt+Gpl++ + +p a+ +a+ ++G++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 154 ------FGLPNHGTTGPLHTLLDplDAIDPYLVAFKAAALQAGYR 192 ......45789********87763355999*************** PP AA3_2.hmm 180 tnkdlnsgdalGvslvpstidpttgtRssaatayldpv.ekrsnl 223 +n+d n+ a+G++ t+++ g+R + ++v + +nl 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 193 FNPDENAPLAKGYMPHVVTYKD--GRRFGPYGVF-KSVrGRLPNL 234 ************7777777777..9999999766.6661566*** PP AA3_2.hmm 224 tvltnatvtkilfdstk.......kkatGVevtk..kdg..kkyt 257 +v +n+tvt +lf + + k+tGV+ + +dg +++t 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 235 RVDLNTTVTGLLFGGGTnqdekkrLKITGVTADRvgRDGfqSNIT 279 *************999999999999*******9998554336899 PP AA3_2.hmm 258 vkarkEVILsaGainsPqlLmlSGiGpkeeLeklgIpvvvdlpgV 302 + ark V+++aGa+++Pq+Lm+SGiGpk+ L+++gI++ vdlpgV 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 280 YLARKAVVMAAGAYQTPQILMVSGIGPKDMLRNAGINLRVDLPGV 324 9******************************************** PP AA3_2.hmm 303 GenLqDhllvpvsfevke.pletldellsdptvaaealaeylank 346 G+ L+Dh +vp ++ + p ++dp++ ae+++ y+a++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 325 GKALKDHYAVPYIINSLQiP------PMNDPAFFAEQAQLYAATQ 363 **********9666555414......3579*************** PP AA3_2.hmm 347 tGpltssvsevlafvklpeilskeeksnlaslaaqeella.dedv 390 tG ++ + s+ +a+ ++ +++ + + d + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 364 TGYFAWPPSDHAAVTASTNGNQQNPF------------VPvDVVM 396 ***99887777777662222122222............1112233 PP AA3_2.hmm 391 pdlelvlvplalntaespaegknylsilvvllkplSrGsvklasa 435 +++ + ++p ++n + lvvl++p+S G+v+++s 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 397 ATFPYTFFP---------GFNANQILSLVVLTNPRSSGTVTVSSG 432 334444443.........346789999****************** PP AA3_2.hmm 436 dpldkplidpnylsdplDlevlvegvklarkiastkalkelvaee 480 +++d+p+id ny+sdp+D+evl +gv l+r+i++++al+++ +e 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 433 SIYDPPVIDLNYFSDPRDFEVLYKGVDLLRQIFKQPALSQWFGSE 477 *******************************************99 PP AA3_2.hmm 481 vapgaevqsdeeleeyireslstvyHpvGTcamgpre.kggVVDs 524 p+ + ++ +++++ t+ Hp+GTc +g+++ +V D+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 478 LFPDGA------DNTTLKAQVFTADHPMGTCMIGEDHeTFAVADH 516 999843......2568999***************9998999**** PP AA3_2.hmm 525 elrVyGvknLRVvDaSvfPll....vsahtqatvyavAekaAd 563 ++ V+G+++L ++DaS + ++ ++a + tv+ vA+ +A+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 517 DAAVFGTSGLYIADASLIRTVdgatPNASIHGTVILVAKIVAN 559 ******************9872222555555677777776665 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 196.7 0.0 1.7e-61 1.7e-61 86 388 .. 24 548 .. 13 564 .. 0.80 Alignments for each domain: == domain 1 score: 196.7 bits; conditional E-value: 1.7e-61 AA3.hmm 86 skeeyDvvivGsGaaGsvlAsrLsea...gvlllEaGeedlnee. 126 + e DvvivG+G+aG+++A++++ +v +lEaG + + + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 24 RSEIDDVVIVGGGTAGLTVAYEIASRtnlRVRVLEAGDDPTAQNp 68 555559******************99***********88765446 PP AA3.hmm 127 ......kklied.......evklds.....tepq..lngrriilp 151 k + + ++pq ++ +i lp 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 69 dievpiK----EfevysnpM----WewgfvSTPQthSSNVTIPLP 105 5554432....131222222....144558889965555555556 PP AA3.hmm 152 rgkvlGGsslinamvylrgqaedfdawaeegegwswddllpyfkk 196 r k+lGG+s +n+ +++ g++ +d+w + g +++d+ + + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 106 RFKGLGGCSQHNGEGFWLGSQYTYDKWPK---GFKYRDFHQAVLQ 147 ************************99964...5667777777777 PP AA3.hmm 197 aeell.......................................r 202 e + r 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 148 EEGCVsfglpnhgttgplhtlldpldaidpylvafkaaalqagyR 192 665559988888888877777777766666666666555555550 PP AA3.hmm 203 ......................rrssaakayldplp.a.pnleil 223 r + ++++ + pnl++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 193 fnpdenaplakgymphvvtykdGRRFGPYGVFKSVRgRlPNLRVD 237 555666666677777777778844444555666656469****** PP AA3.hmm 224 tnarvtkilf..............ag...............tlva 239 n++vt +lf +g t+ a 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 238 LNTTVTGLLFgggtnqdekkrlkiTGvtadrvgrdgfqsniTYLA 282 **********987777666555551166666667777777667** PP AA3.hmm 240 akeVilaaGaigspqlLllSgigpaee.eslgipvvvdlp.vgen 282 +k V+ aaGa+++pq+L+ Sgigp++ +++gi++ vdlp vg+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 283 RKAVVMAAGAYQTPQILMVSGIGPKDMlRNAGINLRVDLPgVGKA 327 ********************************************* PP AA3.hmm 283 lq........................................... 284 l+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 328 LKdhyavpyiinslqippmndpaffaeqaqlyaatqtgyfawpps 372 ********************************************* PP AA3.hmm 285 ............................................. 284 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 373 dhaavtastngnqqnpfvpvdvvmatfpytffpgfnanqilslvv 417 ********************************************* PP AA3.hmm 285 ..apks..svrlnssdpldpplidpnylsderdvellvegvr... 322 +p+s +v+++s +dpp+id ny+sd+rd e+l +gv 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 418 ltNPRSsgTVTVSSGSIYDPPVIDLNYFSDPRDFEVLYKGVDllr 462 **999989999999999*****************99999999888 PP AA3.hmm 323 .................eeetdd......treeiqtiyHpvGtcr 344 + d + ++ t+ Hp+Gtc+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 463 qifkqpalsqwfgselfP----DgadnttLKAQVFTADHPMGTCM 503 888777766666554441....0455674555599999******* PP AA3.hmm 345 mgeddas.aVVdpnlrvhgvenLrvvDasvfPtilggnpnltiva 388 +ged ++ aV d++ v+g+++L+++Das + t g+ pn++i 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 504 IGEDHETfAVADHDAAVFGTSGLYIADASLIRTVDGATPNASIHG 548 ****7776999********************88777777777644 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.2 0.1 4.8e-11 4.8e-11 10 137 .. 21 145 .. 15 152 .. 0.80 2 ! 106.6 0.0 3.4e-34 3.4e-34 190 541 .. 205 558 .. 182 564 .. 0.79 Alignments for each domain: == domain 1 score: 30.2 bits; conditional E-value: 4.8e-11 AA3_1.hmm 10 tpvaketyDyivvGaGagGivvAdrLs.eagkkvLLlekGgpsty 53 +++++e D+++vG+G++G++vA ++ ++ +v +le G +t+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 21 AQTRSEIDDVVIVGGGTAGLTVAYEIAsRTNLRVRVLEAGDDPTA 65 56777788***************8876489*************** PP AA3_1.hmm 54 atggtekpewlentnltrfDvpg..lcneiladssgvactdtaqm 96 + ++ e+p + ++ ++ +++ +++s+ ++ + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 66 QNPDIEVPIK--EFEVYSNPMWEwgFVSTP-QTHSSNVTIPLPRF 107 ****777644..556655555553133333.33555677777788 PP AA3_1.hmm 97 agcvlGGgtavNaglfvkpqasdfddkfpkgwksedvqdaa 137 g lGG + N f+ ++ +d k+pkg+k+ d+++a+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 108 KG--LGGCSQHNGEGFWLGSQYTYD-KWPKGFKYRDFHQAV 145 77..9*******************6.9**********9997 PP == domain 2 score: 106.6 bits; conditional E-value: 3.4e-34 AA3_1.hmm 190 yghppfmisngerggPlatYLpsAkkrsNfklilntkVkrvv... 231 y + +++g+r gP + + +N + lnt+V+ + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 205 YMPHVVTYKDGRRFGPYGVFKSVRGRLPNLRVDLNTTVTGLLfgg 249 6677889**********************************9999 PP AA3_1.hmm 232 ......rsggkvtGVeve..ssgGqrevikvtkggrVilsAGals 268 ++ k+tGV+++ + +G +++i+ + ++V+++AGa + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 250 gtnqdeKKRLKITGVTADrvGRDGFQSNITYLARKAVVMAAGAYQ 294 99987777789*******99999999999999************* PP AA3_1.hmm 269 spkiLlrSGigpkdqlevvkasasdgvtliaksdwinlp.vGknl 312 +p+iL+ SGigpkd l+++ + ++lp vGk l 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 295 TPQILMVSGIGPKDMLRNAGI----NL-------RVDLPgVGKAL 328 ****************87762....22.......366655***** PP AA3_1.hmm 313 kdhpntdlkiktkeisaydfyealtspitedkdlylnqrsGilaq 357 kdh + i++ +i ++ + +e+++ly+ ++G +a 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 329 KDHYAVPYIINSLQIPPMNDP----AFFAEQAQLYAATQTGYFAW 369 **********99998888775....6788999************9 PP AA3_1.hmm 358 aaqniifweevkgadgr.....vrqlqwtasvegsaaaaknnalt 397 + + + ++ +++ v + t ++ ++n+ + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 370 PPSDHAAVTASTNGNQQnpfvpVDVVMATFPYTFFPGFNANQ-IL 413 887775555544444440111134444555555555455555.55 PP AA3_1.hmm 398 vsvyltrgltSrGrleitakg..ntvvskkpylsdaeDkeavaqf 440 v lt+ ++S G++++++ + v + y+sd++D e++ ++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 414 SLVVLTNPRSS-GTVTVSSGSiyDPPVIDLNYFSDPRDFEVLYKG 457 55789999955.******96656888999**************** PP AA3_1.hmm 441 ienliaalsaasgltlvspasnttvedlvksllvsvakrsanHwm 485 ++ l++ +++ + ++ + d ++ + + + + a+H m 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 458 VDLLRQIFKQPALSQWF---GSELFPDGADNTTLKAQVFTADHPM 499 **999999996544554...2222333334444466779****** PP AA3_1.hmm 486 gtaklGtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNps 530 gt+ +G+ d++ +v D ++ V+Gt L+++DAS++ ++ ++ p+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 500 GTCMIGE-DHETFAVADHDAAVFGTSGLYIADASLIRTVDGATPN 543 ******6.59**************************988766666 PP AA3_1.hmm 531 a....iimvaaekaa 541 a +++ +a+ a 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 544 AsihgTVILVAKIVA 558 511223445555555 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 91.4 0.0 1.2e-29 1.2e-29 4 315 .. 29 339 .. 26 374 .. 0.85 2 ! 4.7 0.0 0.0022 0.0022 404 462 .. 409 466 .. 384 477 .. 0.83 3 ! 16.7 0.0 5.2e-07 5.2e-07 516 564 .. 487 536 .. 481 560 .. 0.83 Alignments for each domain: == domain 1 score: 91.4 bits; conditional E-value: 1.2e-29 AA3_3.hmm 4 DviiaGgGtagcvvagRlaeadpnLkvllvegGkn.nlddplvvk 47 Dv+i+GgGtag va +a+ nL+v ++e+G++ + ++p + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 29 DVVIVGGGTAGLTVAYEIAS-RTNLRVRVLEAGDDpTAQNPDIEV 72 9*****************97.579*********993568999*** PP AA3_3.hmm 48 PalflsnlkpesktalfykaekseeldgRelivpaggvlGGGssi 92 P+ + ++ f+++ ++ + ++ ++ p + lGG s 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 73 PIKEFEVYSNPMWEWGFVST-PQTHSSNVTIPLPRFKGLGGCSQH 116 *9988877666666666655.45555677888888999******* PP AA3_3.hmm 93 nflmYtraqasDfdswkteGWsakdllpllkkletyqgkgdeevh 137 n + +++ +d+w +G++ d+ + + + e g h 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 117 NGEGFWLGSQYTYDKWP-KGFKYRDFHQAVLQEEGCVSFG-LPNH 159 ****************6.7**********99999987766.567* PP AA3_3.hmm 138 GkeGPikvskGtyts.krveddfleaaeelgipevdDlqdletsn 181 G++GP++ + + f +aa ++g++ D + + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 160 GTTGPLHTLLDPLDAiDPYLVAFKAAALQAGYRFNPDENAPLAKG 204 ******98877665415577889999999****999987766666 PP AA3_3.hmm 182 gveralryvsrdGrRqDaAhaylhpklksgkkpnLhvlveskvsr 226 + +++ y +dGrR +++ ++ g+ pnL v ++++v+ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 205 YMPHVVTY--KDGRRFGPYG--VFKSVR-GRLPNLRVDLNTTVTG 244 66777777..78***86544..455555.489************* PP AA3_3.hmm 227 vlf......enkravgvelvpnkafqkeaksksrtvkarklvvvs 265 +lf ++k+ + v+ ++ ++ +++ t+ ark+vv++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 245 LLFgggtnqDEKKRLKITGVTADRVGRDGFQSNITYLARKAVVMA 289 ****999998999999999999999999999999*********** PP AA3_3.hmm 266 aGalgtPlvLeRsGiGakevLekagvkvvvdlpgvGenyqDHkll 310 aGa tP++L sGiG k++L++ag+++ vdlpgvG+ ++DH+ + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 290 AGAYQTPQILMVSGIGPKDMLRNAGINLRVDLPGVGKALKDHYAV 334 *******************************************98 PP AA3_3.hmm 311 lvpyr 315 ++ + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 335 PYIIN 339 77655 PP == domain 2 score: 4.7 bits; conditional E-value: 0.0022 AA3_3.hmm 404 ekkyltlsaftayPysrGsihitspdpeeeidFetgflkdkaDlk 448 +++ l+l + ++ P s G++ + s ++++++ + +++d++D++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 409 ANQILSLVV-LTNPRSSGTVTVSSGSIYDPPVIDLNYFSDPRDFE 452 555555554.557*******************************9 PP AA3_3.hmm 449 klvwaYkkqReiaR 462 l + R+i++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 453 VLYKGVDLLRQIFK 466 99888888888765 PP == domain 3 score: 16.7 bits; conditional E-value: 5.2e-07 AA3_3.hmm 516 wvrenvettWhslgtckmap.rekggvvdkkLnvyGvegLkvaDl 559 ++++v t+ h +gtc ++ +e+ +v d++ v+G+ gL +aD 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 487 TLKAQVFTADHPMGTCMIGEdHETFAVADHDAAVFGTSGLYIADA 531 67899*************8625668999***************** PP AA3_3.hmm 560 sivPe 564 s++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 532 SLIRT 536 *9754 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 5.4 0.0 0.0021 0.0021 5 39 .. 29 64 .. 25 85 .. 0.90 2 ! 17.0 0.0 6.6e-07 6.6e-07 232 293 .. 238 318 .. 221 335 .. 0.65 3 ! 10.6 0.1 5.7e-05 5.7e-05 467 516 .. 495 545 .. 479 561 .. 0.81 Alignments for each domain: == domain 1 score: 5.4 bits; conditional E-value: 0.0021 AA3_4.hmm 5 dvliaGSGpiGatyArtlvd.aglkvlmveiGaqds 39 dv+i+G G G t A +++ ++l+v ++e G+ + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 29 DVVIVGGGTAGLTVAYEIASrTNLRVRVLEAGDDPT 64 9******************9789********99755 PP == domain 2 score: 17.0 bits; conditional E-value: 6.6e-07 AA3_4.hmm 232 tetrctkl....eldeskek..kieaaevkdLlk....nkdllvk 266 +t +t l ++++++k ki+ ++ ++ + ++ ++ 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 238 LNTTVTGLlfggGTNQDEKKrlKITGVTADRVGRdgfqSNITYLA 282 566666664333122222224577777777776655533355788 PP AA3_4.hmm 267 akvyviaaGavltpqiLanSgfgke.........ke 293 k++v+aaGa +tpqiL+ Sg+g + + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 283 RKAVVMAAGAYQTPQILMVSGIGPKdmlrnaginLR 318 89999*****************98655555555444 PP == domain 3 score: 10.6 bits; conditional E-value: 5.7e-05 AA3_4.hmm 467 alhitGttragkdket.svvdenskvwgfknLyvGGngvIptafa 510 a h Gt +g+d+et +v+d++ v+g++ Ly++ + I t + 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 495 ADHPMGTCMIGEDHETfAVADHDAAVFGTSGLYIADASLIRTVDG 539 66889*******765538************************999 PP AA3_4.hmm 511 aNPtlT 516 a P 580769|Ilyeu1_GeneCatalog_proteins_20170627.aa.fasta|AA3_2|AA3_2 540 ATPNAS 545 988665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (571 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 95.29 // Query: 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 [L=553] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.4e-94 304.9 0.1 1.5e-82 266.4 0.0 2.1 2 AA3_2.hmm 2.5e-62 199.4 0.0 3.3e-62 199.0 0.0 1.0 1 AA3.hmm 1e-41 131.5 0.6 9.4e-30 92.0 0.1 3.1 2 AA3_1.hmm 5.6e-37 115.6 0.0 2.5e-29 90.4 0.0 3.1 3 AA3_3.hmm 1.7e-13 38.7 0.2 6.1e-07 17.1 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 266.4 0.0 1.5e-82 1.5e-82 4 469 .. 30 467 .. 30 473 .. 0.85 2 ! 36.4 0.7 6.9e-13 6.9e-13 496 563 .. 469 541 .. 465 544 .. 0.80 Alignments for each domain: == domain 1 score: 266.4 bits; conditional E-value: 1.5e-82 AA3_2.hmm 4 DYviVGGGtAGlvvAsrLsedpnvsVlviEaGgdeen.dplidvp 47 D viVGGGtAGl+vA +++ n++V v+EaGgd+++ +p+i+vp 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 30 DVVIVGGGTAGLTVAYEIASRTNLRVRVLEAGGDPTTqNPEIEVP 74 89**********************************966****** PP AA3_2.hmm 48 g.lagsllgseldwnyttepqkglnnrsiklprGkvlGGssaiNa 91 ++ + + ++w++ ++pq++ +n +i+l+r k+lGG+s +N+ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 75 IkEFEVYSNPMWEWGFVSTPQNHSSNVTIPLARFKGLGGCSQHNG 119 615555566699********************************* PP AA3_2.hmm 92 mlytrgskadydaWaellgnegWswdnllpyfkksetftppdeeq 136 + gs++ yd+W + g++++++ +++ + e + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 120 EGFWLGSQYTYDKWPK-----GFKYRDFHQAVLQEEGCVS----- 154 **************95.....7999999998888888887..... PP AA3_2.hmm 137 deanitydasvhgtsGplkvsfp..eeasplskallealeelGvp 179 + hgt+Gpl++ + +p a+ +a+ ++G++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 155 ------FGLPNHGTTGPLHTLLDplDAIDPYLVAFKAAALQAGYR 193 ......45789********87763355999*************** PP AA3_2.hmm 180 tnkdlnsgdalGvslvpstidpttgtRssaatayldpv.ekrsnl 223 +n+d n+ a+G++ t+++ g+R + +++ + +nl 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 194 FNPDENAPLAKGYMPHVVTYKD--GRRFGPYGVF-KSIrGRLPNL 235 ************7777777777..9999999766.5561567*** PP AA3_2.hmm 224 tvltnatvtkilfdstk.......kkatGVevtk..kdg..kkyt 257 ++ +n+tvt +lf + + k+tGV+ + ++g +++t 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 236 RIDLNTTVTGLLFGGGTdqdkkkrLKITGVTADRvgRNGfeSNIT 280 *************999889999999*******9998555336899 PP AA3_2.hmm 258 vkarkEVILsaGainsPqlLmlSGiGpkeeLeklgIpvvvdlpgV 302 + ark V+++aGa+++Pq+Lm+SGiGpk+ L+++gI++ vdlpgV 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 281 YLARKAVVMAAGAYQTPQILMVSGIGPKDMLRNAGINLRVDLPGV 325 9******************************************** PP AA3_2.hmm 303 GenLqDhllvpvsfevke.pletldellsdptvaaealaeylank 346 G+ L+Dh +vp ++ + p ++dp++ ae+++ y+a++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 326 GKALKDHYAVPYIINSLQiP------PMNDPAFFAEQAQLYAATQ 364 **********9666555414......3579*************** PP AA3_2.hmm 347 tGpltssvsevlafvklpeilskeeksnlaslaaqeelladedvp 391 tG ++ + ++ +a+ ++ +++ + + dv 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 365 TGYFAWPPADHAAVTASTNGNQQNPF------------VP-VDVV 396 **999887777777762222111111............11.1222 PP AA3_2.hmm 392 dlelvlvplalntaespaegknylsilvvllkplSrGsvklasad 436 + + p+ + p ++n + lvvl++p S G+v+++s + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 397 MVTF---PY----TFFPGFNANQILSLVVLTNPSSSGTVTVSSGS 434 2222...22....2224456789999******************* PP AA3_2.hmm 437 pldkplidpnylsdplDlevlvegvklarkias 469 ++d+p+id ny+sdp D+evl +gv l+r+ + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 435 IYDPPVIDLNYFSDPQDFEVLYKGVDLLRRADN 467 ****************************99765 PP == domain 2 score: 36.4 bits; conditional E-value: 6.9e-13 AA3_2.hmm 496 yireslstvyHpvGTcamgpre.kggVVDselrVyGvknLRVvDa 539 +++++ t+ Hp+GTc +g+++ +V D+++ V+G+++L ++Da 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 469 TLKAQVFTADHPMGTCMIGEDHeTFAVADHDAAVFGTSGLYIADA 513 5788999************9998999******************* PP AA3_2.hmm 540 SvfPllvsahtq....atvyavAekaAd 563 S + ++ +a ++ atv+ vA+ +A+ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 514 SLIRTVNGATPNasihATVILVAKIVAN 541 **99876655550000666666666665 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 199.0 0.0 3.3e-62 3.3e-62 87 400 .. 26 542 .. 14 547 .. 0.81 Alignments for each domain: == domain 1 score: 199.0 bits; conditional E-value: 3.3e-62 AA3.hmm 87 keeyDvvivGsGaaGsvlAsrLsea...gvlllEaGeedlnee.. 126 + DvvivG+G+aG+++A++++ +v +lEaG++ +++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 26 SKIDDVVIVGGGTAGLTVAYEIASRtnlRVRVLEAGGDPTTQNpe 70 44459******************99************98776676 PP AA3.hmm 127 .....kkl..ied.evklds...tepq.lngrriilp.rgkvlGG 158 k++ +++ +++ + ++pq + + i + r k+lGG 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 71 ievpiKEFevYSNpMWE--WgfvSTPQnHSSNVTIPLaRFKGLGG 113 65544222222223243..1558888864444444445******* PP AA3.hmm 159 sslinamvylrgqaedfdawaeegegwswddllpyfkkaeell.. 201 +s +n+ +++ g++ +d+w + g +++d+ + + e + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 114 CSQHNGEGFWLGSQYTYDKWPK---GFKYRDFHQAVLQEEGCVsf 155 *****************99964...56677777777776655599 PP AA3.hmm 202 .....................................r....... 202 r 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 156 glpnhgttgplhtlldpldaidpylvafkaaalqagyRfnpdena 200 888888888777777777666666666665555555505556666 PP AA3.hmm 203 ...............rrssaakayldplp.a.pnleiltnarvtk 230 r + ++++ + pnl+i n++vt 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 201 plakgymphvvtykdGRRFGPYGVFKSIRgRlPNLRIDLNTTVTG 245 66677777777777844445556666655469************* PP AA3.hmm 231 ilf..............ag...............tlvaakeVila 246 +lf +g t+ a+k V+ a 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 246 LLFgggtdqdkkkrlkiTGvtadrvgrngfesniTYLARKAVVMA 290 ***987777666655551166666667777777667********* PP AA3.hmm 247 aGaigspqlLllSgigpaee.eslgipvvvdlp.vgenlq..... 284 aGa+++pq+L+ Sgigp++ +++gi++ vdlp vg+ l+ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 291 AGAYQTPQILMVSGIGPKDMlRNAGINLRVDLPgVGKALKdhyav 335 ********************************************* PP AA3.hmm 285 ............................................. 284 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 336 pyiinslqippmndpaffaeqaqlyaatqtgyfawppadhaavta 380 ********************************************* PP AA3.hmm 285 ........................................apks. 288 +p s 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 381 stngnqqnpfvpvdvvmvtfpytffpgfnanqilslvvltNPSSs 425 ***************************************988888 PP AA3.hmm 289 .svrlnssdpldpplidpnylsderdvellvegvree.etdd..t 329 +v+++s +dpp+id ny+sd++d e+l +gv + d+ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 426 gTVTVSSGSIYDPPVIDLNYFSDPQDFEVLYKGVDLLrRADNttL 470 9999999999************************96655444545 PP AA3.hmm 330 reeiqtiyHpvGtcrmgeddas.aVVdpnlrvhgvenLrvvDasv 373 + ++ t+ Hp+Gtc++ged ++ aV d++ v+g+++L+++Das 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 471 KAQVFTADHPMGTCMIGEDHETfAVADHDAAVFGTSGLYIADASL 515 55599999***********7776999******************* PP AA3.hmm 374 fPtilggnpnltivaiaeraadlikkd 400 + t g+ pn++i a +a++++++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 516 IRTVNGATPNASIHATVILVAKIVANK 542 *99999999998888777777766655 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.1 0.1 1.3e-11 1.3e-11 8 137 .. 20 146 .. 15 152 .. 0.80 2 ! 92.0 0.1 9.4e-30 9.4e-30 190 537 .. 206 532 .. 193 546 .. 0.79 Alignments for each domain: == domain 1 score: 32.1 bits; conditional E-value: 1.3e-11 AA3_1.hmm 8 aatpvaketyDyivvGaGagGivvAdrLs.eagkkvLLlekGgps 51 +a++++++ D+++vG+G++G++vA ++ ++ +v +le Gg + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 20 VAAQTRSKIDDVVIVGGGTAGLTVAYEIAsRTNLRVRVLEAGGDP 64 4577888889***************8876489************* PP AA3_1.hmm 52 tyatggtekpewlentnltrfDvpg.lcneiladssgvactdtaq 95 t + ++ e+p + ++ ++ + + +++s+ ++ a 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 65 TTQNPEIEVPIK--EFEVYSNPMWEwGFVSTPQNHSSNVTIPLAR 107 *99999776644..5566666665532333333455677777777 PP AA3_1.hmm 96 magcvlGGgtavNaglfvkpqasdfddkfpkgwksedvqdaa 137 + g lGG + N f+ ++ +d k+pkg+k+ d+++a+ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 108 FKG--LGGCSQHNGEGFWLGSQYTYD-KWPKGFKYRDFHQAV 146 777..9*******************6.9**********9997 PP == domain 2 score: 92.0 bits; conditional E-value: 9.4e-30 AA3_1.hmm 190 yghppfmisngerggPlatYLpsAkkrsNfklilntkVkrvv... 231 y + +++g+r gP + + +N ++ lnt+V+ + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 206 YMPHVVTYKDGRRFGPYGVFKSIRGRLPNLRIDLNTTVTGLLfgg 250 6677889**********************************9999 PP AA3_1.hmm 232 ......rsggkvtGVeve..ssgGqrevikvtkggrVilsAGals 268 ++ k+tGV+++ + +G +++i+ + ++V+++AGa + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 251 gtdqdkKKRLKITGVTADrvGRNGFESNITYLARKAVVMAAGAYQ 295 99988777779*******99999999999999************* PP AA3_1.hmm 269 spkiLlrSGigpkdqlevvkasasdgvtliaksdwinlp.vGknl 312 +p+iL+ SGigpkd l+++ + ++lp vGk l 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 296 TPQILMVSGIGPKDMLRNAGI----NL-------RVDLPgVGKAL 329 ****************87762....22.......366655***** PP AA3_1.hmm 313 kdhpntdlkiktkeisaydfyealtspitedkdlylnqrsGilaq 357 kdh + i++ +i ++ + +e+++ly+ ++G +a 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 330 KDHYAVPYIINSLQIPPMNDP----AFFAEQAQLYAATQTGYFAW 370 **********99998888775....6788999***********98 PP AA3_1.hmm 358 aaqniifweevkgadgr.....vrqlqwtasvegsaaaaknnalt 397 + + + ++ +++ v + t ++ ++n++l+ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 371 PPADHAAVTASTNGNQQnpfvpVDVVMVTFPYTFFPGFNANQILS 415 876664444444433330122244555666656655555555555 PP AA3_1.hmm 398 vsvyltrgltSrGrleitakg..ntvvskkpylsdaeDkeavaqf 440 v lt+ ++S G++++++ + v + y+sd++D e++ ++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 416 -LVVLTNPSSS-GTVTVSSGSiyDPPVIDLNYFSDPQDFEVLYKG 458 .5789999966.******96656888999**************** PP AA3_1.hmm 441 ienliaalsaasgltlvspasnttvedlvksllvsvakrsanHwm 485 ++ l++a +++ l++++ + a+H m 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 459 VDLLRRADNTT----------------LKAQV------FTADHPM 481 *9887664433................23334......689**** PP AA3_1.hmm 486 gtaklGtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNps 530 gt+ +G+ d++ +v D ++ V+Gt L+++DAS++ ++ ++ p+ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 482 GTCMIGE-DHETFAVADHDAAVFGTSGLYIADASLIRTVNGATPN 525 ******6.59**************************999877776 PP AA3_1.hmm 531 aiimvaa 537 a i + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 526 ASIHATV 532 6554332 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 90.4 0.0 2.5e-29 2.5e-29 4 315 .. 30 340 .. 27 376 .. 0.84 2 ! 3.7 0.0 0.0045 0.0045 404 450 .. 410 455 .. 386 467 .. 0.79 3 ! 18.1 0.0 2e-07 2e-07 516 571 .. 469 525 .. 463 543 .. 0.77 Alignments for each domain: == domain 1 score: 90.4 bits; conditional E-value: 2.5e-29 AA3_3.hmm 4 DviiaGgGtagcvvagRlaeadpnLkvllvegGkn.nlddplvvk 47 Dv+i+GgGtag va +a+ nL+v ++e+G + ++++p++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 30 DVVIVGGGTAGLTVAYEIAS-RTNLRVRVLEAGGDpTTQNPEIEV 73 9*****************97.579*******987636799***** PP AA3_3.hmm 48 PalflsnlkpesktalfykaekseeldgRelivpaggvlGGGssi 92 P+ + ++ f+++ ++++ + ++ + + lGG s 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 74 PIKEFEVYSNPMWEWGFVSTPQNHSS-NVTIPLARFKGLGGCSQH 117 *9988877777777777666555443.444444444569****** PP AA3_3.hmm 93 nflmYtraqasDfdswkteGWsakdllpllkkletyqgkgdeevh 137 n + +++ +d+w +G++ d+ + + + e g h 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 118 NGEGFWLGSQYTYDKWP-KGFKYRDFHQAVLQEEGCVSFG-LPNH 160 ****************6.7**********99999987766.567* PP AA3_3.hmm 138 GkeGPikvskGtyts.krveddfleaaeelgipevdDlqdletsn 181 G++GP++ + + f +aa ++g++ D + + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 161 GTTGPLHTLLDPLDAiDPYLVAFKAAALQAGYRFNPDENAPLAKG 205 ******98877665415577889999999****999987766666 PP AA3_3.hmm 182 gveralryvsrdGrRqDaAhaylhpklksgkkpnLhvlveskvsr 226 + +++ y +dGrR +++ ++ + pnL + ++++v+ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 206 YMPHVVTY--KDGRRFGPYG--VFKSIRG-RLPNLRIDLNTTVTG 245 66777777..78***86543..6666665.99************* PP AA3_3.hmm 227 vlf......enkravgvelvpnkafqkeaksksrtvkarklvvvs 265 +lf ++k+ + v+ ++ ++ +++ t+ ark+vv++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 246 LLFgggtdqDKKKRLKITGVTADRVGRNGFESNITYLARKAVVMA 290 ****999777778888999999999999999999*********** PP AA3_3.hmm 266 aGalgtPlvLeRsGiGakevLekagvkvvvdlpgvGenyqDHkll 310 aGa tP++L sGiG k++L++ag+++ vdlpgvG+ ++DH+ + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 291 AGAYQTPQILMVSGIGPKDMLRNAGINLRVDLPGVGKALKDHYAV 335 *******************************************98 PP AA3_3.hmm 311 lvpyr 315 ++ + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 336 PYIIN 340 77655 PP == domain 2 score: 3.7 bits; conditional E-value: 0.0045 AA3_3.hmm 404 ekkyltlsaftayPysrGsihitspdpeeeidFetgflkdkaDlk 448 +++ l+l + ++ P s G++ + s ++++++ + +++d++D++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 410 ANQILSLVV-LTNPSSSGTVTVSSGSIYDPPVIDLNYFSDPQDFE 453 555566554.557******************************98 PP AA3_3.hmm 449 kl 450 l 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 454 VL 455 65 PP == domain 3 score: 18.1 bits; conditional E-value: 2e-07 AA3_3.hmm 516 wvrenvettWhslgtckmap.rekggvvdkkLnvyGvegLkvaDl 559 ++++v t+ h +gtc ++ +e+ +v d++ v+G+ gL +aD 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 469 TLKAQVFTADHPMGTCMIGEdHETFAVADHDAAVFGTSGLYIADA 513 67899*************8625668999***************** PP AA3_3.hmm 560 sivPenvgantn 571 s++ ga n 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 514 SLIRTVNGATPN 525 *98765555333 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 4.4 0.0 0.0045 0.0045 5 37 .. 30 63 .. 26 104 .. 0.90 2 ! 17.1 0.0 6.1e-07 6.1e-07 231 293 .. 238 319 .. 222 336 .. 0.65 3 ! 13.5 0.3 7.8e-06 7.8e-06 467 529 .. 477 540 .. 468 543 .. 0.83 Alignments for each domain: == domain 1 score: 4.4 bits; conditional E-value: 0.0045 AA3_4.hmm 5 dvliaGSGpiGatyArtlvd.aglkvlmveiGaq 37 dv+i+G G G t A +++ ++l+v ++e G 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 30 DVVIVGGGTAGLTVAYEIASrTNLRVRVLEAGGD 63 9******************97899**99999975 PP == domain 2 score: 17.1 bits; conditional E-value: 6.1e-07 AA3_4.hmm 231 ltetrctkl....eldeskek..kieaaevkdLlk....nkdllv 265 +t +t l +d++k+k ki+ ++ ++ + ++ ++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 238 DLNTTVTGLlfggGTDQDKKKrlKITGVTADRVGRngfeSNITYL 282 556666666433322333333467777777777764543335578 PP AA3_4.hmm 266 kakvyviaaGavltpqiLanSgfgke.........ke 293 k++v+aaGa +tpqiL+ Sg+g + + 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 283 ARKAVVMAAGAYQTPQILMVSGIGPKdmlrnaginLR 319 889999*****************98655555555444 PP == domain 3 score: 13.5 bits; conditional E-value: 7.8e-06 AA3_4.hmm 467 alhitGttragkdket.svvdenskvwgfknLyvGGngvIptafa 510 a h Gt +g+d+et +v+d++ v+g++ Ly++ + I t ++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 477 ADHPMGTCMIGEDHETfAVADHDAAVFGTSGLYIADASLIRTVNG 521 56889*******765538*************************** PP AA3_4.hmm 511 aNPtlTsvafAikgaekiv 529 a P a i a+ ++ 664406|Daces1_GeneCatalog_proteins_20180402.aa.fasta|AA3_2|AA3_2 522 ATPNASIHATVILVAKIVA 540 **98877777776666555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (553 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.03u 0.01s 00:00:00.04 Elapsed: 00:00:00.03 # Mc/sec: 51.28 // Query: 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 [L=566] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.6e-101 326.6 0.0 1.2e-100 326.1 0.0 1.1 1 AA3_2.hmm 7.3e-62 197.9 0.0 9.4e-62 197.5 0.0 1.0 1 AA3.hmm 8.3e-45 141.7 0.0 8.1e-35 108.7 0.0 2.1 2 AA3_1.hmm 9.2e-38 118.2 0.0 1.4e-29 91.2 0.0 3.1 3 AA3_3.hmm 4e-13 37.6 0.0 7.3e-07 16.9 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 326.1 0.0 1.2e-100 1.2e-100 4 563 .. 24 554 .. 24 557 .. 0.85 Alignments for each domain: == domain 1 score: 326.1 bits; conditional E-value: 1.2e-100 AA3_2.hmm 4 DYviVGGGtAGlvvAsrLsedpnvsVlviEaGgdeen.dplidvp 47 D viVGGGtAGl+vA +++ n++V v+EaG+d+++ +p+i+vp 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 24 DVVIVGGGTAGLTVAYEIASRTNLRVRVLEAGDDPTTqNPEIEVP 68 89**********************************966****** PP AA3_2.hmm 48 g.lagsllgseldwnyttepqkglnnrsiklprGkvlGGssaiNa 91 ++ + + ++w++ ++pq++++n +i+l+r k+lGG+s +N+ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 69 IkEFEVYSNPMWEWGFVSTPQNHASNVTIPLARFKGLGGCSQHNG 113 615555566699********************************* PP AA3_2.hmm 92 mlytrgskadydaWaellgnegWswdnllpyfkksetftppdeeq 136 + gs++ yd+W + g++++++ +++ + e + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 114 EGFWLGSQYTYDKWPK-----GFKYRDFHQAVLQEEGCVS----- 148 **************95.....7999999998888888887..... PP AA3_2.hmm 137 deanitydasvhgtsGplkvsfp..eeasplskallealeelGvp 179 + hgt+Gpl++ + +p a+ +a+ ++G++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 149 ------FGLPNHGTTGPLHTLLDplDAIDPYLVAFKAAALQAGYR 187 ......45789********87763355999*************** PP AA3_2.hmm 180 tnkdlnsgdalGvslvpstidpttgtRssaatayldpv.ekrsnl 223 +n+d n+ a+G++ t+++ g+R + ++v + +nl 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 188 FNPDENAPLAKGYMPHVVTYKD--GRRFGPYGVF-KSVrGRLPNL 229 ************7777777777..9999999766.6661566*** PP AA3_2.hmm 224 tvltnatvtkilfdstk.......kkatGVevtk..kdg..kkyt 257 +v +n+tvt +lf + + k+tGV+ + +dg +++t 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 230 RVDLNTTVTGLLFGGGTdqdekkrLKITGVTADRvgRDGfeSNIT 274 *************999999999999*******9998554336899 PP AA3_2.hmm 258 vkarkEVILsaGainsPqlLmlSGiGpkeeLeklgIpvvvdlpgV 302 + ark V+++aGa+++Pq+Lm+SGiGpk+ L+++gI++ vdlpgV 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 275 YLARKAVVMAAGAYQTPQILMVSGIGPKDMLRNAGINLRVDLPGV 319 9******************************************** PP AA3_2.hmm 303 GenLqDhllvpvsfevke.pletldellsdptvaaealaeylank 346 G+ L+Dh +vp ++ + p ++dp++ ae+++ y+a++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 320 GKALKDHYAVPYIINSLQiP------PMNDPAFFAEQAQLYAATQ 358 **********9666555414......3579*************** PP AA3_2.hmm 347 tGpltssvsevlafvklpeilskeeksnlaslaaqeelladedvp 391 tG ++ s ++ +a+ ++ +++ + + dv 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 359 TGYFAWSPADHAAVTASTNGNQQNPF------------VP-VDVV 390 ***99766666666662222111111............11.1222 PP AA3_2.hmm 392 dlelvlvplalntaespaegknylsilvvllkplSrGsvklasad 436 + + p+ + p ++n + lvvl++p S G+v+++s + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 391 MVTF---PY----TFFPGFNANQILSLVVLTNPSSSGTVTVSSGS 428 2222...22....2224456789999******************* PP AA3_2.hmm 437 pldkplidpnylsdplDlevlvegvklarkiastkalkelvaeev 481 ++d+p+id ny+sdp D+evl +gv l+r+i++++al+++ +e 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 429 IYDPPVIDLNYFSDPQDFEVLYKGVDLLRQIVKQPALSQWFGSEL 473 ******************************************999 PP AA3_2.hmm 482 apgaevqsdeeleeyireslstvyHpvGTcamgpre.kggVVDse 525 p+ + ++ +++++ t+ Hp+GTc +g+++ +V D++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 474 FPDGA------DNTTLKAQVFTADHPMGTCMIGEDHeTFAVADHD 512 99843......2568999***************9998999***** PP AA3_2.hmm 526 lrVyGvknLRVvDaSvfPll....vsahtqatvyavAekaAd 563 + V+G+++L ++DaS + ++ ++a + atv+ vA+ +A+ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 513 AAVFGTSGLYIADASLIRTVdgatPNASIHATVILVARIVAN 554 *****************9862222667777788888877776 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 197.5 0.0 9.4e-62 9.4e-62 84 399 .. 17 554 .. 8 560 .. 0.81 Alignments for each domain: == domain 1 score: 197.5 bits; conditional E-value: 9.4e-62 AA3.hmm 84 tlskeeyDvvivGsGaaGsvlAsrLsea...gvlllEaGeedlne 125 +++ e DvvivG+G+aG+++A++++ +v +lEaG + +++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 17 QTRSEIDDVVIVGGGTAGLTVAYEIASRtnlRVRVLEAGDDPTTQ 61 55555669******************99***********887665 PP AA3.hmm 126 e.......kkl..ied.evklds.....tepq..lngrriilprg 153 k++ +++ + + ++pq ++ +i l+r 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 62 NpeievpiKEFevYSNpM----WewgfvSTPQnhASNVTIPLARF 102 566555442222222232....134558888875555555556** PP AA3.hmm 154 kvlGGsslinamvylrgqaedfdawaeegegwswddllpyfkkae 198 k+lGG+s +n+ +++ g++ +d+w + g +++d+ + + e 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 103 KGLGGCSQHNGEGFWLGSQYTYDKWPK---GFKYRDFHQAVLQEE 144 **********************99964...566777777777766 PP AA3.hmm 199 ell.......................................r.. 202 + r 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 145 GCVsfglpnhgttgplhtlldpldaidpylvafkaaalqagyRfn 189 555998888888887777777776666666666655555555055 PP AA3.hmm 203 ....................rrssaakayldplp.a.pnleiltn 225 r + ++++ + pnl++ n 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 190 pdenaplakgymphvvtykdGRRFGPYGVFKSVRgRlPNLRVDLN 234 5666666677777777778844444555666656469******** PP AA3.hmm 226 arvtkilf..............ag...............tlvaak 241 ++vt +lf +g t+ a+k 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 235 TTVTGLLFgggtdqdekkrlkiTGvtadrvgrdgfesniTYLARK 279 ********987777666655551166666667777777667**** PP AA3.hmm 242 eVilaaGaigspqlLllSgigpaee.eslgipvvvdlp.vgenlq 284 V+ aaGa+++pq+L+ Sgigp++ +++gi++ vdlp vg+ l+ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 280 AVVMAAGAYQTPQILMVSGIGPKDMlRNAGINLRVDLPgVGKALK 324 ********************************************* PP AA3.hmm 285 ............................................. 284 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 325 dhyavpyiinslqippmndpaffaeqaqlyaatqtgyfawspadh 369 ********************************************* PP AA3.hmm 285 ............................................. 284 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 370 aavtastngnqqnpfvpvdvvmvtfpytffpgfnanqilslvvlt 414 ********************************************9 PP AA3.hmm 285 apks..svrlnssdpldpplidpnylsderdvellvegvr..... 322 +p s +v+++s +dpp+id ny+sd++d e+l +gv 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 415 NPSSsgTVTVSSGSIYDPPVIDLNYFSDPQDFEVLYKGVDllrqi 459 888889999999999**************9999999999988877 PP AA3.hmm 323 ............eeetdd.........treeiqtiyHpvGtcrmg 346 e + ++ t+ Hp+Gtc++g 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 460 vkqpalsqwfgsE----LfpdgadnttLKAQVFTADHPMGTCMIG 500 7777666666551....0444455674555599999********* PP AA3.hmm 347 eddas.aVVdpnlrvhgvenLrvvDasvfPtilggnpnltivaia 390 ed ++ aV d++ v+g+++L+++Das + t g+ pn++i a 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 501 EDHETfAVADHDAAVFGTSGLYIADASLIRTVDGATPNASIHATV 545 **7776999********************9988899988888877 PP AA3.hmm 391 eraadlikk 399 +a+++++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 546 ILVARIVAN 554 766666665 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.9 0.1 3e-11 3e-11 8 137 .. 14 140 .. 9 147 .. 0.77 2 ! 108.7 0.0 8.1e-35 8.1e-35 190 536 .. 200 544 .. 177 559 .. 0.79 Alignments for each domain: == domain 1 score: 30.9 bits; conditional E-value: 3e-11 AA3_1.hmm 8 aatpvaketyDyivvGaGagGivvAdrLs.eagkkvLLlekGgps 51 +a+++++e D+++vG+G++G++vA ++ ++ +v +le G + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 14 VAAQTRSEIDDVVIVGGGTAGLTVAYEIAsRTNLRVRVLEAGDDP 58 4577888889***************8876489**********999 PP AA3_1.hmm 52 tyatggtekpewlentnltrfDvpg.lcneiladssgvactdtaq 95 t + ++ e+p + ++ ++ + + +++++ ++ a 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 59 TTQNPEIEVPIK--EFEVYSNPMWEwGFVSTPQNHASNVTIPLAR 101 999999666643..4455444444422222223344455666666 PP AA3_1.hmm 96 magcvlGGgtavNaglfvkpqasdfddkfpkgwksedvqdaa 137 + g lGG + N f+ ++ +d k+pkg+k+ d+++a+ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 102 FKG--LGGCSQHNGEGFWLGSQYTYD-KWPKGFKYRDFHQAV 140 666..9*******************6.9**********9997 PP == domain 2 score: 108.7 bits; conditional E-value: 8.1e-35 AA3_1.hmm 190 yghppfmisngerggPlatYLpsAkkrsNfklilntkVkrvv... 231 y + +++g+r gP + + +N + lnt+V+ + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 200 YMPHVVTYKDGRRFGPYGVFKSVRGRLPNLRVDLNTTVTGLLfgg 244 6677889**********************************9999 PP AA3_1.hmm 232 ......rsggkvtGVeve..ssgGqrevikvtkggrVilsAGals 268 ++ k+tGV+++ + +G +++i+ + ++V+++AGa + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 245 gtdqdeKKRLKITGVTADrvGRDGFESNITYLARKAVVMAAGAYQ 289 99988777789*******99999******999************* PP AA3_1.hmm 269 spkiLlrSGigpkdqlevvkasasdgvtliaksdwinlp.vGknl 312 +p+iL+ SGigpkd l+++ + ++lp vGk l 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 290 TPQILMVSGIGPKDMLRNAGI----NL-------RVDLPgVGKAL 323 ****************87762....22.......366655***** PP AA3_1.hmm 313 kdhpntdlkiktkeisaydfyealtspitedkdlylnqrsGilaq 357 kdh + i++ +i ++ + +e+++ly+ ++G +a 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 324 KDHYAVPYIINSLQIPPMNDP----AFFAEQAQLYAATQTGYFAW 364 **********99998888775....6788999**********997 PP AA3_1.hmm 358 aaqniifweevkgadgr.....vrqlqwtasvegsaaaaknnalt 397 + + + ++ +++ v + t ++ ++n++l+ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 365 SPADHAAVTASTNGNQQnpfvpVDVVMVTFPYTFFPGFNANQILS 409 766654444333333330222244555666666665555555555 PP AA3_1.hmm 398 vsvyltrgltSrGrleitakg..ntvvskkpylsdaeDkeavaqf 440 v lt+ ++S G++++++ + v + y+sd++D e++ ++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 410 -LVVLTNPSSS-GTVTVSSGSiyDPPVIDLNYFSDPQDFEVLYKG 452 .5789999966.******96656888999**************** PP AA3_1.hmm 441 ienliaalsaasgltlvspasnttvedlvksllvsvakrsanHwm 485 ++ l++ +++ + ++ + d ++ + + + + a+H m 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 453 VDLLRQIVKQPALSQWF---GSELFPDGADNTTLKAQVFTADHPM 494 **999999996544554...2222333334444466779****** PP AA3_1.hmm 486 gtaklGtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNps 530 gt+ +G+ d++ +v D ++ V+Gt L+++DAS++ ++ ++ p+ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 495 GTCMIGE-DHETFAVADHDAAVFGTSGLYIADASLIRTVDGATPN 538 ******6.59**************************998777666 PP AA3_1.hmm 531 aiimva 536 a i + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 539 ASIHAT 544 655433 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 91.2 0.0 1.4e-29 1.4e-29 4 315 .. 24 334 .. 21 371 .. 0.84 2 ! 6.0 0.0 0.00091 0.00091 404 462 .. 404 461 .. 379 473 .. 0.83 3 ! 17.3 0.1 3.3e-07 3.3e-07 516 568 .. 482 535 .. 476 556 .. 0.79 Alignments for each domain: == domain 1 score: 91.2 bits; conditional E-value: 1.4e-29 AA3_3.hmm 4 DviiaGgGtagcvvagRlaeadpnLkvllvegGkn.nlddplvvk 47 Dv+i+GgGtag va +a+ nL+v ++e+G++ ++++p++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 24 DVVIVGGGTAGLTVAYEIAS-RTNLRVRVLEAGDDpTTQNPEIEV 67 9*****************97.579*********99456899**** PP AA3_3.hmm 48 PalflsnlkpesktalfykaekseeldgRelivpaggvlGGGssi 92 P+ + ++ f+++ + ++ ++ ++ + + lGG s 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 68 PIKEFEVYSNPMWEWGFVSTPQ-NHASNVTIPLARFKGLGGCSQH 111 *998887776666666665554.4444555555555679****** PP AA3_3.hmm 93 nflmYtraqasDfdswkteGWsakdllpllkkletyqgkgdeevh 137 n + +++ +d+w +G++ d+ + + + e g h 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 112 NGEGFWLGSQYTYDKWP-KGFKYRDFHQAVLQEEGCVSFG-LPNH 154 ****************6.7**********99999987766.567* PP AA3_3.hmm 138 GkeGPikvskGtyts.krveddfleaaeelgipevdDlqdletsn 181 G++GP++ + + f +aa ++g++ D + + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 155 GTTGPLHTLLDPLDAiDPYLVAFKAAALQAGYRFNPDENAPLAKG 199 ******98877665415577889999999****999987766666 PP AA3_3.hmm 182 gveralryvsrdGrRqDaAhaylhpklksgkkpnLhvlveskvsr 226 + +++ y +dGrR +++ ++ g+ pnL v ++++v+ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 200 YMPHVVTY--KDGRRFGPYG--VFKSVR-GRLPNLRVDLNTTVTG 239 66777777..78***86544..455555.489************* PP AA3_3.hmm 227 vlf......enkravgvelvpnkafqkeaksksrtvkarklvvvs 265 +lf ++k+ + v+ ++ ++ +++ t+ ark+vv++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 240 LLFgggtdqDEKKRLKITGVTADRVGRDGFESNITYLARKAVVMA 284 *****99988899999999999999999999999*********** PP AA3_3.hmm 266 aGalgtPlvLeRsGiGakevLekagvkvvvdlpgvGenyqDHkll 310 aGa tP++L sGiG k++L++ag+++ vdlpgvG+ ++DH+ + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 285 AGAYQTPQILMVSGIGPKDMLRNAGINLRVDLPGVGKALKDHYAV 329 *******************************************98 PP AA3_3.hmm 311 lvpyr 315 ++ + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 330 PYIIN 334 77655 PP == domain 2 score: 6.0 bits; conditional E-value: 0.00091 AA3_3.hmm 404 ekkyltlsaftayPysrGsihitspdpeeeidFetgflkdkaDlk 448 +++ l+l + ++ P s G++ + s ++++++ + +++d++D++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 404 ANQILSLVV-LTNPSSSGTVTVSSGSIYDPPVIDLNYFSDPQDFE 447 555566555.557******************************** PP AA3_3.hmm 449 klvwaYkkqReiaR 462 l + R+i++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 448 VLYKGVDLLRQIVK 461 99999999999886 PP == domain 3 score: 17.3 bits; conditional E-value: 3.3e-07 AA3_3.hmm 516 wvrenvettWhslgtckmap.rekggvvdkkLnvyGvegLkvaDl 559 ++++v t+ h +gtc ++ +e+ +v d++ v+G+ gL +aD 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 482 TLKAQVFTADHPMGTCMIGEdHETFAVADHDAAVFGTSGLYIADA 526 67899*************8625668999***************** PP AA3_3.hmm 560 sivPenvga 568 s++ ga 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 527 SLIRTVDGA 535 *98654444 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 5.7 0.0 0.0018 0.0018 5 39 .. 24 59 .. 20 99 .. 0.89 2 ! 16.9 0.0 7.3e-07 7.3e-07 232 293 .. 233 313 .. 216 330 .. 0.65 3 ! 11.3 0.1 3.5e-05 3.5e-05 467 526 .. 490 550 .. 474 556 .. 0.81 Alignments for each domain: == domain 1 score: 5.7 bits; conditional E-value: 0.0018 AA3_4.hmm 5 dvliaGSGpiGatyArtlvd.aglkvlmveiGaqds 39 dv+i+G G G t A +++ ++l+v ++e G+ + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 24 DVVIVGGGTAGLTVAYEIASrTNLRVRVLEAGDDPT 59 9******************9789*********9755 PP == domain 2 score: 16.9 bits; conditional E-value: 7.3e-07 AA3_4.hmm 232 tetrctkl....eldeskek..kieaaevkdLlk....nkdllvk 266 +t +t l +d++++k ki+ ++ ++ + ++ ++ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 233 LNTTVTGLlfggGTDQDEKKrlKITGVTADRVGRdgfeSNITYLA 277 566666664333222323334577777777776655533355788 PP AA3_4.hmm 267 akvyviaaGavltpqiLanSgfgke.........ke 293 k++v+aaGa +tpqiL+ Sg+g + + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 278 RKAVVMAAGAYQTPQILMVSGIGPKdmlrnaginLR 313 89999*****************98655555555444 PP == domain 3 score: 11.3 bits; conditional E-value: 3.5e-05 AA3_4.hmm 467 alhitGttragkdket.svvdenskvwgfknLyvGGngvIptafa 510 a h Gt +g+d+et +v+d++ v+g++ Ly++ + I t + 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 490 ADHPMGTCMIGEDHETfAVADHDAAVFGTSGLYIADASLIRTVDG 534 66889*******765538************************999 PP AA3_4.hmm 511 aNPtlTsvafAikgae 526 a P a i a+ 558325|Neora1_GeneCatalog_proteins_20180718.aa.fasta|AA3_2|AA3_2 535 ATPNASIHATVILVAR 550 9998766666666555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (566 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.02 # Mc/sec: 75.33 // Query: 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 [L=932] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.9e-99 322.2 0.0 2.9e-99 321.6 0.0 1.1 1 AA3_2.hmm 5.9e-59 188.3 0.0 8.2e-59 187.8 0.0 1.1 1 AA3.hmm 1.5e-41 130.9 0.3 2.7e-31 97.0 0.0 2.1 2 AA3_1.hmm 2.5e-37 116.8 0.0 7.8e-30 92.1 0.0 3.3 3 AA3_3.hmm 1e-12 36.2 0.2 1.2e-06 16.1 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 321.6 0.0 2.9e-99 2.9e-99 4 563 .. 391 920 .. 391 923 .. 0.85 Alignments for each domain: == domain 1 score: 321.6 bits; conditional E-value: 2.9e-99 AA3_2.hmm 4 DYviVGGGtAGlvvAsrLsedpnvsVlviEaGgdeen.dplidvp 47 D viVGGGtAGl+vA ++ + n++V v+EaG+d+++ +p+i+vp 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 391 DVVIVGGGTAGLTVAYEIATHTNLKVRVLEAGDDPTAqNPEIEVP 435 89**********************************966****** PP AA3_2.hmm 48 glagsl.lgseldwnyttepqkglnnrsiklprGkvlGGssaiNa 91 + ++ ++ +++w++ ++pq++++n +i+l+r k+lGG+s +N+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 436 INEFNVsINPKWEWGFVSAPQNHASNVTIPLARFKGLGGCSQHNG 480 7655553888*********************************** PP AA3_2.hmm 92 mlytrgskadydaWaellgnegWswdnllpyfkksetftppdeeq 136 + gs++ yd+W + g++++++ +++ + e + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 481 AGFWLGSQYTYDKWPK-----GFKYSDFHQAVLQEEGCVS----- 515 **************95.....7889998888888887777..... PP AA3_2.hmm 137 deanitydasvhgtsGplkvsfp..eeasplskallealeelGvp 179 + + hgt+Gpl++ ++ +p a+ +a+ ++G++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 516 ------FGPPNHGTTGPLHTILDplDHIDPYLIAFKAAALQAGYR 554 ......56899********87763466999*************** PP AA3_2.hmm 180 tnkdlnsgdalGvslvpstidpttgtRssaatayldpvekrsnlt 224 +n+d n+ a+G ++p+ +++++g+R + + + + +nl+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 555 FNPDENAPLAKG--YMPHVVTNKDGRRFGPYGMFKSVMGRLPNLR 597 ********9999..788888888899999998886666778**** PP AA3_2.hmm 225 vltnatvtkilfdstk......kkatGVevtk..kdg..kkytvk 259 v +n+tvt +l + k+tGV+ + ++g +++t+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 598 VDLNTTVTGLLYGGGIdkdsknLKITGVTADHagSGGveSNITYL 642 **********9876656667889*********7733322588999 PP AA3_2.hmm 260 arkEVILsaGainsPqlLmlSGiGpkeeLeklgIpvvvdlpgVGe 304 ark V+++aGa+++Pq+Lm+SGiG+k++L+++gI+ + +lpgVG+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 643 ARKAVVMAAGAYQTPQILMVSGIGDKDTLNNAGINPMLHLPGVGK 687 ********************************************* PP AA3_2.hmm 305 nLqDhllvpvsfevke.pletldellsdptvaaealaeylanktG 348 nL+Dh ++p ++ + p ++dp++ a++++ y++++tG 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 688 NLKDHYALPYIINSLRiP------PMNDPAFFATQAQLYATTHTG 726 ********9665444314......3579***************** PP AA3_2.hmm 349 pltssvsevlafvklpeilskeeksnlaslaaqeella.dedvpd 392 ++ ++++ a+v+ ++ s++e l+ d +++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 727 YFAWPSADH-AVVSASTNGSQQE-----------PLVPvDVVMAT 759 999875444.3344222212221...........22222333444 PP AA3_2.hmm 393 lelvlvplalntaespaegknylsilvvllkplSrGsvklasadp 437 + + ++p+ +++ + l+++++p S G+v+++s ++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 760 FPYTFFPG---------FNASQIFSLIAVTNPGSSGTVTVSSDSV 795 44444444.........356788999999**************** PP AA3_2.hmm 438 ldkplidpnylsdplDlevlvegvklarkiastkalkelvaeeva 482 +d+p+id ny+s+p D+evl +g kl+r+i+++ l+++ +e + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 796 YDPPVIDLNYFSNPHDFEVLYKGEKLLRQIFNQTGLSQWFGSELS 840 ********************************************* PP AA3_2.hmm 483 pgaevqsdeeleeyireslstvyHpvGTcamgpre.kggVVDsel 526 pg + ++ +++++ t+ Hp+GTc +g+++ +V D e+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 841 PGGAD------NTTLKAQVFTADHPMGTCMIGQEHeTFAVADYEA 879 **542......467999***************9998999****** PP AA3_2.hmm 527 rVyGvknLRVvDaSvfPll....vsahtqatvyavAekaAd 563 V+G+++L ++DaS + ++ ++a + atv+ vA+ +A+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 880 AVFGTRGLYIADASLIRTVdgatPNASIHATVILVAKIVAN 920 ****************9862222666777788888877776 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 187.8 0.0 8.2e-59 8.2e-59 90 400 .. 390 921 .. 358 925 .. 0.80 Alignments for each domain: == domain 1 score: 187.8 bits; conditional E-value: 8.2e-59 AA3.hmm 90 yDvvivGsGaaGsvlAsrLsea...gvlllEaGeedlnee..... 126 DvvivG+G+aG+++A++++ +v +lEaG + + + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 390 DDVVIVGGGTAGLTVAYEIATHtnlKVRVLEAGDDPTAQNpeiev 434 59******************99***********887654455443 PP AA3.hmm 127 ..kklied.....evklds.......tepq..lngrriilprgkv 155 + + + + pq ++ +i l+r k+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 435 piN----EfnvsiN----PkwewgfvSAPQnhASNVTIPLARFKG 471 321....1222221....13344668788875555555556**** PP AA3.hmm 156 lGGsslinamvylrgqaedfdawaeegegwswddllpyfkkaeel 200 lGG+s +n+++++ g++ +d+w + g ++ d+ + + e 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 472 LGGCSQHNGAGFWLGSQYTYDKWPK---GFKYSDFHQAVLQEEGC 513 ********************99964...56677777777665555 PP AA3.hmm 201 l.......................................r.... 202 + r 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 514 VsfgppnhgttgplhtildpldhidpyliafkaaalqagyRfnpd 558 589888888887777777777666666666665555555505556 PP AA3.hmm 203 ..................rrssaakayldplp.a.pnleiltnar 227 r + ++++ + pnl++ n++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 559 enaplakgymphvvtnkdGRRFGPYGMFKSVMgRlPNLRVDLNTT 603 66666667777777777745555566667777569********** PP AA3.hmm 228 vtkilf.............ag...............tlvaakeVi 244 vt +l +g t+ a+k V+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 604 VTGLLYgggidkdsknlkiTGvtadhagsggvesniTYLARKAVV 648 ******88877776666661155566667777777667******* PP AA3.hmm 245 laaGaigspqlLllSgigpaee.eslgipvvvdlp.vgenlq... 284 aaGa+++pq+L+ Sgig+++ +++gi+ + +lp vg+nl+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 649 MAAGAYQTPQILMVSGIGDKDTlNNAGINPMLHLPgVGKNLKdhy 693 ********************************************* PP AA3.hmm 285 ............................................. 284 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 694 alpyiinslrippmndpaffatqaqlyatthtgyfawpsadhavv 738 ********************************************* PP AA3.hmm 285 ..........................................apk 287 +p 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 739 sastngsqqeplvpvdvvmatfpytffpgfnasqifsliavtNPG 783 ******************************************999 PP AA3.hmm 288 s..svrlnssdpldpplidpnylsderdvellvegvr........ 322 s +v+++s+ +dpp+id ny+s+++d e+l +g + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 784 SsgTVTVSSDSVYDPPVIDLNYFSNPHDFEVLYKGEKllrqifnq 828 988888888888***************999999999988887777 PP AA3.hmm 323 .........eeetdd.........treeiqtiyHpvGtcrmgedd 349 e + ++ t+ Hp+Gtc++g+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 829 tglsqwfgsE----LspggadnttLKAQVFTADHPMGTCMIGQEH 869 7776666641....0444445674555599999*********997 PP AA3.hmm 350 as.aVVdpnlrvhgvenLrvvDasvfPtilggnpnltivaiaera 393 ++ aV d + v+g+ +L+++Das + t g+ pn++i a + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 870 ETfAVADYEAAVFGTRGLYIADASLIRTVDGATPNASIHATVILV 914 775777779*****************9999999999998887777 PP AA3.hmm 394 adlikkd 400 a++++++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 915 AKIVANK 921 7777665 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.8 0.1 1.6e-11 1.6e-11 9 137 .. 382 507 .. 334 515 .. 0.82 2 ! 97.0 0.0 2.7e-31 2.7e-31 190 543 .. 567 921 .. 548 925 .. 0.77 Alignments for each domain: == domain 1 score: 31.8 bits; conditional E-value: 1.6e-11 AA3_1.hmm 9 atpvaketyDyivvGaGagGivvAdrLs.eagkkvLLlekGgpst 52 ++ +++ D+++vG+G++G++vA ++ ++ kv +le G +t 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 382 TAATRSVVDDVVIVGGGTAGLTVAYEIAtHTNLKVRVLEAGDDPT 426 4566666779**************9998689************** PP AA3_1.hmm 53 yatggtekpewlentnltrfDvpg..lcneiladssgvactdtaq 95 ++ ++ e+p + n++ + +++ +++ ++ a 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 427 AQNPEIEVPIN--EFNVSINPKWEwgFVSAPQN-HASNVTIPLAR 468 **999777754..44444433333214444433.44466666667 PP AA3_1.hmm 96 magcvlGGgtavNaglfvkpqasdfddkfpkgwksedvqdaa 137 + g lGG + N + f+ ++ +d k+pkg+k++d+++a+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 469 FKG--LGGCSQHNGAGFWLGSQYTYD-KWPKGFKYSDFHQAV 507 766..9*******************6.9**********9997 PP == domain 2 score: 97.0 bits; conditional E-value: 2.7e-31 AA3_1.hmm 190 yghppfmisngerggPlatYLpsAkkrsNfklilntkVkrvv... 231 y + ++g+r gP + + +N + lnt+V+ + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 567 YMPHVVTNKDGRRFGPYGMFKSVMGRLPNLRVDLNTTVTGLLygg 611 55556677899******************************9999 PP AA3_1.hmm 232 .....rsggkvtGVeve..ssgGqrevikvtkggrVilsAGalss 269 +++ k+tGV+++ +sgG +++i+ + ++V+++AGa ++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 612 gidkdSKNLKITGVTADhaGSGGVESNITYLARKAVVMAAGAYQT 656 9998888899*******88888999999999************** PP AA3_1.hmm 270 pkiLlrSGigpkdqlevvkasasdgvtliaksdwi.nlpvGknlk 313 p+iL+ SGig+kd+l+++ + + vGknlk 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 657 PQILMVSGIGDKDTLNNAGINP-----------MLhLPGVGKNLK 690 ***************8777333...........231246****** PP AA3_1.hmm 314 dhpntdlkiktkeisaydfyealtspitedkdlylnqrsGilaqa 358 dh + i++ i ++ + +++++ly++ ++G +a + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 691 DHYALPYIINSLRIPPMNDP----AFFATQAQLYATTHTGYFAWP 731 *********99999988875....66778999***********98 PP AA3_1.hmm 359 aqni.ifweevkgadgr....vrqlqwtasvegsaaaaknnaltv 398 + ++ +++g++++ v + t ++ ++ +++++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 732 SADHaVVSASTNGSQQEplvpVDVVMATFPYTFFPGFNASQIFSL 776 877744444555444332222455666666666666666666666 PP AA3_1.hmm 399 svyltrgltSrGrleitakg..ntvvskkpylsdaeDkeavaqfi 441 ++t+ S+G+++++++ + v + y+s+++D e++ ++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 777 I-AVTNPG-SSGTVTVSSDSvyDPPVIDLNYFSNPHDFEVLYKGE 819 5.555555.4599999997745778999***************97 PP AA3_1.hmm 442 enliaalsaasgltlvspasnttvedlvksllvsvakrsanHwmg 486 + l++ ++++ gl++ + ++ + + ++ + + + + a+H mg 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 820 KLLRQIFNQT-GLSQWFGSELSPGGA--DNTTLKAQVFTADHPMG 861 7777777765.666554443333322..2222356779******* PP AA3_1.hmm 487 taklGtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNpsa 531 t+ +G++ ++ +v D ++ V+Gt L+++DAS++ ++ ++ p+a 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 862 TCMIGQE-HETFAVADYEAAVFGTRGLYIADASLIRTVDGATPNA 905 *****76.99*************************9886666555 PP AA3_1.hmm 532 ....iimvaaekaaek 543 +++ +a+ a+k 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 906 sihaTVILVAKIVANK 921 0011455566666655 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 92.1 0.0 7.8e-30 7.8e-30 4 314 .. 391 699 .. 389 735 .. 0.82 2 ! 4.6 0.0 0.0023 0.0023 403 462 .. 769 827 .. 745 840 .. 0.83 3 ! 16.0 0.0 8.4e-07 8.4e-07 516 568 .. 848 901 .. 844 922 .. 0.77 Alignments for each domain: == domain 1 score: 92.1 bits; conditional E-value: 7.8e-30 AA3_3.hmm 4 DviiaGgGtagcvvagRlaeadpnLkvllvegGkn.nlddplvvk 47 Dv+i+GgGtag va +a+ nLkv ++e+G++ + ++p++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 391 DVVIVGGGTAGLTVAYEIAT-HTNLKVRVLEAGDDpTAQNPEIEV 434 9*****************96.689*********993468999999 PP AA3_3.hmm 48 PalflsnlkpesktalfykaekseeldgRelivpaggvlGGGssi 92 P+ n++ + k + ++++++ ++ ++ + + lGG s 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 435 PINEF-NVSINPKWEWGFVSAPQNHASNVTIPLARFKGLGGCSQH 478 98765.45556666666666777777676666666778******* PP AA3_3.hmm 93 nflmYtraqasDfdswkteGWsakdllpllkkletyqgkgdeevh 137 n + +++ +d+w +G++ d+ + + + e g h 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 479 NGAGFWLGSQYTYDKWP-KGFKYSDFHQAVLQEEGCVSFGP-PNH 521 ****************6.7***********99999887775.57* PP AA3_3.hmm 138 GkeGPikvskGt.ytskrveddfleaaeelgipevdDlqdletsn 181 G++GP++ + + f +aa ++g++ D + ++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 522 GTTGPLHTILDPlDHIDPYLIAFKAAALQAGYRFNPDENA-PLAK 565 ******966554155666788999999999**99988655.4445 PP AA3_3.hmm 182 gveralryvsrdGrRqDaAhaylhpklksgkkpnLhvlveskvsr 226 g+ ++ ++dGrR ++ + + g+ pnL v ++++v+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 566 GYMPHV-VTNKDGRRFGPYGMF-KSVM--GRLPNLRVDLNTTVTG 606 554433.357889998764443.4555..459************* PP AA3_3.hmm 227 vlf.....enkravgvelvpnkafqkeaksksrtvkarklvvvsa 266 +l+ +++ + v+ + + +++ t+ ark+vv++a 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 607 LLYgggidKDSKNLKITGVTADHAGSGGVESNITYLARKAVVMAA 651 ***8886545577777777777777777899999*********** PP AA3_3.hmm 267 GalgtPlvLeRsGiGakevLekagvkvvvdlpgvGenyqDHklll 311 Ga tP++L sGiG+k++L++ag++ + +lpgvG+n++DH+ l 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 652 GAYQTPQILMVSGIGDKDTLNNAGINPMLHLPGVGKNLKDHYALP 696 ******************************************987 PP AA3_3.hmm 312 vpy 314 ++ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 697 YII 699 765 PP == domain 2 score: 4.6 bits; conditional E-value: 0.0023 AA3_3.hmm 403 pekkyltlsaftayPysrGsihitspdpeeeidFetgflkdkaDl 447 ++++ ++l a + P s G++ + s ++++++ + ++++++D+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 769 NASQIFSLIAV-TNPGSSGTVTVSSDSVYDPPVIDLNYFSNPHDF 812 55566666554.56******************************* PP AA3_3.hmm 448 kklvwaYkkqReiaR 462 + l + k R+i+ 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 813 EVLYKGEKLLRQIFN 827 **9999999999976 PP == domain 3 score: 16.0 bits; conditional E-value: 8.4e-07 AA3_3.hmm 516 wvrenvettWhslgtckmapr.ekggvvdkkLnvyGvegLkvaDl 559 ++++v t+ h +gtc ++ e+ +v d + v+G++gL +aD 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 848 TLKAQVFTADHPMGTCMIGQEhETFAVADYEAAVFGTRGLYIADA 892 57899*************8761557999***************** PP AA3_3.hmm 560 sivPenvga 568 s++ ga 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 893 SLIRTVDGA 901 *98655444 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 5.5 0.0 0.0021 0.0021 5 39 .. 391 426 .. 388 469 .. 0.82 2 ! 16.1 0.0 1.2e-06 1.2e-06 247 305 .. 619 691 .. 583 695 .. 0.68 3 ! 10.7 0.1 5.3e-05 5.3e-05 467 528 .. 856 918 .. 841 922 .. 0.82 Alignments for each domain: == domain 1 score: 5.5 bits; conditional E-value: 0.0021 AA3_4.hmm 5 dvliaGSGpiGatyArtlvd.aglkvlmveiGaqds 39 dv+i+G G G t A +++ ++lkv ++e G+ + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 391 DVVIVGGGTAGLTVAYEIAThTNLKVRVLEAGDDPT 426 9*****************99789*********9765 PP == domain 2 score: 16.1 bits; conditional E-value: 1.2e-06 AA3_4.hmm 247 k.kieaaevkdLlk....nkdllvkakvyviaaGavltpqiLanS 286 + ki+ ++ + + ++ ++ k++v+aaGa +tpqiL+ S 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 619 NlKITGVTADHAGSggveSNITYLARKAVVMAAGAYQTPQILMVS 663 346666666665555553335577889999*************** PP AA3_4.hmm 287 gfgke.........keellpaLgkylte 305 g+g++ + +lp +gk+l + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 664 GIGDKdtlnnaginPMLHLPGVGKNLKD 691 **99888887777766677777887766 PP == domain 3 score: 10.7 bits; conditional E-value: 5.3e-05 AA3_4.hmm 467 alhitGttragk.dketsvvdenskvwgfknLyvGGngvIptafa 510 a h Gt +g+ +++ +v+d++ v+g++ Ly++ + I t + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 856 ADHPMGTCMIGQeHETFAVADYEAAVFGTRGLYIADASLIRTVDG 900 56889*******445569*************************99 PP AA3_4.hmm 511 aNPtlTsvafAikgaeki 528 a P a i a+ + 695397|Perma1_GeneCatalog_proteins_20141217.aa.fasta|AA3_2|AA3_2 901 ATPNASIHATVILVAKIV 918 999877777766666655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (932 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.02 # Mc/sec: 125.16 // [ok]