# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA3/fasta_for_each_cluster/cluster_230.txt # target HMM database: merged_hmms/AA3.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA3/AA3_cluster_230.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 [L=669] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-133 435.0 0.0 1.6e-133 434.7 0.0 1.0 1 AA3_2.hmm 2.5e-78 252.3 0.0 3.3e-78 251.9 0.0 1.0 1 AA3.hmm 1e-59 190.8 0.0 1.5e-59 190.2 0.0 1.2 1 AA3_3.hmm 6.2e-39 122.3 0.1 1.4e-14 41.9 0.0 3.4 3 AA3_1.hmm 5.9e-10 27.1 0.0 5e-06 14.1 0.0 2.9 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 434.7 0.0 1.6e-133 1.6e-133 2 567 .. 26 649 .. 25 650 .. 0.84 Alignments for each domain: == domain 1 score: 434.7 bits; conditional E-value: 1.6e-133 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsedpnv.sVlviEaGgdeendpli 44 syD+++VG+GtAG +A++L+ +p + sVl++E+G++ + +++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 26 SYDFIVVGAGTAGGYLAHKLATSPYApSVLLLENGPNTLS-NNT 68 8*********************98755********99876.455 PP AA3_2.hmm 45 dvpglagsl....lgs........eldwnyttepqkglnnrsik 76 ++p+ +l g+ + +++y+t+pqk+l++r + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 69 NNPADNPNLksliPGNfaenvarpDTNYMYKTVPQKHLDDRALV 112 5555444333333222334455569******************* PP AA3_2.hmm 77 lprGkvlGGssaiNamlytrgskadydaWaellgnegWswdnll 120 ++rG++lGG+s +N+m+++ g k+d+d+Wae g+++++ ++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 113 YHRGRGLGGTSNLNYMAWIKGYKGDFDEWAEIAGDQNYGSNEGW 156 ******************************************** PP AA3_2.hmm 121 pyfkksetftppdeeq.deanitydasvhgtsGplkvsfpeeas 163 + +k+ e+f p+ + e+ ++ d s hgt Gp++ + p++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 157 ERIKRLESFDPKGLPKaYEKYASPDMSNHGTMGPIHNTLPSNPL 200 ***********765555889999********************* PP AA3_2.hmm 164 plskallealeelGvptnkdlnsgdalGvslvpstidpttgtRs 207 p +++++ e+G+p+ d n g+++G++lv+ +i + g R 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 201 PGMGSFIDGCVEAGIPRALDTNCGQNIGAGLVNMAIYK--GARV 242 **************************************..**** PP AA3_2.hmm 208 saatayldp.......vekrsnltvltnatvtkilfdstkkkat 244 s+at+ l++ +++ +nl++ t++ v+ki+fd++ +a+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 243 SSATQCLNEegdigcgLTRPRNLEIRTDTKVEKIIFDHK--TAI 284 ********8888887667899******************..9** PP AA3_2.hmm 245 GVevtkkdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeL 288 GV+v+ g+ ++ a+kE+I+saG i+sP+lL+lSGiGpk++L 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 285 GVQVEG--GR--KFFAKKEIIISAGFIDSPKLLLLSGIGPKADL 324 ****98..65..79****************************** PP AA3_2.hmm 289 eklgIpvvvdlpgVGenLqDhllvpvsfevkepl..etldells 330 ++lgI+vv d p+VG+n+ Dh +v + +k++l +t + l+s 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 325 QELGIKVVLDSPNVGKNMLDHSTVLLDPIFKQDLqvPTGNLLFS 368 ***********************99876666654338888899* PP AA3_2.hmm 331 dptvaaealaeylan.......ktGpltssv.sevlafvklpei 366 +p++ +++ + ++ + ++G +++ + s +af+k 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 369 EPARVEAEKKLWIDTyrngkgeARGEMARFGaSAGVAFIK---- 408 ************9865443333335555444345556666.... PP AA3_2.hmm 367 lskeeksnlasla.......aqeelladedvpdlelvlvplaln 403 +++ee ++++ ++++ +d+ pd e++++ ++ + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 409 FTEEER---DQWPewqalsdEDRTRFLDKGRPDTEIFYLLGYKP 449 444444...3333333554433444449**********877666 PP AA3_2.hmm 404 taes...paegknylsilvvllkplSrGsvklasadpldkplid 444 + +++ ++y+ + ++ ++ l rG+++l+s+dp+d+p+id 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 450 PGKDfpeDTAPNSYARLFLLQQNHLARGTISLNSSDPSDAPVID 493 6655855333479******************************* PP AA3_2.hmm 445 pnylsdplDlevlvegvklarkiastkalkel.vaeeva..... 482 p+y+s+p+D+++ ve +k a +i++tkal+++ v e + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 494 PQYFSHPYDVRISVETIKKAVEIFKTKALSAHfVGMEFKgcaed 537 *****************************986243333333333 PP AA3_2.hmm 483 pg........................aevq...sdeeleeyire 499 p +d+ +e ++r+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 538 PAwiqdspkkaeenrlkaeqnggfyiN--GiemTDKGIEHWLRN 579 225555555666667666666666542..03349********** PP AA3_2.hmm 500 sl.stvyHpvGTcamgpre.kggVVDselrVyGvknLRVvDaSv 541 + + yH +GT +mg+ k+ VVDs+ rV Gv++LRV+D+Sv 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 580 KGlDQGYHGMGTLRMGKAGdKMRVVDSKGRVVGVDGLRVADTSV 623 8779*************999************************ PP AA3_2.hmm 542 fPllvsahtqatvyavAekaAdlIke 567 +P++++ h+q +y +A +Ad I++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 624 IPVVMNNHPQVSAYLIADVVADGILR 649 **********************9986 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 251.9 0.0 3.3e-78 3.3e-78 87 407 .. 24 657 .. 14 665 .. 0.86 Alignments for each domain: == domain 1 score: 251.9 bits; conditional E-value: 3.3e-78 AA3.hmm 87 keeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlnee 126 e+yD+++vG+G+aG+ lA++L+ + +vlllE+G++ l + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 24 SESYDFIVVGAGTAGGYLAHKLATSpyapSVLLLENGPNTLSNN 67 689***********************************987766 PP AA3.hmm 127 .......kklied......evklds...............tepq 142 + + + + t+pq 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 68 tnnpadnP----NlkslipG----NfaenvarpdtnymykTVPQ 103 66544331....12223331....13344445556889999999 PP AA3.hmm 143 ..lngrriilprgkvlGGsslinamvylrgqaedfdawaee.g. 182 l++r + + rg++lGG+s+ n+m +++g + dfd+wae g 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 104 khLDDRALVYHRGRGLGGTSNLNYMAWIKGYKGDFDEWAEIaGd 147 99999999999*****************************9876 PP AA3.hmm 183 egwswddllpyfkkaeell......................... 201 ++++ ++ + k++e++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 148 QNYGSNEGWERIKRLESFDpkglpkayekyaspdmsnhgtmgpi 191 6688899999******9999999999888888888777777777 PP AA3.hmm 202 ............r............................... 202 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 192 hntlpsnplpgmGsfidgcveagipraldtncgqnigaglvnma 235 66666665555505555566666666677777777888888888 PP AA3.hmm 203 ....rrssaakayldplpa........pnleiltnarvtkilf. 233 +r s+a+ l++ + nlei+t+++v+ki+f 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 236 iykgARVSSATQCLNEEGDigcgltrpRNLEIRTDTKVEKIIFd 279 8999888888888888555569999999***************9 PP AA3.hmm 234 ..........agtl.vaakeVilaaGaigspqlLllSgigpaee 266 g+ +a+ke+i++aG i sp+lLllSgigp+++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 280 hktaigvqveGGRKfFAKKEIIISAGFIDSPKLLLLSGIGPKAD 323 988876665433455***************************** PP AA3.hmm 267 .eslgipvvvdlp.vgenlq........................ 284 ++lgi+vv d p vg+n+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 324 lQELGIKVVLDSPnVGKNMLdhstvlldpifkqdlqvptgnllf 367 ******************************************** PP AA3.hmm 285 ............................................ 284 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 368 separveaekklwidtyrngkgeargemarfgasagvafikfte 411 ******************************************** PP AA3.hmm 285 ............................................ 284 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 412 eerdqwpewqalsdedrtrfldkgrpdteifyllgykppgkdfp 455 ******************************************** PP AA3.hmm 285 .................apks...svrlnssdpldpplidpnyl 308 + ++ lnssdp d+p+idp+y+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 456 edtapnsyarlfllqqnH--LargTISLNSSDPSDAPVIDPQYF 497 *************86652..14579******************* PP AA3.hmm 309 sderdvellvegvr.............................. 322 s++ dv+ ve ++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 498 SHPYDVRISVETIKkaveifktkalsahfvgmefkgcaedpawi 541 **999988888888888899999**************9999999 PP AA3.hmm 323 ......................eeetdd...........tree. 332 + r++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 542 qdspkkaeenrlkaeqnggfyiN----GiemtdkgiehwLRNKg 581 98888777766666666665541....04444558999999999 PP AA3.hmm 333 iqtiyHpvGtcrmged.dasaVVdpnlrvhgvenLrvvDasvfP 375 +yH +Gt rmg+ d++ VVd+++rv gv++Lrv+D sv+P 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 582 LDQGYHGMGTLRMGKAgDKMRVVDSKGRVVGVDGLRVADTSVIP 625 **************99**************************** PP AA3.hmm 376 tilggnpnltivaiaeraadlikkdngkqlye 407 +p+ +++ ia +ad i+ d+ + ++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 626 VVMNNHPQVSAYLIADVVADGILRDHAASGKR 657 ***********************998776544 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 190.2 0.0 1.5e-59 1.5e-59 2 587 .. 26 649 .. 25 651 .. 0.78 Alignments for each domain: == domain 1 score: 190.2 bits; conditional E-value: 1.5e-59 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddpl. 44 +D i++G+Gtag+ a +la++ +vll+e+G+n+l +++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 26 SYDFIVVGAGTAGGYLAHKLATSPYAPSVLLLENGPNTLSNNTn 69 69*********************************986543321 PP AA3_3.hmm 45 .......v..vkPalflsnlkpesktalfykaekseeldgReli 79 + P f +n+ + +t +yk+ ++++ld+R+l+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 70 npadnpnLksLIPGNFAENVARP-DTNYMYKTVPQKHLDDRALV 112 11011113113466777776655.5667899************* PP AA3_3.hmm 80 vpaggvlGGGssinflmYtraqasDfdsw..........kteGW 113 g lGG s +n++ + ++ + Dfd+w ++eGW 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 113 YHRGRGLGGTSNLNYMAWIKGYKGDFDEWaeiagdqnygSNEGW 156 *****************************877755554445555 PP AA3_3.hmm 114 sakdllpllkkletyqgkg...........deevhGkeGPikvs 146 + +k+le++ kg d++ hG+ GPi+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 157 ------ERIKRLESFDPKGlpkayekyaspDMSNHGTMGPIHNT 194 ......555555555444444344444466899*********99 PP AA3_3.hmm 147 kGtytskrveddfleaaeelgipevdDlqdletsngveralryv 190 + + +f+++ e+gip+ D + ++ g+ + + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 195 LPSNPLP-GMGSFIDGCVEAGIPRALDTNCGQNI-GAGLVNMAI 236 9999999.7899***************9776654.444433333 PP AA3_3.hmm 191 srdGrRqDaAhaylhpklksg....kkpnLhvlveskvsrvlfe 230 +G R +A++ l ++ + g + nL++ +++kv++++f+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 237 -YKGARVSSATQCLNEEGDIGcgltRPRNLEIRTDTKVEKIIFD 279 .48***********99877642232578**************** PP AA3_3.hmm 231 nkravgvelvpnkafqkeaksksrtvkarklvvvsaGalgtPlv 274 k a+gv+++ ++f a+k +++saG + +P++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 280 HKTAIGVQVEGGRKF-----------FAKKEIIISAGFIDSPKL 312 *******99877665...........4689************** PP AA3_3.hmm 275 LeRsGiGakevLekagvkvvvdlpgvGenyqDHklllv..pyra 316 L sGiG k+ L+++g+kvv d p vG+n DH ++l ++++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 313 LLLSGIGPKADLQELGIKVVLDSPNVGKNMLDHSTVLLdpIFKQ 356 *********************************99886335777 PP AA3_3.hmm 317 alepsetldallrgrkdveealk...........ekkgilgtng 349 l+ t + l + + ve + k e +g ++ g 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 357 DLQ-VPTGNLLFSEPARVEAEKKlwidtyrngkgEARGEMARFG 399 754.5566666665555544444558899999988899999999 PP AA3_3.hmm 350 idvgvklRPteeevealgpeFkeawdrdfknkpdk..plmllav 391 +gv + +ee ++ pe+++ d+d ++ dk p + + + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 400 ASAGVAFIKFTEEERDQWPEWQALSDEDRTRFLDKgrPDTEIFY 443 9999987665555566679****999996654443115444444 PP AA3_3.hmm 392 vagfl..gd..pslvpekkyltlsaftayPysrGsihitspdpe 431 + g+ g+ p++ ++ y l+ + +rG+i s+dp+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 444 LLGYKppGKdfPEDTAPNSYARLFLLQQNHLARGTISLNSSDPS 487 444431122236677999************************** PP AA3_3.hmm 432 eeidFetgflkdkaDlkklvwaYkkqReiaRRmd...vyrg.el 471 +++ + +++++ D++ +v + kk ei++ + g e+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 488 DAPVIDPQYFSHPYDVRISVETIKKAVEIFKTKAlsaHFVGmEF 531 *****************************986541114555456 PP AA3_3.hmm 472 a..aahPkfakgskaalveldaekkeskkkvedieYtaeDdaai 513 + a P++ ++s+ +++e k++++ i+ + d+ i 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 532 KgcAEDPAWIQDSPKKAEEN--RLKAEQNGGFYINGIEMTDKGI 573 5335689*****99999888..3444555555677778889*** PP AA3_3.hmm 514 edwvren.vettWhslgtckmapr.ekggvvdkkLnvyGvegLk 555 e+w+r++ ++ +h +gt +m+ +k vvd+k v Gv+gL+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 574 EHWLRNKgLDQGYHGMGTLRMGKAgDKMRVVDSKGRVVGVDGLR 617 *****8769************75527789*************** PP AA3_3.hmm 556 vaDlsivPenvgantnstallvGekaadiilk 587 vaD s++P + + +a+l+ + ad il+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 618 VADTSVIPVVMNNHPQVSAYLIADVVADGILR 649 ********999999999999999988887665 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.9 0.0 1.4e-14 1.4e-14 10 124 .. 20 141 .. 11 167 .. 0.71 2 ! 39.9 0.0 5.4e-14 5.4e-14 217 321 .. 263 351 .. 257 398 .. 0.79 3 ! 36.5 0.1 6.1e-13 6.1e-13 470 545 .. 575 648 .. 457 651 .. 0.77 Alignments for each domain: == domain 1 score: 41.9 bits; conditional E-value: 1.4e-14 AA3_1.hmm 10 tpvaketyDyivvGaGagGivvAdrLsea..gkkvLLlekGgps 51 + + +e+yD+ivvGaG++G +A++L+ + +vLLle+G+ + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 20 SAAYSESYDFIVVGAGTAGGYLAHKLATSpyAPSVLLLENGPNT 63 5677899*******************98733579*******766 PP AA3_1.hmm 52 tyatggt..ekpewle.......ntnltrfDvpglcneiladss 86 + + ++ ++p+ l+ +n++r D +++++ ++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 64 LSNNTNNpaDNPN-LKslipgnfAENVARPDTNYMYKTVPQK-- 104 6555444322222.2223333334455555555555444332.. PP AA3_1.hmm 87 gvactdta..qmagcvlGGgtavNaglfvkpqasdfddkf 124 d a g lGG + +N++ ++k + dfd+ + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 105 --HLDDRAlvYHRGRGLGGTSNLNYMAWIKGYKGDFDE-W 141 ..22333366889***********************84.4 PP == domain 2 score: 39.9 bits; conditional E-value: 5.4e-14 AA3_1.hmm 217 sNfklilntkVkrvvrsggkvtGVevessgGqrevikvtkggrV 260 N +++++tkV++++ +++ GV+ve gG +k +++++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 263 RNLEIRTDTKVEKIIFDHKTAIGVQVE--GG----RKFFAKKEI 300 5899***********************..55....4555789** PP AA3_1.hmm 261 ilsAGalsspkiLlrSGigpkdqlevvkasasdgvtliaksdwi 304 i+sAG + spk+Ll SGigpk+ l+ + + + + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 301 IISAGFIDSPKLLLLSGIGPKADLQELGIKV------VLD---- 334 ************************8877333......222.... PP AA3_1.hmm 305 nlpvGknlkdhpntdlk 321 + +vGkn+ dh+ + l+ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 335 SPNVGKNMLDHSTVLLD 351 45788888888888776 PP == domain 3 score: 36.5 bits; conditional E-value: 6.1e-13 AA3_1.hmm 470 ksllvsvakrsanHwmgtaklGtddsggtsvvDlntkVyGtdNL 513 + l + + ++ H mgt ++G+ + ++ +vvD + +V+G+d L 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 575 HWL-RNKGLDQGYHGMGTLRMGK-AGDKMRVVDSKGRVVGVDGL 616 333.6778899***********6.59999*************** PP AA3_1.hmm 514 fVvDASifpdlptgNpsaiimvaaekaaekil 545 V+D S++p ++ p++ +a+ a il 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 617 RVADTSVIPVVMNNHPQVSAYLIADVVADGIL 648 *************************9999998 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.6 0.0 0.061 0.061 3 38 .. 26 63 .. 24 109 .. 0.82 2 ! 8.4 0.0 0.00028 0.00028 227 312 .. 264 351 .. 240 382 .. 0.69 3 ! 14.1 0.0 5e-06 5e-06 468 522 .. 586 641 .. 570 650 .. 0.86 Alignments for each domain: == domain 1 score: 0.6 bits; conditional E-value: 0.061 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqd 38 ++d +++G+G G A++l+ +vl++e G ++ 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 26 SYDFIVVGAGTAGGYLAHKLATspYAPSVLLLENGPNT 63 6899*****************95546689999999864 PP == domain 2 score: 8.4 bits; conditional E-value: 0.00028 AA3_4.hmm 227 kfeLltetrctkleldeskekkieaaevkdLlknkdllvkakvy 270 ++e++t+t+++k+ d++ + + +++ +++ k + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 264 NLEIRTDTKVEKIIFDHK--T-AIGV---QVEGGRKF-FAKKEI 300 667777777777766652..1.1222...23334444.566889 PP AA3_4.hmm 271 viaaGavltpqiLanSgfgke.........keellpaLgkylte 305 +i+aG + +p++L Sg+g + p++gk++ + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 301 IISAGFIDSPKLLLLSGIGPKadlqelgikVVLDSPNVGKNMLD 344 ******************99766666666533455666777777 PP AA3_4.hmm 306 qsmafcq 312 +s+++ + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 345 HSTVLLD 351 7666555 PP == domain 3 score: 14.1 bits; conditional E-value: 5e-06 AA3_4.hmm 468 lhitGttragk.dketsvvdenskvwgfknLyvGGngvIptafa 510 h Gt r+gk ++ vvd++++v g++ L v+ +vIp + 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 586 YHGMGTLRMGKaGDKMRVVDSKGRVVGVDGLRVADTSVIPVVMN 629 5889*******768999************************999 PP AA3_4.hmm 511 aNPtlTsvafAi 522 P + + +A 551583|Morsny1_GeneCatalog_proteins_20180419.aa.fasta|AA3_2|AA3_2 630 NHPQVSAYLIAD 641 999988887775 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (669 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.02 # Mc/sec: 84.90 // Query: 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 [L=585] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.1e-129 420.2 0.0 4.6e-129 420.0 0.0 1.0 1 AA3_2.hmm 1.9e-73 236.2 0.0 2.5e-73 235.8 0.0 1.0 1 AA3.hmm 6e-55 175.0 0.0 6.6e-47 148.4 0.0 2.2 2 AA3_3.hmm 1.1e-38 121.5 0.0 1.4e-14 41.9 0.0 3.1 3 AA3_1.hmm 3.8e-09 24.4 0.0 0.00011 9.7 0.0 3.0 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 420.0 0.0 4.6e-129 4.6e-129 2 546 .. 12 583 .. 11 584 .. 0.85 Alignments for each domain: == domain 1 score: 420.0 bits; conditional E-value: 4.6e-129 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsedpn.vsVlviEaGgdeendplidvpglags 52 syD+++VG+GtAG +A++L+ +p sVl++E+G++ + +++++p+ + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 12 SYDFIVVGAGTAGGYLAHKLATSPYsPSVLLLENGPNTLS-NNTNNPADNPN 62 8*********************87527********99876.45555554443 PP AA3_2.hmm 53 l....lgs........eldwnyttepqkglnnrsiklprGkvlGGssaiNam 92 l g+ + +++y+t+pqk+l++r++ ++rG++lGG+s +N+m 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 63 LksliPGNfaenvarpDTNYMYKTVPQKHLDDRVLVYHRGRGLGGTSNLNYM 114 33333222334455569*********************************** PP AA3_2.hmm 93 lytrgskadydaWaellgnegWswdnllpyfkksetftppdeeq.deanity 143 +++ g k+d+d+Wae +g+++++ ++ + +k+ e+f p+ + e+ ++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 115 AWIKGYKGDFDEWAEIVGDQNYGSNEGWERIKRLESFDPKGLPKaYEKYASP 166 ***************************************765555889999* PP AA3_2.hmm 144 dasvhgtsGplkvsfpeeasplskallealeelGvptnkdlnsgdalGvslv 195 d s+hgt Gp++ + p++ p +++++ e+G+p+ d n g+++G++lv 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 167 DMSSHGTMGPIHNTLPTNPLPGMGSFIDGCVEAGIPRALDTNCGQNIGAGLV 218 **************************************************** PP AA3_2.hmm 196 pstidpttgtRssaatayldp.......vekrsnltvltnatvtkilfdstk 240 + +i + g R s+at+ l++ + + +nl+v t++ v+kilfd++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 219 NMAIYK--GARVSSATQCLNEegdigtgLIRPRNLEVRTDTKVEKILFDHK- 267 ******..************8777766556799******************. PP AA3_2.hmm 241 kkatGVevtkkdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeLeklg 292 +a+GV+v+ g+ ++ a+kEVI+saG i+sP+lL+lSGiGpk++L++lg 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 268 -TAIGVQVEG--GR--KFFAKKEVIISAGFIDSPKLLLLSGIGPKADLQELG 314 .9******98..65..79********************************** PP AA3_2.hmm 293 IpvvvdlpgVGenLqDhllvpvsfevkepl..etldellsdptvaaealaey 342 I+vv+d p+VG+n+ Dh +v + +k++l +t + l+s+p++ +++ + + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 315 IKVVHDSPNVGKNMLDHSTVLLDPIFKQDLqvPTGNLLFSEPARVDAEKKLW 366 *******************99876666654338888899************* PP AA3_2.hmm 343 lan.......ktGpltssv.sevlafvklpeilskeeksnlasla....... 379 l + ++G +++ + s +af+k +++ee ++++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 367 LDTyqngkgeARGEMARFGaSAGVAFIK----FTEEER---EQWPewqalsd 411 9864443333335555444344555555....444444...23332225545 PP AA3_2.hmm 380 aqeelladedvpdlelvlvplalntaes...paegknylsilvvllkplSrG 428 ++++ +d+ pd e++++ ++ + + ++ ++y+ + ++ ++ l rG 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 412 EDRSRFLDKGRPDTEIFYLIGYKPPGKDfpeGTSPNSYARLFLLHQNHLARG 463 44445559**********8776666666765233369*************** PP AA3_2.hmm 429 svklasadpldkplidpnylsdplDlevlvegvklarkiastkalkelva.e 479 +++l+s++p+d+p+idp+y+s+p+D+++ +e +k a +i++tkal+++ + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 464 TISLNSSNPSDAPVIDPQYFSHPYDVRISIETIKKAVEIFKTKALSAHFNgG 515 *********************************************9966537 PP AA3_2.hmm 480 evapgaevqsdeeleeyiresl.stvyHpvGTcamgpre.kggVVDselrVy 529 + g ++ +d+ +e +++++ + yH +GT +mg+ k+ VVDs+ rV 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 516 FYVNGIDM-TDKGIEHWLKSKGlDQGYHGMGTLRMGKAGdKMRVVDSKGRVV 566 77788885.9*********98779*************999************ PP AA3_2.hmm 530 GvknLRVvDaSvfPllv 546 Gv++LR++D+Sv+P+++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 567 GVDGLRIADTSVIPVVM 583 **************975 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 235.8 0.0 2.5e-73 2.5e-73 87 375 .. 10 580 .. 5 583 .. 0.86 Alignments for each domain: == domain 1 score: 235.8 bits; conditional E-value: 2.5e-73 AA3.hmm 87 keeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlnee.......k 127 e+yD+++vG+G+aG+ lA++L+ + +vlllE+G++ l + + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 10 SESYDFIVVGAGTAGGYLAHKLATSpyspSVLLLENGPNTLSNNtnnpadnP 61 689***********************************98776666544331 PP AA3.hmm 128 klied......evklds...............tepq..lngrriilprgkvl 156 + + + t+pq l++r + + rg++l 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 62 ----NlkslipG----NfaenvarpdtnymykTVPQkhLDDRVLVYHRGRGL 105 ....12223331....1334444555688999999999999999999***** PP AA3.hmm 157 GGsslinamvylrgqaedfdawaee.g.egwswddllpyfkkaeell..... 201 GG+s+ n+m +++g + dfd+wae g ++++ ++ + k++e++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 106 GGTSNLNYMAWIKGYKGDFDEWAEIvGdQNYGSNEGWERIKRLESFDpkglp 157 *************************9767788899999******99999999 PP AA3.hmm 202 ................................r................... 202 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 158 kayekyaspdmsshgtmgpihntlptnplpgmGsfidgcveagipraldtnc 209 9888888888877777777766666665555505555566666666677777 PP AA3.hmm 203 ................rrssaakayldplpa........pnleiltnarvtk 230 +r s+a+ l++ + nle++t+++v+k 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 210 gqnigaglvnmaiykgARVSSATQCLNEEGDigtglirpRNLEVRTDTKVEK 261 7778888888888999888888888888544568999999************ PP AA3.hmm 231 ilf...........agtl.vaakeVilaaGaigspqlLllSgigpaee.esl 269 ilf g+ +a+keVi++aG i sp+lLllSgigp+++ ++l 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 262 ILFdhktaigvqveGGRKfFAKKEVIISAGFIDSPKLLLLSGIGPKADlQEL 313 ***9988876665433455********************************* PP AA3.hmm 270 gipvvvdlp.vgenlq.................................... 284 gi+vv+d p vg+n+ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 314 GIKVVHDSPnVGKNMLdhstvlldpifkqdlqvptgnllfseparvdaekkl 365 **************************************************** PP AA3.hmm 285 .................................................... 284 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 366 wldtyqngkgeargemarfgasagvafikfteeereqwpewqalsdedrsrf 417 **************************************************** PP AA3.hmm 285 ........................................apks....svrl 292 + ++ l 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 418 ldkgrpdteifyligykppgkdfpegtspnsyarlfllhqN--HlargTISL 467 *************************************9651..34568**** PP AA3.hmm 293 nssdpldpplidpnylsderdvellvegvr...................... 322 nss+p d+p+idp+y+s++ dv+ +e ++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 468 NSSNPSDAPVIDPQYFSHPYDVRISIETIKkaveifktkalsahfnggfyvn 519 ******************9899888888887766777777777777777654 PP AA3.hmm 323 .eee.tdd.....tree.iqtiyHpvGtcrmged.dasaVVdpnlrvhgven 365 + td+ +++ +yH +Gt rmg+ d++ VVd+++rv gv++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 520 gI-DmTDKgiehwLKSKgLDQGYHGMGTLRMGKAgDKMRVVDSKGRVVGVDG 570 31.13444888998888899************99****************** PP AA3.hmm 366 LrvvDasvfP 375 Lr++D sv+P 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 571 LRIADTSVIP 580 *********9 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 148.4 0.0 6.6e-47 6.6e-47 2 462 .. 12 504 .. 11 519 .. 0.78 2 ! 24.5 0.1 2.3e-09 2.3e-09 510 563 .. 525 580 .. 517 583 .. 0.89 Alignments for each domain: == domain 1 score: 148.4 bits; conditional E-value: 6.6e-47 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddpl........v 45 +D i++G+Gtag+ a +la++ + +vll+e+G+n+l +++ + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 12 SYDFIVVGAGTAGGYLAHKLATSPYSPSVLLLENGPNTLSNNTnnpadnpnL 63 69*********************************98654332111011113 PP AA3_3.hmm 46 ..vkPalflsnlkpesktalfykaekseeldgRelivpaggvlGGGssinfl 95 P f +n+ + +t +yk+ ++++ld+R l+ g lGG s +n++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 64 ksLIPGNFAENVARP-DTNYMYKTVPQKHLDDRVLVYHRGRGLGGTSNLNYM 114 113466777776655.5667899***************************** PP AA3_3.hmm 96 mYtraqasDfdsw..........kteGWsakdllpllkkletyqgkg..... 132 + ++ + Dfd+w ++eGW+ +k+le++ kg 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 115 AWIKGYKGDFDEWaeivgdqnygSNEGWE------RIKRLESFDPKGlpkay 160 *************8887555555555665......55554444444333333 PP AA3_3.hmm 133 ......deevhGkeGPikvskGtytskrveddfleaaeelgipevdDlqdle 178 d++ hG+ GPi+ t + +f+++ e+gip+ D + + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 161 ekyaspDMSSHGTMGPIHNTLPTNPLP-GMGSFIDGCVEAGIPRALDTNCGQ 211 333456899************999999.7899***************97766 PP AA3_3.hmm 179 tsngveralryvsrdGrRqDaAhaylhpklksgk....kpnLhvlveskvsr 226 + g+ + + +G R +A++ l ++ + g+ nL+v +++kv++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 212 NI-GAGLVNMAI-YKGARVSSATQCLNEEGDIGTglirPRNLEVRTDTKVEK 261 54.444433333.48************9987765223268************ PP AA3_3.hmm 227 vlfenkravgvelvpnkafqkeaksksrtvkarklvvvsaGalgtPlvLeRs 278 +lf+ k a+gv+++ ++f a+k v++saG + +P++L s 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 262 ILFDHKTAIGVQVEGGRKF-----------FAKKEVIISAGFIDSPKLLLLS 302 ***********99876665...........4689****************** PP AA3_3.hmm 279 GiGakevLekagvkvvvdlpgvGenyqDHklllv..pyraalepsetldall 328 GiG k+ L+++g+kvv d p vG+n DH ++l ++++ l+ t + l 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 303 GIGPKADLQELGIKVVHDSPNVGKNMLDHSTVLLdpIFKQDLQ-VPTGNLLF 353 *****************************99886335788864.45556555 PP AA3_3.hmm 329 rgr..kdveealk.........ekkgilgtngidvgvklRPteeevealgpe 369 + d+e++l e +g ++ g +gv + +ee ++ pe 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 354 SEParVDAEKKLWldtyqngkgEARGEMARFGASAGVAFIKFTEEEREQWPE 405 5441145555554789999988889999999999999866655555666799 PP AA3_3.hmm 370 Fkeawdrdfknkpd..kplmllavvagflgd....pslvpekkyltlsafta 415 +++ d+d ++ d +p + + ++ g+ p+ +++ y l+ + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 406 WQALSDEDRSRFLDkgRPDTEIFYLIGYKPPgkdfPEGTSPNSYARLFLLHQ 457 **99999866544411454444444444433011245558999********* PP AA3_3.hmm 416 yPysrGsihitspdpeeeidFetgflkdkaDlkklvwaYkkqReiaR 462 +rG+i s++p++++ + +++++ D++ ++ + kk ei++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 458 NHLARGTISLNSSNPSDAPVIDPQYFSHPYDVRISIETIKKAVEIFK 504 *****************************************999986 PP == domain 2 score: 24.5 bits; conditional E-value: 2.3e-09 AA3_3.hmm 510 daaiedwvren.vettWhslgtckmapr.ekggvvdkkLnvyGvegLkvaDl 559 d+ ie+w++++ ++ +h +gt +m+ +k vvd+k v Gv+gL++aD 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 525 DKGIEHWLKSKgLDQGYHGMGTLRMGKAgDKMRVVDSKGRVVGVDGLRIADT 576 899*****97659************75527789******************* PP AA3_3.hmm 560 sivP 563 s++P 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 577 SVIP 580 ***9 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.9 0.0 1.4e-14 1.4e-14 11 124 .. 7 127 .. 2 153 .. 0.70 2 ! 41.5 0.0 1.8e-14 1.8e-14 217 341 .. 249 358 .. 245 394 .. 0.80 3 ! 34.5 0.0 2.4e-12 2.4e-12 402 524 .. 455 582 .. 441 584 .. 0.80 Alignments for each domain: == domain 1 score: 41.9 bits; conditional E-value: 1.4e-14 AA3_1.hmm 11 pvaketyDyivvGaGagGivvAdrLsea..gkkvLLlekGgpstyatggt.. 58 + +e+yD+ivvGaG++G +A++L+ + + +vLLle+G+ ++ + ++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 7 AAYSESYDFIVVGAGTAGGYLAHKLATSpySPSVLLLENGPNTLSNNTNNpa 58 567899*******************98733678*******666555444332 PP AA3_1.hmm 59 ekpewle.......ntnltrfDvpglcneiladssgvactdta........q 95 ++p+ l+ +n++r D +++++ + + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 59 DNPN-LKslipgnfAENVARPDTNYMYKTVPQ----------KhlddrvlvY 99 2222.222333333344444444444444433..........1333444667 PP AA3_1.hmm 96 magcvlGGgtavNaglfvkpqasdfddkf 124 g lGG + +N++ ++k + dfd+ + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 100 HRGRGLGGTSNLNYMAWIKGYKGDFDE-W 127 89***********************84.4 PP == domain 2 score: 41.5 bits; conditional E-value: 1.8e-14 AA3_1.hmm 217 sNfklilntkVkrvvrsggkvtGVevessgGqrevikvtkggrVilsAGals 268 N + +++tkV+++ +++ GV+ve gG +k ++++Vi+sAG + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 249 RNLEVRTDTKVEKILFDHKTAIGVQVE--GG----RKFFAKKEVIISAGFID 294 58999**********************..55....4555789********** PP AA3_1.hmm 269 spkiLlrSGigpkdqlevvkasasdgvtliaksdwinlpvGknlkdhpntdl 320 spk+Ll SGigpk+ l+ + ++++++ + +vGkn+ dh+ + l 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 295 SPKLLLLSGIGPKADLQELG------IKVVHD----SPNVGKNMLDHSTVLL 336 ****************8776......444554....3689999999998888 PP AA3_1.hmm 321 kiktke.isaydfyealtspit 341 + k+ ++ + +++p + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 337 DPIFKQdLQVPTGNLLFSEPAR 358 7544444666655555666655 PP == domain 3 score: 34.5 bits; conditional E-value: 2.4e-12 AA3_1.hmm 402 ltrgltSrGrleitakg..ntvvskkpylsdaeDkeavaqfienliaalsa. 450 l ++ +rG+++++++ ++ v + y+s++ D + ++ i++ ++ +++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 455 LHQNHLARGTISLNSSNpsDAPVIDPQYFSHPYDVRISIETIKKAVEIFKTk 506 556778999999999665588899999*****************99988873 PP AA3_1.hmm 451 ....asgltlvspasnttvedlvksllvsvakrsanHwmgtaklGtddsggt 498 + + + ++t++ + + l +s + ++ H mgt ++G+ + ++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 507 alsaHFNGGFYVNGIDMTDKGIEHWL-KSKGLDQGYHGMGTLRMGK-AGDKM 556 32112222233445566666666666.89999*************6.59999 PP AA3_1.hmm 499 svvDlntkVyGtdNLfVvDASifpdl 524 +vvD + +V+G+d L ++D S++p + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 557 RVVDSKGRVVGVDGLRIADTSVIPVV 582 ***********************965 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.4 0.0 0.037 0.037 3 38 .. 12 49 .. 10 101 .. 0.82 2 ! 9.7 0.0 0.00011 0.00011 227 315 .. 250 340 .. 226 372 .. 0.70 3 ! 9.5 0.0 0.00013 0.00013 468 507 .. 541 581 .. 529 583 .. 0.90 Alignments for each domain: == domain 1 score: 1.4 bits; conditional E-value: 0.037 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqd 38 ++d +++G+G G A++l+ + +vl++e G ++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 12 SYDFIVVGAGTAGGYLAHKLATspYSPSVLLLENGPNT 49 6899*****************95556779999999864 PP == domain 2 score: 9.7 bits; conditional E-value: 0.00011 AA3_4.hmm 227 kfeLltetrctkleldeskekkieaaevkdLlknkdllvkakvyviaaGavl 278 ++e++t+t+++k+ d++ + + +++ +++ k ++i+aG + 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 250 NLEVRTDTKVEKILFDHK--T-AIGV---QVEGGRKF-FAKKEVIISAGFID 294 667777777777766652..1.1222...23334444.4567899******* PP AA3_4.hmm 279 tpqiLanSgfgke.........keellpaLgkylteqsmafcqvvL 315 +p++L Sg+g + + p++gk++ ++s+++ + ++ 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 295 SPKLLLLSGIGPKadlqelgikVVHDSPNVGKNMLDHSTVLLDPIF 340 **********997777777766555667777777777666555555 PP == domain 3 score: 9.5 bits; conditional E-value: 0.00013 AA3_4.hmm 468 lhitGttragk.dketsvvdenskvwgfknLyvGGngvIpt 507 h Gt r+gk ++ vvd++++v g++ L ++ +vIp 541043|Morimp1_GeneCatalog_proteins_20150807.aa.fasta|AA3 541 YHGMGTLRMGKaGDKMRVVDSKGRVVGVDGLRIADTSVIPV 581 5789*******768999**********************95 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (585 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 73.28 // Query: 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 [L=671] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.4e-132 430.3 0.0 4e-132 430.1 0.0 1.0 1 AA3_2.hmm 9.8e-77 247.0 0.0 1.3e-76 246.6 0.0 1.0 1 AA3.hmm 1.2e-61 197.2 0.0 1.9e-61 196.5 0.0 1.3 1 AA3_3.hmm 1.2e-41 131.2 0.2 3.2e-16 47.3 0.0 3.3 3 AA3_1.hmm 2.7e-10 28.2 0.0 1.1e-05 13.0 0.0 3.0 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 430.1 0.0 4e-132 4e-132 2 567 .. 26 656 .. 25 657 .. 0.83 Alignments for each domain: == domain 1 score: 430.1 bits; conditional E-value: 4e-132 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsed.pnvsVlviEaGgdeendpli 44 s+D+++VG+GtAG +A+rL+ + + sVl++E G++ ++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 26 SFDFIVVGAGTAGGYLAHRLATSaFSPSVLLLETGPNTISNSSK 69 8********************952678********987765444 PP AA3_2.hmm 45 dvpglagsl............lgseldwnyttepqkglnnrsik 76 p+ +l +++ +++ytt+pqk l++r++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 70 AKPAENPNLfslipgnfaenvAQQRTNYMYTTTPQKDLDDRVLV 113 444444433222233322222555******************** PP AA3_2.hmm 77 lprGkvlGGssaiNamlytrgskadydaWaellgnegWswdnll 120 ++rGk+lGG+s +N+m+++ g k+d+d+Wa++ g++ ++ ++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 114 YHRGKGLGGTSMLNYMAWIKGYKGDFDEWAQQAGDTAYGSNEGW 157 **********************************7766666655 PP AA3_2.hmm 121 pyfkk......setftppdeeq.deanitydasvhgtsGplkvs 157 + +k+ e+f p+ + e + +a+ hg+ Gp++ s 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 158 ERIKRvglvlfLESFDPTGLPKcYERYAAPKAADHGSFGPIHNS 201 55555221111577777544447788899*************** PP AA3_2.hmm 158 fpeeasplskallealeelGvptnkdlnsgdalGvslvpstidp 201 p+++ p +++++ e+G+p+ d n+g+++G++lv+ +i + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 202 LPKNVLPGIGTFIDGCVEAGIPKALDTNTGNNIGAGLVQMAIYK 245 ******************************************** PP AA3_2.hmm 202 ttgtRssaatayldp.......vekrsnltvltnatvtkilfds 238 g R s+at+ l++ +++ +nl+v ++++v+kilfd+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 246 --GARVSSATQLLNDendigagLRRPKNLEVRVETRVEKILFDR 287 ..************8777776557789***************** PP AA3_2.hmm 239 tkkkatGVevtkkdgkkytvkarkEVILsaGainsPqlLmlSGi 282 + +a GV+v+ g+ ++ a+kE+I+saG i++P+lL+lSG+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 288 K--TAVGVQVEG--GR--KYFANKEIIISAGFIDTPKLLLLSGV 325 *..9******88..65..799*********************** PP AA3_2.hmm 283 GpkeeLeklgIpvvvdlpgVGenLqDhllvpvsfevkepl..et 324 GpkeeLe++gI+vv++ p+VG+nL Dh +v + +k++l +t 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 326 GPKEELEEHGIKVVHNSPNVGKNLLDHSTVLLDPIFKQDLqlPT 369 *****************************998766666554489 PP AA3_2.hmm 325 ldellsdptvaaealaeylan...kt....Gpltssv.sevlaf 360 + l+sdp++ + + +++l ++ G lt+ + s ++af 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 370 GNGLFSDPERVEFEKKKWLDGynnGKgegvGELTRFGgSAAVAF 413 999*******9999999997433422444478887665888899 PP AA3_2.hmm 361 vklpeilskeeksnlasla.aqeelladedvpdlelvlvplaln 403 +k++e ++++ + ++l+ ++++ +d+d pd e++++ ++l+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 414 IKFTEE-ERNQWPEWKALTdEERKRFLDKDRPDTEIFYLLGYLP 456 995555.222222334444655666669**********999999 PP AA3_2.hmm 404 taes...paeg..knylsilvvllkplSrGsvklasadpldkpl 442 ++ + ++y+ + ++ ++ lSrG+++l+s++p+d+pl 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 457 PGKTiptG--SqpNSYARLFLLHQNHLSRGTISLRSSNPADPPL 498 98887642..23469***************************** PP AA3_2.hmm 443 idpnylsdplDlevlvegvklarkiastkalkelvaeevapg.. 484 idp+y+s+p+D+++ ve +k a ki++tkal++ v g 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 499 IDPQYFSHPYDVRIGVETIKQAVKIFRTKALANTVVGMEFKGca 542 *******************************9987533332233 PP AA3_2.hmm 485 ............................aev.qsdeeleeyire 499 + +d+ +ee++r+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 543 edppyirdsaeieeknrlkaeanggfyiNGInMTDKGIEEWLRT 586 3344677777777777777776666665222249*********9 PP AA3_2.hmm 500 sl.stvyHpvGTcamgpre.kggVVDselrVyGvknLRVvDaSv 541 + + yH +GTc+mg+ k VVDs+ rV Gv++LR++D+Sv 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 587 KGlDQGYHGMGTCRMGKAGdKLRVVDSKGRVVGVEGLRIADTSV 630 8769*************99999********************** PP AA3_2.hmm 542 fPllvsahtqatvyavAekaAdlIke 567 +P++++ h+q +y vA +Ad I++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 631 VPVVMNNHPQVSAYLVADVVADGILR 656 **********************9986 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 246.6 0.0 1.3e-76 1.3e-76 81 405 .. 18 662 .. 11 669 .. 0.84 Alignments for each domain: == domain 1 score: 246.6 bits; conditional E-value: 1.3e-76 AA3.hmm 81 feitlskeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGe 120 ++++ e++D+++vG+G+aG+ lA+rL+ + +vlllE G+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 18 LTTAEVSESFDFIVVGAGTAGGYLAHRLATSafspSVLLLETGP 61 56677889**********************9************9 PP AA3.hmm 121 edlnee......kklied........evklds............ 138 + + + + + + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 62 NTISNSskakpaE----NpnlfslipG----Nfaenvaqqrtny 97 8644445443320....1222223331....1455556667788 PP AA3.hmm 139 ...tepq..lngrriilprgkvlGGsslinamvylrgqaedfda 177 t+pq l++r + + rgk+lGG+s+ n+m +++g + dfd+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 98 mytTTPQkdLDDRVLVYHRGKGLGGTSMLNYMAWIKGYKGDFDE 141 999888899999999999************************** PP AA3.hmm 178 waee.g.egwswddllpyfkkaeell.................. 201 wa++ g ++ ++ + k++ +l 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 142 WAQQaGdTAYGSNEGWERIKRVGLVLflesfdptglpkcyerya 185 ****8544466677777777777555888888888888888888 PP AA3.hmm 202 .......................r.................... 202 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 186 apkaadhgsfgpihnslpknvlpGigtfidgcveagipkaldtn 229 88777777777666666665555055555556666666667777 PP AA3.hmm 203 .................rrssaakayldplpa........pnle 221 +r s+a+ l+ + +nle 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 230 tgnnigaglvqmaiykgARVSSATQLLNDENDigaglrrpKNLE 273 777788888888899998899999999885555689999***** PP AA3.hmm 222 iltnarvtkilf..........ag..tlvaakeVilaaGaigsp 253 ++ ++rv+kilf +g +++a+ke+i++aG i +p 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 274 VRVETRVEKILFdrktavgvqvEGgrKYFANKEIIISAGFIDTP 317 *************988866554115456**************** PP AA3.hmm 254 qlLllSgigpaee.eslgipvvvdlp.vgenlq........... 284 +lLllSg+gp+ee e++gi+vv++ p vg+nl 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 318 KLLLLSGVGPKEElEEHGIKVVHNSPnVGKNLLdhstvlldpif 361 ******************************************** PP AA3.hmm 285 ............................................ 284 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 362 kqdlqlptgnglfsdpervefekkkwldgynngkgegvgeltrf 405 ******************************************** PP AA3.hmm 285 ............................................ 284 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 406 ggsaavafikfteeernqwpewkaltdeerkrfldkdrpdteif 449 ******************************************** PP AA3.hmm 285 .............................apks..svrlnssdp 297 + s ++ l+ss+p 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 450 yllgylppgktiptgsqpnsyarlfllhqNHLSrgTISLRSSNP 493 **************************976333378********* PP AA3.hmm 298 ldpplidpnylsderdvellvegvr................... 322 +dpplidp+y+s++ dv+ ve ++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 494 ADPPLIDPQYFSHPYDVRIGVETIKqavkifrtkalantvvgme 537 *************988877777777777799999999999***9 PP AA3.hmm 323 .................................eeetdd..... 328 + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 538 fkgcaedppyirdsaeieeknrlkaeanggfyiN----Ginmtd 577 *****99999988888777766666666666651....044444 PP AA3.hmm 329 ......tree.iqtiyHpvGtcrmged.dasaVVdpnlrvhgve 364 r + +yH +Gtcrmg+ d+ VVd+++rv gve 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 578 kgieewLRTKgLDQGYHGMGTCRMGKAgDKLRVVDSKGRVVGVE 621 5888998888899************999999************* PP AA3.hmm 365 nLrvvDasvfPtilggnpnltivaiaeraadlikkdngkql 405 +Lr++D sv+P +p+ +++ +a +ad i+ d+ + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 622 GLRIADTSVVPVVMNNHPQVSAYLVADVVADGILRDHAISG 662 *********************************99987655 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 196.5 0.0 1.9e-61 1.9e-61 3 587 .. 27 656 .. 25 658 .. 0.80 Alignments for each domain: == domain 1 score: 196.5 bits; conditional E-value: 1.9e-61 AA3_3.hmm 3 vDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddplvv 46 D i++G+Gtag+ a Rla+++ + +vll+e+G+n+ + + + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 27 FDFIVVGAGTAGGYLAHRLATSAFSPSVLLLETGPNTISNSSKA 70 79**********************************99988887 PP AA3_3.hmm 47 kPalflsnlkp..........esktalfykaekseeldgReliv 80 kPa ++ ++ +++t +y+++++++ld+R l+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 71 KPAENPNLFSLipgnfaenvaQQRTNYMYTTTPQKDLDDRVLVY 114 776544432222233333444778889999************** PP AA3_3.hmm 81 paggvlGGGssinflmYtraqasDfdsw..........kteGWs 114 g+ lGG s +n++ + ++ + Dfd+w ++eGW+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 115 HRGKGLGGTSMLNYMAWIKGYKGDFDEWaqqagdtaygSNEGWE 158 ****************************9999988888889999 PP AA3_3.hmm 115 akdllpllkkletyqgkg...........deevhGkeGPikvsk 147 + + l+ le++ +g +++ hG+ GPi+ s 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 159 RIKRVGLVLFLESFDPTGlpkcyeryaapKAADHGSFGPIHNSL 202 877666666666665554444455555667889*********** PP AA3_3.hmm 148 GtytskrveddfleaaeelgipevdDlqdletsngveralryvs 191 + + f+++ e+gip+ D + ++ g+ + + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 203 PKNVLP-GIGTFIDGCVEAGIPKALDTNTGNNI-GAGLV-QMAI 243 *99999.6789**************99887665.33333.3334 PP AA3_3.hmm 192 rdGrRqDaAhaylhpklksgk....kpnLhvlveskvsrvlfen 231 +G R +A++ l ++ + g+ +nL+v ve++v+++lf+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 244 YKGARVSSATQLLNDENDIGAglrrPKNLEVRVETRVEKILFDR 287 58***********99877664222268***************** PP AA3_3.hmm 232 kravgvelvpnkafqkeaksksrtvkarklvvvsaGalgtPlvL 275 k avgv+++ +++ a k +++saG + tP++L 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 288 KTAVGVQVEGGRKYF-----------ANKEIIISAGFIDTPKLL 320 ******998766554...........5689************** PP AA3_3.hmm 276 eRsGiGakevLekagvkvvvdlpgvGenyqDHklllv..pyraa 317 sG+G ke Le+ g+kvv + p vG+n+ DH ++l ++++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 321 LLSGVGPKEELEEHGIKVVHNSPNVGKNLLDHSTVLLdpIFKQD 364 ********************************998863358888 PP AA3_3.hmm 318 lepsetldallrgrkdveealk...........ekkgilgtngi 350 l+ t + l + + ve + k e+ g l+ g 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 365 LQ-LPTGNGLFSDPERVEFEKKkwldgynngkgEGVGELTRFGG 407 64.45666666665555444444566999998877888888777 PP AA3_3.hmm 351 dvgvk.lRPteeevealgpeFkeawdrdfkn..kpdkplmllav 391 ++v ++ teee ++ pe+k+ d++ k+ d+p + + + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 408 SAAVAfIKFTEEERNQ-WPEWKALTDEERKRflDKDRPDTEIFY 450 7766615566666555.699999999876653346788888888 PP AA3_3.hmm 392 vagflgdpslv....pekkyltlsaftayPysrGsihitspdpe 431 + g+l +++ +++ y l+ + srG+i s++p+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 451 LLGYLPPGKTIptgsQPNSYARLFLLHQNHLSRGTISLRSSNPA 494 8888776666655668899999********************** PP AA3_3.hmm 432 eeidFetgflkdkaDlkklvwaYkkqReiaRRmdvyrg....el 471 +++ + +++++ D++ v + k+ i+R + + e+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 495 DPPLIDPQYFSHPYDVRIGVETIKQAVKIFRTKALANTvvgmEF 538 ************************99999997654433111255 PP AA3_3.hmm 472 a..aahPkfakgskaalveldaekkeskkkvedieYtaeDdaai 513 + a P++ ++s+ ++e++ k++ + i+ + d+ i 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 539 KgcAEDPPYIRDSA-EIEEKNRL-KAEANGGFYINGINMTDKGI 580 42256899999985.55555333.44444455688888889*** PP AA3_3.hmm 514 edwvren.vettWhslgtckmapr.ekggvvdkkLnvyGvegLk 555 e+w+r++ ++ +h +gtc+m+ +k vvd+k v GvegL+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 581 EEWLRTKgLDQGYHGMGTCRMGKAgDKLRVVDSKGRVVGVEGLR 624 *****7659************76516789*************** PP AA3_3.hmm 556 vaDlsivPenvgantnstallvGekaadiilk 587 +aD s+vP + + +a+lv + ad il+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 625 IADTSVVPVVMNNHPQVSAYLVADVVADGILR 656 ********999999999999999988887665 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 47.3 0.0 3.2e-16 3.2e-16 10 124 .. 20 142 .. 12 161 .. 0.78 2 ! 41.5 0.0 1.8e-14 1.8e-14 216 332 .. 269 370 .. 237 430 .. 0.81 3 ! 38.8 0.0 1.2e-13 1.2e-13 462 545 .. 574 655 .. 474 658 .. 0.87 Alignments for each domain: == domain 1 score: 47.3 bits; conditional E-value: 3.2e-16 AA3_1.hmm 10 tpvaketyDyivvGaGagGivvAdrLsea..gkkvLLlekGgps 51 t +e++D+ivvGaG++G +A+rL+ + + +vLLle G p+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 20 TAEVSESFDFIVVGAGTAGGYLAHRLATSafSPSVLLLETG-PN 62 5556789*******************97622578*******.88 PP AA3_1.hmm 52 tyatggtekpewlentnltrfDvpg.lcneiladssg..vactd 92 t++ +++kp n nl +pg +++++++ ++ +++t 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 63 TISNSSKAKPAE--NPNLFSL-IPGnFAENVAQQRTNymYTTTP 103 888888888865..9999776.9994455555554442133333 PP AA3_1.hmm 93 ta........qmagcvlGGgtavNaglfvkpqasdfddkf 124 ++ g+ lGG +++N++ ++k + dfd+ + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 104 QKdlddrvlvYHRGKGLGGTSMLNYMAWIKGYKGDFDE-W 142 3367788887789***********************84.4 PP == domain 2 score: 41.5 bits; conditional E-value: 1.8e-14 AA3_1.hmm 216 rsNfklilntkVkrvvrsggkvtGVevessgGqrevikvtkggr 259 +N + + +t+V+++ ++++GV+ve gG++ ++++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 269 PKNLEVRVETRVEKILFDRKTAVGVQVE--GGRKY----FANKE 306 47999***********************..66444....4679* PP AA3_1.hmm 260 VilsAGalsspkiLlrSGigpkdqlevvkasasdgvtliaksdw 303 +i+sAG + +pk+Ll SG+gpk++le ++g++++++s 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 307 IIISAGFIDTPKLLLLSGVGPKEELE------EHGIKVVHNS-- 342 *************************5......4677777775.. PP AA3_1.hmm 304 inlpvGknlkdhpntdlkiktke.isaydf 332 +vGknl dh+ + l+ k+ ++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 343 --PNVGKNLLDHSTVLLDPIFKQdLQLPTG 370 ..68********999887444443555555 PP == domain 3 score: 38.8 bits; conditional E-value: 1.2e-13 AA3_1.hmm 462 nttvedlvksllvsvakrsanHwmgtaklGtddsggtsvvDlnt 505 n+t++ + + l + + ++ H mgt+++G+ + ++ +vvD + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 574 NMTDKGIEEWL-RTKGLDQGYHGMGTCRMGK-AGDKLRVVDSKG 615 56666666666.788999************6.59999******* PP AA3_1.hmm 506 kVyGtdNLfVvDASifpdlptgNpsaiimvaaekaaekil 545 +V+G++ L ++D S++p ++ p++ +a+ a il 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 616 RVVGVEGLRIADTSVVPVVMNNHPQVSAYLVADVVADGIL 655 *********************************9999998 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.6 0.0 0.031 0.031 3 39 .. 26 64 .. 24 111 .. 0.78 2 ! 13.0 0.0 1.1e-05 1.1e-05 224 318 .. 268 364 .. 245 392 .. 0.74 3 ! 9.7 0.0 0.00011 0.00011 468 521 .. 593 647 .. 579 657 .. 0.85 Alignments for each domain: == domain 1 score: 1.6 bits; conditional E-value: 0.031 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqds 39 ++d +++G+G G A+ l+ + +vl++e G ++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 26 SFDFIVVGAGTAGGYLAHRLATsaFSPSVLLLETGPNTI 64 7899*****************9443667******98754 PP == domain 2 score: 13.0 bits; conditional E-value: 1.1e-05 AA3_4.hmm 224 kkekfeLltetrctkleldeskekkieaaevkdLlknkdllvka 267 + +++e++ etr++k+ d++ + ++v+ ++ + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 268 RPKNLEVRVETRVEKILFDRK---TAVGVQVE---GGRK-YFAN 304 445888999999999988773...23344433...3444.4677 PP AA3_4.hmm 268 kvyviaaGavltpqiLanSgfgke.........keellpaLgky 302 k ++i+aG + tp++L Sg+g + ++ p++gk+ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 305 KEIIISAGFIDTPKLLLLSGVGPKeeleehgikVVHNSPNVGKN 348 999******************99999999999866789999*** PP AA3_4.hmm 303 lteqsmafcqvvLkke 318 l ++s+++ + ++k++ 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 349 LLDHSTVLLDPIFKQD 364 *999988777666666 PP == domain 3 score: 9.7 bits; conditional E-value: 0.00011 AA3_4.hmm 468 lhitGttragk.dketsvvdenskvwgfknLyvGGngvIptafa 510 h Gt r+gk ++ vvd++++v g++ L ++ +v+p + 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 593 YHGMGTCRMGKaGDKLRVVDSKGRVVGVEGLRIADTSVVPVVMN 636 5889*******658899***********************9999 PP AA3_4.hmm 511 aNPtlTsvafA 521 P + + +A 918039|Gyrinf1_GeneCatalog_proteins_20200207.aa.fasta|AA3_2|AA3_2 637 NHPQVSAYLVA 647 98888777666 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (671 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 105.11 // Query: 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 [L=661] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7e-140 455.7 0.0 8e-140 455.5 0.0 1.0 1 AA3_2.hmm 9.8e-79 253.6 0.0 1.2e-78 253.3 0.0 1.0 1 AA3.hmm 1.2e-64 207.0 0.0 2.4e-64 206.1 0.0 1.6 1 AA3_3.hmm 4.1e-44 139.4 0.3 6e-17 49.7 0.0 3.4 3 AA3_1.hmm 4.9e-10 27.4 0.0 2.9e-05 11.6 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 455.5 0.0 8e-140 8e-140 2 567 .. 27 650 .. 26 651 .. 0.85 Alignments for each domain: == domain 1 score: 455.5 bits; conditional E-value: 8e-140 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLse.dpnvsVlviEaGgdeend...pl 43 +yDY+i+G+Gt+G +A+rLs d+++sVl++E G++ ++ ++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 27 NYDYIIIGAGTTGGYLAHRLSTaDSKISVLLLETGPNTLSSsgpNE 72 8********************9789***********9877334588 PP AA3_2.hmm 44 idvpglagsl........lgseldwnyttepqkglnnrsiklprGk 81 i++p+l++ + +s+ ++ y+ +pq++l+nr+++++rGk 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 73 IKNPNLFSLVpgnfvenvAQSRTNYLYSIAPQAALENRVLTYHRGK 118 998887775533333333566************************* PP AA3_2.hmm 82 vlGGssaiNamlytrgskadydaWaellgnegWswdnllpyfkkse 127 +lGG+saiN+m+++ g k+dyd+Wa+ +++ +s + + +k+ e 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 119 GLGGTSAINFMAWVKGYKGDYDEWAQIANDSAFSGAEGWERIKRLE 164 ********************************************** PP AA3_2.hmm 128 tftppdeeq.deanitydasvhgtsGplkvsfpeeasplskallea 172 +f p + + + d s hg+sGp++ + p++ p + ++++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 165 NFDPSGLPAsYSRYAAPDLSNHGNSGPIHNGLPKNPIPGLTTFING 210 ****6544436778889***************************** PP AA3_2.hmm 173 leelGvptnkdlnsgdalGvslvpstidpttgtRssaatayldp.. 216 + e+Gvp++ d+nsg+++Gv++++ +i + g R+s+at+ l++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 211 CVEAGVPKSLDINSGKNIGVGIAQMAIYK--GARASSATQCLNSkg 254 *****************************..************888 PP AA3_2.hmm 217 .....vekrsnltvltnatvtkilfdstkkkatGVevtkkdgkkyt 257 ++k +nl++ +n+ v+k++fd+ ka GV+v g+ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 255 dlgagLRKPPNLDIKVNTKVEKVIFDGL--KAVGVQVVG--GR--I 294 888767899*******************..9******99..66..7 PP AA3_2.hmm 258 vkarkEVILsaGainsPqlLmlSGiGpkeeLeklgIpvvvdlpgVG 303 ++a++EVI+saG+i+sP+lL+lSG+Gpk +Le+l+I+v++d p+VG 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 295 YRAKREVIVSAGVIDSPKLLLLSGVGPKRDLEALNITVISDSPNVG 340 89******************************************** PP AA3_2.hmm 304 enLqDhllvpvsfevkepl..etldellsdptvaaealaeylan.. 345 +n+ Dh+++ + +k+++ +t ++++++p + ++ ++++ + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 341 KNMLDHTTILLDPIFKQDFrvPTGNSFWRNPDHVLWEKEKWIDTyn 386 **********887777765559999*****************9944 PP AA3_2.hmm 346 .....ktGpltssv.sevlafvklpeilskeeksnlasla...... 379 ++G +t + s+++af+k +++ee + +++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 387 sslgeGKGEMTLFGgSSAIAFIK----FTPEERE---QWPewkalk 425 44444445555333355555555....4555553...333333554 PP AA3_2.hmm 380 aqeella.dedvpdlelvlvplalntaes...paeg..knylsilv 419 ++e++ + d+d pd e++++ ++l+ ++ + ++y+ + + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 426 EEERARFlDPDRPDTEIFYFLGYLPPGKTipaG--SepNSYARLFL 469 333333369**********99999988887542..23479****** PP AA3_2.hmm 420 vllkplSrGsvklasadpldkplidpnylsdplDlevlvegvklar 465 + ++ lSrG+++l+++dp+++pli+p+y+s+p+D++++ve vk a 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 470 LQQNNLSRGTISLKTSDPAEEPLINPQYFSHPYDVRIAVETVKAAV 515 ********************************************** PP AA3_2.hmm 466 kiastkalkelv.......aeevapg.................... 484 ki++tk+l++l a+e + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 516 KIFKTKSLSALFigmefvgATEDP-Pfirdnpeqeeknlekaklsg 560 **********85233333222222.247777777777776666666 PP AA3_2.hmm 485 ....aevq...sdeeleeyiresl.stvyHpvGTcamgpre.kggV 521 +d+++e+++r++ + yH +GTc+mg + + V 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 561 gfyiN--GielTDADIEKWLRKKGlGQGYHGMGTCRMGAASdPLRV 604 65542..04459*********98779************99999*** PP AA3_2.hmm 522 VDselrVyGvknLRVvDaSvfPllvsahtqatvyavAekaAdlIke 567 VDs rV Gvk+LRV+D+Sv+P++++ h+q +y vA +Ad I++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 605 VDSGGRVVGVKGLRVADTSVIPVVMNNHPQVSAYLVADVVADSIIN 650 ********************************************87 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 253.3 0.0 1.2e-78 1.2e-78 84 404 .. 22 655 .. 16 660 .. 0.86 Alignments for each domain: == domain 1 score: 253.3 bits; conditional E-value: 1.2e-78 AA3.hmm 84 tlskeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlne 125 +++ ++yD++i+G+G+ G+ lA+rLs a +vlllE G++ l 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 22 PDRRTNYDYIIIGAGTTGGYLAHRLSTAdskiSVLLLETGPNTLSS 67 67889*************************9999*******98776 PP AA3.hmm 126 e.....kklied........evklds...............tepq. 142 k + + + pq 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 68 SgpneiK----NpnlfslvpG----NfvenvaqsrtnylysIAPQa 105 6744430....3322222330....134445556666777755557 PP AA3.hmm 143 .lngrriilprgkvlGGsslinamvylrgqaedfdawaee.g.egw 185 l++r +++ rgk+lGG+s+in+m +++g + d+d+wa+ + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 106 aLENRVLTYHRGKGLGGTSAINFMAWVKGYKGDYDEWAQIaNdSAF 151 8***************************************743446 PP AA3.hmm 186 swddllpyfkkaeell.............................. 201 s ++ + k++e++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 152 SGAEGWERIKRLENFDpsglpasysryaapdlsnhgnsgpihnglp 197 667778999****999999999999888888887777777766666 PP AA3.hmm 202 .......r...................................rrs 205 + +r 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 198 knpipglTtfingcveagvpksldinsgknigvgiaqmaiykgARA 243 6655555055555666666666777777778888888888889777 PP AA3.hmm 206 saakayldplpa........pnleiltnarvtkilf.......... 233 s+a+ l++ + pnl+i n++v+k++f 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 244 SSATQCLNSKGDlgaglrkpPNLDIKVNTKVEKVIFdglkavgvqv 289 7777777763333578899*****************9988866555 PP AA3.hmm 234 .agtl.vaakeVilaaGaigspqlLllSgigpaee.eslgipvvvd 276 g++ +a++eVi++aG+i sp+lLllSg+gp+ + e+l+i+v+ d 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 290 vGGRIyRAKREVIVSAGVIDSPKLLLLSGVGPKRDlEALNITVISD 335 433677**************************************** PP AA3.hmm 277 lp.vgenlq..................................... 284 p vg+n+ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 336 SPnVGKNMLdhttilldpifkqdfrvptgnsfwrnpdhvlwekekw 381 ********************************************** PP AA3.hmm 285 .............................................. 284 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 382 idtynsslgegkgemtlfggssaiafikftpeereqwpewkalkee 427 ********************************************** PP AA3.hmm 285 .............................................a 285 + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 428 erarfldpdrpdteifyflgylppgktipagsepnsyarlfllqqN 473 ******************************************9553 PP AA3.hmm 286 pks....svrlnssdpldpplidpnylsderdvellvegvr..... 322 + ++ l++sdp++ pli+p+y+s++ dv+ +ve v+ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 474 --NlsrgTISLKTSDPAEEPLINPQYFSHPYDVRIAVETVKaavki 517 ..45588**********************9999999999999999* PP AA3.hmm 323 .............................................. 322 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 518 fktkslsalfigmefvgatedppfirdnpeqeeknlekaklsggfy 563 ********************99999988877766666666666665 PP AA3.hmm 323 .eeetdd...........tree.iqtiyHpvGtcrmged.dasaVV 354 + r++ + +yH +Gtcrmg d+ VV 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 564 iN----GieltdadiekwLRKKgLGQGYHGMGTCRMGAAsDPLRVV 605 41....04444457899988889**************999999*** PP AA3.hmm 355 dpnlrvhgvenLrvvDasvfPtilggnpnltivaiaeraadlikkd 400 d+ +rv gv++Lrv+D sv+P +p+ +++ +a +ad i++d 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 606 DSGGRVVGVKGLRVADTSVIPVVMNNHPQVSAYLVADVVADSIIND 651 ********************************************99 PP AA3.hmm 401 ngkq 404 + + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 652 SRSE 655 8765 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 206.1 0.0 2.4e-64 2.4e-64 2 588 .. 27 651 .. 26 652 .. 0.80 Alignments for each domain: == domain 1 score: 206.1 bits; conditional E-value: 2.4e-64 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnldd...pl 44 ++D ii+G+Gt+g+ a Rl++ad +++vll+e+G+n+l + ++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 27 NYDYIIIGAGTTGGYLAHRLSTADSKISVLLLETGPNTLSSsgpNE 72 79*********************************99765422257 PP AA3_3.hmm 45 vvkPalf.......lsnlkpesktalfykaekseeldgRelivpag 83 + +P lf ++n ++s+t +y+ ++++ l++R l g 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 73 IKNPNLFslvpgnfVEN-VAQSRTNYLYSIAPQAALENRVLTYHRG 117 88887763221110333.357899999999**************** PP AA3_3.hmm 84 gvlGGGssinflmYtraqasDfdsw....kteGWsakdllpllkkl 125 + lGG s+inf+ + ++ + D+d+w + +s+ + + +k+l 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 118 KGLGGTSAINFMAWVKGYKGDYDEWaqiaNDSAFSGAEGWERIKRL 163 *************************887766788999999999999 PP AA3_3.hmm 126 etyqgkg...........deevhGkeGPikvskGtytskrveddfl 160 e++ +g d + hG++GPi+ + + + f+ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 164 ENFDPSGlpasysryaapDLSNHGNSGPIHNGLPKNPIP-GLTTFI 208 9998777766666666777899*******9877777777.6789** PP AA3_3.hmm 161 eaaeelgipevdDlqdletsngveralryvsrdGrRqDaAhaylhp 206 ++ e+g+p++ D++ ++ gv a+ + +G R +A++ l + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 209 NGCVEAGVPKSLDINSGKNI-GVGIAQMAI-YKGARASSATQCLNS 252 **************998887.666555444.48************9 PP AA3_3.hmm 207 klksg....kkpnLhvlveskvsrvlfenkravgvelvpnkafqke 248 k + g k pnL + v++kv++v+f++ +avgv++v 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 253 KGDLGaglrKPPNLDIKVNTKVEKVIFDGLKAVGVQVVG------- 291 977652233579***********************9975....... PP AA3_3.hmm 249 aksksrtvkarklvvvsaGalgtPlvLeRsGiGakevLekagvkvv 294 r+++a++ v+vsaG + +P++L sG+G k+ Le ++++v+ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 292 ----GRIYRAKREVIVSAGVIDSPKLLLLSGVGPKRDLEALNITVI 333 ....46899************************************* PP AA3_3.hmm 295 vdlpgvGenyqDHklllv..pyraalepsetldallrgrkdveeal 338 +d p vG+n DH+++l ++++ t +++ r+ ++v + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 334 SDSPNVGKNMLDHTTILLdpIFKQD-FRVPTGNSFWRNPDHVLWEK 378 **************98863357777.46778888888876654433 PP AA3_3.hmm 339 k...........ekkgilgt...ngidvgvklRPteeevealgpeF 370 + e+kg ++ + + +k+ P e e ++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 379 EkwidtynsslgEGKGEMTLfggSSAIAFIKFTPEEREQWPEWKAL 424 3355577788885555554410044445567777777665555555 PP AA3_3.hmm 371 keawdrdfknkpdkplmllavvagflgdpslv....pekkyltlsa 412 ke+ f pd+p + + ++ g+l +++ +++ y l+ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 425 KEEERARFL-DPDRPDTEIFYFLGYLPPGKTIpagsEPNSYARLFL 469 555445554.699**9999999999887777766778999****** PP AA3_3.hmm 413 ftayPysrGsihitspdpeeeidFetgflkdkaDlkklvwaYkkqR 458 + srG+i + +dp+ee+ + +++++ D++ v + k 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 470 LQQNNLSRGTISLKTSDPAEEPLINPQYFSHPYDVRIAVETVKAAV 515 ********************************************99 PP AA3_3.hmm 459 eiaRRmd...vyrg.el..aaahPkfakgskaalveldaekkeskk 498 i++ ++ g e+ a+ P+f ++ + + ++ ek++ + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 516 KIFKTKSlsaLFIGmEFvgATEDPPFIRDNPEQEEKN-LEKAKLSG 560 99987541225776455334678***99988766555.45544444 PP AA3_3.hmm 499 kvedieYtaeDdaaiedwvren.vettWhslgtckmaprek.ggvv 542 i+ + da ie+w+r++ + +h +gtc+m++ + vv 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 561 G-FYINGIELTDADIEKWLRKKgLGQGYHGMGTCRMGAASDpLRVV 605 3.3455555557779****9865999**********98766489** PP AA3_3.hmm 543 dkkLnvyGvegLkvaDlsivPenvgantnstallvGekaadiilke 588 d+ v Gv+gL+vaD s++P + + +a+lv + ad i+++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 606 DSGGRVVGVKGLRVADTSVIPVVMNNHPQVSAYLVADVVADSIIND 651 *********************9999999999****99999888765 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 49.7 0.0 6e-17 6e-17 9 124 .. 20 142 .. 13 168 .. 0.71 2 ! 46.6 0.0 5.2e-16 5.2e-16 189 341 .. 229 373 .. 216 429 .. 0.77 3 ! 39.2 0.1 9e-14 9e-14 464 546 .. 570 650 .. 468 652 .. 0.88 Alignments for each domain: == domain 1 score: 49.7 bits; conditional E-value: 6e-17 AA3_1.hmm 9 atpvaketyDyivvGaGagGivvAdrLs..eagkkvLLlekGgpst 52 p ++++yDyi++GaG+ G +A+rLs +++ +vLLle G+ ++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 20 VIPDRRTNYDYIIIGAGTTGGYLAHRLStaDSKISVLLLETGPNTL 65 55667889*******************95556789*******6665 PP AA3_1.hmm 53 yatggtekpewlentnltrfDvpg.lcneiladssgvactdta... 94 ++g + ++n nl vpg +++++++ ++ + +a 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 66 SSSGPN----EIKNPNLFSL-VPGnFVENVAQSRTN-YLYSIApqa 105 555554....3455666554.777333444443222.221111122 PP AA3_1.hmm 95 ........qmagcvlGGgtavNaglfvkpqasdfddkf 124 g+ lGG +a+N + +vk + d+d ++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 106 alenrvltYHRGKGLGGTSAINFMAWVKGYKGDYD-EW 142 46666677789***********************8.45 PP == domain 2 score: 46.6 bits; conditional E-value: 5.2e-16 AA3_1.hmm 189 vyghppfmisngerggPlatYLps.....A..kkrsNfklilntkV 227 g ++++i +g r++++++ L+s A +k +N +++ ntkV 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 229 GVGIAQMAIYKGARASSATQCLNSkgdlgAglRKPPNLDIKVNTKV 274 556677888888888888888876333322225678********** PP AA3_1.hmm 228 krvvrsggkvtGVevessgGqrevikvt.kggrVilsAGalsspki 272 ++v+ g k++GV+v gG ++ ++ +Vi+sAG++ spk+ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 275 EKVIFDGLKAVGVQVV--GG-----RIYrAKREVIVSAGVIDSPKL 313 ***************9..55.....23326789************* PP AA3_1.hmm 273 LlrSGigpkdqlevvkasasdgvtliaksdwinlpvGknlkdhpnt 318 Ll SG+gpk le ++ +t+i++s +vGkn+ dh+ + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 314 LLLSGVGPKRDLEALN------ITVISDS----PNVGKNMLDHTTI 349 ************9999......6666664....69*********99 PP AA3_1.hmm 319 dlkiktke.isaydfyealtspit 341 l+ k+ + ++ + +p++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 350 LLDPIFKQdFRVPTGNSFWRNPDH 373 998555555888888888888876 PP == domain 3 score: 39.2 bits; conditional E-value: 9e-14 AA3_1.hmm 464 tvedlvksllvsvakrsanHwmgtaklGtddsggtsvvDlntkVyG 509 t++d+ k l + + ++ H mgt+++G +s+ +vvD +V+G 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 570 TDADIEKWL-RKKGLGQGYHGMGTCRMGA-ASDPLRVVDSGGRVVG 613 666777776.688999************6.5*************** PP AA3_1.hmm 510 tdNLfVvDASifpdlptgNpsaiimvaaekaaekila 546 ++ L V+D S++p ++ p++ +a+ a i++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 614 VKGLRVADTSVIPVVMNNHPQVSAYLVADVVADSIIN 650 ********************************99986 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 5.1 0.0 0.0026 0.0026 3 44 .. 27 70 .. 25 110 .. 0.78 2 ! 7.0 0.0 0.00072 0.00072 248 318 .. 273 358 .. 244 387 .. 0.71 3 ! 11.6 0.0 2.9e-05 2.9e-05 465 530 .. 584 650 .. 572 652 .. 0.89 Alignments for each domain: == domain 1 score: 5.1 bits; conditional E-value: 0.0026 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqdskvige 44 ++d +i+G+G G A+ l ++++vl++e G ++ + g 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 27 NYDYIIIGAGTTGGYLAHRLSTadSKISVLLLETGPNTLSSSGP 70 6899****************884467889******987665554 PP == domain 2 score: 7.0 bits; conditional E-value: 0.00072 AA3_4.hmm 248 kieaaevkdLlk......nkdllvkakvyviaaGavltpqiLanSg 287 k+e+++ L++ +++ + ++++aG + +p++L Sg 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 273 KVEKVIFDGLKAvgvqvvGGRIYRAKREVIVSAGVIDSPKLLLLSG 318 4455555555443322222234445567899*************** PP AA3_4.hmm 288 fgke.........keellpaLgkylteqsmafcqvvLkke 318 +g + + p++gk++ ++++ + + ++k++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 319 VGPKrdlealnitVISDSPNVGKNMLDHTTILLDPIFKQD 358 *998888888777556678889999888877666666555 PP == domain 3 score: 11.6 bits; conditional E-value: 2.9e-05 AA3_4.hmm 465 glalhitGttragk.dketsvvdenskvwgfknLyvGGngvIptaf 509 g h Gt r+g ++ vvd+ ++v g+k L v+ +vIp + 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 584 GQGYHGMGTCRMGAaSDPLRVVDSGGRVVGVKGLRVADTSVIPVVM 629 5667999*******777889************************** PP AA3_4.hmm 510 aaNPtlTsvafAikgaekive 530 P + + +A a++i++ 177|Tubme1v2_GeneCatalog_proteins_20160215.aa.fasta|AA3_2|AA3_2 630 NNHPQVSAYLVADVVADSIIN 650 ****99999999888888876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (661 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 77.23 // Query: 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 [L=662] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.8e-138 448.8 0.0 1e-137 448.6 0.0 1.0 1 AA3_2.hmm 8.1e-80 257.2 0.0 9.9e-80 256.9 0.0 1.0 1 AA3.hmm 4.3e-61 195.3 0.0 9.6e-61 194.1 0.0 1.6 1 AA3_3.hmm 7.5e-46 145.1 0.1 2.3e-19 57.7 0.0 3.5 3 AA3_1.hmm 1.2e-08 22.8 0.0 0.00027 8.4 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 448.6 0.0 1e-137 1e-137 2 568 .] 27 651 .. 26 651 .. 0.86 Alignments for each domain: == domain 1 score: 448.6 bits; conditional E-value: 1e-137 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLse.dpnvsVlviEaGgdeen... 40 +yDY+i+G+GtAG +A+rLs +++ sVl++EaG++ + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTaNSTKSVLLLEAGPNTLSssg 69 7********************977899*********9876444 PP AA3_2.hmm 41 dplidvpglagsl........lgseldwnyttepqkglnnrsi 75 +++i++p+l++ + +s+ ++ y+ +pq++l+nr++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 70 SNEIENPNLFSLVpgnfvenvAQSRTNYLYKIAPQTALENRVL 112 589999987775533333333555******************* PP AA3_2.hmm 76 klprGkvlGGssaiNamlytrgskadydaWaellgnegWswdn 118 +++rGk+lGGssaiN+m+++ g k+dyd+Wa+ +++ +s + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 113 TYHRGKGLGGSSAINYMAWVKGYKGDYDEWAQIANDSAFSGTE 155 ******************************************* PP AA3_2.hmm 119 llpyfkksetftppdeeq.deanitydasvhgtsGplkvsfpe 160 + +k+ e+f p+ + + d + hg+sGp++ s p+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 156 GWERIKRLEDFDPTGLPIsYSPYAAPDLANHGNSGPIHNSLPK 198 *************8655556677889***************** PP AA3_2.hmm 161 easplskallealeelGvptnkdlnsgdalGvslvpstidptt 203 + p + +++++ e+G+p++ dlnsg+ +G+++++ +i + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 199 NPIPGLTTFIDGCIEAGIPKSLDLNSGKIIGAGIAQMAIYK-- 239 *****************************************.. PP AA3_2.hmm 204 gtRssaatayldp.......vekrsnltvltnatvtkilfdst 239 g R s+at+ l++ ++k++nl++ ++++v+ki+fd+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 240 GARVSSATQCLNSrgdlgagLRKQPNLDIKVDTRVEKIIFDGL 282 ************88888877799******************** PP AA3_2.hmm 240 kkkatGVevtkkdgkkytvkarkEVILsaGainsPqlLmlSGi 282 ka GV+v+ g+ ++a+ EVI+saG i+sP+lL+lSGi 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 283 --KAVGVQVAG--GR--IYRAKGEVIISAGFIDSPKLLLLSGI 319 ..9******98..66..788999******************** PP AA3_2.hmm 283 GpkeeLeklgIpvvvdlpgVGenLqDhllvpvsfevkepl..e 323 Gpk++Le+l+Ipvv+d p+VG+nL Dh+++ + +k++l + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 320 GPKKDLEALNIPVVSDSPNVGKNLLDHPTILLDPIFKQDLrvP 362 *******************************887777665559 PP AA3_2.hmm 324 tldellsdptvaaealaeylanktGpltssvsevlafvklpei 366 t ++++++p + ++ ++++ + ++ + +e++ f + i 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 363 TGNSFWKNPDHVLWEKKKWIDTYNSSAGEGEGEMTLFGGSAGI 405 999*****************99665555555555555555554 PP AA3_2.hmm 367 ....lskeeksnlasla......aqeella.dedvpdlelvlv 398 +s+ee + +++ a+e++ + d++ pd e++++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 406 sflkFSPEERE---QWPewkaltAEERARFlDPERPDTEIFYF 445 44345666663...333333554444444469**********9 PP AA3_2.hmm 399 plalntaes...paeg..knylsilvvllkplSrGsvklasad 436 ++l+ +s + ++y+ + ++ ++ lSrG ++l++++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 446 LGYLPPGKSipaG--SepNSYARLFLLQQNSLSRGYISLSTSN 486 9999999987652..23479*********************** PP AA3_2.hmm 437 pldkplidpnylsdplDlevlvegvklarkiastkalkelvae 479 p+++pli+p+yls+p+D++++ve vk a ki++tk+l+++ + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 487 PAEQPLINPQYLSHPYDVRLAVETVKAAVKIFKTKSLSAVFTG 529 ***************************************8643 PP AA3_2.hmm 480 evapg..............................aevq...s 489 g + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 530 MEFVGvnedppfirdspeqeeknrekgklsggfyiN--GielT 570 333222222335666666766666676776666542..03349 PP AA3_2.hmm 490 deeleeyiresl.stvyHpvGTcamgpre.kggVVDselrVyG 530 d+ +e+++re+ + yH +GTc+mg + VVDs rV G 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 571 DAGIEKWLREKGlGQGYHGMGTCRMGAAGdPLRVVDSGGRVVG 613 **********8779************99999************ PP AA3_2.hmm 531 vknLRVvDaSvfPllvsahtqatvyavAekaAdlIked 568 v++LRV+D+Sv+P++++ h+q ++y vA +Ad I++d 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 614 VTGLRVADTSVIPVVMNNHPQVPAYLVADVVADSILKD 651 ***********************************975 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 256.9 0.0 9.9e-80 9.9e-80 85 408 .. 23 659 .. 14 661 .. 0.86 Alignments for each domain: == domain 1 score: 256.9 bits; conditional E-value: 9.9e-80 AA3.hmm 85 lskeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedl 123 + +++yD++i+G+G+aG+ lA+rLs a +vlllEaG++ l 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 23 DLATDYDYIIIGAGTAGGYLAHRLSTAnstkSVLLLEAGPNTL 65 67899************************9999*******987 PP AA3.hmm 124 nee.......kkliede.vklds..................te 140 + + ++l 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 66 SSSgsneienP-----NlFSL-VpgnfvenvaqsrtnylykIA 102 76675444431.....22222.012234445555656777755 PP AA3.hmm 141 pq..lngrriilprgkvlGGsslinamvylrgqaedfdawaee 181 pq l++r +++ rgk+lGGss+in+m +++g + d+d+wa+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 103 PQtaLENRVLTYHRGKGLGGSSAINYMAWVKGYKGDYDEWAQI 145 5678*************************************** PP AA3.hmm 182 .g.egwswddllpyfkkaeell..................... 201 + s ++ + k++e++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 146 aNdSAFSGTEGWERIKRLEDFDptglpisyspyaapdlanhgn 188 743446668888999****999999999999888888888777 PP AA3.hmm 202 ................r.......................... 202 + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 189 sgpihnslpknpipglTtfidgcieagipksldlnsgkiigag 231 7777666666655555055555666666666677777777788 PP AA3.hmm 203 .........rrssaakayldplpa........pnleiltnarv 228 +r s+a+ l+++ + pnl+i ++rv 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 232 iaqmaiykgARVSSATQCLNSRGDlgaglrkqPNLDIKVDTRV 274 88888888977777777777744345788899*********** PP AA3.hmm 229 tkilf...........agtl.vaakeVilaaGaigspqlLllS 259 +ki+f g++ +a+ eVi++aG i sp+lLllS 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 275 EKIIFdglkavgvqvaGGRIyRAKGEVIISAGFIDSPKLLLLS 317 *****9998866655433677********************** PP AA3.hmm 260 gigpaee.eslgipvvvdlp.vgenlq................ 284 gigp+++ e+l+ipvv d p vg+nl 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 318 GIGPKKDlEALNIPVVSDSPnVGKNLLdhptilldpifkqdlr 360 ******************************************* PP AA3.hmm 285 ........................................... 284 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 361 vptgnsfwknpdhvlwekkkwidtynssagegegemtlfggsa 403 ******************************************* PP AA3.hmm 285 ........................................... 284 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 404 gisflkfspeereqwpewkaltaeerarfldperpdteifyfl 446 ******************************************* PP AA3.hmm 285 ........................apks....svrlnssdpld 299 +++s ++ l++s+p++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 447 gylppgksipagsepnsyarlfllQQNSlsrgYISLSTSNPAE 489 ***********************9545556889********** PP AA3.hmm 300 pplidpnylsderdvellvegvr.................... 322 +pli+p+yls++ dv+l+ve v+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 490 QPLINPQYLSHPYDVRLAVETVKaavkifktkslsavftgmef 532 ************99*999999999999**************** PP AA3.hmm 323 ...............................eeetdd...... 328 + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 533 vgvnedppfirdspeqeeknrekgklsggfyI----Ngieltd 571 ****9999999887766665555555555551....0555555 PP AA3.hmm 329 ......tree.iqtiyHpvGtcrmged.dasaVVdpnlrvhgv 363 re+ + +yH +Gtcrmg d+ VVd+ +rv gv 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 572 agiekwLREKgLGQGYHGMGTCRMGAAgDPLRVVDSGGRVVGV 614 69999999999**************99*99************* PP AA3.hmm 364 enLrvvDasvfPtilggnpnltivaiaeraadlikkdngkqly 406 +Lrv+D sv+P +p+ +++ +a +ad i+kd + +++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 615 TGLRVADTSVIPVVMNNHPQVPAYLVADVVADSILKDSRGRDN 657 *************************************999988 PP AA3.hmm 407 er 408 ++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 658 TD 659 76 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 194.1 0.0 9.6e-61 9.6e-61 2 588 .. 27 651 .. 26 652 .. 0.82 Alignments for each domain: == domain 1 score: 194.1 bits; conditional E-value: 9.6e-61 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnl...d 41 ++D ii+G+Gtag+ a Rl++a+ + +vll+e+G+n+l + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTANSTKSVLLLEAGPNTLsssG 69 79**********************************9762225 PP AA3_3.hmm 42 dplvvkPalf.......lsnlkpesktalfykaekseeldgRe 77 ++++ +P lf ++n ++s+t +yk +++ l++R 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 70 SNEIENPNLFslvpgnfVEN-VAQSRTNYLYKIAPQTALENRV 111 67898888763321110333.458999999************* PP AA3_3.hmm 78 livpaggvlGGGssinflmYtraqasDfdsw....kteGWsak 116 l g+ lGG s+in++ + ++ + D+d+w + +s+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 112 LTYHRGKGLGGSSAINYMAWVKGYKGDYDEWaqiaNDSAFSGT 154 *******************************888766788889 PP AA3_3.hmm 117 dllpllkkletyqgkg...........deevhGkeGPikvskG 148 + + +k+le + +g d + hG++GPi+ s 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 155 EGWERIKRLEDFDPTGlpisyspyaapDLANHGNSGPIHNSLP 197 9999999999998887777777777777889************ PP AA3_3.hmm 149 tytskrveddfleaaeelgipevdDlqdlets.ngveralryv 190 + + + f+++ e+gip++ Dl+ + g+ +++ y 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 198 KNPIP-GLTTFIDGCIEAGIPKSLDLNSGKIIgAGIAQMAIY- 238 99999.7789****************9987651455555554. PP AA3_3.hmm 191 srdGrRqDaAhaylhpklksg....kkpnLhvlveskvsrvlf 229 +G R +A++ l ++ + g k+pnL + v+++v++++f 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 239 --KGARVSSATQCLNSRGDLGaglrKQPNLDIKVDTRVEKIIF 279 ..8************987654223379**************** PP AA3_3.hmm 230 enkravgvelvpnkafqkeaksksrtvkarklvvvsaGalgtP 272 ++ +avgv++ r+++a+ v++saG + +P 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 280 DGLKAVGVQVAG-----------GRIYRAKGEVIISAGFIDSP 311 ********9853...........578999************** PP AA3_3.hmm 273 lvLeRsGiGakevLekagvkvvvdlpgvGenyqDHklllv..p 313 ++L sGiG k+ Le ++++vv+d p vG+n+ DH ++l + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 312 KLLLLSGIGPKKDLEALNIPVVSDSPNVGKNLLDHPTILLdpI 354 ***********************************98876335 PP AA3_3.hmm 314 yraalepsetldallrgrkdveealk...........ekkgil 345 +++ l t +++ ++ ++v + k e++g + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 355 FKQDL-RVPTGNSFWKNPDHVLWEKKkwidtynssagEGEGEM 396 78885.5677788877776554433345567888888788888 PP AA3_3.hmm 346 gtngidvgv...klRPteeevealgpeFkeawdrdfkn..kpd 383 + g +g+ k+ P e e pe+k+ +++ ++ p+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 397 TLFGGSAGIsflKFSPEERE---QWPEWKALTAEERARflDPE 436 88777777621255555544...45666665554443322799 PP AA3_3.hmm 384 kplmllavvagflgdpslv....pekkyltlsaftayPysrGs 422 +p + + ++ g+l +++ +++ y l+ + srG 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 437 RPDTEIFYFLGYLPPGKSIpagsEPNSYARLFLLQQNSLSRGY 479 999999999888877677666668999**************** PP AA3_3.hmm 423 ihitspdpeeeidFetgflkdkaDlkklvwaYkkqReiaRR.. 463 i ++p+e++ + +l+++ D++ v + k i++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 480 ISLSTSNPAEQPLINPQYLSHPYDVRLAVETVKAAVKIFKTks 522 *********************************9999998622 PP AA3_3.hmm 464 .mdvyrg.el..aaahPkfakgskaalveldaekkeskkkved 502 v++g e+ P+f ++s+ + ++ +k + + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 523 lSAVFTGmEFvgVNEDPPFIRDSPEQEEKN--REKGKLSGGFY 563 2457888555223578*******9988777..34444444456 PP AA3_3.hmm 503 ieYtaeDdaaiedwvren.vettWhslgtckmaprek.ggvvd 543 i+ + da ie+w+re+ + +h +gtc+m++ + vvd 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 564 INGIELTDAGIEKWLREKgLGQGYHGMGTCRMGAAGDpLRVVD 606 77777789********875999**********98766489*** PP AA3_3.hmm 544 kkLnvyGvegLkvaDlsivPenvgantnstallvGekaadiil 586 + v Gv+gL+vaD s++P + + a+lv + ad il 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 607 SGGRVVGVTGLRVADTSVIPVVMNNHPQVPAYLVADVVADSIL 649 ********************98888889999999999998887 PP AA3_3.hmm 587 ke 588 k+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 650 KD 651 76 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 57.7 0.0 2.3e-19 2.3e-19 4 124 .. 16 142 .. 13 165 .. 0.74 2 ! 47.3 0.0 3.2e-16 3.2e-16 214 341 .. 261 373 .. 231 401 .. 0.80 3 ! 35.7 0.0 1e-12 1e-12 403 546 .. 471 650 .. 457 652 .. 0.75 Alignments for each domain: == domain 1 score: 57.7 bits; conditional E-value: 2.3e-19 AA3_1.hmm 4 taapaatpvaketyDyivvGaGagGivvAdrLs..eagkkvLL 44 a+pa tp ++ yDyi++GaG++G +A+rLs ++ k+vLL 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 16 LASPA-TPDLATDYDYIIIGAGTAGGYLAHRLStaNSTKSVLL 57 56666.8888999*******************9656779**** PP AA3_1.hmm 45 lekGgpstyatggtekpewlentnltrfDvpg.lcneilad.. 84 le G+ ++ ++g++ ++ en nl vpg +++++++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 58 LEAGPNTLSSSGSN-EI---ENPNLFSL-VPGnFVENVAQSrt 95 ****7777777765.33...34555443.66633333333321 PP AA3_1.hmm 85 .ssgvactdta.......qmagcvlGGgtavNaglfvkpqasd 119 + ++ +ta g+ lGG++a+N++ +vk + d 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 96 nYLYKIAPQTAlenrvltYHRGKGLGGSSAINYMAWVKGYKGD 138 122244555556676787789********************** PP AA3_1.hmm 120 fddkf 124 +d+ + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 139 YDE-W 142 *84.4 PP == domain 2 score: 47.3 bits; conditional E-value: 3.2e-16 AA3_1.hmm 214 kkrsNfklilntkVkrvvrsggkvtGVevessgGqrevikvt. 255 +k++N +++ +t+V++++ g k++GV+v gG ++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 261 RKQPNLDIKVDTRVEKIIFDGLKAVGVQVA--GG-----RIYr 296 5789*************************9..55.....2333 PP AA3_1.hmm 256 kggrVilsAGalsspkiLlrSGigpkdqlevvkasasdgvtli 298 ++g+Vi+sAG + spk+Ll SGigpk+ le ++ ++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 297 AKGEVIISAGFIDSPKLLLLSGIGPKKDLEALNI------PVV 333 89****************************9992......333 PP AA3_1.hmm 299 aksdwinlpvGknlkdhpntdlkiktke.isaydfyealtspi 340 ++ + +vGknl dhp + l+ k+ + ++ +++p+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 334 SD----SPNVGKNLLDHPTILLDPIFKQdLRVPTGNSFWKNPD 372 33....478*********9999855555587777778888876 PP AA3_1.hmm 341 t 341 + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 373 H 373 5 PP == domain 3 score: 35.7 bits; conditional E-value: 1e-12 AA3_1.hmm 403 trgltSrGrleitakg..ntvvskkpylsdaeDkeavaqfien 443 +++ SrG ++++++ + + + yls++ D + +++ ++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 471 QQNSLSRGYISLSTSNpaEQPLINPQYLSHPYDVRLAVETVKA 513 5666777777777654335556667777777777777777777 PP AA3_1.hmm 444 liaalsaasgltlvspasnttvedlvksll............. 473 ++ ++++s l+ v t ++v + 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 514 AVKIFKTKS-LSAV-----FTGMEFVGVNEdppfirdspeqee 550 777777764.4333.....233333333333334455556777 PP AA3_1.hmm 474 ............................vsvakrsanHwmgta 488 + + ++ H mgt+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 551 knrekgklsggfyingieltdagiekwlREKGLGQGYHGMGTC 593 77777777777777777777777777778888999******** PP AA3_1.hmm 489 klGtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNpsa 531 ++G + + +vvD +V+G+ L V+D S++p ++ p++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 594 RMGA-AGDPLRVVDSGGRVVGVTGLRVADTSVIPVVMNNHPQV 635 ***6.58999********************************* PP AA3_1.hmm 532 iimvaaekaaekila 546 +a+ a il+ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 636 PAYLVADVVADSILK 650 ***********9997 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 3.7 0.0 0.0069 0.0069 3 45 .. 27 71 .. 25 97 .. 0.85 2 ! 7.0 0.0 0.00073 0.00073 266 319 .. 297 359 .. 244 389 .. 0.71 3 ! 8.4 0.0 0.00027 0.00027 465 529 .. 584 649 .. 575 652 .. 0.86 Alignments for each domain: == domain 1 score: 3.7 bits; conditional E-value: 0.0069 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqdskvigeh 45 ++d +i+G+G G A+ l ++ +vl++e G ++ + g++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTanSTKSVLLLEAGPNTLSSSGSN 71 6899****************99656778*******9877666654 PP == domain 2 score: 7.0 bits; conditional E-value: 0.00073 AA3_4.hmm 266 kakvyviaaGavltpqiLanSgfgke.........keellpaL 299 ++i+aG + +p++L Sg+g + + p++ 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 297 AKGEVIISAGFIDSPKLLLLSGIGPKkdlealnipVVSDSPNV 339 3346799****************99989999888866778999 PP AA3_4.hmm 300 gkylteqsmafcqvvLkkel 319 gk+l ++++ + + ++k++l 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 340 GKNLLDHPTILLDPIFKQDL 359 *****999988888877776 PP == domain 3 score: 8.4 bits; conditional E-value: 0.00027 AA3_4.hmm 465 glalhitGttragk.dketsvvdenskvwgfknLyvGGngvIp 506 g h Gt r+g + vvd+ ++v g++ L v+ +vIp 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 584 GQGYHGMGTCRMGAaGDPLRVVDSGGRVVGVTGLRVADTSVIP 626 5567899*******657889*********************** PP AA3_4.hmm 507 tafaaNPtlTsvafAikgaekiv 529 + P + + +A a++i 1188961|Tubbor1_GeneCatalog_proteins_20160610.aa.fasta|AA3_2|AA3_2 627 VVMNNHPQVPAYLVADVVADSIL 649 *9999998888888877777776 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (662 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 68.34 // Query: 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 [L=657] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.4e-137 446.2 0.0 6.2e-137 446.0 0.0 1.0 1 AA3_2.hmm 1.4e-77 249.8 0.0 1.7e-77 249.5 0.0 1.0 1 AA3.hmm 1.9e-65 209.7 0.0 6.4e-65 207.9 0.0 2.2 1 AA3_3.hmm 6.4e-43 135.4 0.8 6.5e-18 52.9 0.1 3.3 3 AA3_1.hmm 4.5e-09 24.2 0.0 0.00013 9.4 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 446.0 0.0 6.2e-137 6.2e-137 2 567 .. 27 650 .. 26 651 .. 0.86 Alignments for each domain: == domain 1 score: 446.0 bits; conditional E-value: 6.2e-137 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLse.dpnvsVlviEaGgdeen... 40 +yDY+i+G+GtAG +A+rLs d++ sVl++E G++ + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTaDSKKSVLLLETGPNTLSsdg 69 7********************97899**********9876533 PP AA3_2.hmm 41 dplidvpglagsllgs........eldwnyttepqkglnnrsi 75 ++i++p+l++ + g+ + ++ y +pq++l+nr++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 70 ANEIENPNLYSLVPGNfaenvaqpRTNYLYPIAPQAELENRVL 112 59999999888775445555776799***************** PP AA3_2.hmm 76 klprGkvlGGssaiNamlytrgskadydaWaellgnegWswdn 118 +++rGk+lGG+saiN+m+++ g k+dyd+Wa+ +++ +s + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 113 TYHRGKGLGGTSAINYMAWVKGYKGDYDEWAQIANDSAFSGAE 155 ******************************************* PP AA3_2.hmm 119 llpyfkksetftppdeeq.deanitydasvhgtsGplkvsfpe 160 + +k+ e+f + + + + d s hg+sGp++ s p+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 156 GWERIKRLENFDASGLPAsYSRYAAPDLSDHGSSGPIHNSLPK 198 *************6544336778889***************** PP AA3_2.hmm 161 easplskallealeelGvptnkdlnsgdalGvslvpstidptt 203 + p + +++++ e+G+p++ dlnsg+++G+s+++ +i + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 199 NPIPGIATFIDGCVEAGIPKSLDLNSGKNIGASIAQMAIYK-- 239 *****************************************.. PP AA3_2.hmm 204 gtRssaatayldp.......vekrsnltvltnatvtkilfdst 239 g+R+s+at+ l++ ++k++nl++ ++++v+k++fd+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 240 GSRASSATQCLNSegdlgagLRKQPNLDIKVDTRVEKVIFDGL 282 ************88888877799******************** PP AA3_2.hmm 240 kkkatGVevtkkdgkkytvkarkEVILsaGainsPqlLmlSGi 282 ka GV+v g + ++a++EVI+saG i+sP+lL+lSG+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 283 --KAVGVQVVG--G--HIYRAKREVIISAGFIDSPKLLLLSGV 319 ..9******99..5..5899*********************** PP AA3_2.hmm 283 GpkeeLeklgIpvvvdlpgVGenLqDhllvpvsfevkepl..e 323 Gpk +Le+l+I+vv+d p+VG+n+ Dh ++ + +++++ + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 320 GPKRDLEALNITVVSDSPNVGKNMLDHSTTLLDPIFRQDFhvP 362 *****************************99876666655337 PP AA3_2.hmm 324 tldellsdptvaaealaeylan.......ktGpltssv.sevl 358 t + ++++p + ++ ++++ + ++G +t + s+++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 363 TGNLFWRNPDHVLWEKKKWIDTynsglgeGEGEMTLFGgSSAI 405 777789**************98444554444555543336666 PP AA3_2.hmm 359 afvklpeilskeeks...nlaslaaqeella.dedvpdlelvl 397 af+k +++ee + + ++l+a+e++ + d+d pd e+++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 406 AFIK----FTPEEREqwpEWKALTAEERARFlDPDRPDTEIFY 444 6666....4444442112344444444444469********** PP AA3_2.hmm 398 vplalntaes...paeg..knylsilvvllkplSrGsvklasa 435 + ++l+ ++ + ++y+ + ++ ++ l rG+++l+s+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 445 FLGYLPPGKTipaG--SepNSYARLFLLQQNNLARGTISLKSS 485 99999988887542..23479********************** PP AA3_2.hmm 436 dpldkplidpnylsdplDlevlvegvklarkiastkalkelv. 477 +p+++pli+p+y+s+p+D++++ve vk+a ki++tk+l++l 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 486 NPAEEPLINPQYFSHPYDVRIAVETVKVAVKIFKTKSLSALFt 528 ****************************************962 PP AA3_2.hmm 478 ......aeevapg........................aevq.. 488 a+e p+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 529 gmefvgATED-PPfirdspeqekknfekaklsggfyiN--Gie 568 3332222222.225777777777777666666665542..044 PP AA3_2.hmm 489 .sdeeleeyiresl.stvyHpvGTcamgpre.kggVVDselrV 528 +d+e+e+++r++ + yH +GTc+mg + + VVDs rV 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 569 lTDAEIEKWLRKKGlGQGYHGMGTCRMGAASdPLRVVDSGGRV 611 59*********98779************99999********** PP AA3_2.hmm 529 yGvknLRVvDaSvfPllvsahtqatvyavAekaAdlIke 567 Gv++LRV+D+Sv+P++++ h+q +y vA +Ad I++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 612 VGVEGLRVADTSVVPVVMNNHPQVSAYLVADVVADSIIN 650 *************************************87 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 249.5 0.0 1.7e-77 1.7e-77 85 401 .. 23 652 .. 20 656 .. 0.86 Alignments for each domain: == domain 1 score: 249.5 bits; conditional E-value: 1.7e-77 AA3.hmm 85 lskeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedl 123 + +++yD++i+G+G+aG+ lA+rLs a +vlllE G++ l 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 23 SLNTDYDYIIIGAGTAGGYLAHRLSTAdskkSVLLLETGPNTL 65 6789*************************9999*******988 PP AA3.hmm 124 nee.....kklied........evklds............... 138 + + + + + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 66 SSDganeiE----NpnlyslvpG----Nfaenvaqprtnylyp 100 766754440....3322222331....1344455566677888 PP AA3.hmm 139 tepq..lngrriilprgkvlGGsslinamvylrgqaedfdawa 179 pq l++r +++ rgk+lGG+s+in+m +++g + d+d+wa 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 101 IAPQaeLENRVLTYHRGKGLGGTSAINYMAWVKGYKGDYDEWA 143 445567************************************* PP AA3.hmm 180 ee.g.egwswddllpyfkkaeell................... 201 + + s ++ + k++e++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 144 QIaNdSAFSGAEGWERIKRLENFDasglpasysryaapdlsdh 186 **743446667777999****9999999999998888888887 PP AA3.hmm 202 ...................r....................... 202 + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 187 gssgpihnslpknpipgiaTfidgcveagipksldlnsgknig 229 7777777666666655555055555556666666677777777 PP AA3.hmm 203 ...........rrssaakayldplpa........pnleiltna 226 r s+a+ l++ + pnl+i ++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 230 asiaqmaiykgSRASSATQCLNSEGDlgaglrkqPNLDIKVDT 272 8888888888966777777776633335789999********* PP AA3.hmm 227 rvtkilf...........agtl.vaakeVilaaGaigspqlLl 257 rv+k++f g++ +a++eVi++aG i sp+lLl 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 273 RVEKVIFdglkavgvqvvGGHIyRAKREVIISAGFIDSPKLLL 315 *******9988866555333566******************** PP AA3.hmm 258 lSgigpaee.eslgipvvvdlp.vgenlq.............. 284 lSg+gp+ + e+l+i+vv d p vg+n+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 316 LSGVGPKRDlEALNITVVSDSPnVGKNMLdhsttlldpifrqd 358 ******************************************* PP AA3.hmm 285 ........................................... 284 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 359 fhvptgnlfwrnpdhvlwekkkwidtynsglgegegemtlfgg 401 ******************************************* PP AA3.hmm 285 ........................................... 284 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 402 ssaiafikftpeereqwpewkaltaeerarfldpdrpdteify 444 ******************************************* PP AA3.hmm 285 ..........................apks....svrlnssdp 297 ++++ ++ l+ss+p 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 445 flgylppgktipagsepnsyarlfllQQNNlargTISLKSSNP 487 *************************955556788********* PP AA3.hmm 298 ldpplidpnylsderdvellvegvr.................. 322 ++ pli+p+y+s++ dv+ +ve v+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 488 AEEPLINPQYFSHPYDVRIAVETVKvavkifktkslsalftgm 530 **************9**********9999************** PP AA3.hmm 323 ..................................eeetdd... 328 + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 531 efvgatedppfirdspeqekknfekaklsggfyiN----Giel 569 ******99999999888777666666666666651....0444 PP AA3.hmm 329 ........tree.iqtiyHpvGtcrmged.dasaVVdpnlrvh 361 r++ + +yH +Gtcrmg d+ VVd+ +rv 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 570 tdaeiekwLRKKgLGQGYHGMGTCRMGAAsDPLRVVDSGGRVV 612 4457889988889**************999999********** PP AA3.hmm 362 gvenLrvvDasvfPtilggnpnltivaiaeraadlikkdn 401 gve+Lrv+D sv+P +p+ +++ +a +ad i++d 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 613 GVEGLRVADTSVVPVVMNNHPQVSAYLVADVVADSIINDS 652 ************************************9986 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 207.9 0.0 6.4e-65 6.4e-65 2 588 .. 27 651 .. 26 653 .. 0.82 Alignments for each domain: == domain 1 score: 207.9 bits; conditional E-value: 6.4e-65 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnl...d 41 ++D ii+G+Gtag+ a Rl++ad + +vll+e+G+n+l + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTADSKKSVLLLETGPNTLssdG 69 79**********************************9862224 PP AA3_3.hmm 42 dplvvkPalf......lsnlkpesktalfykaekseeldgRel 78 +++ +P l+ + ++ +t +y ++++el++R l 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 70 ANEIENPNLYslvpgnFAENVAQPRTNYLYPIAPQAELENRVL 112 578999998833321112334467788899999********** PP AA3_3.hmm 79 ivpaggvlGGGssinflmYtraqasDfdsw....kteGWsakd 117 g+ lGG s+in++ + ++ + D+d+w + +s+ + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 113 TYHRGKGLGGTSAINYMAWVKGYKGDYDEWaqiaNDSAFSGAE 155 ******************************8887667889999 PP AA3_3.hmm 118 llpllkkletyqgkg...........deevhGkeGPikvskGt 149 + +k+le++ +g d + hG++GPi+ s + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 156 GWERIKRLENFDASGlpasysryaapDLSDHGSSGPIHNSLPK 198 999999999998877777676666777789************9 PP AA3_3.hmm 150 ytskrveddfleaaeelgipevdDlqdletsngveralryvsr 192 + f+++ e+gip++ Dl+ ++ g++ a+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 199 NPIP-GIATFIDGCVEAGIPKSLDLNSGKNI-GASIAQ-MAIY 238 9999.6778****************998887.554444.4446 PP AA3_3.hmm 193 dGrRqDaAhaylhpklksg....kkpnLhvlveskvsrvlfen 231 +G R +A++ l ++ + g k+pnL + v+++v++v+f++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 239 KGSRASSATQCLNSEGDLGaglrKQPNLDIKVDTRVEKVIFDG 281 8************986654223379****************** PP AA3_3.hmm 232 kravgvelvpnkafqkeaksksrtvkarklvvvsaGalgtPlv 274 +avgv++v ++++a++ v++saG + +P++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 282 LKAVGVQVVG-----------GHIYRAKREVIISAGFIDSPKL 313 ******9975...........4689****************** PP AA3_3.hmm 275 LeRsGiGakevLekagvkvvvdlpgvGenyqDHklllv..pyr 315 L sG+G k+ Le ++++vv+d p vG+n DH ++l ++r 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 314 LLLSGVGPKRDLEALNITVVSDSPNVGKNMLDHSTTLLdpIFR 356 *********************************9887633688 PP AA3_3.hmm 316 aalepsetldallrgrkdveealk...........ekkgilgt 347 + + t + + r+ ++v + k e++g ++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 357 QD-FHVPTGNLFWRNPDHVLWEKKkwidtynsglgEGEGEMTL 398 88.5677888888877665444334556778898855555544 PP AA3_3.hmm 348 ...ngidvgvklRPteeevealgpeFkeawdrdfkn..kpdkp 385 + + +k+ P e e pe+k+ +++ ++ pd+p 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 399 fggSSAIAFIKFTPEEREQW---PEWKALTAEERARflDPDRP 438 10044445567777666644...55555444433322279*** PP AA3_3.hmm 386 lmllavvagflgdpslv....pekkyltlsaftayPysrGsih 424 + + ++ g+l +++ +++ y l+ + +rG+i 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 439 DTEIFYFLGYLPPGKTIpagsEPNSYARLFLLQQNNLARGTIS 481 9999999999887777766778999****************** PP AA3_3.hmm 425 itspdpeeeidFetgflkdkaDlkklvwaYkkqReiaRRm... 464 +s++p+ee+ + +++++ D++ v + k i++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 482 LKSSNPAEEPLINPQYFSHPYDVRIAVETVKVAVKIFKTKsls 524 *******************************999999865111 PP AA3_3.hmm 465 dvyrg.el..aaahPkfakgskaalveldaekkeskkkvedie 504 +++g e+ a+ P+f ++s+ + ++ +ek++ + + i+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 525 ALFTGmEFvgATEDPPFIRDSPEQEKKN-FEKAKLSGGF-YIN 565 46887555334679*******9988877.7777776655.567 PP AA3_3.hmm 505 YtaeDdaaiedwvren.vettWhslgtckmaprek.ggvvdkk 545 + da ie+w+r++ + +h +gtc+m++ + vvd+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 566 GIELTDAEIEKWLRKKgLGQGYHGMGTCRMGAASDpLRVVDSG 608 7777799******9865999**********98766489***** PP AA3_3.hmm 546 LnvyGvegLkvaDlsivPenvgantnstallvGekaadiilke 588 v GvegL+vaD s+vP + + +a+lv + ad i+++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 609 GRVVGVEGLRVADTSVVPVVMNNHPQVSAYLVADVVADSIIND 651 ******************999999999*****99999888765 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 52.9 0.1 6.5e-18 6.5e-18 10 124 .. 21 142 .. 13 159 .. 0.73 2 ! 41.5 0.0 1.8e-14 1.8e-14 193 321 .. 233 352 .. 218 418 .. 0.79 3 ! 37.8 0.0 2.3e-13 2.3e-13 464 546 .. 570 650 .. 548 652 .. 0.90 Alignments for each domain: == domain 1 score: 52.9 bits; conditional E-value: 6.5e-18 AA3_1.hmm 10 tpvaketyDyivvGaGagGivvAdrLs..eagkkvLLlekGgp 50 tp ++ yDyi++GaG++G +A+rLs +++k+vLLle G+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 21 TPSLNTDYDYIIIGAGTAGGYLAHRLStaDSKKSVLLLETGPN 63 6777899*******************9667789********76 PP AA3_1.hmm 51 styatggtekpewlentnltrfDvpglcneiladssgvactdt 93 ++ + g + ++e n nl vpg + e +a+ + + + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 64 TLSSDGAN-EIE---NPNLYSL-VPGNFAENVAQPRTNYLYPI 101 66666664.433...4455443.66655555555222222222 PP AA3_1.hmm 94 a...........qmagcvlGGgtavNaglfvkpqasdfddkf 124 a g+ lGG +a+N++ +vk + d+d ++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 102 ApqaelenrvltYHRGKGLGGTSAINYMAWVKGYKGDYD-EW 142 222245666666789***********************8.44 PP == domain 2 score: 41.5 bits; conditional E-value: 1.8e-14 AA3_1.hmm 193 ppfmisngerggPlatYLps.....A..kkrsNfklilntkVk 228 ++++i +g r++++++ L+s A +k++N +++ +t+V+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 233 AQMAIYKGSRASSATQCLNSegdlgAglRKQPNLDIKVDTRVE 275 56777777777777777766333321336899*********** PP AA3_1.hmm 229 rvvrsggkvtGVevessgGqrevikvt.kggrVilsAGalssp 270 +v+ g k++GV+v gG+ + ++ +Vi+sAG + sp 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 276 KVIFDGLKAVGVQVV--GGH-----IYrAKREVIISAGFIDSP 311 **************9..663.....3326688*********** PP AA3_1.hmm 271 kiLlrSGigpkdqlevvkasasdgvtliaksdwinlpvGknlk 313 k+Ll SG+gpk le ++ +t++++s +vGkn+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 312 KLLLLSGVGPKRDLEALN------ITVVSDS----PNVGKNML 344 **************9999......5556554....6899**99 PP AA3_1.hmm 314 dhpntdlk 321 dh+ t l+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 345 DHSTTLLD 352 99999886 PP == domain 3 score: 37.8 bits; conditional E-value: 2.3e-13 AA3_1.hmm 464 tvedlvksllvsvakrsanHwmgtaklGtddsggtsvvDlntk 506 t++++ k l + + ++ H mgt+++G +s+ +vvD + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 570 TDAEIEKWL-RKKGLGQGYHGMGTCRMGA-ASDPLRVVDSGGR 610 566666666.6888899***********6.5************ PP AA3_1.hmm 507 VyGtdNLfVvDASifpdlptgNpsaiimvaaekaaekila 546 V+G++ L V+D S++p ++ p++ +a+ a i++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 611 VVGVEGLRVADTSVVPVVMNNHPQVSAYLVADVVADSIIN 650 ***********************************99986 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 4.0 0.0 0.0058 0.0058 3 44 .. 27 70 .. 25 91 .. 0.84 2 ! 7.1 0.0 0.00066 0.00066 233 317 .. 271 357 .. 243 386 .. 0.71 3 ! 9.4 0.0 0.00013 0.00013 465 530 .. 584 650 .. 567 652 .. 0.90 Alignments for each domain: == domain 1 score: 4.0 bits; conditional E-value: 0.0058 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqdskvige 44 ++d +i+G+G G A+ l ++ +vl++e G ++ + g+ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTadSKKSVLLLETGPNTLSSDGA 70 6899****************88546788*******987655554 PP == domain 2 score: 7.1 bits; conditional E-value: 0.00066 AA3_4.hmm 233 etrctkleldeskekkieaaevkdLlk......nkdllvkakv 269 +tr++k+ L++ +++ + 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 271 DTRVEKVIF-------------DGLKAvgvqvvGGHIYRAKRE 300 444444433.............333332221112234445567 PP AA3_4.hmm 270 yviaaGavltpqiLanSgfgke.........keellpaLgkyl 303 ++i+aG + +p++L Sg+g + + p++gk++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 301 VIISAGFIDSPKLLLLSGVGPKrdlealnitVVSDSPNVGKNM 343 899****************998889888888567789999999 PP AA3_4.hmm 304 teqsmafcqvvLkk 317 ++s+++ + ++++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 344 LDHSTTLLDPIFRQ 357 99998876666655 PP == domain 3 score: 9.4 bits; conditional E-value: 0.00013 AA3_4.hmm 465 glalhitGttragk.dketsvvdenskvwgfknLyvGGngvIp 506 g h Gt r+g ++ vvd+ ++v g++ L v+ +v+p 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 584 GQGYHGMGTCRMGAaSDPLRVVDSGGRVVGVEGLRVADTSVVP 626 5667999*******777889*********************** PP AA3_4.hmm 507 tafaaNPtlTsvafAikgaekive 530 + P + + +A a++i++ 997404|Tubbr1_1_GeneCatalog_proteins_20190716.aa.fasta|AA3_2|AA3_2 627 VVMNNHPQVSAYLVADVVADSIIN 650 *******99999999888888876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (657 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02 # Mc/sec: 75.79 // Query: 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 [L=614] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-134 438.3 0.0 1.5e-134 438.1 0.0 1.0 1 AA3_2.hmm 2.3e-71 229.3 0.0 3e-71 228.9 0.0 1.0 1 AA3.hmm 4e-59 188.8 0.0 6.9e-47 148.4 0.0 3.1 3 AA3_3.hmm 7.1e-40 125.4 0.0 3.4e-26 80.2 0.0 2.9 2 AA3_1.hmm 2.7e-09 24.9 0.0 8.8e-06 13.3 0.0 3.0 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 438.1 0.0 1.5e-134 1.5e-134 2 567 .. 8 602 .. 7 603 .. 0.87 Alignments for each domain: == domain 1 score: 438.1 bits; conditional E-value: 1.5e-134 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLse.dpnvsVlviEaGgdeen.... 40 +yD++iVG+G AG+ +A+rLs +p ++l++EaG+d + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 8 HYDFIIVGAGPAGSYLAHRLSLaSPPPRILLLEAGPDTLSptpd 51 8********************956889********987653232 PP AA3_2.hmm 41 ......dplidvpglagsllgs.eldwnyttepqkglnnrsikl 77 + ++ +pg++ + ++s +l+++y t+pqk lnnr++ + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 52 spstnpNLKSLIPGMFIENVSSqRLNYMYFTTPQKDLNNRTLIY 95 22222234455665444333335********************* PP AA3_2.hmm 78 prGkvlGGssaiNamlytrgskadydaWaellgnegWswdnllp 121 +rGk+lGGssa+N+m+++ g +d+++Wae +g++ ++ d+ + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 96 HRGKGLGGSSALNYMAWVKGYLGDFQSWAEIVGDSAYGADEGWE 139 ******************************************** PP AA3_2.hmm 122 yfkksetftppdeeq.deanitydasvhgtsGplkvsfpeeasp 164 +k+ e+f p+ + + + ++ d + hg++G ++ + +++ p 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 140 RIKRLENFDPNGPPDvFDEFVKPDLNNHGRKGVIHNGSGKRVVP 183 **********887777566789********************** PP AA3_2.hmm 165 lskallealeelGvptnkdlnsgdalGvslvpstidpttgtRss 208 ka++ea+e++G+ ++ d+nsg+++Gv++v++++ + g Rss 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 184 GLKAFIEACEAVGIARTLDVNSGHPIGVGVVQHSVWK--GARSS 225 *************************************..***** PP AA3_2.hmm 209 aatayldp.......vekrsnltvltnatvtkilfdstkkkatG 245 aat+ l+ +++r+nl v +++ v++ilfd++ +a G 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 226 AATQLLNTpgdigagIKRRENLVVKVESKVERILFDGK--TAVG 267 *******77888887899********************..9*** PP AA3_2.hmm 246 VevtkkdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeLe 289 Ve+++ g+ +++a+kEVI+saG i++P+lL+lSG+Gpk+eLe 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 268 VELKS--GE--KYYASKEVIISAGFIDTPKLLLLSGVGPKKELE 307 ***99..65..689****************************** PP AA3_2.hmm 290 klgIpvvvdlpgVGenLqDhllvpvsfevkepl..etldellsd 331 klgI+v+++ p+VG+nL Dh ++ + +k++l +t ++l+ d 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 308 KLGIKVIHNSPNVGKNLLDHSTTLIDPIFKQDLeiPTGNALFAD 351 **********************99886666654449999***** PP AA3_2.hmm 332 ptvaaealaeylan.......ktGpltssv.sevlafvklpeil 367 p++++ + +++l++ ++G l + + s +af+k+p l 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 352 PSHLEMEKERWLSSynngageGSGELIRFGaSAGVAFFKFP--L 393 ************97444333333444433324444454433..3 PP AA3_2.hmm 368 skeeksnlasla.......aqeelladedvpdlelvlvplalnt 404 s+ ++ ++ +q+ l +d++ pd el++++++l++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 394 SERTS-----WPewnllnaTQKALFLDSKRPDTELFYFTGWLPS 432 34444.....2222244544666667***********9999999 PP AA3_2.hmm 405 aes....paegknylsilvvllkplSrGsvklasadpldkplid 444 +s +++ ++y+ i ++ ++ l rG++ las++p+d+p++d 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 433 GRSipegETP-NSYARIFLLHQNQLARGEIILASKNPDDPPVVD 475 9997543333.69******************************* PP AA3_2.hmm 445 pnylsdplDlevlvegvklarkiastkalkelva..eevapgae 486 p+y+++p+D++++ve vk++ ki++ k k+l a + g + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 476 PRYFEHPMDVRIAVETVKMVLKIFRGKRYKNLKAvnGFYVNGLD 519 *******************************9763377779999 PP AA3_2.hmm 487 vqsdeeleeyiresl.stvyHpvGTcamgpre.kggVVDselrV 528 +sd+ +e+++re+ + yH +GT +mg++ + VVDs ++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 520 DESDAGIERWLRERGlDQGYHGMGTMRMGKEGdPLRVVDSGGKI 563 99**********98769*************9999********** PP AA3_2.hmm 529 yGvknLRVvDaSvfPllvsahtqatvyavAekaAdlIke 567 +G k++R++D+Sv+P++++ h q +y v+ +A I++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 564 MGLKGIRIADTSVVPVVMNNHAQVSAYLVGDVIAGKILK 602 **********************************99985 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 228.9 0.0 3e-71 3e-71 86 399 .. 5 602 .. 2 608 .. 0.87 Alignments for each domain: == domain 1 score: 228.9 bits; conditional E-value: 3e-71 AA3.hmm 86 skeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlne 125 + ++yD++ivG+G+aGs lA+rLs a ++lllEaG++ l 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 5 ESDHYDFIIVGAGPAGSYLAHRLSLAspppRILLLEAGPDTLSP 48 679*************************9999*******98776 PP AA3.hmm 126 e..........kkliedevklds....................t 139 + k s t 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 49 TpdspstnpnlK----------SlipgmfienvssqrlnymyfT 82 666655543321..........0222223333445566778898 PP AA3.hmm 140 epq..lngrriilprgkvlGGsslinamvylrgqaedfdawaee 181 +pq ln+r++i+ rgk+lGGss+ n+m +++g df++wae 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 83 TPQkdLNNRTLIYHRGKGLGGSSALNYMAWVKGYLGDFQSWAEI 126 89999**************************************9 PP AA3.hmm 182 .g.egwswddllpyfkkaeell...................... 201 g ++ d+ + k++e++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 127 vGdSAYGADEGWERIKRLENFDpngppdvfdefvkpdlnnhgrk 170 975668889999**********9999999998888888887777 PP AA3.hmm 202 ...............r............................ 202 + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 171 gvihngsgkrvvpglKafieaceavgiartldvnsghpigvgvv 214 77766666665555505555566666666677777777888888 PP AA3.hmm 203 .......rrssaakayldp.lpa........pnleiltnarvtk 230 +rssaa+ l++ + +nl + +++v++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 215 qhsvwkgARSSAATQLLNTpG-DigagikrrENLVVKVESKVER 257 88899999*********9944.45699*99************** PP AA3.hmm 231 ilf.....ag.......tlvaakeVilaaGaigspqlLllSgig 262 ilf +g +++a+keVi++aG i +p+lLllSg+g 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 258 ILFdgktaVGvelksgeKYYASKEVIISAGFIDTPKLLLLSGVG 301 ***9877722555555457************************* PP AA3.hmm 263 paee.eslgipvvvdlp.vgenlq.................... 284 p++e e+lgi+v+++ p vg+nl 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 302 PKKElEKLGIKVIHNSPnVGKNLLdhsttlidpifkqdleiptg 345 ******************************************** PP AA3.hmm 285 ............................................ 284 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 346 nalfadpshlemekerwlssynngagegsgelirfgasagvaff 389 ******************************************** PP AA3.hmm 285 ............................................ 284 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 390 kfplsertswpewnllnatqkalfldskrpdtelfyftgwlpsg 433 ******************************************** PP AA3.hmm 285 ..................apks....svrlnssdpldpplidpn 306 ++++ ++ l+s++p dpp++dp+ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 434 rsipegetpnsyarifllHQNQlargEIILASKNPDDPPVVDPR 477 *****************9555556789999************** PP AA3.hmm 307 ylsderdvellvegvr.........................eee 325 y++++ dv+ +ve v+ + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 478 YFEHPMDVRIAVETVKmvlkifrgkryknlkavngfyvnglD-- 519 ***********************9999999999888765531.. PP AA3.hmm 326 tdd........tree.iqtiyHpvGtcrmged.dasaVVdpnlr 359 d+ re+ +yH +Gt rmg+ d+ VVd+ ++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 520 -DEsdagierwLRERgLDQGYHGMGTMRMGKEgDPLRVVDSGGK 562 .1134588899888899*************99*99********* PP AA3.hmm 360 vhgvenLrvvDasvfPtilggnpnltivaiaeraadlikk 399 g ++ r++D sv+P + + +++ ++ +a i+k 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 563 IMGLKGIRIADTSVVPVVMNNHAQVSAYLVGDVIAGKILK 602 ****************************999887777766 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 148.4 0.0 6.9e-47 6.9e-47 2 312 .. 8 332 .. 7 363 .. 0.84 2 ! 6.5 0.0 0.00065 0.00065 403 462 .. 441 500 .. 413 509 .. 0.84 3 ! 30.3 0.0 3.9e-11 3.9e-11 507 587 .. 520 602 .. 515 605 .. 0.89 Alignments for each domain: == domain 1 score: 148.4 bits; conditional E-value: 6.9e-47 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnld.... 41 +D ii+G+G ag+ a Rl+ a p ++ll+e+G+++l 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 8 HYDFIIVGAGPAGSYLAHRLSLASPPPRILLLEAGPDTLSptpd 51 69*********************************998632222 PP AA3_3.hmm 42 ....dplv..vkPalflsnlkpesktalfykaekseeldgReli 79 +p++ P +f++n++ + + y ++++++l++R+li 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 52 spstNPNLksLIPGMFIENVSSQRLNYM-YFTTPQKDLNNRTLI 94 2222343322569999999987665555.55678899******* PP AA3_3.hmm 80 vpaggvlGGGssinflmYtraqasDfdsw....kteGWsakdll 119 g+ lGG s++n++ + ++ Df+sw ++a++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 95 YHRGKGLGGSSALNYMAWVKGYLGDFQSWaeivGDSAYGADEGW 138 *****************************65544567999**** PP AA3_3.hmm 120 pllkkletyqgkg...........deevhGkeGPikvskGtyts 152 + +k+le++ +g d + hG +G i+ +G+ + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 139 ERIKRLENFDPNGppdvfdefvkpDLNNHGRKGVIHNGSGKRVV 182 *********9988777776677666789**************** PP AA3_3.hmm 153 krveddfleaaeelgipevdDlqdletsngveralryvsrdGrR 196 + + f+ea e++gi ++ D++ + gv +++ v +G R 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 183 P-GLKAFIEACEAVGIARTLDVNSGHPI-GVGVVQHSV-WKGAR 223 9.7899***************9987766.676666655.58*** PP AA3_3.hmm 197 qDaAhaylhpklksg....kkpnLhvlveskvsrvlfenkravg 236 + aA++ l + g +++nL v veskv+r+lf++k avg 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 224 SSAATQLLNTPGDIGagikRRENLVVKVESKVERILFDGKTAVG 267 ********98655431122689********************** PP AA3_3.hmm 237 velvpnkafqkeaksksrtvkarklvvvsaGalgtPlvLeRsGi 280 vel++ +++ a k v++saG + tP++L sG+ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 268 VELKSGEKY-----------YASKEVIISAGFIDTPKLLLLSGV 300 **9876655...........46689******************* PP AA3_3.hmm 281 GakevLekagvkvvvdlpgvGenyqDHklllv 312 G k+ Lek+g+kv+ + p vG+n+ DH ++l+ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 301 GPKKELEKLGIKVIHNSPNVGKNLLDHSTTLI 332 ***************************99875 PP == domain 2 score: 6.5 bits; conditional E-value: 0.00065 AA3_3.hmm 403 pekkyltlsaftayPysrGsihitspdpeeeidFetgflkdkaD 446 ++ y ++ + +rG+i s++p++++ + ++++++D 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 441 TPNSYARIFLLHQNQLARGEIILASKNPDDPPVVDPRYFEHPMD 484 5677888888899999**************************** PP AA3_3.hmm 447 lkklvwaYkkqReiaR 462 ++ v + k+ i+R 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 485 VRIAVETVKMVLKIFR 500 **99999988888777 PP == domain 3 score: 30.3 bits; conditional E-value: 3.9e-11 AA3_3.hmm 507 aeDdaaiedwvren.vettWhslgtckmaprek.ggvvdkkLnv 548 +e da ie w+re+ ++ +h +gt++m+ + vvd+ ++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 520 DESDAGIERWLRERgLDQGYHGMGTMRMGKEGDpLRVVDSGGKI 563 6889********8659************87655579******** PP AA3_3.hmm 549 yGvegLkvaDlsivPenvgantnstallvGekaadiilk 587 G++g+++aD s+vP + ++ +a+lvG+ a ilk 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 564 MGLKGIRIADTSVVPVVMNNHAQVSAYLVGDVIAGKILK 602 ****************999999********998877766 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.1 0.0 4.9e-14 4.9e-14 11 124 .. 3 123 .. 1 136 [. 0.80 2 ! 80.2 0.0 3.4e-26 3.4e-26 214 546 .. 242 602 .. 217 603 .. 0.84 Alignments for each domain: == domain 1 score: 40.1 bits; conditional E-value: 4.9e-14 AA3_1.hmm 11 pvaketyDyivvGaGagGivvAdrLseag..kkvLLlekGgpst 52 p+++++yD+i+vGaG++G +A+rLs a+ ++LLle G+ ++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 3 PAESDHYDFIIVGAGPAGSYLAHRLSLASppPRILLLEAGPDTL 46 578899********************8873369*******9999 PP AA3_1.hmm 53 yatggtekpewlentnltrfDvpglcneilad...ssgvactdt 93 t++ +p+ n nl +pg++ e +++ + +++t + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 47 SPTPD--SPST--NPNLKSL-IPGMFIENVSSqrlNYMYFTTPQ 85 99999..5555..6677554.89965554444366555777776 PP AA3_1.hmm 94 a........qmagcvlGGgtavNaglfvkpqasdfddkf 124 + g+ lGG++a+N++ +vk df+ ++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 86 KdlnnrtliYHRGKGLGGSSALNYMAWVKGYLGDFQ-SW 123 667788887789*****************9999984.45 PP == domain 2 score: 80.2 bits; conditional E-value: 3.4e-26 AA3_1.hmm 214 kkrsNfklilntkVkrvvrsggkvtGVevessgGqrevikvtkg 257 k r+N + ++kV+r+ g++++GVe++ +G++ ++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 242 KRRENLVVKVESKVERILFDGKTAVGVELK--SGEKY----YAS 279 67999************************9..77554....468 PP AA3_1.hmm 258 grVilsAGalsspkiLlrSGigpkdqlevvkasasdgvtliaks 301 ++Vi+sAG + +pk+Ll SG+gpk++le + +++i++s 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 280 KEVIISAGFIDTPKLLLLSGVGPKKELEKLG------IKVIHNS 317 9**************************8877......5555554 PP AA3_1.hmm 302 dwinlpvGknlkdhpntdlkiktke.isaydfyealtspit..e 342 +vGknl dh+ t ++ k+ ++ ++ +++p++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 318 ----PNVGKNLLDHSTTLIDPIFKQdLEIPTGNALFADPSHleM 357 ....68*************9766666999999999999998656 PP AA3_1.hmm 343 dkdlylnq..................................rs 352 +k+ +l++ + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 358 EKERWLSSynngagegsgelirfgasagvaffkfplsertswPE 401 667777667888**************************888877 PP AA3_1.hmm 353 Gilaqaaqniifweevkgadgrvrqlqwtasvegsaa.aaknna 395 l++a+q+ +f ++ + +d++ ++ + + s + n+ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 402 WNLLNATQKALFLDSKR-PDTELFYFTGWLPSGRSIPeGETPNS 444 88999999997777766.88888888776654444331445555 PP AA3_1.hmm 396 ltvsvyltrgltSrGrleitakg..ntvvskkpylsdaeDkeav 437 + l ++ +rG++ + +k + v + y+++++D + + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 445 YARIFLLHQNQLARGEIILASKNpdDPPVVDPRYFEHPMDVRIA 488 666667788889*******99776688899999*********** PP AA3_1.hmm 438 aqfienliaalsa..asgltlvsp....asnttvedlvksllvs 475 ++ ++ +++ ++ +++l+ v+ ++ +++ + l + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 489 VETVKMVLKIFRGkrYKNLKAVNGfyvnGLDDESDAGIERWLRE 532 *********99987788999875411113344444555555589 PP AA3_1.hmm 476 vakrsanHwmgtaklGtddsggtsvvDlntkVyGtdNLfVvDAS 519 + ++ H mgt ++G++ + +vvD k++G + + ++D S 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 533 RGLDQGYHGMGTMRMGKE-GDPLRVVDSGGKIMGLKGIRIADTS 575 999*************75.8889********************* PP AA3_1.hmm 520 ifpdlptgNpsaiimvaaekaaekila 546 ++p ++ ++ +++ +a kil+ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 576 VVPVVMNNHAQVSAYLVGDVIAGKILK 602 *****9999999999**********97 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 5.2 0.0 0.0024 0.0024 3 37 .. 8 44 .. 6 63 .. 0.83 2 ! 13.3 0.0 8.8e-06 8.8e-06 255 318 .. 268 339 .. 224 367 .. 0.76 3 ? 2.5 0.0 0.017 0.017 468 507 .. 539 579 .. 531 589 .. 0.87 Alignments for each domain: == domain 1 score: 5.2 bits; conditional E-value: 0.0024 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaq 37 ++d +i+G+Gp G+ A+ l + ++l++e G 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 8 HYDFIIVGAGPAGSYLAHRLSLasPPPRILLLEAGPD 44 79***************99876446778999998864 PP == domain 2 score: 13.3 bits; conditional E-value: 8.8e-06 AA3_4.hmm 255 kdLlknkdllvkakvyviaaGavltpqiLanSgfgke....... 291 +L++ +++ k ++i+aG + tp++L Sg+g + 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 268 VELKSGEKY-YASKEVIISAGFIDTPKLLLLSGVGPKkeleklg 310 356666655.467899******************9987888888 PP AA3_4.hmm 292 ..keellpaLgkylteqsmafcqvvLkke 318 ++ p++gk+l ++s+++ + ++k++ 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 311 ikVIHNSPNVGKNLLDHSTTLIDPIFKQD 339 77556778888888888888877777666 PP == domain 3 score: 2.5 bits; conditional E-value: 0.017 AA3_4.hmm 468 lhitGttragkd.ketsvvdenskvwgfknLyvGGngvIpt 507 h Gt+r+gk+ + vvd+ +k+ g+k + ++ +v+p 733282|Trihyb1_GeneCatalog_proteins_20161123.aa.fasta|AA3_2|AA3_2 539 YHGMGTMRMGKEgDPLRVVDSGGKIMGLKGIRIADTSVVPV 579 5779*******636789*****************9999996 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (614 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 68.58 // Query: 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 [L=551] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.1e-140 456.2 0.0 5.8e-140 456.0 0.0 1.0 1 AA3_2.hmm 4.7e-85 274.5 0.0 5.7e-85 274.2 0.0 1.0 1 AA3.hmm 6.5e-65 207.9 0.0 1.8e-44 140.4 0.0 3.0 3 AA3_3.hmm 4.6e-41 129.3 0.0 1e-16 48.9 0.0 3.3 3 AA3_1.hmm 8.6e-17 49.6 0.0 8.9e-11 29.8 0.0 3.0 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 456.0 0.0 5.8e-140 5.8e-140 2 566 .. 4 543 .. 3 545 .. 0.92 Alignments for each domain: == domain 1 score: 456.0 bits; conditional E-value: 5.8e-140 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsedpn.vsVlviEaGgdeendplid 45 ++D+++VG+G AG+ +AsrLs ++ sVl+iEaG+ +n +l d 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRTSTaPSVLLIEAGNVLDNPDLRD 48 8*********************76626************966666 PP AA3_2.hmm 46 vpglagsllgseldwnyttepqkglnnrsiklprGkvlGGssaiN 90 +++ +l + +l w + qk++n+rsi +prGk+lGGs+ N 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 49 AGRKFVNLADPSLGWADYSHTQKNVNGRSIIYPRGKGLGGSTMTN 93 667999*********999999************************ PP AA3_2.hmm 91 amlytrgskadydaWaellgnegWswdnllpyfkksetftppdee 135 am+y gs+++yd Wae +g+++W w ++++ f+++e+f++ +++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 94 AMVYYVGSSEEYDYWAEVTGCPKWRWPETKERFRRIERFHDDTPT 138 *******************************************99 PP AA3_2.hmm 136 qdeanitydasvhgtsGplkvsfpeeasplskallealeelGvpt 180 + ++ ++ +++ hg++Gp++vs p+ ++p ++++e +++ G+p+ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 139 EFRKYAHASPENHGSTGPIDVSLPSVWEPGVSKVFEIAQAHGYPI 183 9889999************************************** PP AA3_2.hmm 181 nkdlnsgdalGvslvpstidpttgtRssaatayldpvekrsnltv 225 n d+nsg+++G++l+p+t+++ g R++aa+a+ld+ + +nltv 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 184 NLDQNSGNPIGIGLSPTTVSH--GLRTTAASAFLDN--RPPNLTV 224 *********************..************7..89***** PP AA3_2.hmm 226 ltnatvtkilfdstkkkatGVevtkkdgkkytvkarkEVILsaGa 270 t+a + +ilfd++ +a GV++++ g+ +++ +k IL+aGa 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 225 WTDAVAARILFDGK--TAVGVQLAD--GR--RAHGSKATILCAGA 263 **************..9******99..55..899*********** PP AA3_2.hmm 271 insPqlLmlSGiGpkeeLeklgIpvvvdlpgVGenLqDhllvpvs 315 +++P++L+lSG+Gpke+L+ lgI vv+dl gVG+nLqDhl + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 264 LDTPKVLLLSGVGPKEDLDPLGIHVVHDLGGVGKNLQDHLQSLIE 308 ********************************************* PP AA3_2.hmm 316 fevkepletldellsdptvaaealaeylanktGpltssvsevlaf 360 +++++l + d +++d + + Gp++ + ++f 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 309 TRLSKKLLDRD-VARDG----------EPDTGGPWS---CLPFGF 339 ****9954433.33332..........346789*99...5569** PP AA3_2.hmm 361 vklpeilskeeksnlaslaaqeelladedvpdlelvl.vplalnt 404 +k++e l++ee+++l+ l+ +++l+ ++vp+l l + +pl+ + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 340 LKVEENLETEEFHQLDPLT--QNYLKGATVPQLSLGTaAPLFGRG 382 **********998777777..6778899*******9944554444 PP AA3_2.hmm 405 aespaegknylsilvvllkplSrGsvklasadpldkplidpnyls 449 ++ p+ + y + +l++p+SrG+v+l+sa+p+d+p d+n ls 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 383 RTFPDVS-YYHVYVNCLMNPQSRGEVRLRSANPADPPFFDFNALS 426 4445444.68888889***************************** PP AA3_2.hmm 450 dplDlevlvegvklarkiastkalkelvaeevapgaevqsdeele 494 +p+Dl+ v+ +++++++++ +a +e+ a ++ g++ +sd ++e 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 427 HPYDLRSYVNNTRRVMELIEGQANAEYFAGYIN-GPASKSDRDIE 470 **********************99999986665.66779****** PP AA3_2.hmm 495 eyireslstvyHpvGTcamgpre.kggVVDselrVyGvknLRVvD 538 ++++++ +H++GT+ mg+ e k ++VDs+++V+G +nL V+D 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 471 SWLKAVSGPQFHATGTVMMGKAEnKLACVDSDFQVFGLENLYVAD 515 **********************9999******************* PP AA3_2.hmm 539 aSvfPllvsahtqatvyavAekaAdlIk 566 Sv P+ + + tq+t+y+vAe aA ++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 516 LSVCPTTPCCMTQSTAYMVAETAAGTLI 543 ***********************97765 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 274.2 0.0 5.7e-85 5.7e-85 86 400 .. 1 545 [. 1 549 [. 0.86 Alignments for each domain: == domain 1 score: 274.2 bits; conditional E-value: 5.7e-85 AA3.hmm 86 skeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlnee 126 + +++D+++vG+GaaG+ lAsrLs++ +vll+EaG+ +n + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 1 MSNQFDFIVVGAGAAGCLLASRLSRTstapSVLLIEAGNVLDNPD 45 5789*************************999******9987754 PP AA3.hmm 127 .....kkliede.vkl.ds.........tepqlngrriilprgkv 155 + + v+l d+ t+++ ngr+ii+prgk+ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 46 lrdagR-----KfVNLaDPslgwadyshTQKNVNGRSIIYPRGKG 85 544431.....112222223444556557777************* PP AA3.hmm 156 lGGsslinamvylrgqaedfdawaee.g.egwswddllpyfkkae 198 lGGs++ namvy+ g+ e++d+wae g ++w+w + ++ f+++e 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 86 LGGSTMTNAMVYYVGSSEEYDYWAEVtGcPKWRWPETKERFRRIE 130 ***************************99**************** PP AA3.hmm 199 ell........................................r. 202 +++ + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 131 RFHddtptefrkyahaspenhgstgpidvslpsvwepgvskvfEi 175 ****99999999888888877777777766666666655555505 PP AA3.hmm 203 ..............................rrssaakayldplpa 217 r++aa+a+ld+ + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 176 aqahgypinldqnsgnpigiglspttvshgLRTTAASAFLDN--R 218 55566666666677777778888888888999********98..7 PP AA3.hmm 218 .pnleiltnarvtkilf...........agtl.vaakeVilaaGa 249 pnl+++t+a + +ilf g++ +k il+aGa 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 219 pPNLTVWTDAVAARILFdgktavgvqlaDGRRaHGSKATILCAGA 263 7****************9887755444433566999********* PP AA3.hmm 250 igspqlLllSgigpaee.eslgipvvvdlp.vgenlq........ 284 + +p++LllSg+gp+e+ lgi+vv+dl vg+nlq 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 264 LDTPKVLLLSGVGPKEDlDPLGIHVVHDLGgVGKNLQdhlqslie 308 ********************************************* PP AA3.hmm 285 ............................................. 284 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 309 trlskklldrdvardgepdtggpwsclpfgflkveenleteefhq 353 ********************************************* PP AA3.hmm 285 ............................................. 284 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 354 ldpltqnylkgatvpqlslgtaaplfgrgrtfpdvsyyhvyvncl 398 ********************************************* PP AA3.hmm 285 .apks..svrlnssdpldpplidpnylsderdvellvegvr.... 322 +p+s +vrl+s++p+dpp +d+n ls++ d++ v +r 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 399 mNPQSrgEVRLRSANPADPPFFDFNALSHPYDLRSYVNNTRrvme 443 *999999**********************8777777777776666 PP AA3.hmm 323 ...................eeetdd.....tree.iqtiyHpvGt 342 + ++d + + +H++Gt 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 444 liegqanaeyfagyingpaS-KSDRdieswL-KAvSGPQFHATGT 486 66677788888888776421.2333678954.4449999****** PP AA3.hmm 343 crmged.dasaVVdpnlrvhgvenLrvvDasvfPtilggnpnlti 386 +mg+ ++ a+Vd++ +v+g enL+v+D sv+Pt++++ +++t+ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 487 VMMGKAeNKLACVDSDFQVFGLENLYVADLSVCPTTPCCMTQSTA 531 ****998888*********************************** PP AA3.hmm 387 vaiaeraadlikkd 400 +++ae aa ++++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 532 YMVAETAAGTLIEK 545 ******98777765 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 140.4 0.0 1.8e-44 1.8e-44 2 317 .. 4 312 .. 3 333 .. 0.85 2 ! 13.2 0.0 5.9e-06 5.9e-06 383 452 .. 366 436 .. 344 456 .. 0.82 3 ! 50.8 0.0 2.5e-17 2.5e-17 509 590 .] 465 547 .. 457 547 .. 0.92 Alignments for each domain: == domain 1 score: 140.4 bits; conditional E-value: 1.8e-44 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddplvv 46 + D i++G+G+agc+ a+Rl+++ +vll+e+G n ld+p + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRTSTAPSVLLIEAG-NVLDNPDLR 47 679********************************.677999988 PP AA3_3.hmm 47 kPalflsnlkp.esktalfykaekseeldgRelivpaggvlGGGs 90 nl + a + ++++++++gR++i p g+ lGG 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 48 DAGRKFVNLADpSLGWADY--SHTQKNVNGRSIIYPRGKGLGGST 90 8776666655404444444..5566789***************** PP AA3_3.hmm 91 sinflmYtraqasDfdsw....kteGWsakdllpllkkletyqgk 131 n ++Y ++++++d w + W + + +++e ++ + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 91 MTNAMVYYVGSSEEYDYWaevtGCPKWRWPETKERFRRIERFHDD 135 ******************75554677****************987 PP AA3_3.hmm 132 g..........deevhGkeGPikvskGtytskrveddfleaaeel 166 + + e hG++GPi+vs ++ + ++++e a++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 136 TptefrkyahaSPENHGSTGPIDVSLPSVWEP-GVSKVFEIAQAH 179 766676666667789*************9999.677889****** PP AA3_3.hmm 167 gipevdDlqdletsngveralryvsrdGrRqDaAhaylhpklksg 211 g+p D + + g+ vs +G R aA+a+l ++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 180 GYPINLDQNSG-NPIGIGLSPTTVS-HGLRTTAASAFLDNR---- 218 ***99996554.4558887777776.7**********9764.... PP AA3_3.hmm 212 kkpnLhvlveskvsrvlfenkravgvelvpnkafqkeaksksrtv 256 pnL+v +++ r+lf++k avgv+l ++ + + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 219 -PPNLTVWTDAVAARILFDGKTAVGVQLADGRRAHGS-------- 254 .699***********************9988777664........ PP AA3_3.hmm 257 karklvvvsaGalgtPlvLeRsGiGakevLekagvkvvvdlpgvG 301 k+ ++ aGal tP+vL sG+G ke L+ +g++vv dl gvG 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 255 ---KATILCAGALDTPKVLLLSGVGPKEDLDPLGIHVVHDLGGVG 296 ...57899************************************* PP AA3_3.hmm 302 enyqDHklllvpyraa 317 +n+qDH l+ r + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 297 KNLQDHLQSLIETRLS 312 ******8877765544 PP == domain 2 score: 13.2 bits; conditional E-value: 5.9e-06 AA3_3.hmm 383 dkplmllavvagflgdpslvpekkyltl.saftayPysrGsihit 426 p + l ++a +g +++p+ y+ + + ++ P srG++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 366 TVPQLSLGTAAPLFGRGRTFPDVSYYHVyVNCLMNPQSRGEVRLR 410 55666777788888999999999888762567899********** PP AA3_3.hmm 427 spdpeeeidFetgflkdkaDlkklvw 452 s++p++++ F+ l+++ Dl+ v 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 411 SANPADPPFFDFNALSHPYDLRSYVN 436 ********************998765 PP == domain 3 score: 50.8 bits; conditional E-value: 2.5e-17 AA3_3.hmm 509 DdaaiedwvrenvettWhslgtckmaprek.ggvvdkkLnvyGve 552 d+ ie w+++ + +h+ gt+ m+ e+ + vd++ +v+G+e 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 465 SDRDIESWLKAVSGPQFHATGTVMMGKAENkLACVDSDFQVFGLE 509 6889*********************887762689*********** PP AA3_3.hmm 553 gLkvaDlsivPenvgantnstallvGekaadiilkeLG 590 +L vaDls++P ++ t+sta++v e aa +++ G 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 510 NLYVADLSVCPTTPCCMTQSTAYMVAETAAGTLIEKFG 547 ******************************99998876 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.3 0.0 2.1e-14 2.1e-14 14 142 .. 2 131 .. 1 145 [. 0.73 2 ! 35.1 0.0 1.6e-12 1.6e-12 193 321 .. 198 308 .. 183 319 .. 0.82 3 ! 48.9 0.0 1e-16 1e-16 407 545 .. 402 543 .. 384 545 .. 0.76 Alignments for each domain: == domain 1 score: 41.3 bits; conditional E-value: 2.1e-14 AA3_1.hmm 14 ketyDyivvGaGagGivvAdrLs..eagkkvLLlekGgpstyatg 56 ++++D+ivvGaGa+G +A+rLs + +vLL+e G+ + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 2 SNQFDFIVVGAGAAGCLLASRLSrtSTAPSVLLIEAGN--VLDNP 44 579********************4344569*******3..33444 PP AA3_1.hmm 57 gtekpewlentnltrfDvpglc.neiladssgvactdtaqmagcv 100 + + + + + p+l + +++++v + + g+ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 45 D--LRDA--GRKFVNLADPSLGwADYSHTQKNVNGRSIIYPRGKG 85 4..2222..44444444466551444455777889999999**** PP AA3_1.hmm 101 lGGgtavNaglfvkpqasdfddkfp.....kgwksedvqdaadrv 140 lGG+t+ Na++++ +++++d+ + w++ + ++ + r+ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 86 LGGSTMTNAMVYYVGSSEEYDY-WAevtgcPKWRWPETKERFRRI 129 ***************9999874.3312222679999999998887 PP AA3_1.hmm 141 fe 142 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 130 ER 131 65 PP == domain 2 score: 35.1 bits; conditional E-value: 1.6e-12 AA3_1.hmm 193 ppfmisngerggPlatYLpsAkkrsNfklilntkVkrvvrsggkv 237 +p +s+g r + +L + +N + ++++ r+ g+++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 198 SPTTVSHGLRTTAASAFLDN--RPPNLTVWTDAVAARILFDGKTA 240 56778999999999999985..789******************** PP AA3_1.hmm 238 tGVevessgGqrevikvtkggrVilsAGalsspkiLlrSGigpkd 282 +GV++ +G+r+ + +++ il AGal +pk+Ll SG+gpk+ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 241 VGVQLA--DGRRA----HGSKATILCAGALDTPKVLLLSGVGPKE 279 ****99..88554....578999********************** PP AA3_1.hmm 283 qlevvkasasdgvtliaksdwinlpvGknlkdhpntdlk 321 l + +++ vGknl+dh + ++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 280 DLDPLGIHV------VHD----LGGVGKNLQDHLQSLIE 308 **8776332......222....13688888888777665 PP == domain 3 score: 48.9 bits; conditional E-value: 1e-16 AA3_1.hmm 407 tSrGrleitakg..ntvvskkpylsdaeDkeavaqfienliaals 449 +SrG++++ ++ + + + ls++ D + +++ ++++ ++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 402 QSRGEVRLRSANpaDPPFFDFNALSHPYDLRSYVNNTRRVMELIE 446 567777776654344445555556777777777777777777777 PP AA3_1.hmm 450 aasgltl....vspasnttvedlvksllvsvakrsanHwmgtakl 490 +++ ++ ++ ++ ++++d+ + l + + H +gt + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 447 GQANAEYfagyINGPASKSDRDIESWL--KAVSGPQFHATGTVMM 489 655555411115778888888888888..56677889******** PP AA3_1.hmm 491 GtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNpsaiimv 535 G+ ++++ ++vD +++V+G +NL+V+D S+ p++p ++++ + 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 490 GK-AENKLACVDSDFQVFGLENLYVADLSVCPTTPCCMTQSTAYM 533 *6.6999************************************** PP AA3_1.hmm 536 aaekaaekil 545 +ae aa ++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 534 VAETAAGTLI 543 *****98766 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 3.6 0.0 0.0076 0.0076 3 36 .. 4 39 .. 2 52 .. 0.88 2 ! 12.7 0.0 1.4e-05 1.4e-05 267 322 .. 254 318 .. 208 358 .. 0.81 3 ! 29.8 0.0 8.9e-11 8.9e-11 464 531 .. 477 545 .. 441 546 .. 0.91 Alignments for each domain: == domain 1 score: 3.6 bits; conditional E-value: 0.0076 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGa 36 ++d +++G+G G+ A l + +vl++e G+ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRtsTAPSVLLIEAGN 39 79******************99656678*****997 PP == domain 2 score: 12.7 bits; conditional E-value: 1.4e-05 AA3_4.hmm 267 akvyviaaGavltpqiLanSgfgke.........keellpaLgky 302 k+ +++aGa tp++L Sg+g + + l +gk+ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 254 SKATILCAGALDTPKVLLLSGVGPKedldplgihVVHDLGGVGKN 298 6899******************99877777776655666667999 PP AA3_4.hmm 303 lteqsmafcqvvLkkelves 322 l ++ ++ ++ L+k+l+++ 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 299 LQDHLQSLIETRLSKKLLDR 318 99999999999999999875 PP == domain 3 score: 29.8 bits; conditional E-value: 8.9e-11 AA3_4.hmm 464 pglalhitGttragk.dketsvvdenskvwgfknLyvGGngvIpt 507 g ++h tGt+ +gk +++ ++vd++ +v+g++nLyv+ +v pt 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 477 SGPQFHATGTVMMGKaENKLACVDSDFQVFGLENLYVADLSVCPT 521 57789**********88899************************* PP AA3_4.hmm 508 afaaNPtlTsvafAikgaekivek 531 + + T+ +A +a +++ek 151817|Claim1_GeneCatalog_proteins_20160902.aa.fasta|AA3_2|AA3_2 522 TPCCMTQSTAYMVAETAAGTLIEK 545 **************9999998876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (551 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 88.46 // Query: 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 [L=665] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-136 443.6 0.0 3.8e-136 443.4 0.0 1.1 1 AA3_2.hmm 3.2e-78 251.9 0.0 4.3e-78 251.5 0.0 1.0 1 AA3.hmm 1.3e-60 193.7 0.0 2e-60 193.1 0.0 1.2 1 AA3_3.hmm 6.5e-41 128.8 0.2 9.1e-16 45.8 0.0 3.2 3 AA3_1.hmm 3.3e-11 31.2 0.0 8.4e-06 13.4 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 443.4 0.0 3.8e-136 3.8e-136 2 567 .. 26 650 .. 25 651 .. 0.85 Alignments for each domain: == domain 1 score: 443.4 bits; conditional E-value: 3.8e-136 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsed.pnvsVlviEaGgdeen.... 40 s+D+++VG+GtAG +A+rL+ + + sVl++E G++ + 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 26 SFDFIVVGAGTAGGYLAHRLATSaYSPSVLLLETGPNTISnssk 69 8********************962678********987652111 PP AA3_2.hmm 41 .......dplidvpglag.sllgseldwnyttepqkglnnrsik 76 + + +pg++ ++ +++ +++ytt+pqk l++r++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 70 vkagenpNLFSLIPGNFAeNVAQQRTNYMYTTTPQKDLDDRVLV 113 111221223344454333244666******************** PP AA3_2.hmm 77 lprGkvlGGssaiNamlytrgskadydaWaellgnegWswdnll 120 ++rGk+lGG+s +N+m+++ g k+d+d+Wa++ g++ +s ++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 114 YHRGKGLGGTSMLNYMAWIKGYKGDFDEWAQQAGDTAYSSNEGW 157 ******************************************** PP AA3_2.hmm 121 pyfkksetftppdeeq.deanitydasvhgtsGplkvsfpeeas 163 + +k+ e+f p+ + e + ++++ hg+ Gp++ s p+++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 158 ERIKRLESFDPTGLPKcYERYAATKPADHGSFGPIHNSLPKNVL 201 ***********8666668888999******************** PP AA3_2.hmm 164 plskallealeelGvptnkdlnsgdalGvslvpstidpttgtRs 207 p +++++ee+G+p+ d n g+++G++lv+ +i + g R 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 202 PGIGTFIDGCEEVGIPKALDTNIGKNIGAGLVQMAIYK--GARV 243 **************************************..**** PP AA3_2.hmm 208 saatayldp.......vekrsnltvltnatvtkilfdstkkkat 244 s+at+ l++ +++ +nl+v +++v+kilfd++ a+ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 244 SSATQLLNDdgdigsgLRRPKNLEVRAETRVEKILFDRK--MAI 285 ********888887766789*******************..9** PP AA3_2.hmm 245 GVevtkkdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeL 288 GV+v+ g+ ++ a+kE+++saG i++P+lL+lSG+Gpk+eL 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 286 GVQVEG--GR--KYFANKEIVISAGFIDTPKLLLLSGVGPKDEL 325 ****88..65..799***************************** PP AA3_2.hmm 289 eklgIpvvvdlpgVGenLqDhllvpvsfevkepl..etldells 330 e+lgI+vv++ p+VG+nL Dh +v + +k++l +t ++l+s 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 326 EELGIKVVHNSPNVGKNLLDHSTVLLDPIFKQDLqlPTGNSLFS 369 ***********************99876666655449999**** PP AA3_2.hmm 331 dptvaaealaeylan...kt....Gpltssv.sevlafvklpei 366 dp++ + + +++l ++ G +t+ + s ++afvk++e 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 370 DPERVEFEKRKWLDGynnGKgegvGEMTRFGgSAAVAFVKFTEE 413 ******99999997433422344477776665788888885555 PP AA3_2.hmm 367 lskeeksnlasla.aqeelladedvpdlelvlvplalntaes.. 407 ++++ + ++l+ ++++ +d+d pd e++++ ++l+ ++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 414 -ERNQWPEWKALTdEERKRFLDKDRPDTEIFYLLGYLPPGKTip 456 .222222334444655666669**********999999988875 PP AA3_2.hmm 408 .paeg..knylsilvvllkplSrGsvklasadpldkplidpnyl 448 + ++y+ + ++ ++ lSrG+++l+s++p+d+plidp+y+ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 457 aG--SqpNSYARLFLLHQNHLSRGTISLRSTNPADPPLIDPQYF 498 42..23469*********************************** PP AA3_2.hmm 449 sdplDlevlvegvklarkiastkalkelvaeevapg........ 484 ++p+D+++ ve +k a ki++tkal++ v g 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 499 AHPYDVRIGVETIKQAVKIFKTKALSNTVIGMEFKGcaedppyi 542 ***************************87533332233333466 PP AA3_2.hmm 485 ......................aevq...sdeeleeyiresl.s 502 +de +e+++r++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 543 rdsaeveeenrakaeenggfyiN--GidmTDEGIEKWLRTKGlD 584 67766666666666666666542..04449*********98769 PP AA3_2.hmm 503 tvyHpvGTcamgpre.kggVVDselrVyGvknLRVvDaSvfPll 545 + yH +GTc+mg+ k VVDs+ rV Gv++LR++D+Sv+P++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 585 QGYHGMGTCRMGKAGdKLRVVDSKGRVVGVEGLRIADTSVIPVV 628 *************99999************************** PP AA3_2.hmm 546 vsahtqatvyavAekaAdlIke 567 ++ h+q +y vA +Ad I++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 629 MNNHPQVSAYLVADVVADGILR 650 ******************9986 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 251.5 0.0 4.3e-78 4.3e-78 80 402 .. 17 653 .. 11 662 .. 0.86 Alignments for each domain: == domain 1 score: 251.5 bits; conditional E-value: 4.3e-78 AA3.hmm 80 kfeitlskeeyDvvivGsGaaGsvlAsrLsea....gvlllEaG 119 + +++++ e++D+++vG+G+aG+ lA+rL+ + +vlllE G 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 17 NLTAAEMSESFDFIVVGAGTAGGYLAHRLATSayspSVLLLETG 60 567889*************************9************ PP AA3.hmm 120 eedlnee........kkliedevklds................. 138 ++ + + + 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 61 PNTISNSskvkagenP----------Nlfslipgnfaenvaqqr 94 9864433553333321..........022223333455556667 PP AA3.hmm 139 ......tepq..lngrriilprgkvlGGsslinamvylrgqaed 174 t+pq l++r + + rgk+lGG+s+ n+m +++g + d 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 95 tnymytTTPQkdLDDRVLVYHRGKGLGGTSMLNYMAWIKGYKGD 138 788999888899999999999*********************** PP AA3.hmm 175 fdawaee.g.egwswddllpyfkkaeell............... 201 fd+wa++ g +s ++ + k++e++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 139 FDEWAQQaGdTAYSSNEGWERIKRLESFDptglpkcyeryaatk 182 *******875668899999*******999999999998888888 PP AA3.hmm 202 ......................r..................... 202 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 183 padhgsfgpihnslpknvlpgiGtfidgceevgipkaldtnigk 226 87777777776666665555550555555666666666777777 PP AA3.hmm 203 ..............rrssaakayldplpa........pnleilt 224 +r s+a+ l+ + +nle++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 227 nigaglvqmaiykgARVSSATQLLNDDGDigsglrrpKNLEVRA 270 7888888888888988888888888744346899999******* PP AA3.hmm 225 narvtkilf...........ag.tlvaakeVilaaGaigspqlL 256 ++rv+kilf g +++a+ke++++aG i +p+lL 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 271 ETRVEKILFdrkmaigvqveGGrKYFANKEIVISAGFIDTPKLL 314 *********9999877665422456******************* PP AA3.hmm 257 llSgigpaee.eslgipvvvdlp.vgenlq.............. 284 llSg+gp++e e+lgi+vv++ p vg+nl 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 315 LLSGVGPKDElEELGIKVVHNSPnVGKNLLdhstvlldpifkqd 358 ******************************************** PP AA3.hmm 285 ............................................ 284 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 359 lqlptgnslfsdpervefekrkwldgynngkgegvgemtrfggs 402 ******************************************** PP AA3.hmm 285 ............................................ 284 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 403 aavafvkfteeernqwpewkaltdeerkrfldkdrpdteifyll 446 ******************************************** PP AA3.hmm 285 ..........................apks..svrlnssdpldp 300 + s ++ l+s++p+dp 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 447 gylppgktipagsqpnsyarlfllhqNHLSrgTISLRSTNPADP 490 ***********************976333378************ PP AA3.hmm 301 plidpnylsderdvellvegvr...................... 322 plidp+y++++ dv+ ve ++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 491 PLIDPQYFAHPYDVRIGVETIKqavkifktkalsntvigmefkg 534 **********988877777777777799999************* PP AA3.hmm 323 .............................eeetdd......... 328 + 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 535 caedppyirdsaeveeenrakaeenggfyI----Ngidmtdegi 574 ***999999888877766666665555551....0444555589 PP AA3.hmm 329 ...tree.iqtiyHpvGtcrmged.dasaVVdpnlrvhgvenLr 367 r + +yH +Gtcrmg+ d+ VVd+++rv gve+Lr 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 575 ekwLRTKgLDQGYHGMGTCRMGKAgDKLRVVDSKGRVVGVEGLR 618 999888889*************999999**************** PP AA3.hmm 368 vvDasvfPtilggnpnltivaiaeraadlikkdng 402 ++D sv+P +p+ +++ +a +ad i+ d+ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 619 IADTSVIPVVMNNHPQVSAYLVADVVADGILRDHA 653 ****************************9999875 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 193.1 0.0 2e-60 2e-60 3 587 .. 27 650 .. 25 652 .. 0.78 Alignments for each domain: == domain 1 score: 193.1 bits; conditional E-value: 2e-60 AA3_3.hmm 3 vDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddplvv 46 D i++G+Gtag+ a Rla+++ + +vll+e+G+n+ + + v 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 27 FDFIVVGAGTAGGYLAHRLATSAYSPSVLLLETGPNTISNSSKV 70 79*********************************987655433 PP AA3_3.hmm 47 ....kPalf.......lsnlkpesktalfykaekseeldgReli 79 +P lf +n ++++t +y+++++++ld+R l+ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 71 kageNPNLFslipgnfAEN-VAQQRTNYMYTTTPQKDLDDRVLV 113 1222566552221110333.3467788899999*********** PP AA3_3.hmm 80 vpaggvlGGGssinflmYtraqasDfdsw......kteGWsakd 117 g+ lGG s +n++ + ++ + Dfd+w +s+++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 114 YHRGKGLGGTSMLNYMAWIKGYKGDFDEWaqqagdT--AYSSNE 155 *****************************6555330..356666 PP AA3_3.hmm 118 llpllkkletyqgkg...........deevhGkeGPikvskGty 150 + +k+le++ +g + + hG+ GPi+ s + 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 156 GWERIKRLESFDPTGlpkcyeryaatKPADHGSFGPIHNSLPKN 199 666777766665544444444444446778************99 PP AA3_3.hmm 151 tskrveddfleaaeelgipevdDlqdletsngveralryvsrdG 194 + f+++ ee+gip+ D + ++ g+ ++ + +G 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 200 VLP-GIGTFIDGCEEVGIPKALDTNIGKNI-GAGLVQMAI-YKG 240 999.6789***************8765554.555544444.58* PP AA3_3.hmm 195 rRqDaAhaylhpklksg....kkpnLhvlveskvsrvlfenkra 234 R +A++ l + + g + +nL+v +e++v+++lf+ k a 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 241 ARVSSATQLLNDDGDIGsglrRPKNLEVRAETRVEKILFDRKMA 284 **********98766551122468******************** PP AA3_3.hmm 235 vgvelvpnkafqkeaksksrtvkarklvvvsaGalgtPlvLeRs 278 +gv+++ +++ a k +v+saG + tP++L s 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 285 IGVQVEGGRKYF-----------ANKEIVISAGFIDTPKLLLLS 317 ***998766554...........5689***************** PP AA3_3.hmm 279 GiGakevLekagvkvvvdlpgvGenyqDHklllv..pyraalep 320 G+G k+ Le++g+kvv + p vG+n+ DH ++l ++++ l+ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 318 GVGPKDELEELGIKVVHNSPNVGKNLLDHSTVLLdpIFKQDLQ- 360 *****************************99886335888864. PP AA3_3.hmm 321 setldallrgrkdveealk...........ekkgilgtngidvg 353 t ++l + + ve + + e+ g ++ g ++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 361 LPTGNSLFSDPERVEFEKRkwldgynngkgEGVGEMTRFGGSAA 404 45566666555544433334556999998877788888777777 PP AA3_3.hmm 354 vkl.RPteeevealgpeFkeawdrdfkn..kpdkplmllavvag 394 v + + teee + pe+k+ d++ k+ d+p + + ++ g 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 405 VAFvKFTEEER-NQWPEWKALTDEERKRflDKDRPDTEIFYLLG 447 66515566665.55699999999876653356789888888888 PP AA3_3.hmm 395 flgdpslv....pekkyltlsaftayPysrGsihitspdpeeei 434 +l +++ +++ y l+ + srG+i s++p++++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 448 YLPPGKTIpagsQPNSYARLFLLHQNHLSRGTISLRSTNPADPP 491 8877777766668899999999********************** PP AA3_3.hmm 435 dFetgflkdkaDlkklvwaYkkqReiaRRmdvyrg....ela.. 472 + ++ ++ D++ v + k+ i++ + + e++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 492 LIDPQYFAHPYDVRIGVETIKQAVKIFKTKALSNTvigmEFKgc 535 **************999999999999887554333111266522 PP AA3_3.hmm 473 aahPkfakgskaalveldaekkeskkkvedieYtaeDdaaiedw 516 a P++ ++s+ +e +k++++ i+ + d+ ie+w 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 536 AEDPPYIRDSAEVEEEN--RAKAEENGGFYINGIDMTDEGIEKW 577 56899*99996555444..556666666678888888999**** PP AA3_3.hmm 517 vren.vettWhslgtckmapr.ekggvvdkkLnvyGvegLkvaD 558 +r++ ++ +h +gtc+m+ +k vvd+k v GvegL++aD 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 578 LRTKgLDQGYHGMGTCRMGKAgDKLRVVDSKGRVVGVEGLRIAD 621 **7659************76516789****************** PP AA3_3.hmm 559 lsivPenvgantnstallvGekaadiilk 587 s++P + + +a+lv + ad il+ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 622 TSVIPVVMNNHPQVSAYLVADVVADGILR 650 *****999999999999999988887665 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.8 0.0 9.1e-16 9.1e-16 12 124 .. 22 142 .. 13 171 .. 0.72 2 ! 40.6 0.0 3.5e-14 3.5e-14 216 341 .. 263 373 .. 219 423 .. 0.82 3 ! 39.0 0.0 1.1e-13 1.1e-13 462 545 .. 568 649 .. 468 652 .. 0.88 Alignments for each domain: == domain 1 score: 45.8 bits; conditional E-value: 9.1e-16 AA3_1.hmm 12 vaketyDyivvGaGagGivvAdrLsea..gkkvLLlekGgpsty 53 +e++D+ivvGaG++G +A+rL+ + + +vLLle G p+t+ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 22 EMSESFDFIVVGAGTAGGYLAHRLATSaySPSVLLLETG-PNTI 64 56789*******************97622568*******.6666 PP AA3_1.hmm 54 atggtekpewlentnltrfDvpg.lcneiladssg..vactdta 94 + + k++ en nl +pg +++++++ ++ +++t ++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 65 SNSS--KVKAGENPNLFSL-IPGnFAENVAQQRTNymYTTTPQK 105 6555..5565557777665.899445555555444213333333 PP AA3_1.hmm 95 ........qmagcvlGGgtavNaglfvkpqasdfddkf 124 g+ lGG +++N++ ++k + dfd+ + 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 106 dlddrvlvYHRGKGLGGTSMLNYMAWIKGYKGDFDE-W 142 67788887789********************99984.3 PP == domain 2 score: 40.6 bits; conditional E-value: 3.5e-14 AA3_1.hmm 216 rsNfklilntkVkrvvrsggkvtGVevessgGqrevikvtkggr 259 +N + + +t+V+++ +++ GV+ve gG++ ++++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 263 PKNLEVRAETRVEKILFDRKMAIGVQVE--GGRKY----FANKE 300 47999***********************..66444....4679* PP AA3_1.hmm 260 VilsAGalsspkiLlrSGigpkdqlevvkasasdgvtliaksdw 303 +++sAG + +pk+Ll SG+gpkd+le + ++++++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 301 IVISAGFIDTPKLLLLSGVGPKDELEELG------IKVVHN--- 335 *************************8776......455555... PP AA3_1.hmm 304 inlpvGknlkdhpntdlkiktke.isaydfyealtspit 341 + +vGknl dh+ + l+ k+ ++ ++ +++p++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 336 -SPNVGKNLLDHSTVLLDPIFKQdLQLPTGNSLFSDPER 373 .368********999987555544776666666666655 PP == domain 3 score: 39.0 bits; conditional E-value: 1.1e-13 AA3_1.hmm 462 nttvedlvksllvsvakrsanHwmgtaklGtddsggtsvvDlnt 505 ++t+e + k l + + ++ H mgt+++G+ + ++ +vvD + 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 568 DMTDEGIEKWL-RTKGLDQGYHGMGTCRMGK-AGDKLRVVDSKG 609 55666666666.788999************6.59999******* PP AA3_1.hmm 506 kVyGtdNLfVvDASifpdlptgNpsaiimvaaekaaekil 545 +V+G++ L ++D S++p ++ p++ +a+ a il 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 610 RVVGVEGLRIADTSVIPVVMNNHPQVSAYLVADVVADGIL 649 *********************************9999998 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.3 0.0 0.019 0.019 3 39 .. 26 64 .. 24 113 .. 0.77 2 ! 13.4 0.0 8.4e-06 8.4e-06 226 317 .. 264 357 .. 240 384 .. 0.71 3 ! 11.7 0.0 2.7e-05 2.7e-05 468 521 .. 587 641 .. 572 651 .. 0.85 Alignments for each domain: == domain 1 score: 2.3 bits; conditional E-value: 0.019 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqds 39 ++d +++G+G G A+ l+ + +vl++e G ++ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 26 SFDFIVVGAGTAGGYLAHRLATsaYSPSVLLLETGPNTI 64 789******************9444567******98754 PP == domain 2 score: 13.4 bits; conditional E-value: 8.4e-06 AA3_4.hmm 226 ekfeLltetrctkleldeskekkieaaevkdLlknkdllvkakv 269 +++e+++etr++k+ d++ +a+ +++ ++ + k 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 264 KNLEVRAETRVEKILFDRK------MAIGVQVEGGRK-YFANKE 300 4788888888888877762......233333444444.467799 PP AA3_4.hmm 270 yviaaGavltpqiLanSgfgke.........keellpaLgkylt 304 +vi+aG + tp++L Sg+g + ++ p++gk+l 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 301 IVISAGFIDTPKLLLLSGVGPKdeleelgikVVHNSPNVGKNLL 344 9******************9977777777765566777788887 PP AA3_4.hmm 305 eqsmafcqvvLkk 317 ++s+++ + ++k+ 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 345 DHSTVLLDPIFKQ 357 7777665555555 PP == domain 3 score: 11.7 bits; conditional E-value: 2.7e-05 AA3_4.hmm 468 lhitGttragk.dketsvvdenskvwgfknLyvGGngvIptafa 510 h Gt r+gk ++ vvd++++v g++ L ++ +vIp + 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 587 YHGMGTCRMGKaGDKLRVVDSKGRVVGVEGLRIADTSVIPVVMN 630 6889*******658899***********************9999 PP AA3_4.hmm 511 aNPtlTsvafA 521 P + + +A 307571|Gyresc1_GeneCatalog_proteins_20160326.aa.fasta|AA3_2|AA3_2 631 NHPQVSAYLVA 641 99988777666 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (665 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 115.03 // Query: 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 [L=611] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.6e-132 429.2 0.0 8.7e-132 429.0 0.0 1.0 1 AA3_2.hmm 1.3e-69 223.5 0.0 1.6e-69 223.2 0.0 1.0 1 AA3.hmm 3.6e-59 188.9 0.0 3.4e-50 159.3 0.0 2.9 2 AA3_3.hmm 1.2e-38 121.3 0.0 1.2e-15 45.4 0.1 3.0 3 AA3_1.hmm 1.5e-09 25.7 0.0 3.8e-06 14.5 0.0 3.0 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 429.0 0.0 8.7e-132 8.7e-132 2 566 .. 8 598 .. 7 600 .. 0.87 Alignments for each domain: == domain 1 score: 429.0 bits; conditional E-value: 8.7e-132 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLse.dpnvsVlviEaGgdeen..... 40 +yD++iVG+G AG+ +A+rLs +p ++l++EaG+d + 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 8 HYDFIIVGAGPAGSYLAHRLSLaSPPPRILLLEAGPDTLSptpes 52 8********************956889********9875532222 PP AA3_2.hmm 41 .....dplidvpglagsllgs.eldwnyttepqkglnnrsiklpr 79 + ++ +pg++ + ++s +l+++y t+pqk lnnr++ ++r 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 53 pstnpNLKSLIPGMFIENVSSqRLNYMYLTTPQKDLNNRTLIYHR 97 2222234555666554333335*********************** PP AA3_2.hmm 80 GkvlGGssaiNamlytrgskadydaWaellgnegWswdnllpyfk 124 Gk+lGGssa+N+m+++ g +d+++Wae g++ ++ d+ + +k 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 98 GKGLGGSSALNYMAWVKGYLGDFQSWAEIAGDSAYGADEGWERIK 142 ********************************************* PP AA3_2.hmm 125 ksetftppdeeq.deanitydasvhgtsGplkvsfpeeasplska 168 + e+f p+ + + + ++ d + hg++G ++ s +++ p ka 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 143 RLENFDPNGPPEvFDEFVKPDLNNHGRKGVIHNSSGKRVVPGLKA 187 *******877766567789************************** PP AA3_2.hmm 169 llealeelGvptnkdlnsgdalGvslvpstidpttgtRssaatay 213 ++ea+e++G+ ++ d+nsg+++Gv+++++++ + g Rssaat+ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 188 FIEACEAVGIARTLDVNSGHPIGVGVAQHSVWK--GARSSAATQL 230 *********************************..********** PP AA3_2.hmm 214 ldp.......vekrsnltvltnatvtkilfdstkkkatGVevtkk 251 l+ +++r+nl v +++ v +ilfd++ +a GVe+++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 231 LNTpgdigagIKRRENLVVKVESKVVRILFDGK--TAVGVELKS- 272 **77888887899********************..9******99. PP AA3_2.hmm 252 dgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeLeklgIpvv 296 g+ +++a+kEVI+saG i++P+lL+lSG+Gpk+eLek+gI+v+ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 273 -GE--KYYASKEVIISAGFIDTPKLLLLSGVGPKQELEKIGIKVI 314 .65..689************************************* PP AA3_2.hmm 297 vdlpgVGenLqDhllvpvsfevkepl..etldellsdptvaaeal 339 ++ p+VG+nL Dh +++ +k++l +t ++l+ d+++++ + 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 315 HNSPNVGKNLLDHSTTVHDAIFKQDLeiPTGNSLFADSSRLEMEK 359 ****************9777777755449999************* PP AA3_2.hmm 340 aeylan.ktGpltssvsevlafvklpei.lskeeksnlasla... 379 +++l++ ++G+ + +se++ f + + + k s+ +s++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 360 ERWLSSyNNGAGE-GSSELVRFGASAGVaFLKYPLSERTSWPewn 403 ****973334333.3345555554444443333333333344444 PP AA3_2.hmm 380 ....aqeelladedvpdlelvlvplalntaes....paegknyls 416 +q+ l +d++ pd el++++++l++ +s +++ ++y+ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 404 llnaTQKALFLDPKRPDTELFYFTGWLPSGRSipegETP-NSYAR 447 66645666666***********99999999997543333.69*** PP AA3_2.hmm 417 ilvvllkplSrGsvklasadpldkplidpnylsdplDlevlvegv 461 i + ++ l rG+++las++p+d+p++dp+y+++p+D++++ve v 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 448 IFQLHQNQLARGEITLASKNPDDPPVVDPRYFEHPMDVRIAVETV 492 ********************************************* PP AA3_2.hmm 462 klarkiastkalkelvaeevapgaevqsdeeleeyiresl.stvy 505 k++ ki++ k k+l+ + g + +sd+ +e+++re + y 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 493 KVVLKIFRGKRYKNLN-GFYVNGLDDESDAGIERWLREGGlDQGY 536 **************98.6888899999***********7769*** PP AA3_2.hmm 506 HpvGTcamgpre.kggVVDselrVyGvknLRVvDaSvfPllvsah 549 H +GT +mg++ + VVDs ++ G k++R++D+Sv+P++++ h 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 537 HGMGTMRMGKEGdPLRVVDSGGKIVGLKRIRIADTSVVPVVMNNH 581 **********9999******************************* PP AA3_2.hmm 550 tqatvyavAekaAdlIk 566 q +y v+ + I+ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 582 AQVSAYLVGDVVGGKIL 598 *********98887776 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 223.2 0.0 1.6e-69 1.6e-69 87 390 .. 6 590 .. 2 602 .. 0.87 Alignments for each domain: == domain 1 score: 223.2 bits; conditional E-value: 1.6e-69 AA3.hmm 87 keeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlnee. 126 +++yD++ivG+G+aGs lA+rLs a ++lllEaG++ l + 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 6 ADHYDFIIVGAGPAGSYLAHRLSLAspppRILLLEAGPDTLSPTp 50 589************************9999*******9877666 PP AA3.hmm 127 .........kkliedevklds....................tepq 142 k s t+pq 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 51 espstnpnlK----------SlipgmfienvssqrlnymylTTPQ 85 6655543321..........0222223333445566788998899 PP AA3.hmm 143 ..lngrriilprgkvlGGsslinamvylrgqaedfdawaee.g.e 183 ln+r++i+ rgk+lGGss+ n+m +++g df++wae g 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 86 kdLNNRTLIYHRGKGLGGSSALNYMAWVKGYLGDFQSWAEIaGdS 130 99*************************************998655 PP AA3.hmm 184 gwswddllpyfkkaeell........................... 201 ++ d+ + k++e++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 131 AYGADEGWERIKRLENFDpngppevfdefvkpdlnnhgrkgvihn 175 58889999**********999999999888888888777777766 PP AA3.hmm 202 ..........r.................................. 202 + 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 176 ssgkrvvpglKafieaceavgiartldvnsghpigvgvaqhsvwk 220 666665555505555566666666677777777888888888999 PP AA3.hmm 203 .rrssaakayldp.lpa........pnleiltnarvtkilf.... 233 +rssaa+ l++ + +nl + +++v +ilf 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 221 gARSSAATQLLNTpG-DigagikrrENLVVKVESKVVRILFdgkt 264 99*********9944.45699*99*****************9877 PP AA3.hmm 234 .ag.......tlvaakeVilaaGaigspqlLllSgigpaee.esl 269 +g +++a+keVi++aG i +p+lLllSg+gp++e e+ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 265 aVGvelksgeKYYASKEVIISAGFIDTPKLLLLSGVGPKQElEKI 309 722555555457********************************* PP AA3.hmm 270 gipvvvdlp.vgenlq............................. 284 gi+v+++ p vg+nl 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 310 GIKVIHNSPnVGKNLLdhsttvhdaifkqdleiptgnslfadssr 354 ********************************************* PP AA3.hmm 285 ............................................. 284 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 355 lemekerwlssynngagegsselvrfgasagvaflkyplsertsw 399 ********************************************* PP AA3.hmm 285 ............................................. 284 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 400 pewnllnatqkalfldpkrpdtelfyftgwlpsgrsipegetpns 444 ********************************************* PP AA3.hmm 285 .......apks....svrlnssdpldpplidpnylsderdvellv 318 ++++ +++l+s++p dpp++dp+y++++ dv+ +v 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 445 yarifqlHQNQlargEITLASKNPDDPPVVDPRYFEHPMDVRIAV 489 ******955555688****************************** PP AA3.hmm 319 egvr......................eeetdd........tree. 332 e v+ + d+ re 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 490 ETVKvvlkifrgkryknlngfyvnglD---DEsdagierwLREGg 531 *******99999999999988866531...113448889988888 PP AA3.hmm 333 iqtiyHpvGtcrmged.dasaVVdpnlrvhgvenLrvvDasvfPt 376 +yH +Gt rmg+ d+ VVd+ ++ g + r++D sv+P 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 532 LDQGYHGMGTMRMGKEgDPLRVVDSGGKIVGLKRIRIADTSVVPV 576 999***********99*99************************** PP AA3.hmm 377 ilggnpnltivaia 390 + + +++ ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 577 VMNNHAQVSAYLVG 590 99999999999876 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 159.3 0.0 3.4e-50 3.4e-50 2 462 .. 8 500 .. 7 509 .. 0.80 2 ! 25.7 0.0 9.8e-10 9.8e-10 507 580 .. 517 592 .. 513 602 .. 0.88 Alignments for each domain: == domain 1 score: 159.3 bits; conditional E-value: 3.4e-50 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnld..... 41 +D ii+G+G ag+ a Rl+ a p ++ll+e+G+++l 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 8 HYDFIIVGAGPAGSYLAHRLSLASPPPRILLLEAGPDTLSptpes 52 69*********************************9986422222 PP AA3_3.hmm 42 ...dplv..vkPalflsnlkpesktalfykaekseeldgRelivp 81 +p++ P +f++n++ + + +y ++++++l++R+li 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 53 pstNPNLksLIPGMFIENVSSQ-RLNYMYLTTPQKDLNNRTLIYH 96 2223444225699999998765.566677788999********** PP AA3_3.hmm 82 aggvlGGGssinflmYtraqasDfdsw....kteGWsakdllpll 122 g+ lGG s++n++ + ++ Df+sw ++a++ + + 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 97 RGKGLGGSSALNYMAWVKGYLGDFQSWaeiaGDSAYGADEGWERI 141 ***************************74443456899******* PP AA3_3.hmm 123 kkletyqgkg...........deevhGkeGPikvskGtytskrve 156 k+le++ +g d + hG +G i+ s+G+ ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 142 KRLENFDPNGppevfdefvkpDLNNHGRKGVIHNSSGKRVVP-GL 185 ******9988777776677666789****************9.78 PP AA3_3.hmm 157 ddfleaaeelgipevdDlqdletsngveralryvsrdGrRqDaAh 201 + f+ea e++gi ++ D++ + gv a++ v +G R+ aA+ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 186 KAFIEACEAVGIARTLDVNSGHPI-GVGVAQHSV-WKGARSSAAT 228 99***************9987765.665555544.58******** PP AA3_3.hmm 202 aylhpklksg....kkpnLhvlveskvsrvlfenkravgvelvpn 242 + l + g +++nL v veskv+r+lf++k avgvel++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 229 QLLNTPGDIGagikRRENLVVKVESKVVRILFDGKTAVGVELKSG 273 ***98655431122689************************9876 PP AA3_3.hmm 243 kafqkeaksksrtvkarklvvvsaGalgtPlvLeRsGiGakevLe 287 +++ a k v++saG + tP++L sG+G k+ Le 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 274 EKY-----------YASKEVIISAGFIDTPKLLLLSGVGPKQELE 307 655...........46689************************** PP AA3_3.hmm 288 kagvkvvvdlpgvGenyqDHklllv..pyraalepsetldallrg 330 k+g+kv+ + p vG+n+ DH +++ ++++ le t ++l + 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 308 KIGIKVIHNSPNVGKNLLDHSTTVHdaIFKQDLEI-PTGNSLFAD 351 *********************99952268888653.455555444 PP AA3_3.hmm 331 rkdveealk...........ekkgilgtngidvgvkl..RPteee 362 ++ e + + e+++ l g +gv + P e 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 352 SSRLEMEKErwlssynngagEGSSELVRFGASAGVAFlkYPLSER 396 433333222334588888876666666666666554322366666 PP AA3_3.hmm 363 vealgpeFkeawdrdfknkpdkplmllavvagflgdpslv....p 403 + + + +a ++ p++p + l +++g+l +++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 397 TSWPEWNLLNATQKALFLDPKRPDTELFYFTGWLPSGRSIpegeT 441 666666777788888888999999999999999999888855546 PP AA3_3.hmm 404 ekkyltlsaftayPysrGsihitspdpeeeidFetgflkdkaDlk 448 ++ y +++ + +rG+i s++p++++ + ++++++D++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 442 PNSYARIFQLHQNQLARGEITLASKNPDDPPVVDPRYFEHPMDVR 486 6789999*************************************9 PP AA3_3.hmm 449 klvwaYkkqReiaR 462 v + k i+R 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 487 IAVETVKVVLKIFR 500 99888887777766 PP == domain 2 score: 25.7 bits; conditional E-value: 9.8e-10 AA3_3.hmm 507 aeDdaaiedwvre.nvettWhslgtckmaprek.ggvvdkkLnvy 549 +e da ie w+re ++ +h +gt++m+ + vvd+ ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 517 DESDAGIERWLREgGLDQGYHGMGTMRMGKEGDpLRVVDSGGKIV 561 6889********9459************87655579********* PP AA3_3.hmm 550 GvegLkvaDlsivPenvgantnstallvGek 580 G++++++aD s+vP + ++ +a+lvG+ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 562 GLKRIRIADTSVVPVVMNNHAQVSAYLVGDV 592 ***************9999999*******85 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 38.3 0.0 1.7e-13 1.7e-13 12 124 .. 4 123 .. 1 141 [. 0.80 2 ! 45.4 0.1 1.2e-15 1.2e-15 214 323 .. 242 335 .. 215 377 .. 0.84 3 ! 34.1 0.0 3.2e-12 3.2e-12 400 546 .. 449 599 .. 403 600 .. 0.83 Alignments for each domain: == domain 1 score: 38.3 bits; conditional E-value: 1.7e-13 AA3_1.hmm 12 vaketyDyivvGaGagGivvAdrLseag..kkvLLlekGgpstya 54 + +++yD+i+vGaG++G +A+rLs a+ ++LLle G+ ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 4 AGADHYDFIIVGAGPAGSYLAHRLSLASppPRILLLEAGPDTLSP 48 56789********************8873369*******998888 PP AA3_1.hmm 55 tggtekpewlentnltrfDvpglcneilad...ssgvactdta.. 94 t++ +p+ n nl +pg++ e +++ + +++t ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 49 TPE--SPST--NPNLKSL-IPGMFIENVSSqrlNYMYLTTPQKdl 88 888..5655..6677554.89965554444366555777766668 PP AA3_1.hmm 95 ......qmagcvlGGgtavNaglfvkpqasdfddkf 124 g+ lGG++a+N++ +vk df+ ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 89 nnrtliYHRGKGLGGSSALNYMAWVKGYLGDFQ-SW 123 788887789*****************9999984.44 PP == domain 2 score: 45.4 bits; conditional E-value: 1.2e-15 AA3_1.hmm 214 kkrsNfklilntkVkrvvrsggkvtGVevessgGqrevikvtkgg 258 k r+N + ++kV r+ g++++GVe++ +G++ +++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 242 KRRENLVVKVESKVVRILFDGKTAVGVELK--SGEKY----YASK 280 67999************************9..77554....4689 PP AA3_1.hmm 259 rVilsAGalsspkiLlrSGigpkdqlevvkasasdgvtliaksdw 303 +Vi+sAG + +pk+Ll SG+gpk++le + +++i++s 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 281 EVIISAGFIDTPKLLLLSGVGPKQELEKIG------IKVIHNS-- 317 **************************8776......5555554.. PP AA3_1.hmm 304 inlpvGknlkdhpntdlkik 323 +vGknl dh+ t ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 318 --PNVGKNLLDHSTTVHDAI 335 ..68********99876654 PP == domain 3 score: 34.1 bits; conditional E-value: 3.2e-12 AA3_1.hmm 400 vyltrgltSrGrleitakg..ntvvskkpylsdaeDkeavaqfie 442 ++l ++ +rG++++ +k + v + y+++++D + +++ ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 449 FQLHQNQLARGEITLASKNpdDPPVVDPRYFEHPMDVRIAVETVK 493 4567778899****999776688899999**************** PP AA3_1.hmm 443 nliaalsa..asgltlv.spasnttvedlvksllvsvakrsanHw 484 +++ ++ +++l+ + ++ +++ + l + + ++ H 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 494 VVLKIFRGkrYKNLNGFyVNGLDDESDAGIERWLREGGLDQGYHG 538 ****999877888885412334444555555555899******** PP AA3_1.hmm 485 mgtaklGtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNp 529 mgt ++G++ + +vvD k++G + + ++D S++p ++ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 539 MGTMRMGKE-GDPLRVVDSGGKIVGLKRIRIADTSVVPVVMNNHA 582 *******75.8889**************************88888 PP AA3_1.hmm 530 saiimvaaekaaekila 546 ++ +++ kil+ 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 583 QVSAYLVGDVVGGKILK 599 88889999999989886 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 5.3 0.0 0.0024 0.0024 3 37 .. 8 44 .. 6 62 .. 0.83 2 ! 14.5 0.0 3.8e-06 3.8e-06 256 319 .. 269 340 .. 225 369 .. 0.79 3 ? 2.0 0.0 0.023 0.023 468 507 .. 536 576 .. 528 586 .. 0.87 Alignments for each domain: == domain 1 score: 5.3 bits; conditional E-value: 0.0024 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaq 37 ++d +i+G+Gp G+ A+ l + ++l++e G 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 8 HYDFIIVGAGPAGSYLAHRLSLasPPPRILLLEAGPD 44 79***************99876446778999998864 PP == domain 2 score: 14.5 bits; conditional E-value: 3.8e-06 AA3_4.hmm 256 dLlknkdllvkakvyviaaGavltpqiLanSgfgke......... 291 +L++ ++ + k ++i+aG + tp++L Sg+g + 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 269 ELKSGEK-YYASKEVIISAGFIDTPKLLLLSGVGPKqelekigik 312 3444444.4567999******************998999999998 PP AA3_4.hmm 292 keellpaLgkylteqsmafcqvvLkkel 319 ++ p++gk+l ++s+++ + ++k++l 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 313 VIHNSPNVGKNLLDHSTTVHDAIFKQDL 340 66788999*********99999999886 PP == domain 3 score: 2.0 bits; conditional E-value: 0.023 AA3_4.hmm 468 lhitGttragkd.ketsvvdenskvwgfknLyvGGngvIpt 507 h Gt+r+gk+ + vvd+ +k+ g+k + ++ +v+p 542234|Wilmi1_GeneCatalog_proteins_20130716.aa.fasta|AA3_2|AA3_2 536 YHGMGTMRMGKEgDPLRVVDSGGKIVGLKRIRIADTSVVPV 576 5779*******636789*****************9999996 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (611 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02 # Mc/sec: 73.95 // Query: 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 [L=644] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.2e-136 443.2 0.0 4.7e-136 443.0 0.0 1.0 1 AA3_2.hmm 1.4e-76 246.4 0.0 1.7e-76 246.2 0.0 1.0 1 AA3.hmm 2.9e-53 169.4 0.0 9.2e-53 167.8 0.0 1.8 1 AA3_3.hmm 1.6e-41 130.8 0.0 1e-17 52.2 0.0 3.6 3 AA3_1.hmm 1.9e-11 32.0 0.0 6.7e-06 13.7 0.0 3.0 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 443.0 0.0 4.7e-136 4.7e-136 2 567 .. 4 614 .. 3 615 .. 0.86 Alignments for each domain: == domain 1 score: 443.0 bits; conditional E-value: 4.7e-136 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLse..dpnvsVlviEaGgdeen... 40 +yD++iVG+Gt+G +A++Ls +p +sVl++E G+d + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 4 TYDFIIVGSGTSGTYLAHKLSTlsSPPASVLLLESGPDTLSpkd 47 8********************9767889********99766542 PP AA3_2.hmm 41 ..dplidvpg.lagsllgseldwnyttepqkglnnrsiklprGk 81 + l +pg +++++ +++ +++y+t+pq+gl++r+++++rG+ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 48 paNLLPLIPGnFIENVASTRCNYQYKTAPQAGLGGRQLTYHRGR 91 2234445555233355666************************* PP AA3_2.hmm 82 vlGGssaiNamlytrgskadydaWaellg.negWswdnllpyfk 124 +lGG+s++N+m++ g ++++ +W+el+g ++ ++ + + +k 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 92 GLGGTSTLNYMAWLKGPRDQFAEWSELVGgDSAYGPTEAWKRIK 135 ****************************9899************ PP AA3_2.hmm 125 ksetftppdeeq.deanitydasvhgtsGplkvsfpeeasplsk 167 ++e+f + ++ + ++ d + hgtsG + +s+p++ + k 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 136 SIENFDNSGLSAeYDGIAKSDMKKHGTSGVIGISWPKNMIAGVK 179 *******87666345556799*********************** PP AA3_2.hmm 168 allealeelGvptnkdlnsgdalGvslvpstidpttgtRssaat 211 a++ea+ee+G+++n d+nsg+ lG++lv++++ + g R+saat 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 180 AFVEACEEAGIKRNLDINSGEVLGAGLVEQAVWK--GARTSAAT 221 **********************************..******** PP AA3_2.hmm 212 ayldp.......vekrsnltvltnatvtkilfdstkkkatGVev 248 +++ +++ +nltv+t+++v++ilfd++ katGV++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 222 MLINKegdlgagLKRSKNLTVVTDCQVDRILFDGK--KATGVQI 263 ***9888888767889*******************..9****** PP AA3_2.hmm 249 tkkdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeLeklg 292 + g +++ a+kEVI+s+G+i+sP+lL+lSG+Gpk+eLeklg 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 264 RG--G--HQYLASKEVIVSGGVIDSPKLLLLSGVGPKDELEKLG 303 98..5..5899********************************* PP AA3_2.hmm 293 IpvvvdlpgVGenLqDhllvpvsfevkepl..etldellsdptv 334 Ipvv+d p VG+n+ Dh ++ v + ++ +l +t ++l+s+p++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 304 IPVVHDSPYVGKNMIDHSTALVDVIFNPDLqiPTGNSLWSSPER 347 *****************9999777776654449999******** PP AA3_2.hmm 335 aaealaeylankt.......Gpltssv.sevlafvklpeilske 370 +++ + +l++ + G +t+ + s +++f+++++ l ++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 348 VEQEKKTWLESYQsgkgeavGEMTRFGsSAAVSFIRYSDSLRSS 391 *********98443333344666655546667777777765333 PP AA3_2.hmm 371 eksnlasla....aqeelladedvpdlelvlvplalntaes... 407 + + +++e +++ pd e++++ ++l+ ++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 392 WS-EW---SslssKEQERFLSPWRPDTEIFYFLGYLPPGNTipa 431 22.22...23335444444569*********9999999888765 PP AA3_2.hmm 408 .paegknylsilvvllkplSrGsvklasadpldkplidpnylsd 450 + + ++y+ + ++ ++ lSrGs++la adp+++p+idp+y+++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 432 gK-QPNSYARLFLLPQNQLSRGSITLADADPATPPVIDPKYFDH 474 32.2369************************************* PP AA3_2.hmm 451 plDlevlvegvklarkiastkalkelvaeevapg.......... 484 p+D++v+ve +k + ki++t+ + +v+ g 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 475 PMDVRVAVETIKHVLKIFKTNRYRGIVKGIEFHGcadlppyiae 518 **************************975555333444446777 PP AA3_2.hmm 485 ..........aev.qsdeeleeyiresl.stvyHpvGTcamgpr 516 + v ++de++e+++re+ + yH vGT +mg + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 519 gtegagkmyvKGVeETDEAIEKWLREKGlDQGYHGVGTMRMGGD 562 7777888775445479**********8779************99 PP AA3_2.hmm 517 e.kggVVDselrVyGvknLRVvDaSvfPllvsahtqatvyavAe 559 + V D++ rV G + LRVvD S +P+ ++ h+q t+y vA 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 563 GdPIRVTDTHGRVVGLQSLRVVDNSLVPVSLNNHPQVTAYLVAD 606 999***************************************** PP AA3_2.hmm 560 kaAdlIke 567 +Ad I+e 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 607 VVADRILE 614 ******97 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 246.2 0.0 1.7e-76 1.7e-76 86 417 .. 1 632 [. 1 642 [. 0.87 Alignments for each domain: == domain 1 score: 246.2 bits; conditional E-value: 1.7e-76 AA3.hmm 86 skeeyDvvivGsGaaGsvlAsrLsea.....gvlllEaGeedln 124 ++e+yD++ivGsG++G+ lA++Ls +vlllE G++ l 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 1 MAETYDFIIVGSGTSGTYLAHKLSTLssppaSVLLLESGPDTLS 44 679*********************99***99*********9877 PP AA3.hmm 125 ee..........kkliedevklds...............tepq. 142 + + t pq 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 45 PKdpanllplipG----------NfienvastrcnyqykTAPQa 78 5554333222221..........022233445566677888889 PP AA3.hmm 143 .lngrriilprgkvlGGsslinamvylrgqaedfdawaee.g.e 183 l+gr++++ rg++lGG+s+ n+m +l+g +++f +w+e+ g + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 79 gLGGRQLTYHRGRGLGGTSTLNYMAWLKGPRDQFAEWSELvGgD 122 9***************************************9545 PP AA3.hmm 184 g.wswddllpyfkkaeell......................... 201 + ++ ++ + k +e++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 123 SaYGPTEAWKRIKSIENFDnsglsaeydgiaksdmkkhgtsgvi 166 44666999999999**9999999999888888888877777777 PP AA3.hmm 202 ................r........................... 202 + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 167 giswpknmiagvkafvEaceeagikrnldinsgevlgaglveqa 210 77666666665555550555566666667777777777888888 PP AA3.hmm 203 ....rrssaakayldplpa........pnleiltnarvtkilf. 233 +r+saa+ +++ + +nl+++t+++v++ilf 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 211 vwkgARTSAATMLINKEGDlgaglkrsKNLTVVTDCQVDRILFd 254 888888888887777744456899999****************9 PP AA3.hmm 234 ....ag.......tlvaakeVilaaGaigspqlLllSgigpaee 266 +g ++ a+keVi+++G+i sp+lLllSg+gp++e 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 255 gkkaTGvqirgghQYLASKEVIVSGGVIDSPKLLLLSGVGPKDE 298 887722555556557***************************** PP AA3.hmm 267 .eslgipvvvdlp.vgenlq........................ 284 e+lgipvv+d p vg+n+ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 299 lEKLGIPVVHDSPyVGKNMIdhstalvdvifnpdlqiptgnslw 342 ******************************************** PP AA3.hmm 285 ............................................ 284 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 343 ssperveqekktwlesyqsgkgeavgemtrfgssaavsfirysd 386 ******************************************** PP AA3.hmm 285 ............................................ 284 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 387 slrsswsewsslsskeqerflspwrpdteifyflgylppgntip 430 ******************************************** PP AA3.hmm 285 ................apks..svrlnssdpldpplidpnylsd 310 ++ s s++l+++dp++pp+idp+y+++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 431 agkqpnsyarlfllpqNQLSrgSITLADADPATPPVIDPKYFDH 474 *************876555589********************** PP AA3.hmm 311 erdvellvegvr................................ 322 + dv+++ve ++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 475 PMDVRVAVETIKhvlkifktnryrgivkgiefhgcadlppyiae 518 **************************************999999 PP AA3.hmm 323 ............eee.tdd.....tree.iqtiyHpvGtcrmge 347 + e td+ re+ +yH vGt rmg 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 519 gtegagkmyvkgV-EeTDEaiekwLREKgLDQGYHGVGTMRMGG 561 9999988887542.224447889999999*************** PP AA3.hmm 348 d.dasaVVdpnlrvhgvenLrvvDasvfPtilggnpnltivaia 390 d d+ V d+++rv g + LrvvD+s +P +l +p+ t++ +a 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 562 DgDPIRVTDTHGRVVGLQSLRVVDNSLVPVSLNNHPQVTAYLVA 605 **999*************************************** PP AA3.hmm 391 eraadlikkdngkqlyerhvienyghk 417 +ad+i+++ ++r + +++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 606 DVVADRILEQWNTATKKRARSDSRSDN 632 *********988888777766555544 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 167.8 0.0 9.2e-53 9.2e-53 2 587 .. 4 614 .. 3 616 .. 0.79 Alignments for each domain: == domain 1 score: 167.8 bits; conditional E-value: 9.2e-53 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaea.dpnLkvllvegGknnl..dd 42 ++D ii+G+Gt+g a +l++ p +vll+e+G+++l +d 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 4 TYDFIIVGSGTSGTYLAHKLSTLsSPPASVLLLESGPDTLspKD 47 69******************9852799***********873356 PP AA3_3.hmm 43 plvvkPal...flsnlkpesktalfykaekseeldgRelivpag 83 p+ P++ f++n+ + yk+++++ l gR+l g 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 48 PANLLPLIpgnFIENVAS-TRCNYQYKTAPQAGLGGRQLTYHRG 90 666555542217777654.5667789999*************** PP AA3_3.hmm 84 gvlGGGssinflmYtraqasDfdsw.....kteGWsakdllpll 122 lGG s++n++ + ++ + f +w +++ + + + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 91 RGLGGTSTLNYMAWLKGPRDQFAEWselvgGDSAYGPTEAWKRI 134 *************************6555434567788899999 PP AA3_3.hmm 123 kkletyqgkg...........deevhGkeGPikvskGtytskrv 155 k +e++ ++g d+++hG++G i +s + + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 135 KSIENFDNSGlsaeydgiaksDMKKHGTSGVIGISWPKNMIA-G 177 999999877666666677777899************998888.7 PP AA3_3.hmm 156 eddfleaaeelgipevdDlqdletsngveralryvsrdGrRqDa 199 + f+ea ee+gi++ D++ e g+ + + v +G R a 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 178 VKAFVEACEEAGIKRNLDINSGEVL-GAGLVEQAV-WKGARTSA 219 899****************987655.666666666.47****** PP AA3_3.hmm 200 Ahaylhpklksg....kkpnLhvlveskvsrvlfenkravgvel 239 A++ + ++ + g + +nL+v+++ +v+r+lf++k+a+gv++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 220 ATMLINKEGDLGaglkRSKNLTVVTDCQVDRILFDGKKATGVQI 263 *****98765441122589***********************99 PP AA3_3.hmm 240 vpnkafqkeaksksrtvkarklvvvsaGalgtPlvLeRsGiGak 283 + ++ + a k v+vs+G + +P++L sG+G k 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 264 RGGHQ-----------YLASKEVIVSGGVIDSPKLLLLSGVGPK 296 86544...........456789********************** PP AA3_3.hmm 284 evLekagvkvvvdlpgvGenyqDHklllv..pyraalepsetld 325 + Lek+g++vv d p vG+n DH + lv +++ l + t + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 297 DELEKLGIPVVHDSPYVGKNMIDHSTALVdvIFNPDL-QIPTGN 339 ************************9988611455553.356788 PP AA3_3.hmm 326 allrgrkdveealk..................ekkgilgtngid 351 +l + + ve++ k + + + +i 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 340 SLWSSPERVEQEKKtwlesyqsgkgeavgemtRFGSSAAVSFIR 383 88888877777766778899999885554332223334445556 PP AA3_3.hmm 352 vgvklRPteeevealgpeFkeawdrdfknkpdkplmllavvagf 395 + lR + +e ++l ++ +e++ + ++ p + + ++ g+ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 384 YSDSLRSSWSEWSSLSSKEQERFLSPWR-----PDTEIFYFLGY 422 6666777777777777776666666554.....44444444444 PP AA3_3.hmm 396 lgdpslv....pekkyltlsaftayPysrGsihitspdpeeeid 435 l +++ +++ y l+ + srGsi ++dp++++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 423 LPPGNTIpagkQPNSYARLFLLPQNQLSRGSITLADADPATPPV 466 444444433338889999999999******************** PP AA3_3.hmm 436 FetgflkdkaDlkklvwaYkkqReiaRRmdvyrgelaaahPkfa 479 + ++++++D++ v + k+ i++ ++ yrg ++ + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 467 IDPKYFDHPMDVRVAVETIKHVLKIFK-TNRYRGIVKGIEFHGC 509 **********************99985.899***9998754434 PP AA3_3.hmm 480 kgskaalveldaekkeskkkvedieYtaeDdaaiedwvren.ve 522 ++ + + e ++ + ++ +e d+aie+w+re+ ++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 510 ADLPPYIAEG-----TEGAGKMYVKGVEETDEAIEKWLREKgLD 548 4444444443.....33333345666789999*******8659* PP AA3_3.hmm 523 ttWhslgtckmaprek.ggvvdkkLnvyGvegLkvaDlsivPen 565 +h +gt++m+ + v d++ v G++ L+v+D s+vP 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 549 QGYHGVGTMRMGGDGDpIRVTDTHGRVVGLQSLRVVDNSLVPVS 592 ***********9876647899*********************** PP AA3_3.hmm 566 vgantnstallvGekaadiilk 587 + + ta+lv + ad il+ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 593 LNNHPQVTAYLVADVVADRILE 614 ************9999987765 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.7 0.0 5e-13 5e-13 14 123 .. 2 114 .. 1 122 [. 0.84 2 ! 52.2 0.0 1e-17 1e-17 214 348 .. 235 356 .. 230 387 .. 0.81 3 ! 37.2 0.0 3.7e-13 3.7e-13 473 546 .. 517 614 .. 434 615 .. 0.71 Alignments for each domain: == domain 1 score: 36.7 bits; conditional E-value: 5e-13 AA3_1.hmm 14 ketyDyivvGaGagGivvAdrLs...eagkkvLLlekGgpstya 54 +etyD+i+vG+G++G +A++Ls +vLLle G+ ++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 2 AETYDFIIVGSGTSGTYLAHKLStlsSPPASVLLLESGPDTLSP 45 589******************983324457********988888 PP AA3_1.hmm 55 tggtekpewlentnltrfDvpglcneilad.ssgvactdtaqma 97 + ++ + ++ + ++ ++ + ++g+ ++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 46 KDPANLLPLIPGNFIENVASTRCNYQYKTApQAGLGGRQLTYHR 89 88889999999999998877775555555568889999999*** PP AA3_1.hmm 98 gcvlGGgtavNaglfvkpqasdfddk 123 g lGG +++N++ ++k ++ +f + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 90 GRGLGGTSTLNYMAWLKGPRDQFA-E 114 ******************998884.3 PP == domain 2 score: 52.2 bits; conditional E-value: 1e-17 AA3_1.hmm 214 kkrsNfklilntkVkrvvrsggkvtGVevessgGqrevikvtkg 257 k +N + +++++V+r+ g+k+tGV++ gG++ ++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 235 KRSKNLTVVTDCQVDRILFDGKKATGVQIR--GGHQYL----AS 272 5679*************************9..665544....68 PP AA3_1.hmm 258 grVilsAGalsspkiLlrSGigpkdqlevvkasasdgvtliaks 301 ++Vi+s+G++ spk+Ll SG+gpkd+le + + ++++s 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 273 KEVIVSGGVIDSPKLLLLSGVGPKDELEKLG------IPVVHDS 310 9**************************8776......5566666 PP AA3_1.hmm 302 dwinlpvGknlkdhpntdlkiktke.isaydfyealtspit..e 342 vGkn+ dh+ +++ + ++ ++ ++sp++ + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 311 P----YVGKNMIDHSTALVDVIFNPdLQIPTGNSLWSSPERveQ 350 5....58*******999998766555999999999999987544 PP AA3_1.hmm 343 dkdlyl 348 +k+ +l 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 351 EKKTWL 356 444444 PP == domain 3 score: 37.2 bits; conditional E-value: 3.7e-13 AA3_1.hmm 473 l.........................vsvakrsanHwmgtaklG 491 + + ++ H +gt ++G 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 517 AegtegagkmyvkgveetdeaiekwlREKGLDQGYHGVGTMRMG 560 4444455555555555555555555589999************* PP AA3_1.hmm 492 tddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNpsaiimv 535 d + +v D+ +V+G + L VvD S++p p+++ 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 561 GD-GDPIRVTDTHGRVVGLQSLRVVDNSLVPVSLNNHPQVTAYL 603 76.9999**************************9********** PP AA3_1.hmm 536 aaekaaekila 546 +a+ a +il 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 604 VADVVADRILE 614 *********97 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 3.9 0.0 0.0062 0.0062 3 36 .. 4 40 .. 2 62 .. 0.87 2 ! 13.7 0.0 6.7e-06 6.7e-06 210 320 .. 215 334 .. 207 362 .. 0.70 3 ! 10.8 0.0 5.1e-05 5.1e-05 468 530 .. 551 614 .. 539 616 .. 0.89 Alignments for each domain: == domain 1 score: 3.9 bits; conditional E-value: 0.0062 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd...aglkvlmveiGa 36 ++d +i+GSG G A++l + ++vl++e G 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 4 TYDFIIVGSGTSGTYLAHKLSTlssPPASVLLLESGP 40 79*****************998877788999999886 PP == domain 2 score: 13.7 bits; conditional E-value: 6.7e-06 AA3_4.hmm 210 aatilgdklsekkk.......kkekfeLltetrctkleldeske 246 a t ++l +k+ ++++++++t+ +++++ d + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 215 ARTSAATMLINKEGdlgaglkRSKNLTVVTDCQVDRILFDGK-- 256 555555544443334455554556889999999999988773.. PP AA3_4.hmm 247 kkieaaevkdLlknkdllvkakvyviaaGavltpqiLanSgfgk 290 k + ++++ + + k +++++G + +p++L Sg+g 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 257 -KATGVQIRG---G-HQYLASKEVIVSGGVIDSPKLLLLSGVGP 295 .445666553...3.345788999******************99 PP AA3_4.hmm 291 e.........keellpaLgkylteqsmafcqvvLkkelv 320 + + p +gk++ ++s+a+ +v+++ +l 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 296 KdeleklgipVVHDSPYVGKNMIDHSTALVDVIFNPDLQ 334 888988888866778889***************998873 PP == domain 3 score: 10.8 bits; conditional E-value: 5.1e-05 AA3_4.hmm 468 lhitGttragkd.ketsvvdenskvwgfknLyvGGngvIptafa 510 h Gt+r+g d + v d++++v g++ L v n+ +p + 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 551 YHGVGTMRMGGDgDPIRVTDTHGRVVGLQSLRVVDNSLVPVSLN 594 5778*****99647789*************************** PP AA3_4.hmm 511 aNPtlTsvafAikgaekive 530 P +T+ +A a++i e 681523|Geocar1_GeneCatalog_proteins_20180620.aa.fasta|AA3_2|AA3_2 595 NHPQVTAYLVADVVADRILE 614 ********999888888876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (644 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02 # Mc/sec: 65.74 // Query: 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 [L=661] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.1e-141 459.2 0.0 7e-141 459.0 0.0 1.0 1 AA3_2.hmm 4.3e-80 258.1 0.0 5.2e-80 257.8 0.0 1.0 1 AA3.hmm 2.5e-65 209.3 0.0 4.4e-65 208.4 0.0 1.5 1 AA3_3.hmm 7.7e-45 141.7 0.3 1.3e-17 51.9 0.0 3.4 3 AA3_1.hmm 1e-10 29.6 0.0 1.5e-05 12.6 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 459.0 0.0 7e-141 7e-141 2 567 .. 27 650 .. 26 651 .. 0.85 Alignments for each domain: == domain 1 score: 459.0 bits; conditional E-value: 7e-141 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLse.dpnvsVlviEaGgdeend.. 41 +yDY+i+G+GtAG +A+rLs d++ sVl++E G++ ++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 27 NYDYIIIGAGTAGGYLAHRLSTaDNKKSVLLLETGPNTLSSsg 69 8********************967889*********9877334 PP AA3_2.hmm 42 .plidvpglagsl........lgseldwnyttepqkglnnrsi 75 ++i++p+l++ + +s+ ++ y+ +pq++l+nr++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 70 pNEIKNPNLFSLVpgnfvenvAQSRTNYLYSIAPQAALENRVL 112 588998887775533333333566******************* PP AA3_2.hmm 76 klprGkvlGGssaiNamlytrgskadydaWaellgnegWswdn 118 +++rGk+lGG+saiN+m+++ g k+dyd+Wa+ +++ +s + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 113 TYHRGKGLGGTSAINFMAWVKGYKGDYDEWAQIANDSAFSGAE 155 ******************************************* PP AA3_2.hmm 119 llpyfkksetftppdeeq.deanitydasvhgtsGplkvsfpe 160 + +k+ e+f p + + + d s hg+sGp++ + p+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 156 GWERIKRLENFDPSGLPAsYSRYAAPDLSNHGNSGPIHNGLPK 198 *************6544436778889***************** PP AA3_2.hmm 161 easplskallealeelGvptnkdlnsgdalGvslvpstidptt 203 + p + +++++ e+Gvp++ d+nsg+++Gv++++ +i + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 199 NPIPGLTTFIDGCVEAGVPKSLDINSGKNIGVGIAQMAIYK-- 239 *****************************************.. PP AA3_2.hmm 204 gtRssaatayldp.......vekrsnltvltnatvtkilfdst 239 g R+s+at+ l++ ++k +nl++++n++v+k++fd+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 240 GARASSATQCLNSkgdlgagLRKSPNLDIMVNTRVEKVIFDGL 282 ************88888876789******************** PP AA3_2.hmm 240 kkkatGVevtkkdgkkytvkarkEVILsaGainsPqlLmlSGi 282 ka GV+v g+ t++a++EVI+saG+i+sP+lL+lSG+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 283 --KAVGVQVVG--GR--TYRAKREVIISAGVIDSPKLLLLSGV 319 ..9******99..65..899*********************** PP AA3_2.hmm 283 GpkeeLeklgIpvvvdlpgVGenLqDhllvpvsfevkepl..e 323 Gpk++Le+l+I+v++d p+VG+++ Dh+++ + +k+++ + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 320 GPKKDLEALNITVISDSPNVGKHMLDHTTILLDPIFKQDFrvP 362 *******************************887777765559 PP AA3_2.hmm 324 tldellsdptvaaealaeylanktGpltssvsevlafvklpei 366 t ++++++p + ++ ++++++ ++ l + +e++ f ++i 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 363 TGNSFWRNPDHVLWEKEKWINTYNSSLGEGKGEMTLFGGSSAI 405 999*****************99555555444555555444444 PP AA3_2.hmm 367 ....lskeeksnlasla......aqeella.dedvpdlelvlv 398 +++ee + +++ ++e++ + d+d pd e++++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 406 afikFTPEERE---QWPewkalkEEERARFlDPDRPDTEIFYF 445 43334555553...333333554333333369**********9 PP AA3_2.hmm 399 plalntaes...paeg..knylsilvvllkplSrGsvklasad 436 ++l+ ++ + ++y+ + ++ ++ lSrG+++l++++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 446 LGYLPPGKTvpaG--SepNSYARLFLLQQNNLSRGTISLKTSN 486 9999988887542..23479*********************** PP AA3_2.hmm 437 pldkplidpnylsdplDlevlvegvklarkiastkalkelv.. 477 p+++pli+p+y+s+p+D++++ve vk + ki++tk+l++l 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 487 PAEEPLINPQYFSHPYDVRIAVETVKATVKIFKTKSLSALFig 529 ***************************************8523 PP AA3_2.hmm 478 .....aeevapg........................aevq... 488 a+e + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 530 mefvgATEDP-PfirdnpeqeeknlekaklsggfyiN--Giel 569 3333222222.24777777777777666666665542..0445 PP AA3_2.hmm 489 sdeeleeyiresl.stvyHpvGTcamgpre.kggVVDselrVy 529 +d+ +e+++r++ + yH +GTc+mg + ++ VVDs rV 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 570 TDAGIEKWLRKKGlGQGYHGMGTCRMGAASdPMRVVDSGGRVV 612 9*********98779************9999************ PP AA3_2.hmm 530 GvknLRVvDaSvfPllvsahtqatvyavAekaAdlIke 567 Gvk+LRV+D+Sv+P++++ h+q +y vA +Ad I++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 613 GVKGLRVADTSVIPVVMNNHPQVSAYLVADVVADSIIN 650 ************************************87 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 257.8 0.0 5.2e-80 5.2e-80 84 404 .. 22 655 .. 17 660 .. 0.85 Alignments for each domain: == domain 1 score: 257.8 bits; conditional E-value: 5.2e-80 AA3.hmm 84 tlskeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeed 122 +++ ++yD++i+G+G+aG+ lA+rLs a +vlllE G++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 22 PDRRTNYDYIIIGAGTAGGYLAHRLSTAdnkkSVLLLETGPNT 64 567899************************9999*******98 PP AA3.hmm 123 lnee.....kklied........evklds.............. 138 l k + + + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 65 LSSSgpneiK----NpnlfslvpG----Nfvenvaqsrtnyly 99 7766744430....3322222330....134445556666777 PP AA3.hmm 139 .tepq..lngrriilprgkvlGGsslinamvylrgqaedfdaw 178 pq l++r +++ rgk+lGG+s+in+m +++g + d+d+w 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 100 sIAPQaaLENRVLTYHRGKGLGGTSAINFMAWVKGYKGDYDEW 142 7555578************************************ PP AA3.hmm 179 aee.g.egwswddllpyfkkaeell.................. 201 a+ + s ++ + k++e++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 143 AQIaNdSAFSGAEGWERIKRLENFDpsglpasysryaapdlsn 185 ***743446667778999****999999999999888888887 PP AA3.hmm 202 ...................r....................... 202 + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 186 hgnsgpihnglpknpipglTtfidgcveagvpksldinsgkni 228 7777777666666655555055555666666666777777778 PP AA3.hmm 203 ............rrssaakayldplpa........pnleiltn 225 +r s+a+ l++ + pnl+i+ n 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 229 gvgiaqmaiykgARASSATQCLNSKGDlgaglrksPNLDIMVN 271 8888888888897777777777763333578889********* PP AA3.hmm 226 arvtkilf..........ag.tl.vaakeVilaaGaigspqlL 256 +rv+k++f +g ++ +a++eVi++aG+i sp+lL 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 272 TRVEKVIFdglkavgvqvVGgRTyRAKREVIISAGVIDSPKLL 314 ********9988866555226455******************* PP AA3.hmm 257 llSgigpaee.eslgipvvvdlp.vgenlq............. 284 llSg+gp+++ e+l+i+v+ d p vg+++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 315 LLSGVGPKKDlEALNITVISDSPnVGKHMLdhttilldpifkq 357 ******************************************* PP AA3.hmm 285 ........................................... 284 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 358 dfrvptgnsfwrnpdhvlwekekwintynsslgegkgemtlfg 400 ******************************************* PP AA3.hmm 285 ........................................... 284 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 401 gssaiafikftpeereqwpewkalkeeerarfldpdrpdteif 443 ******************************************* PP AA3.hmm 285 .............................apks....svrlns 294 + + ++ l++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 444 yflgylppgktvpagsepnsyarlfllqqN--NlsrgTISLKT 484 **************************9553..45588****** PP AA3.hmm 295 sdpldpplidpnylsderdvellvegvr............... 322 s+p++ pli+p+y+s++ dv+ +ve v+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 485 SNPAEEPLINPQYFSHPYDVRIAVETVKatvkifktkslsalf 527 *****************9*********99999*********** PP AA3.hmm 323 ....................................eeetdd. 328 + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 528 igmefvgatedppfirdnpeqeeknlekaklsggfyI----Ng 566 *********9999999887766655555555555551....05 PP AA3.hmm 329 ...........tree.iqtiyHpvGtcrmged.dasaVVdpnl 358 r++ + +yH +Gtcrmg d++ VVd+ + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 567 ieltdagiekwLRKKgLGQGYHGMGTCRMGAAsDPMRVVDSGG 609 5555569999988889**************99*********** PP AA3.hmm 359 rvhgvenLrvvDasvfPtilggnpnltivaiaeraadlikkdn 401 rv gv++Lrv+D sv+P +p+ +++ +a +ad i++d 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 610 RVVGVKGLRVADTSVIPVVMNNHPQVSAYLVADVVADSIINDS 652 ****************************************998 PP AA3.hmm 402 gkq 404 + + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 653 RSE 655 765 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 208.4 0.0 4.4e-65 4.4e-65 2 588 .. 27 651 .. 26 652 .. 0.81 Alignments for each domain: == domain 1 score: 208.4 bits; conditional E-value: 4.4e-65 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnldd.. 42 ++D ii+G+Gtag+ a Rl++ad++ +vll+e+G+n+l + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 27 NYDYIIIGAGTAGGYLAHRLSTADNKKSVLLLETGPNTLSSsg 69 79*********************************99765422 PP AA3_3.hmm 43 .plvvkPalf.......lsnlkpesktalfykaekseeldgRe 77 +++ +P lf ++n ++s+t +y+ ++++ l++R 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 70 pNEIKNPNLFslvpgnfVEN-VAQSRTNYLYSIAPQAALENRV 111 25788887763221110333.357899999999********** PP AA3_3.hmm 78 livpaggvlGGGssinflmYtraqasDfdsw....kteGWsak 116 l g+ lGG s+inf+ + ++ + D+d+w + +s+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 112 LTYHRGKGLGGTSAINFMAWVKGYKGDYDEWaqiaNDSAFSGA 154 *******************************887766788999 PP AA3_3.hmm 117 dllpllkkletyqgkg...........deevhGkeGPikvskG 148 + + +k+le++ +g d + hG++GPi+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 155 EGWERIKRLENFDPSGlpasysryaapDLSNHGNSGPIHNGLP 197 9999999999998777766666666777899*******98777 PP AA3_3.hmm 149 tytskrveddfleaaeelgipevdDlqdletsngveralryvs 191 + + + f+++ e+g+p++ D++ ++ gv a+ + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 198 KNPIP-GLTTFIDGCVEAGVPKSLDINSGKNI-GVGIAQMAI- 237 77777.6789****************998887.666555444. PP AA3_3.hmm 192 rdGrRqDaAhaylhpklksg....kkpnLhvlveskvsrvlfe 230 +G R +A++ l +k + g k pnL ++v+++v++v+f+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 238 YKGARASSATQCLNSKGDLGaglrKSPNLDIMVNTRVEKVIFD 280 48************997755223369***************** PP AA3_3.hmm 231 nkravgvelvpnkafqkeaksksrtvkarklvvvsaGalgtPl 273 + +avgv++v rt++a++ v++saG + +P+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 281 GLKAVGVQVVG-----------GRTYRAKREVIISAGVIDSPK 312 *******9975...........467899*************** PP AA3_3.hmm 274 vLeRsGiGakevLekagvkvvvdlpgvGenyqDHklllv..py 314 +L sG+G k+ Le ++++v++d p vG++ DH+++l ++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 313 LLLLSGVGPKKDLEALNITVISDSPNVGKHMLDHTTILLdpIF 355 ***********************************98863357 PP AA3_3.hmm 315 raalepsetldallrgrkdveealk...........ekkgilg 346 ++ t +++ r+ ++v + + e+kg ++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 356 KQD-FRVPTGNSFWRNPDHVLWEKEkwintynsslgEGKGEMT 397 777.456788888888765543333344577788885555554 PP AA3_3.hmm 347 t...ngidvgvklRPteeevealgpeFkeawdrdfknkpdkpl 386 + + +k+ P e e ++ ke+ f pd+p 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 398 LfggSSAIAFIKFTPEEREQWPEWKALKEEERARFL-DPDRPD 439 410034445567777777665545555555444554.699**9 PP AA3_3.hmm 387 mllavvagflgdpslv....pekkyltlsaftayPysrGsihi 425 + + ++ g+l ++v +++ y l+ + srG+i 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 440 TEIFYFLGYLPPGKTVpagsEPNSYARLFLLQQNNLSRGTISL 482 999999999887777766778999******************* PP AA3_3.hmm 426 tspdpeeeidFetgflkdkaDlkklvwaYkkqReiaRRmd... 465 + ++p+ee+ + +++++ D++ v + k + i++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 483 KTSNPAEEPLINPQYFSHPYDVRIAVETVKATVKIFKTKSlsa 525 *********************************9998754122 PP AA3_3.hmm 466 vyrg.el..aaahPkfakgskaalveldaekkeskkkvedieY 505 ++ g e+ a+ P+f ++ + + ++ ek++ + i+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 526 LFIGmEFvgATEDPPFIRDNPEQEEKN-LEKAKLSGG-FYING 566 5776455334678***99988776655.455554444.45666 PP AA3_3.hmm 506 taeDdaaiedwvren.vettWhslgtckmaprek.ggvvdkkL 546 + da ie+w+r++ + +h +gtc+m++ + vvd+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 567 IELTDAGIEKWLRKKgLGQGYHGMGTCRMGAASDpMRVVDSGG 609 677799******9865999**********98766499****** PP AA3_3.hmm 547 nvyGvegLkvaDlsivPenvgantnstallvGekaadiilke 588 v Gv+gL+vaD s++P + + +a+lv + ad i+++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 610 RVVGVKGLRVADTSVIPVVMNNHPQVSAYLVADVVADSIIND 651 *****************9999999999****99999888765 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 51.9 0.0 1.3e-17 1.3e-17 10 124 .. 21 142 .. 13 168 .. 0.71 2 ! 46.7 0.0 4.9e-16 4.9e-16 187 350 .. 227 384 .. 216 428 .. 0.77 3 ! 39.3 0.1 8.5e-14 8.5e-14 473 546 .. 553 650 .. 460 652 .. 0.70 Alignments for each domain: == domain 1 score: 51.9 bits; conditional E-value: 1.3e-17 AA3_1.hmm 10 tpvaketyDyivvGaGagGivvAdrLs..eagkkvLLlekGgp 50 p ++++yDyi++GaG++G +A+rLs + +k+vLLle G+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 21 IPDRRTNYDYIIIGAGTAGGYLAHRLStaDNKKSVLLLETGPN 63 4567789********************4445789*******66 PP AA3_1.hmm 51 styatggtekpewlentnltrfDvpg.lcneiladssgvactd 92 ++ ++g + ++n nl vpg +++++++ ++ + 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 64 TLSSSGPN----EIKNPNLFSL-VPGnFVENVAQSRTN-YLYS 100 65555554....3455666554.777333444443222.2211 PP AA3_1.hmm 93 ta...........qmagcvlGGgtavNaglfvkpqasdfddkf 124 +a g+ lGG +a+N + +vk + d+d ++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 101 IApqaalenrvltYHRGKGLGGTSAINFMAWVKGYKGDYD-EW 142 1112246666677789***********************8.45 PP == domain 2 score: 46.7 bits; conditional E-value: 4.9e-16 AA3_1.hmm 187 nkvyghppfmisngerggPlatYLps.....A..kkrsNfkli 222 n g ++++i +g r++++++ L+s A +k +N +++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 227 NIGVGIAQMAIYKGARASSATQCLNSkgdlgAglRKSPNLDIM 269 55566777888888888888888876333331336889***** PP AA3_1.hmm 223 lntkVkrvvrsggkvtGVevessgGqrevikvtkggrVilsAG 265 nt+V++v+ g k++GV+v gG ++ ++ +Vi+sAG 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 270 VNTRVEKVIFDGLKAVGVQVV--GG----RTYRAKREVIISAG 306 ********************9..55....33446789****** PP AA3_1.hmm 266 alsspkiLlrSGigpkdqlevvkasasdgvtliaksdwinlpv 308 ++ spk+Ll SG+gpk+ le ++ +t+i++s +v 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 307 VIDSPKLLLLSGVGPKKDLEALN------ITVISDS----PNV 339 *******************9999......5666664....689 PP AA3_1.hmm 309 Gknlkdhpntdlkiktke.isaydfyealtspit..edkdlyl 348 Gk++ dh+ + l+ k+ + ++ + +p++ +k++++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 340 GKHMLDHTTILLDPIFKQdFRVPTGNSFWRNPDHvlWEKEKWI 382 *******999998655555888888888888877554555555 PP AA3_1.hmm 349 nq 350 n 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 383 NT 384 54 PP == domain 3 score: 39.3 bits; conditional E-value: 8.5e-14 AA3_1.hmm 473 l.........................vsvakrsanHwmgtakl 490 l + + ++ H mgt+++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 553 LekaklsggfyingieltdagiekwlRKKGLGQGYHGMGTCRM 595 055555555555555555555555557888899********** PP AA3_1.hmm 491 GtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNpsaii 533 G +s+ +vvD +V+G++ L V+D S++p ++ p++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 596 GA-ASDPMRVVDSGGRVVGVKGLRVADTSVIPVVMNNHPQVSA 637 *6.5*************************************** PP AA3_1.hmm 534 mvaaekaaekila 546 +a+ a i++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 638 YLVADVVADSIIN 650 ********99986 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 4.8 0.0 0.0034 0.0034 3 44 .. 27 70 .. 25 110 .. 0.78 2 ! 8.6 0.0 0.00024 0.00024 224 317 .. 262 357 .. 240 386 .. 0.70 3 ! 12.6 0.0 1.5e-05 1.5e-05 465 530 .. 584 650 .. 573 652 .. 0.90 Alignments for each domain: == domain 1 score: 4.8 bits; conditional E-value: 0.0034 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqdskvige 44 ++d +i+G+G G A+ l ++ +vl++e G ++ + g 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 27 NYDYIIIGAGTAGGYLAHRLSTadNKKSVLLLETGPNTLSSSGP 70 6899***************988557788*******987665554 PP == domain 2 score: 8.6 bits; conditional E-value: 0.00024 AA3_4.hmm 224 kkekfeLltetrctkleldeskekkieaaevkdLlknkdllvk 266 k+++++++ +tr++k+ d +a+ v+ + +++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 262 KSPNLDIMVNTRVEKVIFDG-----LKAVGVQVVG-GRTY-RA 297 45577888888888887776.....3344443332.3333.33 PP AA3_4.hmm 267 akvyviaaGavltpqiLanSgfgke.........keellpaLg 300 + ++i+aG + +p++L Sg+g + + p++g 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 298 KREVIISAGVIDSPKLLLLSGVGPKkdlealnitVISDSPNVG 340 456899****************998777777776455667888 PP AA3_4.hmm 301 kylteqsmafcqvvLkk 317 k++ ++++ + + ++k+ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 341 KHMLDHTTILLDPIFKQ 357 88888877666555555 PP == domain 3 score: 12.6 bits; conditional E-value: 1.5e-05 AA3_4.hmm 465 glalhitGttragk.dketsvvdenskvwgfknLyvGGngvIp 506 g h Gt r+g ++ vvd+ ++v g+k L v+ +vIp 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 584 GQGYHGMGTCRMGAaSDPMRVVDSGGRVVGVKGLRVADTSVIP 626 5667999*******778899*********************** PP AA3_4.hmm 507 tafaaNPtlTsvafAikgaekive 530 + P + + +A a++i++ 667459|Tubin1_1_GeneCatalog_proteins_20190713.aa.fasta|AA3_2|AA3_2 627 VVMNNHPQVSAYLVADVVADSIIN 650 *******99999999888888876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (661 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 70.44 // Query: 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 [L=654] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.2e-137 447.4 0.0 2.6e-137 447.2 0.0 1.0 1 AA3_2.hmm 2.8e-77 248.8 0.0 3.5e-77 248.5 0.0 1.0 1 AA3.hmm 5.7e-65 208.1 0.0 1.6e-64 206.6 0.0 2.0 1 AA3_3.hmm 5.6e-46 145.5 0.6 2.2e-18 54.4 0.0 3.4 3 AA3_1.hmm 3.6e-09 24.5 0.0 0.00017 9.1 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 447.2 0.0 2.6e-137 2.6e-137 2 567 .. 27 651 .. 26 652 .. 0.86 Alignments for each domain: == domain 1 score: 447.2 bits; conditional E-value: 2.6e-137 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLse.dpnvsVlviEaGgdeend... 41 +yDY+i+G+GtAG +A+rLs d++ sVl++E G++ ++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTaDSKKSVLLLETGPNTLSSggi 70 7********************97899*********998773334 PP AA3_2.hmm 42 plidvpglagsl........lgseldwnyttepqkglnnrsikl 77 +++++p+l++ + +s+ ++ yt +pq++l+nr++++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 71 NEMENPNLFSLVpgnfvenvAQSRTNYLYTIAPQAELENRVLTY 114 77777776664422333333666********************* PP AA3_2.hmm 78 prGkvlGGssaiNamlytrgskadydaWaellgnegWswdnllp 121 +rGk+lGG+s+iN+m+++ g k+dyd+Wa+ + ++s + + 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 115 HRGKGLGGTSTINYMAWVKGYKGDYDEWAHIADDAEFSGTEGWE 158 ******************************************** PP AA3_2.hmm 122 yfkksetftppdeeq.deanitydasvhgtsGplkvsfpeeasp 164 +k+ e+f p+ + + + d s hg+sG ++ s p++ p 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 159 RIKQLESFDPTGLPAsYSRYAVPDLSNHGNSGTIHNSLPKNPIP 202 **********7544436667779********************* PP AA3_2.hmm 165 lskallealeelGvptnkdlnsgdalGvslvpstidpttgtRss 208 + +++++ e+G+p++ d+nsg+++Gv++++ +i + g R s 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 203 GLATFIDGCIEAGIPKSLDINSGKNIGVGIAQMAIFK--GARVS 244 *************************************..***** PP AA3_2.hmm 209 aatayldp.......vekrsnltvltnatvtkilfdstkkkatG 245 +at+ l++ ++k+snl++ +++ v++++f++ ka G 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 245 SATQCLNSegdlgagLRKQSNLHIKVETKVERVIFEGL--KAVG 286 *******88888877799*******************9..9*** PP AA3_2.hmm 246 VevtkkdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeLe 289 V+v g+ ++a++EVI+saG i+sP+lL+lSGiGpke+Le 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 287 VQVVG--GR--IYRAKREVIISAGFIDSPKLLLLSGIGPKEDLE 326 ***99..66..789****************************** PP AA3_2.hmm 290 klgIpvvvdlpgVGenLqDhllvpvsfevkepl..etldellsd 331 l+I+vv+d p+VG+n+ Dh ++ + +k++l +t ++++++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 327 ILNIKVVSDSPNVGKNMLDHSTILLDPIFKQDLqvPTSNSFWQE 370 *********************9997766665443499999**** PP AA3_2.hmm 332 ptvaaealaeylan.......ktGpltssv.sevlafvklpeil 367 p + ++ +++ + + G +t+ + s+++af+k+ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 371 PDHVLWEKYKWAHSynsgageGMGEMTRFGgSSAIAFIKF---- 410 ***********99855555433366666555788888884.... PP AA3_2.hmm 368 skeeksnlasla.......aqeella.dedvpdlelvlvplaln 403 ++ee + +++ +++ + d+d pd e++++ ++ + 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 411 TPEERE---QWPewealttEERAR-FlDPDRPDTEIFYFLGYRP 450 444442...233222443433334.359**********877666 PP AA3_2.hmm 404 taes...paegknylsilvvllkplSrGsvklasadpldkplid 444 + +e+++y+ + ++ ++ lSrGs++l+sadp+++plid 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 451 PGKVipmGSEQNSYARLFLLQQNNLSRGSISLKSADPAEQPLID 494 5555876444579******************************* PP AA3_2.hmm 445 pnylsdplDlevlvegvklarkiastkalkelv.......aeev 481 p+y+s+p+D++++ve+vk a ki++tkal+++ a+e 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 495 PRYFSHPYDVRIAVEAVKAAVKIFKTKALSACFvgmefvgATED 538 ******************************97423333332222 PP AA3_2.hmm 482 apg..........................aevqsdeeleeyire 499 p+ ++++d+e+e+++r+ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 539 -PPfirdcpereeknhekgkltggfytngIDLTDDAEIEKWLRK 581 .22477777788888888999999998777899**********9 PP AA3_2.hmm 500 sl.stvyHpvGTcamgpre.kggVVDselrVyGvknLRVvDaSv 541 + + yH +GTc+mg + VVDs rV Gv++LRV+D+Sv 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 582 KGlGQGYHGMGTCRMGAAGdPLRVVDSGGRVVGVEGLRVADTSV 625 8779************99999*********************** PP AA3_2.hmm 542 fPllvsahtqatvyavAekaAdlIke 567 +P++++ h+q +y vA +Ad I++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 626 IPVVMNNHPQVSAYLVADVIADSILR 651 ************************86 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 248.5 0.0 3.5e-77 3.5e-77 86 400 .. 24 652 .. 19 653 .. 0.86 Alignments for each domain: == domain 1 score: 248.5 bits; conditional E-value: 3.5e-77 AA3.hmm 86 skeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlne 125 e+yD++i+G+G+aG+ lA+rLs a +vlllE G++ l 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 24 LREDYDYIIIGAGTAGGYLAHRLSTAdskkSVLLLETGPNTLSS 67 6799************************9999******997664 PP AA3.hmm 126 e.......kklied......evklds...............tep 141 + + + + p 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 68 GginemenP----NlfslvpG----NfvenvaqsrtnylytIAP 103 476533321....12222331....1344455566677887445 PP AA3.hmm 142 q..lngrriilprgkvlGGsslinamvylrgqaedfdawaee.g 182 q l++r +++ rgk+lGG+s+in+m +++g + d+d+wa+ + 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 104 QaeLENRVLTYHRGKGLGGTSTINYMAWVKGYKGDYDEWAHIaD 147 567*************************************9974 PP AA3.hmm 183 .egwswddllpyfkkaeell........................ 201 + s ++ + k++e++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 148 dAEFSGTEGWERIKQLESFDptglpasysryavpdlsnhgnsgt 191 34466677778899999998999999988888888887777777 PP AA3.hmm 202 .............r.............................. 202 + 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 192 ihnslpknpipglAtfidgcieagipksldinsgknigvgiaqm 235 76666666555550555556666666667777777788888888 PP AA3.hmm 203 .....rrssaakayldplpa........pnleiltnarvtkilf 233 +r s+a+ l++ + +nl+i +++v++++f 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 236 aifkgARVSSATQCLNSEGDlgaglrkqSNLHIKVETKVERVIF 279 8888966777777766633335789999**************** PP AA3.hmm 234 ...........agtl.vaakeVilaaGaigspqlLllSgigpae 265 g++ +a++eVi++aG i sp+lLllSgigp+e 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 280 eglkavgvqvvGGRIyRAKREVIISAGFIDSPKLLLLSGIGPKE 323 8888766555333677**************************** PP AA3.hmm 266 e.eslgipvvvdlp.vgenlq....................... 284 + e l+i+vv d p vg+n+ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 324 DlEILNIKVVSDSPnVGKNMLdhstilldpifkqdlqvptsnsf 367 ******************************************** PP AA3.hmm 285 ............................................ 284 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 368 wqepdhvlwekykwahsynsgagegmgemtrfggssaiafikft 411 ******************************************** PP AA3.hmm 285 ............................................ 284 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 412 peereqwpewealtteerarfldpdrpdteifyflgyrppgkvi 455 ******************************************** PP AA3.hmm 285 .................apks....svrlnssdpldpplidpny 307 + + s+ l+s+dp+++plidp+y 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 456 pmgseqnsyarlfllqqN--NlsrgSISLKSADPAEQPLIDPRY 497 **************9553..45588******************* PP AA3.hmm 308 lsderdvellvegvr............................. 322 +s++ dv+ +ve+v+ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 498 FSHPYDVRIAVEAVKaavkifktkalsacfvgmefvgatedppf 541 ****9**********9999************************* PP AA3.hmm 323 .........................eee.tdd......tree.i 333 + tdd r++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 542 irdcpereeknhekgkltggfytngI-DlTDDaeiekwLRKKgL 584 *9999998888888888887776442.1333368899988899* PP AA3.hmm 334 qtiyHpvGtcrmged.dasaVVdpnlrvhgvenLrvvDasvfPt 376 + +yH +Gtcrmg d+ VVd+ +rv gve+Lrv+D sv+P 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 585 GQGYHGMGTCRMGAAgDPLRVVDSGGRVVGVEGLRVADTSVIPV 628 *************99*99************************** PP AA3.hmm 377 ilggnpnltivaiaeraadlikkd 400 +p+ +++ +a +ad i+ d 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 629 VMNNHPQVSAYLVADVIADSILRD 652 *******************99865 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 206.6 0.0 1.6e-64 1.6e-64 2 588 .. 27 652 .. 26 653 .. 0.79 Alignments for each domain: == domain 1 score: 206.6 bits; conditional E-value: 1.6e-64 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnldd... 42 ++D ii+G+Gtag+ a Rl++ad + +vll+e+G+n+l + 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTADSKKSVLLLETGPNTLSSggi 70 79********************************9997654111 PP AA3_3.hmm 43 plvvk.......PalflsnlkpesktalfykaekseeldgReli 79 +++ + P f++n+ ++s+t +y+ ++++el++R l 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 71 NEMENpnlfslvPGNFVENV-AQSRTNYLYTIAPQAELENRVLT 113 34445000002255556665.46788888899999********* PP AA3_3.hmm 80 vpaggvlGGGssinflmYtraqasDfdsw..........kteGW 113 g+ lGG s+in++ + ++ + D+d+w teGW 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 114 YHRGKGLGGTSTINYMAWVKGYKGDYDEWahiaddaefsGTEGW 157 *****************************888865555555566 PP AA3_3.hmm 114 sakdllpllkkletyqgkg...........deevhGkeGPikvs 146 + +k+le++ +g d + hG++G i+ s 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 158 ER------IKQLESFDPTGlpasysryavpDLSNHGNSGTIHNS 195 55......55555444444333333334778899********** PP AA3_3.hmm 147 kGtytskrveddfleaaeelgipevdDlqdletsngveralryv 190 + + f+++ e+gip++ D++ ++ gv a+ + 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 196 LPKNPIP-GLATFIDGCIEAGIPKSLDINSGKNI-GVGIAQMAI 237 **99999.6789****************998887.666555444 PP AA3_3.hmm 191 srdGrRqDaAhaylhpklksg....kkpnLhvlveskvsrvlfe 230 +G R +A++ l ++ + g k+ nLh+ ve+kv+rv+fe 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 238 -FKGARVSSATQCLNSEGDLGaglrKQSNLHIKVETKVERVIFE 280 .58***********99866542233699**************** PP AA3_3.hmm 231 nkravgvelvpnkafqkeaksksrtvkarklvvvsaGalgtPlv 274 + +avgv++v r+++a++ v++saG + +P++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 281 GLKAVGVQVVG-----------GRIYRAKREVIISAGFIDSPKL 313 *******9975...........46899***************** PP AA3_3.hmm 275 LeRsGiGakevLekagvkvvvdlpgvGenyqDHklllv..pyra 316 L sGiG ke Le +++kvv+d p vG+n DH ++l ++++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 314 LLLSGIGPKEDLEILNIKVVSDSPNVGKNMLDHSTILLdpIFKQ 357 *********************************99886436888 PP AA3_3.hmm 317 alepsetldallrgr.kdveealk.............ekkgilg 346 l+ t +++ + + e+ k + ++ g 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 358 DLQVP-TSNSFWQEPdHVLWEKYKwahsynsgagegmGEMTRFG 400 87644.44444444314444555566667788885543444455 PP AA3_3.hmm 347 tngidvgvklRPteeevealgpeFkeawdrdfknkpdkplmlla 390 + + +k+ P e e ++ + f pd+p + + 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 401 GSSAIAFIKFTPEEREQWPEWEALTTEERARF-LDPDRPDTEIF 443 55555677888877765433333333333334.47999999999 PP AA3_3.hmm 391 vvagflgdpslv....pekkyltlsaftayPysrGsihitspdp 430 ++ g+ +++ +++ y l+ + srGsi +s+dp 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 444 YFLGYRPPGKVIpmgsEQNSYARLFLLQQNNLSRGSISLKSADP 487 988887655555666688899999999***************** PP AA3_3.hmm 431 eeeidFetgflkdkaDlkklvwaYkkqReiaRR...mdvyrg.e 470 +e++ + +++++ D++ v a k i++ ++ g e 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 488 AEQPLIDPRYFSHPYDVRIAVEAVKAAVKIFKTkalSACFVGmE 531 ***************************99998722245788755 PP AA3_3.hmm 471 l..aaahPkfakgskaalveldaekkeskkkvedieYtaeDdaa 512 + a+ P+f ++ + + ++ +ek + + + + Dda 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 532 FvgATEDPPFIRDCPEREEKN-HEKGKLTGGFYTNGIDLTDDAE 574 5334678******99988877.688888888888888889**** PP AA3_3.hmm 513 iedwvren.vettWhslgtckmaprek.ggvvdkkLnvyGvegL 554 ie+w+r++ + +h +gtc+m++ + vvd+ v GvegL 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 575 IEKWLRKKgLGQGYHGMGTCRMGAAGDpLRVVDSGGRVVGVEGL 618 *****9865999**********98766489************** PP AA3_3.hmm 555 kvaDlsivPenvgantnstallvGekaadiilke 588 +vaD s++P + + +a+lv + ad il++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 619 RVADTSVIPVVMNNHPQVSAYLVADVIADSILRD 652 *********9999999999**9999999888776 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 54.4 0.0 2.2e-18 2.2e-18 12 124 .. 23 142 .. 14 160 .. 0.76 2 ! 50.1 0.0 4.6e-17 4.6e-17 214 348 .. 261 380 .. 219 411 .. 0.81 3 ! 37.4 0.0 3.2e-13 3.2e-13 468 545 .. 575 650 .. 459 652 .. 0.86 Alignments for each domain: == domain 1 score: 54.4 bits; conditional E-value: 2.2e-18 AA3_1.hmm 12 vaketyDyivvGaGagGivvAdrLs..eagkkvLLlekGgpsty 53 +e yDyi++GaG++G +A+rLs +++k+vLLle G p+t 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 23 HLREDYDYIIIGAGTAGGYLAHRLStaDSKKSVLLLETG-PNTL 65 55689*******************9667789********.9999 PP AA3_1.hmm 54 atggtekpewlentnltrfDvpg.lcneiladssg.vac.tdta 94 ++gg +++e n nl vpg +++++++ ++ +++ + +a 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 66 SSGGINEME---NPNLFSL-VPGnFVENVAQSRTNyLYTiAPQA 105 9***76665...5666554.788444555544333222212222 PP AA3_1.hmm 95 ........qmagcvlGGgtavNaglfvkpqasdfddkf 124 g+ lGG +++N++ +vk + d+d ++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 106 elenrvltYHRGKGLGGTSTINYMAWVKGYKGDYD-EW 142 57777777789***********************8.44 PP == domain 2 score: 50.1 bits; conditional E-value: 4.6e-17 AA3_1.hmm 214 kkrsNfklilntkVkrvvrsggkvtGVevessgGqrevikvt.k 256 +k+sN +++ +tkV+rv+ +g k++GV+v gG ++ + 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 261 RKQSNLHIKVETKVERVIFEGLKAVGVQVV--GG-----RIYrA 297 5899*************************9..55.....23326 PP AA3_1.hmm 257 ggrVilsAGalsspkiLlrSGigpkdqlevvkasasdgvtliak 300 + +Vi+sAG + spk+Ll SGigpk+ le+++ + +++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 298 KREVIISAGFIDSPKLLLLSGIGPKEDLEILNIKV------VSD 335 789*****************************433......444 PP AA3_1.hmm 301 sdwinlpvGknlkdhpntdlkiktke.isaydfyealtspited 343 + +vGkn+ dh+ + l+ k+ ++ ++ +++p++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 336 ----SPNVGKNMLDHSTILLDPIFKQdLQVPTSNSFWQEPDHVL 375 ....468**********999866666599999999999999877 PP AA3_1.hmm 344 kdlyl 348 ++y 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 376 WEKYK 380 77774 PP == domain 3 score: 37.4 bits; conditional E-value: 3.2e-13 AA3_1.hmm 468 lvksllvsvakrsanHwmgtaklGtddsggtsvvDlntkVyGtd 511 + ++ l + + ++ H mgt+++G + + +vvD +V+G++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 575 I-EKWLRKKGLGQGYHGMGTCRMGA-AGDPLRVVDSGGRVVGVE 616 3.33337888899***********6.58999************* PP AA3_1.hmm 512 NLfVvDASifpdlptgNpsaiimvaaekaaekil 545 L V+D S++p ++ p++ +a+ +a il 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 617 GLRVADTSVIPVVMNNHPQVSAYLVADVIADSIL 650 *******************************998 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 3.2 0.0 0.0099 0.0099 3 39 .. 27 65 .. 25 96 .. 0.85 2 ! 8.5 0.0 0.00025 0.00025 246 319 .. 271 359 .. 244 387 .. 0.72 3 ! 9.1 0.0 0.00017 0.00017 465 528 .. 585 649 .. 578 653 .. 0.85 Alignments for each domain: == domain 1 score: 3.2 bits; conditional E-value: 0.0099 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqds 39 ++d +i+G+G G A+ l ++ +vl++e G ++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 27 DYDYIIIGAGTAGGYLAHRLSTadSKKSVLLLETGPNTL 65 6899****************88546788******98754 PP == domain 2 score: 8.5 bits; conditional E-value: 0.00025 AA3_4.hmm 246 ekkieaaevkdLlk......nkdllvkakvyviaaGavltpqiL 283 e+k+e ++ + L++ +++ + ++i+aG + +p++L 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 271 ETKVERVIFEGLKAvgvqvvGGRIYRAKREVIISAGFIDSPKLL 314 345666666666664433222244555667899*********** PP AA3_4.hmm 284 anSgfgke.........keellpaLgkylteqsmafcqvvLkke 318 Sg+g + + p++gk++ ++s+ + + ++k++ 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 315 LLSGIGPKedleilnikVVSDSPNVGKNMLDHSTILLDPIFKQD 358 *****999899999888567789999999999998888888877 PP AA3_4.hmm 319 l 319 l 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 359 L 359 6 PP == domain 3 score: 9.1 bits; conditional E-value: 0.00017 AA3_4.hmm 465 glalhitGttragk.dketsvvdenskvwgfknLyvGGngvIpt 507 g h Gt r+g + vvd+ ++v g++ L v+ +vIp 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 585 GQGYHGMGTCRMGAaGDPLRVVDSGGRVVGVEGLRVADTSVIPV 628 5667899*******657889************************ PP AA3_4.hmm 508 afaaNPtlTsvafAikgaeki 528 + P + + +A a++i 1812748|Chove1_GeneCatalog_proteins_20131210.aa.fasta|AA3_2|AA3_2 629 VMNNHPQVSAYLVADVIADSI 649 999999998888776666666 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (654 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 67.88 // Query: UJR18652.1|AA3_2 [L=505] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.8e-119 387.7 0.0 1.2e-76 246.9 0.0 2.8 2 AA3_2.hmm 2.3e-83 268.9 0.0 2.6e-83 268.7 0.0 1.0 1 AA3.hmm 5.6e-54 171.8 0.3 1.3e-34 107.9 0.0 4.0 3 AA3_3.hmm 5.5e-47 148.8 0.0 2.1e-33 104.0 0.0 2.1 2 AA3_1.hmm 6.2e-13 36.9 0.0 2.4e-06 15.2 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 246.9 0.0 1.2e-76 1.2e-76 3 318 .. 5 302 .. 3 319 .. 0.90 2 ! 136.8 0.0 2.8e-43 2.8e-43 411 568 .] 340 503 .. 319 503 .. 0.92 Alignments for each domain: == domain 1 score: 246.9 bits; conditional E-value: 1.2e-76 AA3_2.hmm 3 yDYviVGGGtAGlvvAsrLsedpnvsVlviEaGgdeendplidvpglagsl.lgseldwnyttepqkglnnrsiklprGkvlGGssaiNamly 94 yDY+i+G+GtAG+++A +Ls++p+ +Vl+iE G + +p++++ +++ s+ ++ ++ +y ++ q+g + rsi++pr+k+ GG+ ++N+m++ UJR18652.1|AA3_2 5 YDYIIIGAGTAGSILARKLSDNPQNKVLLIEEGYWLSLNPQVQNASQWYSIrFDPLIERGYVSTLQAGFGYRSIPIPRAKGTGGTNSMNGMVF 97 **********************************************999996888999*********************************** PP AA3_2.hmm 95 trgskadyda.WaellgnegWswdnllpyfkksetftppdeeqdeanitydasvhgtsGplkvsfpeeasplskallealeelGvptnkdlns 186 + g+++d+d+ W +gWsw++l y k++++ p+ pl+ ++pl ++l++++ e G+++n+++n+ UJR18652.1|AA3_2 98 IIGNRKDFDErWGPI---NGWSWNDLSSYWKSIQKTISPS-------------------PLD-----PKHPLIQKLIKSATENGYKYNRNPND 163 ********987*976...67******************95...................455.....3458999**************99988 PP AA3_2.hmm 187 .......gdalGvslvpstidpttgtRssaatayldpvekrsnltvltnatvtkilfdstkkkatGVevtk.kdgkkytvkarkEVILsaGai 271 g ++ + i+++ +R s+ +ay++p+ r+nl++l+ ++vtkilfd++ + +GV+ + +++ + ++ rkE+ILsaG++ UJR18652.1|AA3_2 164 ldskqgqGGVSTRIHMAKKISDNYAERMSSWNAYIQPILPRKNLDILVFTQVTKILFDKS-LRSIGVTTYNiGKKEYIYFYSRKEIILSAGVF 255 6554333222334568888888899***********************************.7*******996555667899************ PP AA3_2.hmm 272 nsPqlLmlSGiGpkeeLeklgIpvvvdlpgVGenLqDhllvpvsfev 318 ++P+lL+lSGiGp +eL k++I++++d pgVG+nLqDh+++ ++ + UJR18652.1|AA3_2 256 DTPKLLLLSGIGPCNELIKHNIKCLADVPGVGKNLQDHTFLELHSTP 302 ****************************************9877654 PP == domain 2 score: 136.8 bits; conditional E-value: 2.8e-43 AA3_2.hmm 411 gknylsilvvllkplSrGsvklasadpldkplidpnylsdplDlevlvegvklarkiastkalkelvaeeva...pgaevqsdeeleeyires 500 g ++i v +++ +SrGs++l ++p++kp+i+pn+ls+++D++ +++v++ark++ +k+++el+++ ++ p+ +++++++l ++i+e+ UJR18652.1|AA3_2 340 GIYKIQIFVETFHYTSRGSITLFDKNPFSKPIINPNFLSNSYDINKTLHSVQVARKFLLSKSISELIEKFNKfniPSFHINDEKKLLQWIKEN 432 55568899999*******************************************************9866665558899************** PP AA3_2.hmm 501 lstvyHpvGTcamgpre...kggVVDselrVyGvknLRVvDaSvfPllvsahtqatvyavAekaAdlIked 568 +++ +Hp++Tc+mg++ + VV+++l+V+ +k LR++D S++P l+s++++ ++ +++kaA++I+ed UJR18652.1|AA3_2 433 IKSDAHPSSTCSMGNNFqdnHMIVVNPRLKVRHTKQLRIADGSIIPYLISGNPNQITMIIGMKAAEMILED 503 **************875667999*********************************************986 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 268.7 0.0 2.6e-83 2.6e-83 86 401 .. 1 504 [. 1 505 [] 0.85 Alignments for each domain: == domain 1 score: 268.7 bits; conditional E-value: 2.6e-83 AA3.hmm 86 skeeyDvvivGsGaaGsvlAsrLsea...gvlllEaGeedlneekklied..e.vkl..ds.......tepq..lngrriilprgkvlGGssl 161 ++++yD++i+G+G+aGs+lA++Ls + +vll+E+G + + ++++++ + +++ d+ ++ q ++ r+i +pr+k+ GG+ + UJR18652.1|AA3_2 1 MNNCYDYIIIGAGTAGSILARKLSDNpqnKVLLIEEGYWLSL--NPQVQNasQwYSIrfDPliergyvSTLQagFGYRSIPIPRAKGTGGTNS 91 689*************************999******77533..222333443222243337777888444469******************* PP AA3.hmm 162 inamvylrgqaedfdawaeegegwswddllpyfkkaeell..............................r...................... 202 +n+mv++ g+++dfd+++ gwsw+dl y k +++ + + UJR18652.1|AA3_2 92 MNGMVFIIGNRKDFDERWGPINGWSWNDLSSYWKSIQKTIspspldpkhpliqkliksatengykynrnpNdldskqgqggvstrihmakkis 184 **************998866347**************99999999998888888777777766666655505555666666777777778888 PP AA3.hmm 203 ....rrssaakayldp.lpapnleiltnarvtkilf.........ag........tl.vaakeVilaaGaigspqlLllSgigpaee.eslgi 271 r+s+ +ay++p lp++nl+il ++vtkilf ++ + +++ke+il+aG++ +p+lLllSgigp++e +++i UJR18652.1|AA3_2 185 dnyaERMSSWNAYIQPiLPRKNLDILVFTQVTKILFdkslrsigvTTynigkkeyIYfYSRKEIILSAGVFDTPKLLLLSGIGPCNElIKHNI 277 8899************8889****************9988886651144555555366*********************************** PP AA3.hmm 272 pvvvdlp.vgenlq............................................................apks..svrlnssdpldpp 301 ++++d+p vg+nlq + +s s++l +++p+ +p UJR18652.1|AA3_2 278 KCLADVPgVGKNLQdhtflelhstplrnqnislpknifgtwgviaieengeyyhglqigeingiykiqifvetfHYTSrgSITLFDKNPFSKP 370 *************************************************************************9556668************* PP AA3.hmm 302 lidpnylsderdvellvegvr...........................eeetdd......treeiqtiyHpvGtcrmged...dasaVVdpnl 358 i+pn+ls+ d+ ++++ v+ d+ ++e+i++ +Hp+ tc+mg++ +++ VV+p+l UJR18652.1|AA3_2 371 IINPNFLSNSYDINKTLHSVQvarkfllsksiseliekfnkfnipsfhI--NDEkkllqwIKENIKSDAHPSSTCSMGNNfqdNHMIVVNPRL 461 *******997677666666666667777777777777777777644321..3336789999999**************99*99999******* PP AA3.hmm 359 rvhgvenLrvvDasvfPtilggnpnltivaiaeraadlikkdn 401 +v+++++Lr++D+s++P ++gnpn ++ i+ +aa++i++dn UJR18652.1|AA3_2 462 KVRHTKQLRIADGSIIPYLISGNPNQITMIIGMKAAEMILEDN 504 *****************************************98 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 107.9 0.0 1.3e-34 1.3e-34 3 310 .. 5 296 .. 3 310 .. 0.85 2 ! 7.2 0.0 0.0004 0.0004 408 460 .. 344 396 .. 333 403 .. 0.87 3 ! 47.4 0.0 2.7e-16 2.7e-16 504 588 .. 416 503 .. 399 504 .. 0.89 Alignments for each domain: == domain 1 score: 107.9 bits; conditional E-value: 1.3e-34 AA3_3.hmm 3 vDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddplvvkPalflsnlkpesktalfykaekseeldgRelivpaggvlGGGssinfl 95 +D ii+G+Gtag++ a +l++ +p+ kvll+e+G +p+v + + s ++ + y ++ ++ + R++ +p ++ GG s+n + UJR18652.1|AA3_2 5 YDYIIIGAGTAGSILARKLSD-NPQNKVLLIEEGYWLSLNPQVQNASQWYS-IRFDPLIERGYVSTLQAGFGYRSIPIPRAKGTGGTNSMNGM 95 899****************97.6788*****************99887765.66677777788888999999********************* PP AA3_3.hmm 96 mYtraqasDfds.w.kteGWsakdllpllkkletyqgkgdeevhGkeGPikvskGtytskrveddfleaaeelgipevdDlqdletsngv... 183 ++ ++++Dfd+ w ++GWs +dl + k + + P+ +++ + ++++++a+e g+++ ++ +dl++ +g UJR18652.1|AA3_2 96 VFIIGNRKDFDErWgPINGWSWNDLSSYWKSIQKTISPS---------PL-----DPKHP-LIQKLIKSATENGYKYNRNPNDLDSKQGQggv 173 **********9747669********99988775433332.........22.....22333.6678***********99999999888765333 PP AA3_3.hmm 184 ...eralryvsrd.GrRqDaAhaylhpklksgkkpnLhvlveskvsrvlfenk.ravgvelvpnkafqkeaksksrtvkarklvvvsaGalgt 271 ++++ +s + +R + +ay+ p l +nL +lv ++v+++lf+++ r++gv ++ + ++ +rk +++saG + t UJR18652.1|AA3_2 174 strIHMAKKISDNyAERMSSWNAYIQPILPR---KNLDILVFTQVTKILFDKSlRSIGVTTYNIGK------KEYIYFYSRKEIILSAGVFDT 257 33236789999999***************99...9***************8776999998765443......3456789************** PP AA3_3.hmm 272 PlvLeRsGiGakevLekagvkvvvdlpgvGenyqDHkll 310 P++L sGiG + L k ++k ++d+pgvG+n+qDH+ l UJR18652.1|AA3_2 258 PKLLLLSGIGPCNELIKHNIKCLADVPGVGKNLQDHTFL 296 ************************************876 PP == domain 2 score: 7.2 bits; conditional E-value: 0.0004 AA3_3.hmm 408 ltlsaftayPysrGsihitspdpeeeidFetgflkdkaDlkklvwaYkkqRei 460 + +++ t + srGsi +++p +++ + fl+++ D++k++++ + R + UJR18652.1|AA3_2 344 IQIFVETFHYTSRGSITLFDKNPFSKPIINPNFLSNSYDINKTLHSVQVARKF 396 55666677889********************************9999888875 PP == domain 3 score: 47.4 bits; conditional E-value: 2.7e-16 AA3_3.hmm 504 eYtaeDdaaiedwvrenvettWhslgtckmaprek...ggvvdkkLnvyGvegLkvaDlsivPenvgantnstallvGekaadiilke 588 ++ +D++ + +w++en+++ h +tc+m+ + + vv+ +L+v +++L++aD si+P +++n n+ +++G kaa++il++ UJR18652.1|AA3_2 416 SFHINDEKKLLQWIKENIKSDAHPSSTCSMGNNFQdnhMIVVNPRLKVRHTKQLRIADGSIIPYLISGNPNQITMIIGMKAAEMILED 503 56789*************************987553336799*******************************************987 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 104.0 0.0 2.1e-33 2.1e-33 15 320 .. 3 298 .. 1 312 [. 0.81 2 ! 42.9 0.0 7e-15 7e-15 405 546 .. 352 502 .. 336 504 .. 0.73 Alignments for each domain: == domain 1 score: 104.0 bits; conditional E-value: 2.1e-33 AA3_1.hmm 15 etyDyivvGaGagGivvAdrLs.eagkkvLLlekGgpstyatggtekpewlentnltrfDvpglcneiladssgvactdtaqmagcvlGGgta 106 + yDyi++GaG++G ++A +Ls + +kvLL+e+G + + ++ +w rfD ++ + ++g + + + ++ GG + UJR18652.1|AA3_2 3 NCYDYIIIGAGTAGSILARKLSdNPQNKVLLIEEGYWLSLNPQVQNASQW----YSIRFDPLIERGYVSTLQAGFGYRSIPIPRAKGTGGTNS 91 67********************66789********888888788889999....6779998888888888888888899999999999***** PP AA3_1.hmm 107 vNaglfvkpqasdfddkfp..kgwksedvqdaadrvferiPgtttpS.kdgklydqqgydvlssvlekaGwkevdaneepdeknkvyg..... 191 +N ++f+ +++dfd+++ +gw+++d++++ + + ++i +pS d k+ q l + ++G+k+ ++ d+k+ g UJR18652.1|AA3_2 92 MNGMVFIIGNRKDFDERWGpiNGWSWNDLSSYWKSIQKTI----SPSpLDPKHPLIQK---LIKSATENGYKYNRNPNDLDSKQGQGGvstri 177 *****************96679***********9999988....44413555554444...56677889999998888888887543311111 PP AA3_1.hmm 192 ..hppfmisngerggPlatYLpsAkkrsNfklilntkVkrvv.rsggkvtGVevessgGqrevikvtkggrVilsAGalsspkiLlrSGigpk 281 + + +er ++ + Y++ r+N ++ t+V+++ + + GV++ + G++e i + +++ilsAG++ +pk+Ll SGigp UJR18652.1|AA3_2 178 hmAKKISDNYAERMSSWNAYIQPILPRKNLDILVFTQVTKILfDKSLRSIGVTTY-NIGKKEYIYFYSRKEIILSAGVFDTPKLLLLSGIGPC 269 002233334589*****************************944555788**999.9************************************ PP AA3_1.hmm 282 dqlevvkasasdgvtliaksdwinlpvGknlkdhpntdl 320 ++l + ++++a+ vGknl+dh+ + l UJR18652.1|AA3_2 270 NELIKHN------IKCLAD----VPGVGKNLQDHTFLEL 298 *995444......333332....2469999999987665 PP == domain 2 score: 42.9 bits; conditional E-value: 7e-15 AA3_1.hmm 405 gltSrGrleitakg..ntvvskkpylsdaeDkeavaqfienliaalsa......asgltlvspasnttvedlvksll....vsvakrsanHwm 485 tSrG++++ +k + + + +ls++ D++ ++ ++ ++ l + ++++ +++s + +++ + + +s +H + UJR18652.1|AA3_2 352 HYTSRGSITLFDKNpfSKPIINPNFLSNSYDINKTLHSVQVARKFLLSksiselIEKFNKFNIPSFHINDEK----KllqwIKENIKSDAHPS 440 567888888876543466677777888888888888888877776555331112222233333333333222....12222466778999*** PP AA3_1.hmm 486 gtaklGtdd.sggtsvvDlntkVyGtdNLfVvDASifpdlptgNpsaiimvaaekaaekila 546 +t+++G + + vv++ kV t+ L ++D+Si+p l+ gNp+ i m+++ kaae il UJR18652.1|AA3_2 441 STCSMGNNFqDNHMIVVNPRLKVRHTKQLRIADGSIIPYLISGNPNQITMIIGMKAAEMILE 502 ******876778889*********************************************96 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 9.7 0.0 0.00011 0.00011 4 37 .. 5 39 .. 2 93 .. 0.79 2 ! 8.6 0.0 0.00024 0.00024 207 306 .. 177 293 .. 117 305 .. 0.68 3 ! 15.2 0.0 2.4e-06 2.4e-06 469 530 .. 438 502 .. 427 504 .. 0.92 Alignments for each domain: == domain 1 score: 9.7 bits; conditional E-value: 0.00011 AA3_4.hmm 4 vdvliaGSGpiGatyArtlvd.aglkvlmveiGaq 37 +d +i+G+G G++ Ar+l d ++ kvl++e G UJR18652.1|AA3_2 5 YDYIIIGAGTAGSILARKLSDnPQNKVLLIEEGYW 39 7999*****************77999****98865 PP == domain 2 score: 8.6 bits; conditional E-value: 0.00024 AA3_4.hmm 207 wssaatilgdklsekkk.........kkekfeLltetrctkleldeskekkieaaevkdLlknk.dllvkakvyviaaGavltpqiLanSgfg 289 + a++i ++ ++ ++ ++++++l t++tk+ d+s ++i + + ++ k++ ++ + k ++++aG tp++L Sg+g UJR18652.1|AA3_2 177 IHMAKKISDNYAERMSSwnayiqpilPRKNLDILVFTQVTKILFDKS-LRSIGVTT-YNIGKKEyIYFYSRKEIILSAGVFDTPKLLLLSGIG 267 5555555555444333333333333334589999999*****99884.34455444.444444426678899999*****************9 PP AA3_4.hmm 290 ke.........keellpaLgkylteq 306 +p +gk+l ++ UJR18652.1|AA3_2 268 PCnelikhnikCLADVPGVGKNLQDH 293 98777665555334566667777665 PP == domain 3 score: 15.2 bits; conditional E-value: 2.4e-06 AA3_4.hmm 469 hitGttragk...dketsvvdenskvwgfknLyvGGngvIptafaaNPtlTsvafAikgaekive 530 h + t +g+ d++ vv+ + kv ++k L ++ ++Ip ++ NP ++ + +k+ae i e UJR18652.1|AA3_2 438 HPSSTCSMGNnfqDNHMIVVNPRLKVRHTKQLRIADGSIIPYLISGNPNQITMIIGMKAAEMILE 502 667899999988889999*******************************************9987 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (505 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 51.52 // Query: 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 [L=655] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-133 435.0 0.0 1.5e-133 434.8 0.0 1.0 1 AA3_2.hmm 7.5e-78 250.7 0.0 9.9e-78 250.3 0.0 1.0 1 AA3.hmm 1e-59 190.8 0.0 1.5e-59 190.2 0.0 1.2 1 AA3_3.hmm 4.1e-39 122.9 0.1 1.7e-14 41.6 0.0 3.4 3 AA3_1.hmm 4.3e-10 27.5 0.0 1e-05 13.1 0.0 3.0 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 434.8 0.0 1.5e-133 1.5e-133 2 567 .. 12 635 .. 11 636 .. 0.83 Alignments for each domain: == domain 1 score: 434.8 bits; conditional E-value: 1.5e-133 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsedpn.vsVlviEaGgdeendplid 45 syD+++VG+GtAG +A++L+ +p sVl++E+G++ + ++++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 12 SYDFIVVGAGTAGGYLAHKLATSPYsPSVLLLENGPNTLS-NNTN 55 8*********************87527********99876.4555 PP AA3_2.hmm 46 vpglagsl....lgs........eldwnyttepqkglnnrsiklp 78 +p+ +l g+ + +++y+t+pqk+l++r++ ++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 56 NPADNPNLksliPGNfaenvarpDTNYMYKTVPQKHLDDRVLVYH 100 555444333333222334455569********************* PP AA3_2.hmm 79 rGkvlGGssaiNamlytrgskadydaWaellgnegWswdnllpyf 123 rG++lGG+s +N+m+++ g k+d+d+Wae +g+++++ ++ + + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 101 RGRGLGGTSNLNYMAWIKGYKGDFDEWAEIVGDQNYGSNEGWERI 145 ********************************************* PP AA3_2.hmm 124 kksetftppdeeq.deanitydasvhgtsGplkvsfpeeasplsk 167 k+ e+f p+ + e+ ++ d s+hgt Gp++ + p++ p 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 146 KRLESFDPKGLPKaYEKYASPDMSSHGTMGPIHNTLPTNPLPGMG 190 ********765555889999************************* PP AA3_2.hmm 168 allealeelGvptnkdlnsgdalGvslvpstidpttgtRssaata 212 +++++ e+G+p+ d n g+++G++lv+ +i + g R s+at+ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 191 SFIDGCVEAGIPRALDTNCGQNIGAGLVNMAIYK--GARVSSATQ 233 **********************************..********* PP AA3_2.hmm 213 yldp.......vekrsnltvltnatvtkilfdstkkkatGVevtk 250 l++ + + +nl+v t++ v+kilfd++ +a+GV+v+ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 234 CLNEegdigtgLIRPRNLEVRTDTKVEKILFDHK--TAIGVQVEG 276 ***8777766556799******************..9******98 PP AA3_2.hmm 251 kdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeLeklgIpv 295 g+ ++ a+kEVI+saG i+sP+lL+lSGiGpk++L++lgI+v 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 277 --GR--KFFAKKEVIISAGFIDSPKLLLLSGIGPKADLQELGIKV 317 ..65..79************************************* PP AA3_2.hmm 296 vvdlpgVGenLqDhllvpvsfevkepl..etldellsdptvaaea 338 v+d p+VG+n+ Dh +v + +k++l +t + l+s+p++ +++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 318 VHDSPNVGKNMLDHSTVLLDPIFKQDLqvPTGNLLFSEPARVDAE 362 ****************99876666654338888899********* PP AA3_2.hmm 339 laeylan.......ktGpltssv.sevlafvklpeilskeeksnl 375 + +l + ++G +++ + s +af+k +++ee 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 363 KKLWLDTyqngkgeARGEMARFGaSAGVAFIK----FTEEER--- 400 ****9864443333335555444344555555....444444... PP AA3_2.hmm 376 asla.......aqeelladedvpdlelvlvplalntaes...pae 410 ++++ ++++ +d+ pd e++++ ++ + + ++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 401 EQWPewqalsdEDRSRFLDKGRPDTEIFYLIGYKPPGKDfpeGTS 445 2333222554544445559**********8776666666765233 PP AA3_2.hmm 411 gknylsilvvllkplSrGsvklasadpldkplidpnylsdplDle 455 ++y+ + ++ ++ l rG+++l+s++p+d+p+idp+y+s+p+D++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 446 PNSYARLFLLHQNHLARGTISLNSSNPSDAPVIDPQYFSHPYDVR 490 369****************************************** PP AA3_2.hmm 456 vlvegvklarkiastkalkel.vaeeva.....pg.......... 484 + +e +k a +i++tkal+++ v e + p 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 491 ISIETIKKAVEIFKTKALSAHfVGMEFKgcaedPAwiqdspekae 535 ******************986243333333333225555555666 PP AA3_2.hmm 485 ..............aevq...sdeeleeyiresl.stvyHpvGTc 511 +d+ +e +++++ + yH +GT 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 536 enrlkaeqnggfyvN--GidmTDKGIEHWLKSKGlDQGYHGMGTL 578 667666666666542..04449*********98769********* PP AA3_2.hmm 512 amgpre.kggVVDselrVyGvknLRVvDaSvfPllvsahtqatvy 555 +mg+ k+ VVDs+ rV Gv++LR++D+Sv+P++++ h+q +y 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 579 RMGKAGdKMRVVDSKGRVVGVDGLRIADTSVIPVVMNNHPQVSAY 623 ****999************************************** PP AA3_2.hmm 556 avAekaAdlIke 567 +A +Ad I++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 624 LIADVVADGILR 635 ********9986 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 250.3 0.0 9.9e-78 9.9e-78 87 406 .. 10 642 .. 5 651 .. 0.86 Alignments for each domain: == domain 1 score: 250.3 bits; conditional E-value: 9.9e-78 AA3.hmm 87 keeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlnee. 126 e+yD+++vG+G+aG+ lA++L+ + +vlllE+G++ l + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 10 SESYDFIVVGAGTAGGYLAHKLATSpyspSVLLLENGPNTLSNNt 54 689***********************************9877666 PP AA3.hmm 127 ......kklied......evklds...............tepq.. 142 + + + + t+pq 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 55 nnpadnP----NlkslipG----NfaenvarpdtnymykTVPQkh 91 6544331....12223331....1334444555688999999999 PP AA3.hmm 143 lngrriilprgkvlGGsslinamvylrgqaedfdawaee.g.egw 185 l++r + + rg++lGG+s+ n+m +++g + dfd+wae g +++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 92 LDDRVLVYHRGRGLGGTSNLNYMAWIKGYKGDFDEWAEIvGdQNY 136 999999999******************************976778 PP AA3.hmm 186 swddllpyfkkaeell............................. 201 + ++ + k++e++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 137 GSNEGWERIKRLESFDpkglpkayekyaspdmsshgtmgpihntl 181 8899999******99999999988888888887777777776666 PP AA3.hmm 202 ........r...................................r 203 + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 182 ptnplpgmGsfidgcveagipraldtncgqnigaglvnmaiykgA 226 666555550555556666666667777777788888888889998 PP AA3.hmm 204 rssaakayldplpa........pnleiltnarvtkilf....... 233 r s+a+ l++ + nle++t+++v+kilf 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 227 RVSSATQCLNEEGDigtglirpRNLEVRTDTKVEKILFdhktaig 271 88888888888544568999999***************9988876 PP AA3.hmm 234 ....agtl.vaakeVilaaGaigspqlLllSgigpaee.eslgip 272 g+ +a+keVi++aG i sp+lLllSgigp+++ ++lgi+ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 272 vqveGGRKfFAKKEVIISAGFIDSPKLLLLSGIGPKADlQELGIK 316 665433455************************************ PP AA3.hmm 273 vvvdlp.vgenlq................................ 284 vv+d p vg+n+ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 317 VVHDSPnVGKNMLdhstvlldpifkqdlqvptgnllfseparvda 361 ********************************************* PP AA3.hmm 285 ............................................. 284 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 362 ekklwldtyqngkgeargemarfgasagvafikfteeereqwpew 406 ********************************************* PP AA3.hmm 285 ............................................. 284 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 407 qalsdedrsrfldkgrpdteifyligykppgkdfpegtspnsyar 451 ********************************************* PP AA3.hmm 285 ......apks....svrlnssdpldpplidpnylsderdvellve 319 + ++ lnss+p d+p+idp+y+s++ dv+ +e 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 452 lfllhqN--HlargTISLNSSNPSDAPVIDPQYFSHPYDVRISIE 494 ***9651..34568**********************988888888 PP AA3.hmm 320 gvr.......................................... 322 ++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 495 TIKkaveifktkalsahfvgmefkgcaedpawiqdspekaeenrl 539 88888889999999************9999999888877776666 PP AA3.hmm 323 .........eeetdd............tree.iqtiyHpvGtcrm 345 + + +++ +yH +Gt rm 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 540 kaeqnggfyV----NgidmtdkgiehwLKSKgLDQGYHGMGTLRM 580 6666655551....04445555899998888899*********** PP AA3.hmm 346 ged.dasaVVdpnlrvhgvenLrvvDasvfPtilggnpnltivai 389 g+ d++ VVd+++rv gv++Lr++D sv+P +p+ +++ i 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 581 GKAgDKMRVVDSKGRVVGVDGLRIADTSVIPVVMNNHPQVSAYLI 625 *99****************************************** PP AA3.hmm 390 aeraadlikkdngkqly 406 a +ad i+ d+ + + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 626 ADVVADGILRDHAASGK 642 *********99876654 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 190.2 0.0 1.5e-59 1.5e-59 2 587 .. 12 635 .. 11 637 .. 0.77 Alignments for each domain: == domain 1 score: 190.2 bits; conditional E-value: 1.5e-59 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddpl.. 44 +D i++G+Gtag+ a +la++ + +vll+e+G+n+l +++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 12 SYDFIVVGAGTAGGYLAHKLATSPYSPSVLLLENGPNTLSNNTnn 56 69*********************************9865433211 PP AA3_3.hmm 45 ......v..vkPalflsnlkpesktalfykaekseeldgRelivp 81 + P f +n+ + +t +yk+ ++++ld+R l+ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 57 padnpnLksLIPGNFAENVARP-DTNYMYKTVPQKHLDDRVLVYH 100 1011113113466777776655.5667899*************** PP AA3_3.hmm 82 aggvlGGGssinflmYtraqasDfdsw..........kteGWsak 116 g lGG s +n++ + ++ + Dfd+w ++eGW+ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 101 RGRGLGGTSNLNYMAWIKGYKGDFDEWaeivgdqnygSNEGWE-- 143 ***************************8887555555555665.. PP AA3_3.hmm 117 dllpllkkletyqgkg...........deevhGkeGPikvskGty 150 +k+le++ kg d++ hG+ GPi+ t 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 144 ----RIKRLESFDPKGlpkayekyaspDMSSHGTMGPIHNTLPTN 184 ....55554444444333333333456899************999 PP AA3_3.hmm 151 tskrveddfleaaeelgipevdDlqdletsngveralryvsrdGr 195 + +f+++ e+gip+ D + ++ g+ + + +G 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 185 PLP-GMGSFIDGCVEAGIPRALDTNCGQNI-GAGLVNMAI-YKGA 226 999.7899***************9776654.444433333.48** PP AA3_3.hmm 196 RqDaAhaylhpklksgk....kpnLhvlveskvsrvlfenkravg 236 R +A++ l ++ + g+ nL+v +++kv+++lf+ k a+g 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 227 RVSSATQCLNEEGDIGTglirPRNLEVRTDTKVEKILFDHKTAIG 271 **********9987765223268********************** PP AA3_3.hmm 237 velvpnkafqkeaksksrtvkarklvvvsaGalgtPlvLeRsGiG 281 v+++ ++f a+k v++saG + +P++L sGiG 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 272 VQVEGGRKF-----------FAKKEVIISAGFIDSPKLLLLSGIG 305 *99876665...........4689********************* PP AA3_3.hmm 282 akevLekagvkvvvdlpgvGenyqDHklllv..pyraalepsetl 324 k+ L+++g+kvv d p vG+n DH ++l ++++ l+ t 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 306 PKADLQELGIKVVHDSPNVGKNMLDHSTVLLdpIFKQDLQ-VPTG 349 **************************99886335788864.4555 PP AA3_3.hmm 325 dallrgr..kdveealk.........ekkgilgtngidvgvklRP 358 + l + d+e++l e +g ++ g +gv + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 350 NLLFSEParVDAEKKLWldtyqngkgEARGEMARFGASAGVAFIK 394 655554411455555547899999888899999999999998666 PP AA3_3.hmm 359 teeevealgpeFkeawdrdfknkpd..kplmllavvagflgd... 398 +ee ++ pe+++ d+d ++ d +p + + ++ g+ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 395 FTEEEREQWPEWQALSDEDRSRFLDkgRPDTEIFYLIGYKPPgkd 439 55555666799**99999866544411454444444444433011 PP AA3_3.hmm 399 .pslvpekkyltlsaftayPysrGsihitspdpeeeidFetgflk 442 p+ +++ y l+ + +rG+i s++p++++ + +++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 440 fPEGTSPNSYARLFLLHQNHLARGTISLNSSNPSDAPVIDPQYFS 484 245558999************************************ PP AA3_3.hmm 443 dkaDlkklvwaYkkqReiaRRmd...vyrg.ela..aahPkfakg 481 ++ D++ ++ + kk ei++ + g e++ a P++ ++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 485 HPYDVRISIETIKKAVEIFKTKAlsaHFVGmEFKgcAEDPAWIQD 529 ******************986541114555455533568999999 PP AA3_3.hmm 482 skaalveldaekkeskkkvedieYtaeDdaaiedwvren.vettW 525 s+ +++e k++++ ++ + d+ ie+w++++ ++ + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 530 SPEKAEENR--LKAEQNGGFYVNGIDMTDKGIEHWLKSKgLDQGY 572 998888883..3333444445566666799******97659**** PP AA3_3.hmm 526 hslgtckmapr.ekggvvdkkLnvyGvegLkvaDlsivPenvgan 569 h +gt +m+ +k vvd+k v Gv+gL++aD s++P + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 573 HGMGTLRMGKAgDKMRVVDSKGRVVGVDGLRIADTSVIPVVMNNH 617 ********75527789***********************999999 PP AA3_3.hmm 570 tnstallvGekaadiilk 587 + +a+l+ + ad il+ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 618 PQVSAYLIADVVADGILR 635 999999999988887665 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.6 0.0 1.7e-14 1.7e-14 11 124 .. 7 127 .. 2 153 .. 0.70 2 ! 41.2 0.0 2.2e-14 2.2e-14 217 341 .. 249 358 .. 245 392 .. 0.80 3 ! 36.1 0.0 7.9e-13 7.9e-13 463 545 .. 554 634 .. 444 637 .. 0.76 Alignments for each domain: == domain 1 score: 41.6 bits; conditional E-value: 1.7e-14 AA3_1.hmm 11 pvaketyDyivvGaGagGivvAdrLsea..gkkvLLlekGgpsty 53 + +e+yD+ivvGaG++G +A++L+ + + +vLLle+G+ ++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 7 AAYSESYDFIVVGAGTAGGYLAHKLATSpySPSVLLLENGPNTLS 51 567899*******************98733678*******66655 PP AA3_1.hmm 54 atggt..ekpewle.......ntnltrfDvpglcneiladssgva 89 + ++ ++p+ l+ +n++r D +++++ + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 52 NNTNNpaDNPN-LKslipgnfAENVARPDTNYMYKTVPQ------ 89 54443322222.222333333344444444444444433...... PP AA3_1.hmm 90 ctdta........qmagcvlGGgtavNaglfvkpqasdfddkf 124 + g lGG + +N++ ++k + dfd+ + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 90 ----KhlddrvlvYHRGRGLGGTSNLNYMAWIKGYKGDFDE-W 127 ....133344466789***********************84.4 PP == domain 2 score: 41.2 bits; conditional E-value: 2.2e-14 AA3_1.hmm 217 sNfklilntkVkrvvrsggkvtGVevessgGqrevikvtkggrVi 261 N + +++tkV+++ +++ GV+ve gG +k ++++Vi 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 249 RNLEVRTDTKVEKILFDHKTAIGVQVE--GG----RKFFAKKEVI 287 58999**********************..55....4555789*** PP AA3_1.hmm 262 lsAGalsspkiLlrSGigpkdqlevvkasasdgvtliaksdwinl 306 +sAG + spk+Ll SGigpk+ l+ + ++++++ + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 288 ISAGFIDSPKLLLLSGIGPKADLQELG------IKVVHD----SP 322 ***********************8776......444544....36 PP AA3_1.hmm 307 pvGknlkdhpntdlkiktke.isaydfyealtspit 341 +vGkn+ dh+ + l+ k+ ++ + +++p + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 323 NVGKNMLDHSTVLLDPIFKQdLQVPTGNLLFSEPAR 358 899999999988887444444666555555666555 PP == domain 3 score: 36.1 bits; conditional E-value: 7.9e-13 AA3_1.hmm 463 ttvedlvksllvsvakrsanHwmgtaklGtddsggtsvvDlntkV 507 +t++ + + l +s + ++ H mgt ++G+ + ++ +vvD + +V 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 554 MTDKGIEHWL-KSKGLDQGYHGMGTLRMGK-AGDKMRVVDSKGRV 596 3333333333.889999************6.59999********* PP AA3_1.hmm 508 yGtdNLfVvDASifpdlptgNpsaiimvaaekaaekil 545 +G+d L ++D S++p ++ p++ +a+ a il 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 597 VGVDGLRIADTSVIPVVMNNHPQVSAYLIADVVADGIL 634 *******************************9999998 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.1 0.0 0.043 0.043 3 38 .. 12 49 .. 10 99 .. 0.82 2 ! 9.4 0.0 0.00013 0.00013 227 314 .. 250 339 .. 226 372 .. 0.70 3 ! 13.1 0.0 1e-05 1e-05 468 522 .. 572 627 .. 560 636 .. 0.86 Alignments for each domain: == domain 1 score: 1.1 bits; conditional E-value: 0.043 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaqd 38 ++d +++G+G G A++l+ + +vl++e G ++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 12 SYDFIVVGAGTAGGYLAHKLATspYSPSVLLLENGPNT 49 6899*****************95556779999999864 PP == domain 2 score: 9.4 bits; conditional E-value: 0.00013 AA3_4.hmm 227 kfeLltetrctkleldeskekkieaaevkdLlknkdllvkakvyv 271 ++e++t+t+++k+ d++ + + +++ +++ k ++ 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 250 NLEVRTDTKVEKILFDHK--T-AIGV---QVEGGRKF-FAKKEVI 287 667777777777766652..1.1222...23334444.4567899 PP AA3_4.hmm 272 iaaGavltpqiLanSgfgke.........keellpaLgkylteqs 307 i+aG + +p++L Sg+g + + p++gk++ ++s 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 288 ISAGFIDSPKLLLLSGIGPKadlqelgikVVHDSPNVGKNMLDHS 332 *****************9977777777665556677777777776 PP AA3_4.hmm 308 mafcqvv 314 +++ + + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 333 TVLLDPI 339 6655555 PP == domain 3 score: 13.1 bits; conditional E-value: 1e-05 AA3_4.hmm 468 lhitGttragk.dketsvvdenskvwgfknLyvGGngvIptafaa 511 h Gt r+gk ++ vvd++++v g++ L ++ +vIp + 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 572 YHGMGTLRMGKaGDKMRVVDSKGRVVGVDGLRIADTSVIPVVMNN 616 5789*******768999************************9999 PP AA3_4.hmm 512 NPtlTsvafAi 522 P + + +A 538351|Morco1_GeneCatalog_proteins_20140113.aa.fasta|AA3_2|AA3_2 617 HPQVSAYLIAD 627 99988887775 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (655 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 104.53 // Query: 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 [L=553] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.1e-139 452.2 0.0 9.2e-139 452.0 0.0 1.0 1 AA3_2.hmm 1.6e-85 276.0 0.0 1.8e-85 275.8 0.0 1.0 1 AA3.hmm 1.2e-61 197.1 0.0 4.5e-46 145.7 0.0 3.0 2 AA3_3.hmm 3.3e-43 136.4 0.0 5.1e-18 53.2 0.0 3.2 3 AA3_1.hmm 9.4e-16 46.2 0.0 4.3e-09 24.2 0.0 3.1 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 452.0 0.0 9.2e-139 9.2e-139 2 567 .. 4 546 .. 3 547 .. 0.93 Alignments for each domain: == domain 1 score: 452.0 bits; conditional E-value: 9.2e-139 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsed.pnvsVlviEaGgdeendplid 45 ++D+++VG+G AG+ +AsrLs p sVl++EaG++ ++ +l d 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRTpPAPSVLLVEAGDSLDDPDLRD 48 8*********************74778************988888 PP AA3_2.hmm 46 vpglagsllgseldwnyttepqkglnnrsiklprGkvlGGssaiN 90 + +++ +l + +l w + qk++n+r++++prGk+lGGs+ N 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 49 TARKFVNLADPSLGWTRYSHVQKNVNGRRVAYPRGKGLGGSTMTN 93 8899***************************************** PP AA3_2.hmm 91 amlytrgskadydaWaellgnegWswdnllpyfkksetftppdee 135 am+y g +++yd Wa+ +g+++W w ++++ f+++e+f++ +++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 94 AMVYYVGPSDEYDFWADVTGSPKWRWPETKERFRRIERFHDDTPA 138 ********************************************* PP AA3_2.hmm 136 qdeanitydasvhgtsGplkvsfpeeasplskallealeelGvpt 180 + ++ +++ ++ hg++Gpl+vs p+ +++ +++e +++ G+p+ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 139 DFRKYAHTLPENHGSKGPLDVSLPSVWESGVWKVFEIAQAHGYPI 183 *8899999************************************* PP AA3_2.hmm 181 nkdlnsgdalGvslvpstidpttgtRssaatayldpvekrsnltv 225 n+d+nsg+++G++++pst+++ g R++aa+a+l++ + +nl v 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 184 NPDQNSGNPIGIGMSPSTVSH--GLRATAASAFLEN--RPPNLMV 224 *********************..************7..89***** PP AA3_2.hmm 226 ltnatvtkilfdstkkkatGVevtkkdgkkytvkarkEVILsaGa 270 tna vt+ilf + +a GVe+++ g+ ++ +k IL+aGa 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 225 WTNAFVTRILFAGR--TAVGVELAD--GR--SARGTKATILCAGA 263 **************..9******99..55..799999******** PP AA3_2.hmm 271 insPqlLmlSGiGpkeeLeklgIpvvvdlpgVGenLqDhllvpvs 315 +++P+lL+lSG+Gpk++L lgI+vv+dl+gVG+nLqDh+ + + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 264 LDTPKLLLLSGVGPKADLVPLGIEVVHDLEGVGKNLQDHIQCLIE 308 ********************************************* PP AA3_2.hmm 316 fevkepletldellsdptvaaealaeylanktGpltssvsevlaf 360 +++++l + d ++ ++ + +k Gp++ + + f 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 309 TRLSKKLLDRD-VV----------RHGEPDKAGPWS---CLPFCF 339 ****9953333.22..........22235789***9...4569** PP AA3_2.hmm 361 vklpeilskeeksnlaslaaqeelladedvpdlelvl.vplalnt 404 +k++e l++ee++ l+ + +++l+ ++vp+l l + +pl+ + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 340 LKVDENLETEEFKLLDP--SMQDFLKGKTVPQLSLGMaAPLFSRG 382 *******9999953222..55788889********9956776666 PP AA3_2.hmm 405 aespaegknylsilvvllkplSrGsvklasadpldkplidpnyls 449 + p++ y + +l++p+SrG+vkl+sa+p+d+p d+n ls 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 383 RVFPEDVCYYHVYVNCLMNPQSRGEVKLRSANPADPPHFDFNALS 427 666988888999999****************************** PP AA3_2.hmm 450 dplDlevlvegvklarkiastkalkelvaeevapgaevqsdeele 494 +p+Dl++ ++ ++ ++++++ ++ +e+ + ++ g++ ++d+++e 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 428 HPYDLRTYINNTRKVMEFIEGDSNSEYFEGYIN-GPASKTDQDIE 471 **********************99999976555.67789****** PP AA3_2.hmm 495 eyireslstvyHpvGTcamgpre..kggVVDselrVyGvknLRVv 537 +++r++ yH++GT+ mg+ e k ++V ++++++Gv+nL V+ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 472 TWLRAVSGPQYHATGTAMMGKPEtnKLACVGPDFQIFGVENLYVA 516 *********************999999****************** PP AA3_2.hmm 538 DaSvfPllvsahtqatvyavAekaAdlIke 567 D Sv P+ + + tq+t+y+vAe aA+ ++e 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 517 DLSVCPTTPCCMTQSTAYMVAETAAETLIE 546 *************************98875 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 275.8 0.0 1.8e-85 1.8e-85 86 400 .. 1 547 [. 1 552 [. 0.86 Alignments for each domain: == domain 1 score: 275.8 bits; conditional E-value: 1.8e-85 AA3.hmm 86 skeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlnee 126 + +++D+++vG+GaaG+ lAsrLs++ +vll+EaG + ++ + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 1 MSNQFDFIVVGAGAAGCLLASRLSRTppapSVLLVEAGDSLDDPD 45 5789**********************************9876633 PP AA3.hmm 127 .....kkliede.vkl.ds.........tepq..lngrriilprg 153 + + v+l d+ q ngrr +prg 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 46 lrdtaR-----KfVNLaDPslgwtryshV--QknVNGRRVAYPRG 83 443321.....222223224555455323..256*********** PP AA3.hmm 154 kvlGGsslinamvylrgqaedfdawaee.g.egwswddllpyfkk 196 k+lGGs++ namvy+ g +++d+wa+ g ++w+w + ++ f++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 84 KGLGGSTMTNAMVYYVGPSDEYDFWADVtGsPKWRWPETKERFRR 128 ****************************99999************ PP AA3.hmm 197 aeell........................................ 201 +e+++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 129 IERFHddtpadfrkyahtlpenhgskgpldvslpsvwesgvwkvf 173 ******999999998888888877777777666666666555555 PP AA3.hmm 202 r...............................rrssaakayldpl 215 + r +aa+a+l++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 174 EiaqahgypinpdqnsgnpigigmspstvshgLRATAASAFLEN- 217 05555666666667777777788888888888999******988. PP AA3.hmm 216 pa.pnleiltnarvtkilf.....ag......tl.vaakeVilaa 247 + pnl ++tna vt+ilf +g + + +k il+a 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 218 -RpPNLMVWTNAFVTRILFagrtaVGveladgRSaRGTKATILCA 261 .77****************8776622555555455999******* PP AA3.hmm 248 GaigspqlLllSgigpaee.eslgipvvvdlp.vgenlq...... 284 Ga+ +p+lLllSg+gp+++ lgi+vv+dl+ vg+nlq 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 262 GALDTPKLLLLSGVGPKADlVPLGIEVVHDLEgVGKNLQdhiqcl 306 ********************************************* PP AA3.hmm 285 ............................................. 284 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 307 ietrlskklldrdvvrhgepdkagpwsclpfcflkvdenleteef 351 ********************************************* PP AA3.hmm 285 ............................................. 284 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 352 klldpsmqdflkgktvpqlslgmaaplfsrgrvfpedvcyyhvyv 396 ********************************************* PP AA3.hmm 285 ....apks..svrlnssdpldpplidpnylsderdvellvegvr. 322 +p+s +v+l+s++p+dpp++d+n ls++ d+++ + +r 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 397 nclmNPQSrgEVKLRSANPADPPHFDFNALSHPYDLRTYINNTRk 441 ****999999**********************8777777777776 PP AA3.hmm 323 ....................ee.etdd.....treeiqtiyHpvG 341 ++ +td+ r + yH++G 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 442 vmefiegdsnseyfegyingPAsKTDQdietwLRAVSGPQYHATG 486 666666777888888887763323333678954444999****** PP AA3.hmm 342 tcrmged..dasaVVdpnlrvhgvenLrvvDasvfPtilggnpnl 384 t++mg++ ++ a+V p+ + +gvenL+v+D sv+Pt++++ +++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 487 TAMMGKPetNKLACVGPDFQIFGVENLYVADLSVCPTTPCCMTQS 531 *****9987777********************************* PP AA3.hmm 385 tivaiaeraadlikkd 400 t++++ae aa+ ++++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 532 TAYMVAETAAETLIEK 547 ***********99887 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 145.7 0.0 4.5e-46 4.5e-46 2 459 .. 4 444 .. 3 460 .. 0.82 2 ! 46.7 0.0 4.2e-16 4.2e-16 509 590 .] 466 549 .. 462 549 .. 0.91 Alignments for each domain: == domain 1 score: 145.7 bits; conditional E-value: 4.5e-46 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddplvv 46 + D i++G+G+agc+ a+Rl+++ p +vllve+G+ lddp + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRTPPAPSVLLVEAGDS-LDDPDLR 47 679********************************75.6888887 PP AA3_3.hmm 47 kPalflsnlkpesktalfykaekseeldgRelivpaggvlGGGss 91 a nl s +++ +++++gR+++ p g+ lGG 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 48 DTARKFVNLADPSLG-WTRYSHVQKNVNGRRVAYPRGKGLGGSTM 91 777666666544433.33446677899****************** PP AA3_3.hmm 92 inflmYtraqasDfdsw....kteGWsakdllpllkkletyqgkg 132 n ++Y + + ++d w ++ W + + +++e ++ ++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 92 TNAMVYYVGPSDEYDFWadvtGSPKWRWPETKERFRRIERFHDDT 136 *****************76666788*****************987 PP AA3_3.hmm 133 ..........deevhGkeGPikvskGtytskrveddfleaaeelg 167 e hG++GP++vs ++ + +++e a++ g 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 137 padfrkyahtLPENHGSKGPLDVSLPSVWES-GVWKVFEIAQAHG 180 66565544333578***********999988.667788******* PP AA3_3.hmm 168 ipevdDlqdletsngveralryvsrdGrRqDaAhaylhpklksgk 212 +p D + + g+ vs +G R aA+a+l ++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 181 YPINPDQNS-GNPIGIGMSPSTVS-HGLRATAASAFLENR----- 218 **9998555.55558888888886.7**********9764..... PP AA3_3.hmm 213 kpnLhvlveskvsrvlfenkravgvelvpnkafqkeaksksrtvk 257 pnL v +++ v+r+lf ++ avgvel ++ + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 219 PPNLMVWTNAFVTRILFAGRTAVGVELADGRS-----------AR 252 699***********************976554...........45 PP AA3_3.hmm 258 arklvvvsaGalgtPlvLeRsGiGakevLekagvkvvvdlpgvGe 302 k+ ++ aGal tP++L sG+G k+ L +g++vv dl+gvG+ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 253 GTKATILCAGALDTPKLLLLSGVGPKADLVPLGIEVVHDLEGVGK 297 567899*************************************** PP AA3_3.hmm 303 nyqDHklllvpyraalepsetldallrgrkdveealkekkgilgt 347 n+qDH +l+ r + ++ d + +g++d + ++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 298 NLQDHIQCLIETRLS-KKLLDRDVVRHGEPDKA--GPWSCLPFCF 339 *******99999988.55555556666666554..4444444544 PP AA3_3.hmm 348 ngidvgvklRPteeevealgpeFkeawdrdfknkpdkplmllavv 392 +d l +ee + l+p + df + p + l ++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 340 LKVDE--NL--ETEEFKLLDPSMQ-----DFLKGKTVPQLSLGMA 375 44444..44..4789999999986.....7888888888888899 PP AA3_3.hmm 393 agflgdpslv..pekkyltlsaftayPysrGsihitspdpeeeid 435 a ++ +++ + + y + ++ P srG++ s++p+++++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 376 APLFSRGRVFpeDVCYYHVYVNCLMNPQSRGEVKLRSANPADPPH 420 9888888888323456777889999******************** PP AA3_3.hmm 436 FetgflkdkaDlkklvwaYkkqRe 459 F+ l+++ Dl++ + +k e 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 421 FDFNALSHPYDLRTYINNTRKVME 444 ************998876666555 PP == domain 2 score: 46.7 bits; conditional E-value: 4.2e-16 AA3_3.hmm 509 DdaaiedwvrenvettWhslgtckmaprek..ggvvdkkLnvyGv 551 d+ ie w+r+ + +h+ gt+ m+ e+ + v + +++Gv 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 466 TDQDIETWLRAVSGPQYHATGTAMMGKPETnkLACVGPDFQIFGV 510 5889*********************8766522689********** PP AA3_3.hmm 552 egLkvaDlsivPenvgantnstallvGekaadiilkeLG 590 e+L vaDls++P ++ t+sta++v e aa+ +++ G 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 511 ENLYVADLSVCPTTPCCMTQSTAYMVAETAAETLIEKFG 549 ********************************9999876 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 39.2 0.0 9.2e-14 9.2e-14 14 142 .. 2 131 .. 1 147 [. 0.73 2 ! 40.1 0.0 4.8e-14 4.8e-14 192 322 .. 197 309 .. 177 321 .. 0.84 3 ! 53.2 0.0 5.1e-18 5.1e-18 407 545 .. 403 545 .. 388 547 .. 0.79 Alignments for each domain: == domain 1 score: 39.2 bits; conditional E-value: 9.2e-14 AA3_1.hmm 14 ketyDyivvGaGagGivvAdrLsea..gkkvLLlekGgpstyatg 56 ++++D+ivvGaGa+G +A+rLs + +vLL+e G + + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 2 SNQFDFIVVGAGAAGCLLASRLSRTppAPSVLLVEAGD--SLDDP 44 579********************8733689*******3..44444 PP AA3_1.hmm 57 gt..ekpewlentnltrfDvpglcneilad.ssgvactdtaqmag 98 + + ++ + p+l + +++ +++v + +a g 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 45 DLrdTARKF------VNLADPSLGWTRYSHvQKNVNGRRVAYPRG 83 420123333......333447766555555488899999****** PP AA3_1.hmm 99 cvlGGgtavNaglfvkpqasdfd....dkfpkgwksedvqdaadr 139 + lGG+t+ Na++++ ++ ++d + w++ + ++ + r 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 84 KGLGGSTMTNAMVYYVGPSDEYDfwadVTGSPKWRWPETKERFRR 128 **************9999877763322345578999999999988 PP AA3_1.hmm 140 vfe 142 + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 129 IER 131 865 PP == domain 2 score: 40.1 bits; conditional E-value: 4.8e-14 AA3_1.hmm 192 hppfmisngerggPlatYLpsAkkrsNfklilntkVkrvvrsggk 236 +p +s+g r+ + +L++ +N ++n+ V+r+ g + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 197 MSPSTVSHGLRATAASAFLEN--RPPNLMVWTNAFVTRILFAGRT 239 5677899999********985..789******************* PP AA3_1.hmm 237 vtGVevessgGqrevikvtkggrVilsAGalsspkiLlrSGigpk 281 ++GVe+ +G ++ +++ il AGal +pk+Ll SG+gpk 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 240 AVGVELA--DG----RSARGTKATILCAGALDTPKLLLLSGVGPK 278 ******9..77....345578999********************* PP AA3_1.hmm 282 dqlevvkasasdgvtliaksdwinlpvGknlkdhpntdlki 322 + l + ++++++ + vGknl+dh + ++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 279 ADLVPLG------IEVVHDL----EGVGKNLQDHIQCLIET 309 **95554......4444432....57999999999988875 PP == domain 3 score: 53.2 bits; conditional E-value: 5.1e-18 AA3_1.hmm 407 tSrGrleitakg..ntvvskkpylsdaeDkeavaqfienliaals 449 +SrG++++ ++ + + ls++ D + +++ ++++ ++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 403 QSRGEVKLRSANpaDPPHFDFNALSHPYDLRTYINNTRKVMEFIE 447 577777777655332223334446777788888888888888888 PP AA3_1.hmm 450 aasgltl....vspasnttvedlvksllvsvakrsanHwmgtakl 490 +s+ ++ ++ ++ +t++d+ + l + H +gta + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 448 GDSNSEYfegyINGPASKTDQDIETWL--RAVSGPQYHATGTAMM 490 766665411115889999999999999..56778889******** PP AA3_1.hmm 491 GtddsggtsvvDlntkVyGtdNLfVvDASifpdlptgNpsaiimv 535 G+ ++++ ++v+++++++G++NL+V+D S+ p++p ++++ + 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 491 GKPETNKLACVGPDFQIFGVENLYVADLSVCPTTPCCMTQSTAYM 535 *999***************************************** PP AA3_1.hmm 536 aaekaaekil 545 +ae aae ++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 536 VAETAAETLI 545 ******9887 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 4.6 0.0 0.0038 0.0038 3 37 .. 4 40 .. 2 55 .. 0.90 2 ! 13.7 0.0 6.7e-06 6.7e-06 267 322 .. 254 318 .. 201 343 .. 0.82 3 ! 24.2 0.0 4.3e-09 4.3e-09 465 531 .. 479 547 .. 464 548 .. 0.94 Alignments for each domain: == domain 1 score: 4.6 bits; conditional E-value: 0.0038 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaq 37 ++d +++G+G G+ A l + +vl+ve G++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRtpPAPSVLLVEAGDS 40 79*******************9888999******985 PP == domain 2 score: 13.7 bits; conditional E-value: 6.7e-06 AA3_4.hmm 267 akvyviaaGavltpqiLanSgfgke.........keellpaLgky 302 k+ +++aGa tp++L Sg+g + + l+ +gk+ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 254 TKATILCAGALDTPKLLLLSGVGPKadlvplgieVVHDLEGVGKN 298 6899******************99999999999877889999*** PP AA3_4.hmm 303 lteqsmafcqvvLkkelves 322 l ++ ++ ++ L+k+l+++ 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 299 LQDHIQCLIETRLSKKLLDR 318 ***************99875 PP == domain 3 score: 24.2 bits; conditional E-value: 4.3e-09 AA3_4.hmm 465 glalhitGttragk..dketsvvdenskvwgfknLyvGGngvIpt 507 g + h tGt +gk +++ ++v + +++g++nLyv+ +v pt 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 479 GPQYHATGTAMMGKpeTNKLACVGPDFQIFGVENLYVADLSVCPT 523 6789**********9878999************************ PP AA3_4.hmm 508 afaaNPtlTsvafAikgaekivek 531 + + T+ +A +ae+++ek 136541|Claba1_GeneCatalog_proteins_20160826.aa.fasta|AA3_2|AA3_2 524 TPCCMTQSTAYMVAETAAETLIEK 547 *******************99986 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (553 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02 # Mc/sec: 70.52 // Query: 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 [L=553] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-137 448.2 0.0 1.6e-137 447.9 0.0 1.1 1 AA3_2.hmm 5.8e-85 274.2 0.0 6.7e-85 274.0 0.0 1.0 1 AA3.hmm 4.7e-64 205.1 0.0 1.4e-49 157.2 0.0 2.2 2 AA3_3.hmm 2e-44 140.4 0.0 5e-17 50.0 0.0 3.2 3 AA3_1.hmm 8.2e-17 49.7 0.0 1.5e-09 25.8 0.0 3.0 3 AA3_4.hmm Domain annotation for each model (and alignments): >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 447.9 0.0 1.6e-137 1.6e-137 2 567 .. 4 546 .. 3 547 .. 0.91 Alignments for each domain: == domain 1 score: 447.9 bits; conditional E-value: 1.6e-137 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsedpn.vsVlviEaGgdeendplidvp 47 ++D+++VG+G AG+ +AsrLs ++ sVl+iEaG+ ++ p+ + 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRTSTaPSVLLIEAGNVLDD-PNLRAA 49 8*********************76626***********97.777777 PP AA3_2.hmm 48 g.lagsllgseldwnyttepqkglnnrsiklprGkvlGGssaiNaml 93 g ++ +l + ++ w + qk+++++si +prGk+lGGs+ Nam+ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 50 GrKFVNLADPSMGWADYSHVQKNVSGKSIIYPRGKGLGGSTMTNAMV 96 5488899*******999999*************************** PP AA3_2.hmm 94 ytrgskadydaWaellgnegWswdnllpyfkksetftppdeeqdean 140 y gs+++yd Wa+ +g+++W w ++++ fk++e f++ ++ + ++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 97 YYVGSSEEYDYWADVTGCPKWRWPETKERFKRIEGFQDDTPIEYRKY 143 ***************************************99999999 PP AA3_2.hmm 141 itydasvhgtsGplkvsfpeeasplskallealeelGvptnkdlnsg 187 ++ +++ hg++Gp++vs p+ +++ ++++e +++ G+p+n d+nsg 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 144 AHPSPENHGSTGPVDVSLPSVWESGVSKVFEIAQAHGFPINLDQNSG 190 9********************************************** PP AA3_2.hmm 188 dalGvslvpstidpttgtRssaatayldpvekrsnltvltnatvtki 234 +++G++l+pst+++ g R++aa+a+l++ + +nltv t+a vt+i 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 191 NPIGIGLSPSTVSH--GLRTTAASAFLEN--RPPNLTVWTEAIVTRI 233 **************..************7..89************** PP AA3_2.hmm 235 lfdstkkkatGVevtkkdgkkytvkarkEVILsaGainsPqlLmlSG 281 lf++ +a GVe+++ g+ +++ +k IL+aGa+++P+lL+lSG 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 234 LFSGR--TAVGVELAN--GR--KAHGTKATILCAGALDTPKLLLLSG 274 *****..9******99..54..7999999****************** PP AA3_2.hmm 282 iGpkeeLeklgIpvvvdlpgVGenLqDhllvpvsfevkepletldel 328 iGpk++L lgI+vv+dlpgVG+nLqDhl + +++++l + d + 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 275 IGPKDDLVPLGIKVVHDLPGVGKNLQDHLQSLIETRLSKKLLDRD-V 320 **************************************9965555.4 PP AA3_2.hmm 329 lsdptvaaealaeylanktGpltssvsevlafvklpeilskeeksnl 375 ++d ++a + + + + f+k++e l++ee+++l 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 321 VRDG-EPDTAGQTWP-----------CLPFCFLKVEENLETEEFKQL 355 5453.2223333333...........66799*******999999554 PP AA3_2.hmm 376 aslaaqeelladedvpdlelvl.vplalntaespaegknylsilvvl 421 + + +e+l+ ++vp+l l + +pl+++ ++ + + y + +l 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 356 DP--SMQEYLKGKTVPQLSLGTaAPLFARGGRTFPDVSYYHVYVNCL 400 33..55778889********99567766666653333467778889* PP AA3_2.hmm 422 lkplSrGsvklasadpldkplidpnylsdplDlevlvegvklarkia 468 ++p+SrG+v+l+sa+p+d+p d+n ls+p+Dl++ ++ + +++++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 401 MNPQSRGEVRLRSANPQDPPCFDFNALSHPYDLRAYINNTCKVMEFI 447 *********************************************** PP AA3_2.hmm 469 stkalkelvaeevapgaevqsdeeleeyireslstvyHpvGTcamgp 515 + +a +++ a ++ g++ sde++e++++++ +H++G++ mg+ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 448 EGEANSSYFAGYIN-GPASRSDEDIEKWLKAVSGPQFHATGSVMMGR 493 ***99999986665.66779**************************9 PP AA3_2.hmm 516 re.kggVVDselrVyGvknLRVvDaSvfPllvsahtqatvyavAeka 561 e k ++VD+++rV G +nL V+D Sv P+ + + tq+t+y++Ae a 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 494 PEnKLACVDADFRVLGLENLYVADLSVCPTTPCCMTQSTAYMIAETA 540 99899****************************************** PP AA3_2.hmm 562 AdlIke 567 A+ ++e 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 541 AETLIE 546 *98875 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 274.0 0.0 6.7e-85 6.7e-85 86 401 .. 1 548 [. 1 551 [. 0.85 Alignments for each domain: == domain 1 score: 274.0 bits; conditional E-value: 6.7e-85 AA3.hmm 86 skeeyDvvivGsGaaGsvlAsrLsea....gvlllEaGeedlnee.. 126 + +++D+++vG+GaaG+ lAsrLs++ +vll+EaG+ ++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 1 MSNQFDFIVVGAGAAGCLLASRLSRTstapSVLLIEAGNVLDDPNlr 47 5789*************************999******987653355 PP AA3.hmm 127 ...kkliedevkl.ds.........tepqlngrriilprgkvlGGss 160 +k+ v+l d+ +++ +g++ii+prgk+lGGs+ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 48 aagRKF----VNLaDPsmgwadyshVQKNVSGKSIIYPRGKGLGGST 90 444222....111211333344443444499**************** PP AA3.hmm 161 linamvylrgqaedfdawaee.g.egwswddllpyfkkaeell.... 201 + namvy+ g+ e++d+wa+ g ++w+w + ++ fk++e + 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 91 MTNAMVYYVGSSEEYDYWADVtGcPKWRWPETKERFKRIEGFQddtp 137 **********************999***************9999999 PP AA3.hmm 202 .................................r............. 202 + 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 138 ieyrkyahpspenhgstgpvdvslpsvwesgvsKvfeiaqahgfpin 184 99998888888877777777666666666655505555555666666 PP AA3.hmm 203 .....................rrssaakayldplpa.pnleiltnar 227 r++aa+a+l++ + pnl+++t+a 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 185 ldqnsgnpigiglspstvshgLRTTAASAFLEN--RpPNLTVWTEAI 229 66777777778888888888899*******988..78********** PP AA3.hmm 228 vtkilf...........agtl.vaakeVilaaGaigspqlLllSgig 262 vt+ilf g+ +k il+aGa+ +p+lLllSgig 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 230 VTRILFsgrtavgvelaNGRKaHGTKATILCAGALDTPKLLLLSGIG 276 ******8887755444422444889********************** PP AA3.hmm 263 paee.eslgipvvvdlp.vgenlq....................... 284 p+++ lgi+vv+dlp vg+nlq 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 277 PKDDlVPLGIKVVHDLPgVGKNLQdhlqslietrlskklldrdvvrd 323 *********************************************** PP AA3.hmm 285 ............................................... 284 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 324 gepdtagqtwpclpfcflkveenleteefkqldpsmqeylkgktvpq 370 *********************************************** PP AA3.hmm 285 ...............................apks..svrlnssdpl 298 +p+s +vrl+s++p 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 371 lslgtaaplfarggrtfpdvsyyhvyvnclmNPQSrgEVRLRSANPQ 417 *******************************999999********** PP AA3.hmm 299 dpplidpnylsderdvellvegvr.....................ee 324 dpp +d+n ls++ d+++ + + ++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 418 DPPCFDFNALSHPYDLRAYINNTCkvmefiegeanssyfagyingPA 464 **********9975553333333344445556668888888877632 PP AA3.hmm 325 .etdd.....tree.iqtiyHpvGtcrmged.dasaVVdpnlrvhgv 363 ++d+ + + +H++G+ +mg++ ++ a+Vd++ rv g 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 465 sRSDEdiekwL-KAvSGPQFHATGSVMMGRPeNKLACVDADFRVLGL 510 22444678954.4449999**********888888************ PP AA3.hmm 364 enLrvvDasvfPtilggnpnltivaiaeraadlikkdn 401 enL+v+D sv+Pt++++ +++t+++iae aa+ +++++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 511 ENLYVADLSVCPTTPCCMTQSTAYMIAETAAETLIEKY 548 *********************************99986 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 157.2 0.0 1.4e-49 1.4e-49 2 451 .. 4 437 .. 3 455 .. 0.84 2 ! 45.7 0.0 8.5e-16 8.5e-16 510 587 .. 468 546 .. 463 549 .. 0.92 Alignments for each domain: == domain 1 score: 157.2 bits; conditional E-value: 1.4e-49 AA3_3.hmm 2 evDviiaGgGtagcvvagRlaeadpnLkvllvegGknnlddplvvkP 48 + D i++G+G+agc+ a+Rl+++ +vll+e+G n lddp++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRTSTAPSVLLIEAG-NVLDDPNLRAA 49 679********************************.57788888776 PP AA3_3.hmm 49 alflsnlk.pesktalfykaekseeldgRelivpaggvlGGGssinf 94 nl p+ a + ++ +++++g+++i p g+ lGG n 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 50 GRKFVNLAdPSMGWADY--SHVQKNVSGKSIIYPRGKGLGGSTMTNA 94 65555555044444444..55667899******************** PP AA3_3.hmm 95 lmYtraqasDfdsw....kteGWsakdllpllkkletyqgkg..... 132 ++Y ++++++d w + W + + k++e +q ++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 95 MVYYVGSSEEYDYWadvtGCPKWRWPETKERFKRIEGFQDDTpieyr 141 **************75555678**************99987767676 PP AA3_3.hmm 133 .....deevhGkeGPikvskGtytskrveddfleaaeelgipevdDl 174 + e hG++GP++vs ++ + ++++e a++ g+p D 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 142 kyahpSPENHGSTGPVDVSLPSVWES-GVSKVFEIAQAHGFPINLDQ 187 677777899***********999988.777899*********99996 PP AA3_3.hmm 175 qdletsngveralryvsrdGrRqDaAhaylhpklksgkkpnLhvlve 221 + + g+ vs +G R aA+a+l ++ pnL+v +e 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 188 NS-GNPIGIGLSPSTVS-HGLRTTAASAFLENR-----PPNLTVWTE 227 55.45558888887776.7**********9764.....699****** PP AA3_3.hmm 222 skvsrvlfenkravgvelvpnkafqkeaksksrtvkarklvvvsaGa 268 + v+r+lf ++ avgvel ++ + + k+ ++ aGa 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 228 AIVTRILFSGRTAVGVELANGRKAHGT-----------KATILCAGA 263 *****************9988776664...........57899**** PP AA3_3.hmm 269 lgtPlvLeRsGiGakevLekagvkvvvdlpgvGenyqDHklllvpyr 315 l tP++L sGiG k+ L +g+kvv dlpgvG+n+qDH l+ r 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 264 LDTPKLLLLSGIGPKDDLVPLGIKVVHDLPGVGKNLQDHLQSLIETR 310 ***************************************99999988 PP AA3_3.hmm 316 aalepsetldallrgrkdveealkekkgilgtngidvgvklRPteee 362 + ++ d + +g++d++ + + l ++ v l +ee 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 311 LS-KKLLDRDVVRDGEPDTA---GQTWPCLPFCFLKVEENLE--TEE 351 88.55556667777777765...4567888899999988885..799 PP AA3_3.hmm 363 vealgpeFkeawdrdfknkpdkplmllavvagflgdpslvpekkylt 409 ++l+p +e k k+ l l + + +f +++p+ y+ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 352 FKQLDPSMQEY----LKGKTVPQLSLGTAAPLFARGGRTFPDVSYYH 394 ******99865....45555555666666677777789999998887 PP AA3_3.hmm 410 l.saftayPysrGsihitspdpeeeidFetgflkdkaDlkklv 451 + + ++ P srG++ s++p++++ F+ l+++ Dl++ + 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 395 VyVNCLMNPQSRGEVRLRSANPQDPPCFDFNALSHPYDLRAYI 437 62578899*******************************9876 PP == domain 2 score: 45.7 bits; conditional E-value: 8.5e-16 AA3_3.hmm 510 daaiedwvrenvettWhslgtckma.prekggvvdkkLnvyGvegLk 555 d+ ie+w+++ + +h+ g++ m+ p +k + vd++ v G+e+L 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 468 DEDIEKWLKAVSGPQFHATGSVMMGrPENKLACVDADFRVLGLENLY 514 788*********************74677789*************** PP AA3_3.hmm 556 vaDlsivPenvgantnstallvGekaadiilk 587 vaDls++P ++ t+sta+++ e aa+ +++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 515 VADLSVCPTTPCCMTQSTAYMIAETAAETLIE 546 ***************************98886 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.3 0.0 1e-14 1e-14 14 141 .. 2 130 .. 1 140 [. 0.73 2 ! 44.1 0.0 2.9e-15 2.9e-15 194 322 .. 199 309 .. 183 320 .. 0.83 3 ! 50.0 0.0 5e-17 5e-17 407 545 .. 404 545 .. 383 547 .. 0.77 Alignments for each domain: == domain 1 score: 42.3 bits; conditional E-value: 1e-14 AA3_1.hmm 14 ketyDyivvGaGagGivvAdrLs..eagkkvLLlekGgpstyatggt 58 ++++D+ivvGaGa+G +A+rLs + +vLL+e G + ++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 2 SNQFDFIVVGAGAAGCLLASRLSrtSTAPSVLLIEAG--NVLDDPN- 45 579********************4344569*******..3444444. PP AA3_1.hmm 59 ekpewlentnltrfDvpglcneiladssgvactdtaqmagcvlGGgt 105 + + + + D + + + +++v + + g+ lGG+t 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 46 --LRAAGRKFVNLADPSMGWADYSHVQKNVSGKSIIYPRGKGLGGST 90 ..333223334444433344444455788999999999********* PP AA3_1.hmm 106 avNaglfvkpqasdfddkfp.....kgwksedvqdaadrvf 141 + Na++++ +++++d+ + w++ + ++ ++r+ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 91 MTNAMVYYVGSSEEYDY-WAdvtgcPKWRWPETKERFKRIE 130 *********99988873.33122226899999999999986 PP == domain 2 score: 44.1 bits; conditional E-value: 2.9e-15 AA3_1.hmm 194 pfmisngerggPlatYLpsAkkrsNfklilntkVkrvvrsggkvtGV 240 p +s+g r + +L++ +N + ++++ V+r+ sg +++GV 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 199 PSTVSHGLRTTAASAFLEN--RPPNLTVWTEAIVTRILFSGRTAVGV 243 6678899999999999985..789*********************** PP AA3_1.hmm 241 evessgGqrevikvtkggrVilsAGalsspkiLlrSGigpkdqlevv 287 e+ +G +k + +++ il AGal +pk+Ll SGigpkd l + 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 244 ELA--NG----RKAHGTKATILCAGALDTPKLLLLSGIGPKDDLVPL 284 **9..78....56678999*************************655 PP AA3_1.hmm 288 kasasdgvtliaksdwinlp.vGknlkdhpntdlki 322 +++++ +lp vGknl+dh + ++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 285 G------IKVVH-----DLPgVGKNLQDHLQSLIET 309 5......33222.....4433999999998887765 PP == domain 3 score: 50.0 bits; conditional E-value: 5e-17 AA3_1.hmm 407 tSrGrleitakg..ntvvskkpylsdaeDkeavaqfienliaalsaa 451 +SrG++++ ++ + + ls++ D +a+++ ++++ ++ + 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 404 QSRGEVRLRSANpqDPPCFDFNALSHPYDLRAYINNTCKVMEFIEGE 450 57777777765544333444455677778888887777777777664 PP AA3_1.hmm 452 sglt....lvspasnttvedlvksllvsvakrsanHwmgtaklGtdd 494 ++ + +++ ++ ++ed+ k l + + H +g+ +G 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 451 ANSSyfagYINGPASRSDEDIEKWL--KAVSGPQFHATGSVMMGR-P 494 4433111156889999999999999..56778889*********6.4 PP AA3_1.hmm 495 sggtsvvDlntkVyGtdNLfVvDASifpdlptgNpsaiimvaaekaa 541 +++ ++vD++++V G +NL+V+D S+ p++p ++++ ++ae aa 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 495 ENKLACVDADFRVLGLENLYVADLSVCPTTPCCMTQSTAYMIAETAA 541 999******************************************** PP AA3_1.hmm 542 ekil 545 e ++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 542 ETLI 545 9887 PP >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 3.9 0.0 0.0064 0.0064 3 37 .. 4 40 .. 2 66 .. 0.88 2 ! 16.5 0.0 9.3e-07 9.3e-07 227 322 .. 221 318 .. 198 354 .. 0.78 3 ! 25.8 0.0 1.5e-09 1.5e-09 464 531 .. 479 547 .. 457 548 .. 0.94 Alignments for each domain: == domain 1 score: 3.9 bits; conditional E-value: 0.0064 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvd..aglkvlmveiGaq 37 ++d +++G+G G+ A l + +vl++e G+ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 4 QFDFIVVGAGAAGCLLASRLSRtsTAPSVLLIEAGNV 40 79******************99656778*****9985 PP == domain 2 score: 16.5 bits; conditional E-value: 9.3e-07 AA3_4.hmm 227 kfeLltetrctkleldeskekkieaaevkdLlknkdllvkakvyvia 273 +++++te +t++ + ++ +e L + ++ + k+ +++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 221 NLTVWTEAIVTRILFSGRT---AVGVE---LANGRK-AHGTKATILC 260 6667777777777665532...22222...222222.2346889*** PP AA3_4.hmm 274 aGavltpqiLanSgfgke.........keellpaLgkylteqsmafc 311 aGa tp++L Sg+g + + lp +gk+l ++ ++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 261 AGALDTPKLLLLSGIGPKddlvplgikVVHDLPGVGKNLQDHLQSLI 307 ***************99999****99977899*************** PP AA3_4.hmm 312 qvvLkkelves 322 ++ L+k+l+++ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 308 ETRLSKKLLDR 318 ******99885 PP == domain 3 score: 25.8 bits; conditional E-value: 1.5e-09 AA3_4.hmm 464 pglalhitGttragk.dketsvvdenskvwgfknLyvGGngvIptaf 509 g ++h tG++ +g+ +++ ++vd++ +v g++nLyv+ +v pt+ 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 479 SGPQFHATGSVMMGRpENKLACVDADFRVLGLENLYVADLSVCPTTP 525 57789**********99999*************************** PP AA3_4.hmm 510 aaNPtlTsvafAikgaekivek 531 + T+ +A +ae+++ek 7829|Fonmu1_GeneCatalog_proteins_20160827.aa.fasta|AA3_2|AA3_2 526 CCMTQSTAYMIAETAAETLIEK 547 *****************99986 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (553 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 120.69 // [ok]