# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA3/fasta_for_each_cluster/cluster_166.txt # target HMM database: merged_hmms/AA3.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA3/AA3_cluster_166.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 1272866|Mycrub1_GeneCatalog_proteins_20170201.aa.fasta|AA3 [L=91] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.1e-23 69.7 0.0 8e-23 69.5 0.0 1.0 1 AA3_4.hmm 2.9e-11 30.7 0.0 3.1e-11 30.7 0.0 1.0 1 AA3.hmm 1.7e-09 25.1 0.0 2e-09 24.9 0.0 1.0 1 AA3_1.hmm Domain annotation for each model (and alignments): >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 69.5 0.0 4.8e-23 8e-23 3 57 .. 20 86 .. 18 90 .. 0.95 Alignments for each domain: == domain 1 score: 69.5 bits; conditional E-value: 4.8e-23 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvdaglkvlmveiGaqds............kvig 43 ++dv+i+GSGpiGatyA++lv+agl v+mv++Ga++s v+g 1272866|Mycrub1_GeneCatalog_proteins_20170201.aa.fasta|AA3 20 TFDVCIIGSGPIGATYAKLLVKAGLAVAMVDVGAATSftttkgkndediFVPG 72 69*********************************99**************** PP AA3_4.hmm 44 ehkkNeikyqkdid 57 hk+Nei+yqkd + 1272866|Mycrub1_GeneCatalog_proteins_20170201.aa.fasta|AA3 73 GHKRNEIEYQKDPN 86 ***********976 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.7 0.0 1.8e-11 3.1e-11 78 129 .. 9 65 .. 2 89 .. 0.74 Alignments for each domain: == domain 1 score: 30.7 bits; conditional E-value: 1.8e-11 AA3.hmm 78 rqkfeitlskeeyDvvivGsGaaGsvlAsrLsea..gvlllEaGeedlnee 126 + + +++++++++Dv+i+GsG++G+++A+ L++a v++++ G ++ + 1272866|Mycrub1_GeneCatalog_proteins_20170201.aa.fasta|AA3 9 KSQITFSAEEPTFDVCIIGSGPIGATYAKLLVKAglAVAMVDVGAATSFTT 59 6678999***************************8888******9987766 PP AA3.hmm 127 ...kkl 129 k++ 1272866|Mycrub1_GeneCatalog_proteins_20170201.aa.fasta|AA3 60 tkgKND 65 655222 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.9 0.0 1.2e-09 2e-09 10 56 .. 14 60 .. 5 69 .. 0.84 Alignments for each domain: == domain 1 score: 24.9 bits; conditional E-value: 1.2e-09 AA3_1.hmm 10 tpvaketyDyivvGaGagGivvAdrLseagkkvLLlekGgpstyatg 56 ++++ t+D+ ++G+G+ G + A+ L++ag v +++ G +++ t 1272866|Mycrub1_GeneCatalog_proteins_20170201.aa.fasta|AA3 14 FSAEEPTFDVCIIGSGPIGATYAKLLVKAGLAVAMVDVGAATSFTTT 60 567899*********************************98776553 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (91 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 4 (0.8); expected 0.1 (0.02) Passed Vit filter: 4 (0.8); expected 0.0 (0.001) Passed Fwd filter: 3 (0.6); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 3 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 92.13 // Query: 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 [L=586] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-212 696.0 0.0 1.3e-212 695.8 0.0 1.0 1 AA3_4.hmm 8.5e-44 138.2 0.0 1e-43 137.9 0.0 1.0 1 AA3.hmm 3.3e-24 73.6 0.1 9.6e-13 35.8 0.0 3.1 3 AA3_1.hmm 2.1e-22 67.9 0.0 1.7e-10 28.6 0.0 3.1 3 AA3_2.hmm 2.6e-09 24.3 0.1 2.4e-06 14.5 0.0 3.0 3 AA3_3.hmm Domain annotation for each model (and alignments): >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 695.8 0.0 1.3e-212 1.3e-212 3 530 .. 20 577 .. 18 579 .. 0.94 Alignments for each domain: == domain 1 score: 695.8 bits; conditional E-value: 1.3e-212 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvdaglkvlmveiGaqds...... 39 ++dv+i+GSGpiGatyA++lv+agl+v+mv+iGa++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 20 TFDVCIIGSGPIGATYAKLLVKAGLTVAMVDIGAAKGkndedi 62 69*******************************9977778888 PP AA3_4.hmm 40 kvigehkkNeikyqkdid.rfvkvikgalstvsvpvsktvv.. 79 v+g hk+Nei+yqk+ + rf+ +++alst+s+pv++ + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 63 FVPGGHKRNEIEYQKEPNaRFTYAVQAALSTLSIPVDNARMfi 105 9**************97538****************9853310 PP AA3_4.hmm 80 ptldpaawsa...p..kalvsngqnpkqkeeenLpaeavtrvV 117 + + + ++ + k +vsng+np+q+++ nL+++avtr+V 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 106 TYHAVGMLTRnarStdKPFVSNGMNPNQDAYLNLDSAAVTRAV 148 222222333345414599************************* PP AA3_4.hmm 118 GgmsthWtcatpepek.lersklfk....ddeewdklykeaek 155 GgmsthW c+tp+ k ler+ l + dd+ wd+ly+eae 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 149 GGMSTHWGCTTPRLVKgLERPLLDNdsskDDKLWDSLYTEAEG 191 **************888****999999999************* PP AA3_4.hmm 156 llgtsetefdesirhklvkktLekafkeekrevkslPLAckrr 198 ++gts+t+f++sir l++ tL++af++ r++ +lP+Ac+r 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 192 IIGTSTTQFKNSIRGLLIQATLSAAFPS--RTFGDLPVACHRL 232 **************************98..************9 PP AA3_4.hmm 199 kenkeyvewssaatilgdklsekkkkkekfeLltetrctklel 241 +n++y+ew++aatil+d++++ + ++++f+Ll++++c kl+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 233 -KNDRYLEWHAAATILKDIYEDAD-RRKNFKLLPNHQCIKLQA 273 .789**************998755.569*************99 PP AA3_4.hmm 242 deskekkieaaevkdLlknk......dllvkakvyviaaGavl 278 de k kie+a vkdLl+++ d ++ akv+v+aaGav+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 274 DE-KGYKIEKALVKDLLASRtdphcrDRFIAAKVFVVAAGAVG 315 88.4558***********6556677799*************** PP AA3_4.hmm 279 tpqiLanSgfgke.....keellpaLgkylteqsmafcqvvLk 316 tpqiL+nSgf+++ +++++p+Lg +lteq+++fcq+++k 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 316 TPQILFNSGFSGDsvntqSTSQIPNLGLFLTEQPVTFCQTIWK 358 **********99999999999********************** PP AA3_4.hmm 317 kelvesvkk....kpkewkeavkkhkkkhpkDplpiPfddpep 355 k+l++svk+ +p++w++a k h +k+++Dp+piPf+dp p 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 359 KSLLDSVKEaksqNPDWWTQASKYHAEKNSHDPIPIPFSDPPP 401 *******99888899**************************** PP AA3_4.hmm 356 qvtipvseerpwhtqIhr.DaFsygevgpkiDqRlvvDlrfFg 397 qv+ ++erpwh qI+r Da+s+g +g+++D+Rl+vD+rfFg 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 402 QVYNRPTKERPWHGQIQRdDAWSFGVFGDTVDHRLIVDFRFFG 444 ******************88*********************** PP AA3_4.hmm 398 kqepkeeNrvtFskkikDaygmPqptfefkrseedaeraqrmm 440 +++p +eNrv+F+++++DaygmPqptfef+ +++d+e++++m+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 445 MATPLRENRVIFTHEVRDAYGMPQPTFEFNLKDTDRENSNEML 487 ******************************************* PP AA3_4.hmm 441 kdmtevAsklGgylpgsepqfmepglalhitGttragkdkets 483 +dm++vAs++Gg+lpg+epqf++pg+alhi+Gttrag ++ +s 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 488 ADMCAVASRIGGFLPGAEPQFQKPGTALHIAGTTRAGLTSGDS 530 ******************************************* PP AA3_4.hmm 484 vvdenskvwgfknLyvGGngvIptafaaNPtlTsvafAikgae 526 vvd+n+kvw+f+nLy+GGngvI+tafa NPtlTs+a+Aik+a+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 531 VVDTNCKVWDFDNLYLGGNGVISTAFAGNPTLTSMAYAIKSAK 573 ******************************************* PP AA3_4.hmm 527 kive 530 +i+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 574 SIII 577 *985 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 137.9 0.0 1e-43 1e-43 78 401 .. 9 579 .. 2 585 .. 0.75 Alignments for each domain: == domain 1 score: 137.9 bits; conditional E-value: 1e-43 AA3.hmm 78 rqkfeitlskeeyDvvivGsGaaGsvlAsrLsea..gvlllEa 118 + + +++ +k+++Dv+i+GsG++G+++A+ L++a +v++++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 9 KSQITFSGEKPTFDVCIIGSGPIGATYAKLLVKAglTVAMVDI 51 567788999*************************9999***** PP AA3.hmm 119 Geedlnee..............kkliedevklds......... 138 G + +++ + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 52 GAAKGKNDedifvpgghkrneiE----------Yqkepnarft 84 *9864433555554443322220..........0222234556 PP AA3.hmm 139 ........................................... 138 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 85 yavqaalstlsipvdnarmfityhavgmltrnarstdkpfvsn 127 6666666666666666777777777777766666554333322 PP AA3.hmm 139 tepqlngrriil......prgkvlGGsslinamvylrgqaedf 175 + +n +++ + + + +GG s+++++++ r+ + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 128 G---MNPNQDAYlnldsaAVTRAVGGMSTHWGCTTPRLVKGLE 167 0...333333337777745899***********7666555444 PP AA3.hmm 176 ...dawaeegegwswddllpyfkkaeell.............. 201 ++++ +++++ + +ae + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 168 rplLDNDS---SKDDKLWDSLYTEAEGIIgtsttqfknsirgl 207 11122222...24445556789999988888888888877777 PP AA3.hmm 202 .............r................rrssaakayldp. 214 + + aa ++l+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 208 liqatlsaafpsrTfgdlpvachrlkndryLEWHAAATILKDi 250 7777666666655055556666667777777788999999996 PP AA3.hmm 215 lpa....pnleiltnarvtkilf........ag.......... 235 ++ +n+++l n + k++ + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 251 YEDadrrKNFKLLPNHQCIKLQAdekgykieKAlvkdllasrt 293 6656999****************99776665005556666666 PP AA3.hmm 236 ......tlvaakeVilaaGaigspqlLllSgigpaeeeslgip 272 +++aak +++aaGa+g+pq+L++Sg s++ + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 294 dphcrdRFIAAKVFVVAAGAVGTPQILFNSGFSG---DSVNTQ 333 66666456**********************7766...589999 PP AA3.hmm 273 vvvdlp.vgenlq.............................. 284 + ++p +g l 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 334 STSQIPnLGLFLTeqpvtfcqtiwkkslldsvkeaksqnpdww 376 9999999999999****************************** PP AA3.hmm 285 ........................................... 284 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 377 tqaskyhaeknshdpipipfsdpppqvynrptkerpwhgqiqr 419 *********************9999999999999999999999 PP AA3.hmm 285 .............................apkssvrlnss.dp 297 +++v + + ++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 420 ddawsfgvfgdtvdhrlivdfrffgmatpLRENRVIFTHEvRD 462 9999999999999999999999999997733445555555555 PP AA3.hmm 298 .ldpplidpnyl..sd..erdvellvegvr............. 322 +++p++++ ++ ++ e+ e+l++ + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 463 aYGMPQPTFEFNlkDTdrENSNEMLADMCAvasriggflpgae 505 59*****999998533232222222222223335556655533 PP AA3.hmm 323 eeetddtreeiqtiyHpvGtcrmgeddasaVVdpnlrvhgven 365 + ++ +t+ H +Gt+r g + ++VVd+n++v++++n 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 506 P-----QFQKPGTALHIAGTTRAGLTSGDSVVDTNCKVWDFDN 543 1.....23457899***************************** PP AA3.hmm 366 LrvvDasvfPtilggnpnltivaiaeraadlikkdn 401 L++ ++ v+ t+++gnp+lt +a a ++a+ i+ + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 544 LYLGGNGVISTAFAGNPTLTSMAYAIKSAKSIIIKL 579 ***************************888877655 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.2 0.1 4.1e-07 4.1e-07 13 51 .. 17 55 .. 5 68 .. 0.87 2 ! 16.9 0.0 5.2e-07 5.2e-07 211 283 .. 252 329 .. 243 348 .. 0.72 3 ! 35.8 0.0 9.6e-13 9.6e-13 477 545 .. 510 576 .. 456 579 .. 0.86 Alignments for each domain: == domain 1 score: 17.2 bits; conditional E-value: 4.1e-07 AA3_1.hmm 13 aketyDyivvGaGagGivvAdrLseagkkvLLlekGgps 51 +k t+D+ ++G+G+ G + A+ L++ag +v +++ G ++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 17 EKPTFDVCIIGSGPIGATYAKLLVKAGLTVAMVDIGAAK 55 6789******************************99765 PP == domain 2 score: 16.9 bits; conditional E-value: 5.2e-07 AA3_1.hmm 211 psAkkrsNfklilntkVkrvv..rsggkvtGVeve...ssgGq 248 ++A r+Nfkl n + ++ +g k+ v+ +s 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 252 EDADRRKNFKLLPNHQCIKLQadEKGYKIEKALVKdllASRTD 294 6789999999999999998875567777777777766633333 PP AA3_1.hmm 249 revi.kvtkggrVilsAGalsspkiLlrSGigpkdq 283 + + + +++ +++AGa+++p+iL++SG d+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 295 PHCRdRFIAAKVFVVAAGAVGTPQILFNSGFS-GDS 329 3333034478888*****************86.444 PP == domain 3 score: 35.8 bits; conditional E-value: 9.6e-13 AA3_1.hmm 477 akrsanHwmgtaklGtddsggtsvvDlntkVyGtdNLfVvDAS 519 ++ a H gt++ G ++g+svvD+n kV+ dNL+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 510 KPGTALHIAGTTRAGL--TSGDSVVDTNCKVWDFDNLYLGGNG 550 556789*********8..7************************ PP AA3_1.hmm 520 ifpdlptgNpsaiimvaaekaaekil 545 +++++ +gNp+ + m+ a k a+ i+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 551 VISTAFAGNPTLTSMAYAIKSAKSII 576 *******************9999987 PP >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.6 0.0 1.1e-05 1.1e-05 2 82 .. 20 103 .. 19 105 .. 0.86 2 ! 28.6 0.0 1.7e-10 1.7e-10 212 347 .. 249 387 .. 160 397 .. 0.78 3 ! 23.1 0.0 7.3e-09 7.3e-09 502 566 .. 512 576 .. 507 578 .. 0.96 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 1.1e-05 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsedpnvsVlviEaGgdeend.pl 43 ++D i+G+G G++ A+ L + + ++V+++ G + ++ ++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 20 TFDVCIIGSGPIGATYAKLLVK-AGLTVAMVDIGAAKGKNdED 61 79******************99.799********99988549* PP AA3_2.hmm 44 idvpglagsl...lgseldwnyttepqkglnnrsiklprGkv 82 i vpg + +++e + +t + q++l+ si++ +++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 62 IFVPGGHKRNeieYQKEPNARFTYAVQAALSTLSIPVDNARM 103 ****97776555677788999999999999999999988887 PP == domain 2 score: 28.6 bits; conditional E-value: 1.7e-10 AA3_2.hmm 212 ayldpvekrsnltvltnatvtkilfdstkkkatGVevtk.... 250 ++++ +r+n+++l n++ k++ d++++k++ v++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 249 DIYEDADRRKNFKLLPNHQCIKLQADEKGYKIEKALVKDllas 291 44567899*********************99999999999876 PP AA3_2.hmm 251 ..kdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeLekl 291 + + ++ a k +++aGa+++Pq+L SG +++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 292 rtDPHCRDRFIAAKVFVVAAGAVGTPQILFNSGFSG----DSV 330 533334778999********************9855....578 PP AA3_2.hmm 292 gIpvvvdlpgVGenLqDhllvpvsfevkepl.etldellsdpt 333 + + ++ p+ G L+++++++++ k++l +++e s++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 331 NTQSTSQIPNLGLFLTEQPVTFCQTIWKKSLlDSVKEAKSQNP 373 999**********************999998667776666656 PP AA3_2.hmm 334 vaaealaeylankt 347 ++++ +y+a+k+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 374 DWWTQASKYHAEKN 387 66677777877665 PP == domain 3 score: 23.1 bits; conditional E-value: 7.3e-09 AA3_2.hmm 502 stvyHpvGTcamgprekggVVDselrVyGvknLRVvDaSvfPl 544 t+ H +GT++ g + ++VVD++++V ++nL v+ + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 512 GTALHIAGTTRAGLTSGDSVVDTNCKVWDFDNLYLGGNGVIST 554 5889*************************************** PP AA3_2.hmm 545 lvsahtqatvyavAekaAdlIk 566 + +++++ t +a A k A+ I+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 555 AFAGNPTLTSMAYAIKSAKSII 576 ******************9985 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.7 0.0 0.018 0.018 3 56 .. 21 73 .. 19 94 .. 0.76 2 ! 14.5 0.0 2.4e-06 2.4e-06 210 283 .. 254 328 .. 239 363 .. 0.72 3 ! 4.2 0.1 0.003 0.003 523 586 .. 513 576 .. 509 580 .. 0.91 Alignments for each domain: == domain 1 score: 1.7 bits; conditional E-value: 0.018 AA3_3.hmm 3 vDviiaGgGtagcvvagRlaeadpnLkvllvegGk.nnlddplvv 46 Dv i+G+G g+ a l +a L v +v+ G+ + ++d+ ++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 21 FDVCIIGSGPIGATYAKLLVKAG--LTVAMVDIGAaKGKNDEDIF 63 79*****************9985..77888887761457888999 PP AA3_3.hmm 47 kPalflsnlk 56 P + +n 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 64 VPGGHKRNEI 73 9988877754 PP == domain 2 score: 14.5 bits; conditional E-value: 2.4e-06 AA3_3.hmm 210 sgkkpnLhvlveskvsrvlfenkravgve..lvpnkafqkeak 250 ++++n ++l +++ ++ ++k +e lv+ ++++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 254 ADRRKNFKLLPNHQCIKLQADEK-GYKIEkaLVKDLLASRTDP 295 35688999999999999998765.3444411333333333344 PP AA3_3.hmm 251 sksrtvkarklvvvsaGalgtPlvLeRsGiGak 283 + a k+ vv+aGa+gtP++L sG + 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 296 HCRDRFIAAKVFVVAAGAVGTPQILFNSGFSGD 328 444445566788899**************8554 PP == domain 3 score: 4.2 bits; conditional E-value: 0.003 AA3_3.hmm 523 ttWhslgtckmaprekggvvdkkLnvyGvegLkvaDlsivPen 565 t+ h gt++ + ++vvd++ +v+ ++L + ++ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 513 TALHIAGTTRAGLTSGDSVVDTNCKVWDFDNLYLGGNGVISTA 555 899**************************************** PP AA3_3.hmm 566 vgantnstallvGekaadiil 586 ++n + t ++ k+a+ i+ 1086603|Mycalb1_GeneCatalog_proteins_20180325.aa.fasta|AA3_4|AA3_4 556 FAGNPTLTSMAYAIKSAKSII 576 *****9999999999987555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (586 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 106.61 // Query: 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 [L=462] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.3e-166 541.6 0.0 1.2e-163 534.3 0.0 2.0 1 AA3_4.hmm 1.2e-32 101.4 0.0 1.5e-32 101.0 0.0 1.0 1 AA3.hmm 4.5e-17 50.1 0.2 4.2e-12 33.7 0.0 2.1 2 AA3_1.hmm 7.6e-15 42.9 0.0 8.2e-09 23.0 0.0 2.1 2 AA3_2.hmm 1.1e-06 15.7 0.1 7.4e-05 9.6 0.0 2.1 2 AA3_3.hmm Domain annotation for each model (and alignments): >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 534.3 0.0 1.2e-163 1.2e-163 99 531 .. 2 439 .. 1 440 [. 0.96 Alignments for each domain: == domain 1 score: 534.3 bits; conditional E-value: 1.2e-163 AA3_4.hmm 99 npkqkeeenLpaeavtrvVGgmsthWtcatpepek.lersklf 140 np+q+++ nL+ +avtr VGgmsthW c+tp+ k ler+ l 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 2 NPNQNAYLNLDVAAVTRIVGGMSTHWGCTTPRLVKgLERPLLS 44 9********************************888*****99 PP AA3_4.hmm 141 k....ddeewdklykeaekllgtsetefdesirhklvkktLek 179 + dd+ wd+ly+eae ++gts+t+f++sir l++ tL++ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 45 NdsseDDRLWDALYTEAEGIIGTSTTQFKTSIRGLLIQATLSA 87 99999999*********************************** PP AA3_4.hmm 180 afkeekrevkslPLAckrrkenkeyvewssaatilgdklsekk 222 af++ r++ +lP+Ac+r k+ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 88 AFPS--RTFGDLPVACHRLKKR--------------------- 107 **98..************8542..................... PP AA3_4.hmm 223 kkkekfeLltetrctkleldeskek........kieaaevkdL 257 +++f+L+++++c kle de++ k ie+a+vkdL 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 108 -PRKNFKLMPNHQCIKLEADETDYKmsssdlrhFIEKARVKDL 149 .2357************99999666666677767********* PP AA3_4.hmm 258 lknk......dllvkakvyviaaGavltpqiLanSgfgke... 291 l+++ d ++ akv+++aaGa++tpqiL+nSgf+++ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 150 LASRtdpdcrDRFIAAKVFIVAAGAIGTPQILFNSGFSGDsin 192 **5556677789*************************999999 PP AA3_4.hmm 292 ..keellpaLgkylteqsmafcqvvLkkelvesvkk....kpk 328 +++++p+Lg +lteq+++fcq++ kk+l++s+k+ kp+ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 193 aqSTSQIPNLGLFLTEQPVTFCQTICKKSLLDSIKEaepkKPD 235 99999*****************************99888888* PP AA3_4.hmm 329 ewkeavkkhkkkhpkDplpiPfddpepqvtipvseerpwhtqI 371 +w +a+k++ +k+++Dp+piPf+dp pqv++ ++erpwh qI 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 236 WWIQALKRQAEKNSHDPIPIPFSDPPPQVYYRPTKERPWHGQI 278 ******************************************* PP AA3_4.hmm 372 hr.DaFsygevgpkiDqRlvvDlrfFgkqepkeeNrvtFskki 413 +r Da+s+g++g+++D+Rl+vD+rfFg+++p ++NrvtF++k+ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 279 QRdDAWSFGAFGDTVDNRLIVDFRFFGMATPLRKNRVTFTHKC 321 **88*************************************** PP AA3_4.hmm 414 kDaygmPqptfefkrseedaeraqrmmkdmtevAsklGgylpg 456 +DaygmPq+tfef+ +++d+e++++m++dm++vAs++Gg+lpg 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 322 RDAYGMPQATFEFDLKDTDRENSNEMLADMCAVASRIGGFLPG 364 ******************************************* PP AA3_4.hmm 457 sepqfmepglalhitGttragkdketsvvdenskvwgfknLyv 499 +epqf++pg+alhi+Gttrag ++ +svvd+++kvw+f+nLy+ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 365 AEPQFQKPGTALHIAGTTRAGLNSGDSVVDTDCKVWKFDNLYL 407 ******************************************* PP AA3_4.hmm 500 GGngvIptafaaNPtlTsvafAikgaekivek 531 GGngvI+tafa NPtlTs+a+Aik+a++i++k 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 408 GGNGVISTAFAGNPTLTSIAYAIKSAKSIITK 439 *****************************987 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 101.0 0.0 1.5e-32 1.5e-32 152 405 .. 16 444 .. 2 454 .. 0.77 Alignments for each domain: == domain 1 score: 101.0 bits; conditional E-value: 1.5e-32 AA3.hmm 152 rgkvlGGsslinamvylrgqaedfdawaee...g.egwswddl 190 +++GG s+++++++ r+ + + + + +++ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 16 VTRIVGGMSTHWGCTTPRLVKGLER----PllsNdSSEDDRLW 54 6789999999999965555444441....12221122333444 PP AA3.hmm 191 lpyfkkaeell................................ 201 + +ae + 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 55 DALYTEAEGIIgtsttqfktsirglliqatlsaafpsrtfgdl 97 5567888877777777777777766666666655555444443 PP AA3.hmm 202 r..rrssaakayldplpapnleiltnarvtkilf......... 233 + + l+++p++n++++ n + k++ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 98 PvaC------HRLKKRPRKNFKLMPNHQCIKLEAdetdykmss 134 1332......33444556****************988877766 PP AA3.hmm 234 .......ag.................tlvaakeVilaaGaigs 252 ++ +++aak +i+aaGaig+ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 135 sdlrhfiEKarvkdllasrtdpdcrdRFIAAKVFIVAAGAIGT 177 6555555005566666666666666446*************** PP AA3.hmm 253 pqlLllSgigpaeeeslgipvvvdlp.vgenlq.......... 284 pq+L++Sg s + ++ ++p +g l 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 178 PQILFNSGFSG---DSINAQSTSQIPnLGLFLTeqpvtfcqti 217 *******7777...5788888889999999999********** PP AA3.hmm 285 ........................................... 284 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 218 ckkslldsikeaepkkpdwwiqalkrqaeknshdpipipfsdp 260 ******************************************* PP AA3.hmm 285 ........................................... 284 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 261 ppqvyyrptkerpwhgqiqrddawsfgafgdtvdnrlivdfrf 303 ******************************************* PP AA3.hmm 285 ......apkssvrlnss.dp.ldpplidpnyl..sd..erdve 315 k++v+ + + ++ +++p+ ++ + ++ e+ e 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 304 fgmatpLRKNRVTFTHKcRDaYGMPQATFEFDlkDTdrENSNE 346 ***987556688888888777**********985332322222 PP AA3.hmm 316 llvegvr.............eeetddtreeiqtiyHpvGtcrm 345 +l++ + + ++ +t+ H +Gt+r 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 347 MLADMCAvasriggflpgaeP-----QFQKPGTALHIAGTTRA 384 222222233355566555331.....23457899********* PP AA3.hmm 346 geddasaVVdpnlrvhgvenLrvvDasvfPtilggnpnltiva 388 g ++ ++VVd++++v+ ++nL++ ++ v+ t+++gnp+lt +a 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 385 GLNSGDSVVDTDCKVWKFDNLYLGGNGVISTAFAGNPTLTSIA 427 ******************************************* PP AA3.hmm 389 iaeraadlikkdngkql 405 a ++a+ i+ + + ++ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 428 YAIKSAKSIITKLQTNP 444 *****999999887765 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.5 0.0 2.7e-06 2.7e-06 258 285 .. 166 192 .. 161 209 .. 0.79 2 ! 33.7 0.0 4.2e-12 4.2e-12 477 546 .. 371 438 .. 315 440 .. 0.86 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 2.7e-06 AA3_1.hmm 258 grVilsAGalsspkiLlrSGigpkdqle 285 + i++AGa+++p+iL++SG d+++ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 166 KVFIVAAGAIGTPQILFNSGFS-GDSIN 192 5569****************86.45554 PP == domain 2 score: 33.7 bits; conditional E-value: 4.2e-12 AA3_1.hmm 477 akrsanHwmgtaklGtddsggtsvvDlntkVyGtdNLfVvDAS 519 ++ a H gt++ G ++g+svvD++ kV+ dNL+ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 371 KPGTALHIAGTTRAGL--NSGDSVVDTDCKVWKFDNLYLGGNG 411 556789*********8..7************************ PP AA3_1.hmm 520 ifpdlptgNpsaiimvaaekaaekila 546 +++++ +gNp+ + ++ a k a+ i+ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 412 VISTAFAGNPTLTSIAYAIKSAKSIIT 438 ********************9999986 PP >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.9 0.0 2.9e-07 2.9e-07 219 322 .. 108 222 .. 101 249 .. 0.71 2 ! 23.0 0.0 8.2e-09 8.2e-09 502 566 .. 373 437 .. 368 439 .. 0.95 Alignments for each domain: == domain 1 score: 17.9 bits; conditional E-value: 2.9e-07 AA3_2.hmm 219 krsnltvltnatvtkilfdstk..............kkatGVe 247 r+n++++ n++ k+ d+t+ ++++ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 108 PRKNFKLMPNHQCIKLEADETDykmsssdlrhfiekARVKDLL 150 5788888888888888888888666666666444333333333 PP AA3_2.hmm 248 vtk.kdgkkytvkarkEVILsaGainsPqlLmlSGiGpkeeLe 289 ++ + + ++ a k I++aGai++Pq+L SG + 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 151 ASRtDPDCRDRFIAAKVFIVAAGAIGTPQILFNSGFSG----D 189 333323347778999999****************9854....4 PP AA3_2.hmm 290 klgIpvvvdlpgVGenLqDhllvpvsfevkepl 322 +++ + ++ p+ G L+++++++++ +k++l 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 190 SINAQSTSQIPNLGLFLTEQPVTFCQTICKKSL 222 678888888899999999999998888888774 PP == domain 2 score: 23.0 bits; conditional E-value: 8.2e-09 AA3_2.hmm 502 stvyHpvGTcamgprekggVVDselrVyGvknLRVvDaSvfPl 544 t+ H +GT++ g ++ ++VVD++++V ++nL v+ + 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 373 GTALHIAGTTRAGLNSGDSVVDTDCKVWKFDNLYLGGNGVIST 415 5889*************************************** PP AA3_2.hmm 545 lvsahtqatvyavAekaAdlIk 566 + +++++ t +a A k A+ I+ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 416 AFAGNPTLTSIAYAIKSAKSII 437 ******************9997 PP >> AA3_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 9.6 0.0 7.4e-05 7.4e-05 254 282 .. 161 188 .. 142 230 .. 0.83 2 ! 4.1 0.1 0.0034 0.0034 523 589 .. 374 440 .. 370 441 .. 0.93 Alignments for each domain: == domain 1 score: 9.6 bits; conditional E-value: 7.4e-05 AA3_3.hmm 254 rtvkarklvvvsaGalgtPlvLeRsGiGa 282 r++ a k+ +v+aGa+gtP++L sG 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 161 RFI-AAKVFIVAAGAIGTPQILFNSGFSG 188 444.55788899*************9754 PP == domain 2 score: 4.1 bits; conditional E-value: 0.0034 AA3_3.hmm 523 ttWhslgtckmaprekggvvdkkLnvyGvegLkvaDlsivPen 565 t+ h gt++ + + ++vvd++ +v+ ++L + ++ 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 374 TALHIAGTTRAGLNSGDSVVDTDCKVWKFDNLYLGGNGVISTA 416 899**************************************** PP AA3_3.hmm 566 vgantnstallvGekaadiilkeL 589 ++n + t ++ k+a+ i+ L 2677031|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 417 FAGNPTLTSIAYAIKSAKSIITKL 440 ********9999999998887665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (462 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 5 (1); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 5 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 76.63 // Query: 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 [L=539] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-147 481.4 0.0 4.5e-93 301.4 0.0 3.3 2 AA3_4.hmm 2.7e-25 77.1 0.0 3.9e-25 76.6 0.0 1.2 1 AA3.hmm 7.7e-13 36.1 0.1 1.3e-11 32.1 0.0 2.6 3 AA3_1.hmm 5e-10 27.0 0.0 1.4e-08 22.2 0.0 2.1 2 AA3_2.hmm Domain annotation for each model (and alignments): >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 174.5 0.0 9.9e-55 1.2e-54 13 253 .. 24 281 .. 23 282 .. 0.88 2 ! 301.4 0.0 3.6e-93 4.5e-93 277 531 .. 277 521 .. 275 522 .. 0.95 Alignments for each domain: == domain 1 score: 174.5 bits; conditional E-value: 9.9e-55 AA3_4.hmm 13 piGatyArtlvdaglkvlmveiGaqds............kvig 43 piGatyA++lv+agl+v+mv+iGa++s v+g 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 24 PIGATYAKLLVKAGLTVAMVDIGAATSftttkgkndediFVPG 66 9************************99**************** PP AA3_4.hmm 44 ehkkNeikyqk.......didrfvkvi................ 63 hk+Ne +++k 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 67 GHKRNESNTRKiqmpalhM-------Llmlspqrstvsrlmrk 102 **********965554440.......33444555555555566 PP AA3_4.hmm 64 ........kgalstvsvpvsktvvptldpaawsa......p.. 90 ++alstvs+pv+++ +p+ p+aws+ p 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 103 pevelkacRAALSTVSIPVDNVRIPNEPPDAWSKnvhphiPtd 145 67777777*************************9888766267 PP AA3_4.hmm 91 kalvsngqnpkqkeeenLpaeavtrvVGgmsthWtcatpepek 133 k +vsng+np+q+++ nL+a+avtrvVGg 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 146 KPFVSNGMNPNQNAYLNLDAAAVTRVVGG-------------- 174 99***************************.............. PP AA3_4.hmm 134 lersklfkddeewdklykeaekllgtsetefdesirhklvkkt 176 d++ wd+ly+eae ++g+s+t+f++sir l++ t 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 175 --------DNKLWDALYTEAEGIIGMSTTQFKNSIRGLLIQAT 209 ........4789******************************* PP AA3_4.hmm 177 LekafkeekrevkslPLAckrrkenkeyvewssaatilgdkls 219 L++af++ r++++lP+Ac+r +n++y+ew++aatil+d+++ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 210 LSAAFPS--RTFADLPVACHRL-KNDRYLEWHAAATILKDIYE 249 *****98..************9.789**************888 PP AA3_4.hmm 220 ekkkkkekfeLltetrctkleldeskekkieaae 253 + ++++f+Llt+++c kle+de+ + kie+a+ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 250 NA-DQRKNFKLLTNHQCIKLETDET-DYKIEKAR 281 65.4669*************99985.55688876 PP == domain 2 score: 301.4 bits; conditional E-value: 3.6e-93 AA3_4.hmm 277 vltpqiLanSgfgke.....keellpaLgkylteqsmafcqvv 314 + + iL+nSgf+++ +++++p+Lg +lteq+++fcq++ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 277 IEKARILFNSGFSGDsinaqSTSQIPNLGLFLTEQPVTFCQTI 319 66789*******99999999999******************** PP AA3_4.hmm 315 LkkelvesvkkkpkewkeavkkhkkkhpkDplpiPfddpepqv 357 +kk+l++s+kk + pk p +dp pq+ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 320 WKKSLLDSIKKAE--------------PKKPTGGRRQDPAPQI 348 *********8754..............566677778999**** PP AA3_4.hmm 358 tipvseerpwhtqIhr.DaFsygevgpkiDqRlvvDlrfFgkq 399 +++ ++ + +I+r Da+s+g++g+++D+Rl+vD+rfFg++ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 349 YYKPRK--SVRGMIQRdDAWSFGAFGDTVDNRLIVDFRFFGMA 389 976655..5689999978************************* PP AA3_4.hmm 400 epkeeNrvtFskkikDaygmPqptfefkrseedaeraqrmmkd 442 +p ++NrvtF+++++DaygmPqptfef+ +++d+e++++m++d 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 390 TPLRKNRVTFTHEYRDAYGMPQPTFEFDLKDTDRENSNEMLAD 432 ******************************************* PP AA3_4.hmm 443 mtevAsklGgylpgsepqfmepglalhitGttragkdketsvv 485 m++vAs++Gg+lpg+epqf++pg+alhi+Gttrag ++ +svv 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 433 MCAVASRIGGFLPGAEPQFQKPGTALHIAGTTRAGLTSGDSVV 475 ******************************************* PP AA3_4.hmm 486 denskvwgfknLyvGGngvIptafaaNPtlTsvafAikgaeki 528 d+++kvw+f+nLy+GGngvI+tafa NPtlTs+a+Aik+a++i 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 476 DTDCKVWKFDNLYLGGNGVISTAFAGNPTLTSIAYAIKSAKSI 518 ******************************************* PP AA3_4.hmm 529 vek 531 ++k 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 519 ITK 521 987 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 76.6 0.0 3.1e-25 3.9e-25 100 411 .. 25 532 .. 22 538 .. 0.69 Alignments for each domain: == domain 1 score: 76.6 bits; conditional E-value: 3.1e-25 AA3.hmm 100 aGsvlAsrLsea..gvlllEaGeedlnee.......kklied. 132 +G+++A+ L++a +v++++ G ++ + + i++ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 25 IGATYAKLLVKAglTVAMVDIGAATSFTTtkgkndeD--IFVp 65 7999999999999988999999998777777744330..2224 PP AA3.hmm 133 .evkl.ds................................... 138 ++k +s 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 66 gGHKRnESntrkiqmpalhmllmlspqrstvsrlmrkpevelk 108 3122221123444445566666666667766666666666666 PP AA3.hmm 139 ......................tepqlngrriil......... 150 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 109 acraalstvsipvdnvripnepP----------Dawsknvhph 141 66666666666666555554220..........0222222223 PP AA3.hmm 151 .........................prgkvlGGsslinamvyl 168 + +v+GG+ + + 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 142 iptdkpfvsngmnpnqnaylnldaaAVTRVVGGDNKLWDA--- 181 3333333333333333333444442244555555544444... PP AA3.hmm 169 rgqaedfdawaeegegwswddllpyfkkaeell.......... 201 + +ae + 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 182 ------------------------LYTEAEGIIgmsttqfkns 200 ........................2333333334444444444 PP AA3.hmm 202 ...................r..............rrssaakay 211 + + aa ++ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 201 irglliqatlsaafpsrtfAdlpvachrlkndryLEWHAAATI 243 4444455555555554444044444555555666667778888 PP AA3.hmm 212 ldp.lpa....pnleiltnarvtkilf.agtlvaakeVilaaG 248 l+ + +n+++ltn + k+++ + + 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 244 LKDiYENadqrKNFKLLTNHQCIKLETdE-----------TDY 275 88755534789***************983...........355 PP AA3.hmm 249 aigspqlLllSgigpaeeeslgipvvvdlp.vgenlq...... 284 i+ +++L++Sg s + ++ ++p +g l 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 276 KIEKARILFNSGFSG---DSINAQSTSQIPnLGLFLTeqpvtf 315 89*********7777...5788888889999999999****** PP AA3.hmm 285 ........................................... 284 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 316 cqtiwkkslldsikkaepkkptggrrqdpapqiyykprksvrg 358 ******************************************* PP AA3.hmm 285 .................................apkssvrlns 294 k++v+ + 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 359 miqrddawsfgafgdtvdnrlivdfrffgmatpLRKNRVTFTH 401 ******************************9884466888887 PP AA3.hmm 295 s.dp.ldpplidpnyl..sd..erdvellvegvr......... 322 + ++ +++p++++ + ++ e+ e+l++ + 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 402 EyRDaYGMPQPTFEFDlkDTdrENSNEMLADMCAvasriggfl 444 77666**********9853323222222222222333555665 PP AA3.hmm 323 ....eeetddtreeiqtiyHpvGtcrmgeddasaVVdpnlrvh 361 + ++ +t+ H +Gt+r g + ++VVd++++v+ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 445 pgaeP-----QFQKPGTALHIAGTTRAGLTSGDSVVDTDCKVW 482 55331.....23457899************************* PP AA3.hmm 362 gvenLrvvDasvfPtilggnpnltivaiaeraadlikkdngkq 404 ++nL++ ++ v+ t+++gnp+lt +a a ++a+ i+ + + + 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 483 KFDNLYLGGNGVISTAFAGNPTLTSIAYAIKSAKSIITKLQTK 525 ************************************9999988 PP AA3.hmm 405 lyerhvi 411 + h + 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 526 PDPGHKP 532 8776665 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.3 0.0 0.13 0.17 28 55 .. 26 53 .. 24 68 .. 0.83 2 ? 0.2 0.0 0.047 0.059 211 230 .. 249 268 .. 241 274 .. 0.83 3 ! 32.1 0.0 1e-11 1.3e-11 477 546 .. 453 520 .. 409 522 .. 0.88 Alignments for each domain: == domain 1 score: -1.3 bits; conditional E-value: 0.13 AA3_1.hmm 28 GivvAdrLseagkkvLLlekGgpstyat 55 G + A+ L++ag +v +++ G +++ t 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 26 GATYAKLLVKAGLTVAMVDIGAATSFTT 53 78899****************8876655 PP == domain 2 score: 0.2 bits; conditional E-value: 0.047 AA3_1.hmm 211 psAkkrsNfklilntkVkrv 230 ++A +r+Nfkl +n + ++ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 249 ENADQRKNFKLLTNHQCIKL 268 689***********998876 PP == domain 3 score: 32.1 bits; conditional E-value: 1e-11 AA3_1.hmm 477 akrsanHwmgtaklGtddsggtsvvDlntkVyGtdNLfVvDAS 519 ++ a H gt++ G ++g+svvD++ kV+ dNL+ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 453 KPGTALHIAGTTRAGL--TSGDSVVDTDCKVWKFDNLYLGGNG 493 456789*********8..7************************ PP AA3_1.hmm 520 ifpdlptgNpsaiimvaaekaaekila 546 +++++ +gNp+ + ++ a k a+ i+ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 494 VISTAFAGNPTLTSIAYAIKSAKSIIT 520 ********************9999986 PP >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 2.7 0.0 0.009 0.011 212 244 .. 246 278 .. 149 297 .. 0.76 2 ! 22.2 0.0 1.1e-08 1.4e-08 502 566 .. 455 519 .. 450 521 .. 0.96 Alignments for each domain: == domain 1 score: 2.7 bits; conditional E-value: 0.009 AA3_2.hmm 212 ayldpvekrsnltvltnatvtkilfdstkkkat 244 ++++ +r+n+++ltn++ k+ d+t++k++ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 246 DIYENADQRKNFKLLTNHQCIKLETDETDYKIE 278 44567899******************9985554 PP == domain 2 score: 22.2 bits; conditional E-value: 1.1e-08 AA3_2.hmm 502 stvyHpvGTcamgprekggVVDselrVyGvknLRVvDaSvfPl 544 t+ H +GT++ g + ++VVD++++V ++nL v+ + 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 455 GTALHIAGTTRAGLTSGDSVVDTDCKVWKFDNLYLGGNGVIST 497 5889*************************************** PP AA3_2.hmm 545 lvsahtqatvyavAekaAdlIk 566 + +++++ t +a A k A+ I+ 1910815|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 498 AFAGNPTLTSIAYAIKSAKSII 519 ******************9997 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (539 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 5 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (0.8); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.01s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 77.77 // Query: 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 [L=596] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.9e-188 615.5 0.0 3.8e-188 615.1 0.0 1.0 1 AA3_4.hmm 5.7e-32 99.2 0.0 7.7e-32 98.7 0.0 1.1 1 AA3.hmm 3.3e-17 50.6 0.1 4.2e-10 27.1 0.0 2.5 2 AA3_1.hmm 1.8e-09 25.2 0.0 1.3e-06 15.8 0.0 3.0 3 AA3_2.hmm Domain annotation for each model (and alignments): >> AA3_4.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 615.1 0.0 3.1e-188 3.8e-188 3 523 .. 20 569 .. 18 575 .. 0.94 Alignments for each domain: == domain 1 score: 615.1 bits; conditional E-value: 3.1e-188 AA3_4.hmm 3 evdvliaGSGpiGatyArtlvdaglkvlmveiGaqds...... 39 ++dv+i+GSGpiGatyA++lv+agl+v+mv+iGa++s 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 20 TFDVCIIGSGPIGATYAKLLVKAGLTVAMVDIGAATSftttkg 62 69*********************************99****** PP AA3_4.hmm 40 ......kvigehkkNeikyqkdid.rfvkvi............ 63 v+g hk+Nei+yqkd + rf+ v+ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 63 kndediFVPGGHKRNEIEYQKDPNaRFTYVVqvgrlmrkpeve 105 **********************863798888999999999888 PP AA3_4.hmm 64 kgalstvsvpvsktvvptldpaawsapkalvsngqnpkqkeee 106 a++++s+ ++ ++ l+++a s+ k +vsng+np+q+++ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 106 LKACRPLSIQYRSRSTTMLTRNAHSTDKPFVSNGMNPNQDAYL 148 678999*******99999999999999**************** PP AA3_4.hmm 107 nLpaeavtrvVGgmsthWtcatpepek.lersklfk....dde 144 nL+a+avtrvVGgmsthW c+tp+ k ler+ l + dd+ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 149 NLDAAAVTRVVGGMSTHWGCTTPRLVKgLERPLLDNnsskDDT 191 *************************888****9998999999* PP AA3_4.hmm 145 ewdklykeaekllgtsetefdesirhklvkktLekafkeekre 187 wd+ly+eae ++gts+t+f++sir l++ tL++af++ r+ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 192 LWDALYTEAEGIIGTSTTQFKNSIRGLLIQATLSAAFPS--RT 232 *************************************98..** PP AA3_4.hmm 188 vkslPLAckrrkenkeyvewssaatilgdklsekkkkkekfeL 230 +++lP+Ac+r +n++y+ew++aatil+d++++ + +++kf+L 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 233 FADLPVACHRL-KNDRYLEWHAAATILKDIYEDAD-QRKKFKL 273 **********9.789**************998755.569**** PP AA3_4.hmm 231 ltetrctkleldeskekkieaaevkdLlknkdllvkakvyvia 273 lt+++c kle+de ++ kie+a+v+dLl++++ + ++ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 274 LTNHQCIKLETDE-TDYKIEKARVRDLLASRTDPDLRDRFIA- 314 *********9998.4568***********8755444566664. PP AA3_4.hmm 274 aGavltpqiLanSgfgke.....keellpaLgkylteqsmafc 311 ++iL+nSgf+++ +++++p+Lg +lteq+++fc 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 315 ------AKILFNSGFSGDsinaqSTSQIPNLGLFLTEQPVTFC 351 ......48*******99999999999***************** PP AA3_4.hmm 312 qvvLkkelvesvkk....kpkewkeavkkhkkkhpkDplpiPf 350 q+++kk+l++s+kk kp++w++avk+h +kh++Dp+pi 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 352 QTIWKKSLLDSIKKaepkKPDWWTQAVKHHAEKHSQDPIPIHS 394 ************99988888******************99988 PP AA3_4.hmm 351 ddpepqvti.pvseerpwhtqIhr.DaFsygevgpkiDqRlvv 391 ++ + p ++erpwh qI+r Da+s+g++g+++D+Rl+v 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 395 RELLVIPYHpPPTKERPWHGQIQRdDAWSFGAFGDTVDNRLIV 437 88754433314579**********88***************** PP AA3_4.hmm 392 DlrfFgkqepkeeNrvtFskkikDaygmPqptfefkrseedae 434 D+rfFg+++p ++NrvtF++k++DaygmPqptfef+ +++d+e 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 438 DFRFFGMATPLRKNRVTFTHKCRDAYGMPQPTFEFDLKDTDRE 480 ******************************************* PP AA3_4.hmm 435 raqrmmkdmtevAsklGgylpgsepqfmepglalhitGttrag 477 ++++m++dm++vAs++Gg+lpg+epqf++pg+alhi+Gttrag 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 481 NSNEMLADMCAVASRIGGFLPGAEPQFQKPGTALHIAGTTRAG 523 ******************************************* PP AA3_4.hmm 478 kdketsvvdenskvwgfknLyvGGngvIptafaaNPtlTsvaf 520 ++ +svvd+++kvw+f+nLy+GGngvI+tafa NPtlTs+a+ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 524 LTSGDSVVDTDCKVWKFDNLYLGGNGVISTAFAGNPTLTSIAY 566 ******************************************* PP AA3_4.hmm 521 Aik 523 Ai+ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 567 AIN 569 *96 PP >> AA3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 98.7 0.0 6.2e-32 7.7e-32 78 391 .. 9 568 .. 2 581 .. 0.75 Alignments for each domain: == domain 1 score: 98.7 bits; conditional E-value: 6.2e-32 AA3.hmm 78 rqkfeitlskeeyDvvivGsGaaGsvlAsrLsea..gvlllEa 118 + + +++++k+++Dv+i+GsG++G+++A+ L++a +v++++ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 9 KSQITFSAEKPTFDVCIIGSGPIGATYAKLLVKAglTVAMVDI 51 5678999***************************9999***** PP AA3.hmm 119 Geedlnee.......kklied.........evklds....... 138 G ++ + + i++ e 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 52 GAATSFTTtkgkndeD--IFVpgghkrneiE----Yqkdpnar 88 **99887788854330..2224333333322....03333567 PP AA3.hmm 139 ........................................... 138 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 89 ftyvvqvgrlmrkpevelkacrplsiqyrsrsttmltrnahst 131 7777777778877777777777777777766666665555544 PP AA3.hmm 139 tepqlngrriil....................prgkvlGGssl 161 + +v+GG s+ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 132 D----------KpfvsngmnpnqdaylnldaaAVTRVVGGMST 164 1..........044444444444555888885599******** PP AA3.hmm 162 inamvylrgqaedfdawaee...g.egwswddllpyfkkaeel 200 ++++++ r+ + + + +++++ + +ae 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 165 HWGCTTPRLVKGLER----PlldNnSSKDDTLWDALYTEAEGI 203 ****86665555442....122221234455566788898888 PP AA3.hmm 201 l...........................r.............. 202 + + 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 204 IgtsttqfknsirglliqatlsaafpsrTfadlpvachrlknd 246 8888888888777777777666666655055556666667777 PP AA3.hmm 203 ..rrssaakayldp.lpa....pnleiltnarvtkilf..... 233 + aa ++l+ ++ +++++ltn + k+++ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 247 ryLEWHAAATILKDiYEDadqrKKFKLLTNHQCIKLETdetdy 289 777788999999996665699999**************98887 PP AA3.hmm 234 ......ag......tl.vaakeVilaaGaigspqlLllSgigp 263 + t ++ +i a ++L++Sg 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 290 kiekarVRdllasrTDpDLRDRFIAA-------KILFNSGFSG 325 76655500555554233345556655.......9999997766 PP AA3.hmm 264 aeeeslgipvvvdlp.vgenlq..................... 284 s + ++ ++p +g l 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 326 ---DSINAQSTSQIPnLGLFLTeqpvtfcqtiwkkslldsikk 365 ...47777788889999999989******************** PP AA3.hmm 285 ........................................... 284 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 366 aepkkpdwwtqavkhhaekhsqdpipihsrellvipyhppptk 408 ******************************************* PP AA3.hmm 285 .......................................apks 288 k+ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 409 erpwhgqiqrddawsfgafgdtvdnrlivdfrffgmatpLRKN 451 ************************************9885566 PP AA3.hmm 289 svrlnss.dp.ldpplidpnyl..sd..erdvellvegvr... 322 +v+ + + ++ +++p++++ + ++ e+ e+l++ + 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 452 RVTFTHKcRDaYGMPQPTFEFDlkDTdrENSNEMLADMCAvas 494 88888888777***********853323222222222222333 PP AA3.hmm 323 ..........eeetddtreeiqtiyHpvGtcrmgeddasaVVd 355 + ++ +t+ H +Gt+r g + ++VVd 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 495 riggflpgaeP-----QFQKPGTALHIAGTTRAGLTSGDSVVD 532 55566555331.....23457899******************* PP AA3.hmm 356 pnlrvhgvenLrvvDasvfPtilggnpnltivaiae 391 ++++v+ ++nL++ ++ v+ t+++gnp+lt +a a 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 533 TDCKVWKFDNLYLGGNGVISTAFAGNPTLTSIAYAI 568 *******************************99885 PP >> AA3_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.7 0.1 2.8e-08 3.5e-08 10 55 .. 14 59 .. 5 68 .. 0.84 2 ! 27.1 0.0 3.3e-10 4.2e-10 477 537 .. 509 567 .. 459 572 .. 0.86 Alignments for each domain: == domain 1 score: 20.7 bits; conditional E-value: 2.8e-08 AA3_1.hmm 10 tpvaketyDyivvGaGagGivvAdrLseagkkvLLlekGgpstya 54 +++k t+D+ ++G+G+ G + A+ L++ag +v +++ G +++ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 14 FSAEKPTFDVCIIGSGPIGATYAKLLVKAGLTVAMVDIGAATSFT 58 467899*********************************887765 PP AA3_1.hmm 55 t 55 t 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 59 T 59 5 PP == domain 2 score: 27.1 bits; conditional E-value: 3.3e-10 AA3_1.hmm 477 akrsanHwmgtaklGtddsggtsvvDlntkVyGtdNLfVvDAS 519 ++ a H gt++ G ++g+svvD++ kV+ dNL+ 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 509 KPGTALHIAGTTRAGL--TSGDSVVDTDCKVWKFDNLYLGGNG 549 456789*********8..7************************ PP AA3_1.hmm 520 ifpdlptgNpsaiimvaa 537 +++++ +gNp+ + ++ a 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 550 VISTAFAGNPTLTSIAYA 567 **********99876655 PP >> AA3_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 4.7 0.0 0.0022 0.0027 2 39 .. 20 56 .. 19 89 .. 0.87 2 ? 0.5 0.0 0.043 0.054 212 247 .. 260 295 .. 175 306 .. 0.70 3 ! 15.8 0.0 1e-06 1.3e-06 502 558 .. 511 567 .. 507 570 .. 0.94 Alignments for each domain: == domain 1 score: 4.7 bits; conditional E-value: 0.0022 AA3_2.hmm 2 syDYviVGGGtAGlvvAsrLsedpnvsVlviEaGgdee 39 ++D i+G+G G++ A+ L + + ++V+++ G + 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 20 TFDVCIIGSGPIGATYAKLLVK-AGLTVAMVDIGAATS 56 79****************9999.799****99998765 PP == domain 2 score: 0.5 bits; conditional E-value: 0.043 AA3_2.hmm 212 ayldpvekrsnltvltnatvtkilfdstkkkatGVe 247 ++++ +r+++++ltn++ k+ d+t++k++ + 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 260 DIYEDADQRKKFKLLTNHQCIKLETDETDYKIEKAR 295 44566899******************9997666555 PP == domain 3 score: 15.8 bits; conditional E-value: 1e-06 AA3_2.hmm 502 stvyHpvGTcamgprekggVVDselrVyGvknLRVvDaSvfPl 544 t+ H +GT++ g + ++VVD++++V ++nL v+ + 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 511 GTALHIAGTTRAGLTSGDSVVDTDCKVWKFDNLYLGGNGVIST 553 5889*************************************** PP AA3_2.hmm 545 lvsahtqatvyavA 558 + +++++ t +a A 2374811|Myclep1_GeneCatalog_proteins_20180625.aa.fasta|AA3_4|AA3_4 554 AFAGNPTLTSIAYA 567 ********999987 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (596 residues searched) Target model(s): 5 (2856 nodes) Passed MSV filter: 5 (1); expected 0.1 (0.02) Passed bias filter: 5 (1); expected 0.1 (0.02) Passed Vit filter: 4 (0.8); expected 0.0 (0.001) Passed Fwd filter: 4 (0.8); expected 0.0 (1e-05) Initial search space (Z): 5 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 120.42 // [ok]