# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA1/fasta_for_each_cluster/cluster_71.txt # target HMM database: merged_hmms/AA1.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA1/AA1_cluster_71.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 [L=511] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.8e-87 280.5 0.3 3.8e-87 280.5 0.3 2.3 2 AA1_2.hmm 5.5e-86 277.4 1.2 6.9e-86 277.0 1.2 1.0 1 AA1.hmm 1.4e-49 157.0 7.7 1.4e-49 157.0 1.3 2.7 3 AA1_3.hmm 3.6e-49 155.5 3.9 1.3e-48 153.6 0.1 2.7 3 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 280.5 0.3 3.8e-87 3.8e-87 2 336 .. 24 360 .. 23 361 .. 0.92 2 ? 0.1 1.1 0.075 0.075 182 195 .. 396 409 .. 375 486 .. 0.64 Alignments for each domain: == domain 1 score: 280.5 bits; conditional E-value: 3.8e-87 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlf 45 r +ig Ng+ P+p++ +++gd++ ++++N+l + +t++H+HG+f 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 24 RLAIGANGKLPIPPVYMTRGDTLYLHVHNSL-NVSTTVHAHGIF 66 678****************************.99********** PP AA1_2.hmm 46 qngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHsk 89 qngt + DG++m+t+C+ippg++ tY + eq Gt+W+H+H++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 67 QNGTVYNDGTAMITECSIPPGDNHTYIIAP-EQEGTFWLHGHYD 109 ***************************998.************* PP AA1_2.hmm 90 gqYeDGlrgpliiedkeepyeydeeltltlsdwYheeskelvke 133 + DGlr++lii +ke ++yd e+ +++ dwY +e e +k+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 110 EDNADGLRAALIIYEKEPIVDYDAEYLFAVEDWYSTEFIERMKQ 153 ******************************************** PP AA1_2.hmm 134 flskynptgaepip.dsllvnet...enatlevepgktYllrii 173 +++ + tg+ pi + +l+n + +++ep k+Y++r+i 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 154 IVH-TGITGNLPITySRALINGDlgnFTKPIKFEPSKKYRIRFI 196 977.5667777776155677543211445699************ PP AA1_2.hmm 174 nvgafasqylvledhemtivevDGvdvepsevdslyiavaQRys 217 n++a + +++ +h+m+i+e++Gv+ p+ vd++ + +QR+s 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 197 NMAATNWFKISMPGHKMQIIEIEGVHSVPYDVDQFDVGPGQRIS 240 ******************************************** PP AA1_2.hmm 218 vLvkakndtsknyalvakmdetmldvvpddlqlnvtstlvydks 261 vLv+ak++++ ny+ ++ +v + l+++ ++y ++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 241 VLVEAKDTDEFNYNYNITLYLIDNSFVSGANPLYYSGLIEYREN 284 *******9886666555555555556788889999********* PP AA1_2.hmm 262 aalaeastv.delealdDfkleplekeelleepdkeieldvemd 304 a+ ++ + d+++ +D+++++++ e+lle ++++i l+++ + 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 285 APVYQSPPIeDNYQWAEDINMNAFDGEPLLEPVTRKIVLNYQQK 328 ***9999664889******************************* PP AA1_2.hmm 305 nlkdgvnyaffNnitYvapkvptlltvlssge 336 l+dg +++++ +++Y++p vptl+t+l++g+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 329 ILSDGLPHYLLGDHPYQSPLVPTLFTALTMGD 360 ******************************97 PP == domain 2 score: 0.1 bits; conditional E-value: 0.075 AA1_2.hmm 182 ylvledhemtivev 195 +++l +h+++i+e 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 396 TFHLHGHTFQIIEY 409 34444444444443 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 277.0 1.2 6.9e-86 6.9e-86 8 358 .] 23 473 .. 15 473 .. 0.75 Alignments for each domain: == domain 1 score: 277.0 bits; conditional E-value: 6.9e-86 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGl 51 +r +i Ng++P P +++++gDt+ ++V+N+l + +tt+H hG+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 23 TRLAIGANGKLPIPPVYMTRGDTLYLHVHNSL-NVSTTVHAHGI 65 678999*************************9.89********* PP AA1.hmm 52 rqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHv 95 +q+gt ++DG+a++t+c i+pg++ tY + + q+Gt+w H H+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 66 FQNGTVYNDGTAMITECSIPPGDNHTYIIAPE-QEGTFWLHGHY 108 *****************************998.*********** PP AA1.hmm 96 slqyadGlrGaliirdpkskekydvddeelvillsdwyhktaee 139 + +adGlr alii++++ +yd +e + ++dwy ++ e 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 109 DEDNADGLRAALIIYEKEPIVDYD---AEYLFAVEDWYSTEFIE 149 ***************763333566...899***********888 PP AA1.hmm 140 ll....kenatgaepa.pdsllinGk.grlyncssklevlkvep 177 + ++ tg+ p + +linG g++ + + +k+ep 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 150 RMkqivHTGITGNLPItYSRALINGDlGNF---T---KPIKFEP 187 77444333356666666899******6654...2...369**** PP AA1.hmm 178 gktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdsl 221 +k+yr+r+in+a+ + +++s+ +Hk+++ie++gv py+vd++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 188 SKKYRIRFINMAATNWFKISMPGHKMQIIEIEGVHSVPYDVDQF 231 ******************************************** PP AA1.hmm 222 qiapGqrydvllkanqsa...gnywira.slds...aafdntta 258 +++pGqr++vl++a++++ ny i +d+ + + 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 232 DVGPGQRISVLVEAKDTDefnYNYNITLyLIDNsfvSGANPLYY 275 *************9998855336666663333344324578888 PP AA1.hmm 259 lailrYkgassas............................... 271 +++++Y+++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 276 SGLIEYRENAPVYqsppiednyqwaedinmnafdgepllepvtr 319 99999977433223333444333333333333333333333333 PP AA1.hmm 272 .......nvsfvepstslleaysgvdetka.............. 294 + + 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 320 kivlnyqQ---------------------Kilsdglphyllgdh 342 33333330.....................233333333333333 PP AA1.hmm 295 .klkln...................................... 299 + 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 343 pY---Qsplvptlftaltmgdlatdpaiygpqtvayvldhmdiv 383 30...133334444444444455555555555555557777777 PP AA1.hmm 300 ...........hp..lhghdfvvvnfd.....aedeak...... 319 h lhgh+f ++++ +ed+++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 384 eielhnpgspdHTfhLHGHTFQIIEYGptnatSEDNSTeiavrk 427 777888998888799*********66654444444444789999 PP AA1.hmm 320 .......rdtvavpkggwvvirfvadnpgvwllhchieaHlsmG 356 rdt +v + +v +rf+ad pgvw++hch+++Hl G 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 428 sagapmrRDTLMVRAWNYVKVRFRADSPGVWFFHCHMSTHLYLG 471 9999**9************************************* PP AA1.hmm 357 la 358 la 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 472 LA 473 96 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 157.0 1.3 1.4e-49 1.4e-49 31 295 .. 23 284 .. 5 301 .. 0.86 2 ? -1.4 0.0 0.24 0.24 218 231 .. 395 408 .. 368 413 .. 0.75 3 ? 2.8 0.1 0.013 0.013 100 126 .. 447 473 .. 440 479 .. 0.85 Alignments for each domain: == domain 1 score: 157.0 bits; conditional E-value: 1.4e-49 AA1_3.hmm 31 ekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGi 74 ++ a+ ng++P p + GDtl ++v+n+l+ t++H HGi 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 23 TRLAIGANGKLPIPPVYMTRGDTLYLHVHNSLN-VSTTVHAHGI 65 4557889*************************8.6899****** PP AA1_3.hmm 75 rqlntneqDGvpgvtqCpiapgesftYefratqyGtswYHsHys 118 q+ t +DG + +t+C+i+pg+++tY +q Gt w H Hy 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 66 FQNGTVYNDGTAMITECSIPPGDNHTYIIAPEQEGTFWLHGHYD 109 ******************************************** PP AA1_3.hmm 119 lQyadGvlGplvinGP.asanydvdlgpllltdwshesafelve 161 adG+ +l+i+ +yd++ + ++dw+ +++ e ++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 110 EDNADGLRAALIIYEKePIVDYDAEY-LFAVEDWYSTEFIERMK 152 *************9872467898885.6789*****99988888 PP AA1_3.hmm 162 eae....asggppvadniLingknkvkkskkeeegeysevklek 201 + + + p + + Ling + + + +k+e+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 153 QIVhtgiTGNLPITYSRALINGDLGNFT---------KPIKFEP 187 8775665666778889999999754444.........4799*** PP AA1_3.hmm 202 gkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdsl 245 kkyr+r+in ++ ++fk+s+ gHk+++i+ v py++d+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 188 SKKYRIRFINMAATNWFKISMPGHKMQIIEIEGVHSVPYDVDQF 231 ******************************************** PP AA1_3.hmm 246 ligigqRydviveanqe...eenywlraelaeaCsklnaeekei 286 +g gqR+ v+vea+++ + ny + l ++ a+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 232 DVGPGQRISVLVEAKDTdefNYNYNITLYLIDNSFVSGANPLYY 275 ***************99877777777766666555545677777 PP AA1_3.hmm 287 kailrYeea 295 ++++Y e+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 276 SGLIEYREN 284 777777765 PP == domain 2 score: -1.4 bits; conditional E-value: 0.24 AA1_3.hmm 218 fkfsidgHkltvia 231 +f++ gH++++i+ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 395 HTFHLHGHTFQIIE 408 36888888888886 PP == domain 3 score: 2.8 bits; conditional E-value: 0.013 AA1_3.hmm 100 tYefratqyGtswYHsHyslQyadGvl 126 + +fra++ G ++H H s+ G++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 447 KVRFRADSPGVWFFHCHMSTHLYLGLA 473 568****************99888875 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 153.6 0.1 1.3e-48 1.3e-48 7 244 .. 23 254 .. 20 305 .. 0.83 2 ? 1.1 0.0 0.038 0.038 192 215 .. 392 415 .. 385 427 .. 0.83 3 ? -0.1 0.1 0.088 0.088 86 110 .. 452 476 .. 441 479 .. 0.79 Alignments for each domain: == domain 1 score: 153.6 bits; conditional E-value: 1.3e-48 AA1_1.hmm 7 srsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsih 50 +r a+ +ng+ p p + ++gd++ ++v+n+L+ st++h 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 23 TRLAIGANGKLPIPPVYMTRGDTLYLHVHNSLN-----VSTTVH 61 688999************************986.....79**** PP AA1_1.hmm 51 whglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwY 94 hg+fq+gt ++dg+a++t+C i pg+ ++y + +p+q Gtfw 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 62 AHGIFQNGTVYNDGTAMITECSIPPGDNHTYII-APEQEGTFWL 104 *******************************77.579******* PP AA1_1.hmm 95 HshlstqycdglrGalvvydpedplkslydvddestvitladwy 138 H h+ + dglr al++y++e p d d + ++ + dwy 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 105 HGHYDEDNADGLRAALIIYEKE-PI---VDYDA-EYLFAVEDWY 143 *******************975.54...34444.56899***** PP AA1_1.hmm 139 htaakell.klva.vadstlinGlgrya..ggpeaelavvnvek 178 t+ e + ++v+ l +r g+ + ++ e 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 144 STEFIERMkQIVHtGITGNLPITYSRALinGDLGNFTKPIKFEP 187 9987766533332122333334445543214455556779**** PP AA1_1.hmm 179 gkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsi 222 k+Yr+r++++++++ f++s+ gh++++ie++gv++ p++vd++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 188 SKKYRIRFINMAATNWFKISMPGHKMQIIEIEGVHSVPYDVDQF 231 ******************************************** PP AA1_1.hmm 223 qifagqrysvvleanqevd.nYw 244 ++ gqr sv++ea+ + + nY 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 232 DVGPGQRISVLVEAKDTDEfNYN 254 **************876544443 PP == domain 2 score: 1.1 bits; conditional E-value: 0.038 AA1_1.hmm 192 dpnftfsidghnltvieadgvntk 215 +p +tf + gh++++ie +n + 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 392 SPDHTFHLHGHTFQIIEYGPTNAT 415 5889*************9877765 PP == domain 3 score: -0.1 bits; conditional E-value: 0.088 AA1_1.hmm 86 pdqaGtfwYHshlstqycdglrGal 110 +d G +++H h+st gl ++ 183380|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 452 ADSPGVWFFHCHMSTHLYLGLAVTF 476 47789**********9887776555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (511 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 79.50 // Query: 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 [L=549] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.2e-85 274.7 1.2 2.4e-84 271.3 0.0 2.4 2 AA1_2.hmm 2.1e-81 262.3 0.1 2.8e-81 261.9 0.1 1.0 1 AA1.hmm 5.8e-51 161.4 0.0 1.3e-50 160.2 0.0 1.6 1 AA1_1.hmm 1e-45 144.3 0.0 2.5e-44 139.8 0.0 2.2 2 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 271.3 0.0 2.4e-84 2.4e-84 2 336 .. 39 375 .. 38 376 .. 0.95 2 ? 0.7 1.3 0.049 0.049 16 54 .. 390 430 .. 384 494 .. 0.68 Alignments for each domain: == domain 1 score: 271.3 bits; conditional E-value: 2.4e-84 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 rr igvNgq P+p++ +++gd+++++++N+l + +t++H+HGlf++g ++mDG 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 39 RRSIGVNGQSPIPPVYATRGDTLILNVHNSL-NVTTTIHAHGLFMRGMSYMDG 90 899****************************.99******************* PP AA1_2.hmm 55 asmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkee 107 + m qC+ippge++tYe+++ eq Gt+W+H+H + + DGlr++l++ d+e 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 91 PGMTNQCGIPPGESFTYEYHL-EQEGTFWLHGHDHDHNADGLRTALVVYDEEP 142 *********************.******************************* PP AA1_2.hmm 108 pyeydeeltltlsdwYheeskelvkeflskynptgaepipdsllv......ne 154 py+yd e +t dw+ + + + ++pt p p+s + n 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 143 PYKYDAEHLFTFEDWFAGQFADRAALT---TDPTKPFPPPSSYGFglingyNG 192 *****************9999877666...45666678888877777798888 PP AA1_2.hmm 155 tenatlevepgktYllriinvgafasqylvledhemtivevDGvdvepsevds 207 +++ +++ep+ktY++r+in++ + + + + +++++evDG+ +++ vd 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 193 NSTKPIKFEPKKTYRIRLINMSSTLWFKFRIPGLKLRVIEVDGILSDEHIVDG 245 89999************************************************ PP AA1_2.hmm 208 lyiavaQRysvLvkakndtsknyalvakmdetmldvvpddlqlnvtstlvydk 260 +++a a RysvLv+a+++++ ny km + + + p + ++ ++y + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 246 VQLAPAMRYSVLVTAHESDEFNYYYKVKMYADFIPASPGENPRFYSGLVEYRQ 298 ***************************************************** PP AA1_2.hmm 261 saalaeastvdel..ealdDfkleplekeelleepdkeieldvemdnlkdgvn 311 + + +e vd+ + ++D+k+++l+k + +d+++ l v + ++ g + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 299 DSPVKELPDVDDSklTWVEDIKMTALDK-QPPLPVDRSLYLWVGNNIMSSGQH 350 ********997654599***********.666679****************** PP AA1_2.hmm 312 yaffNnitYvapkvptlltvlssge 336 + + nitY ap vp+l+t++++g+ 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 351 MDHISNITYYAPLVPSLFTAMTTGD 375 **********************986 PP == domain 2 score: 0.7 bits; conditional E-value: 0.049 AA1_2.hmm 16 ievnkgdrvevkltNgledentslHfHGlfqngt...namDG 54 + ++++ ve++++N + +H HG ++ t + DG 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 390 VVLKHNEVVELEVHNPN-RVPHPMHLHGHAFQVTeygPSLDG 430 55677888888888874.668888999987777633334555 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 261.9 0.1 2.8e-81 2.8e-81 8 352 .. 38 482 .. 29 485 .. 0.81 Alignments for each domain: == domain 1 score: 261.9 bits; conditional E-value: 2.8e-81 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaD 60 r+ i vNgq P P ++a++gDt++++V+N+l + +ttiH hGl+++g ++D 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 38 YRRSIGVNGQSPIPPVYATRGDTLILNVHNSL-NVTTTIHAHGLFMRGMSYMD 89 57899**************************9.789***************** PP AA1.hmm 61 GvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpk 113 G+ + +qc i+pg+sftYe +++ q+Gt+w H H ++adGlr al+++d+ 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 90 GPGMTNQCGIPPGESFTYEYHLE-QEGTFWLHGHDHDHNADGLRTALVVYDE- 140 **********************9.**************************75. PP AA1.hmm 114 skekydvddeelvillsdwyhktaeell..kenatgaepa...pdsllinGkg 161 + y++d +e+ ++++dw+ + ++ +++ t+ p +linG + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 141 -EPPYKYD-AEHLFTFEDWFAGQFADRAalTTDPTKPFPPpssYGFGLINGYN 191 .4457766.889**********9888885533334444442223457****97 PP AA1.hmm 162 rlyncssklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk 214 +s ++ +k+ep+ktyr+rlin+++ ++f i + kl vie+Dg+ + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 192 G---NS--TKPIKFEPKKTYRIRLINMSSTLWFKFRIPGLKLRVIEVDGILSD 239 6...23..457****************************************** PP AA1.hmm 215 pyevdslqiapGqrydvllkanqsag.nywira.slds...a...afdnttal 259 vd +q+ap+ ry+vl++a++s++ ny+ ++ +++ a + + + + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 240 EHIVDGVQLAPAMRYSVLVTAHESDEfNYYYKVkMYADfipAspgE-NPRFYS 291 *********************999978******5555587625533.677789 PP AA1.hmm 260 ailrYkgassas......................................... 271 ++++Y+++s + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 292 GLVEYRQDSPVKelpdvddskltwvedikmtaldkqpplpvdrslylwvgnni 344 *****886555578888888888999999999999999999999999999999 PP AA1.hmm 272 ...........nvsfvepstslleaysgv...........detka.......k 295 n+++ p ++ l + ++ + + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 345 mssgqhmdhisNITYYAPLVPSLFTAMTTgdlamnpdvynN---RthpvvlkH 394 99999999999888888866655443222345555554432...133454440 PP AA1.hmm 296 lkln..............hp..lhghdfvvvnfd..........aedeak... 319 n hp lhgh f v ++ + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 395 ---NevvelevhnpnrvpHPmhLHGHAFQVTEYGpsldgftpgfT----Fspl 440 ...244555566888999*************66664444444440....0444 PP AA1.hmm 320 .........rdtvavpkggwvvirfvadnpgvwllhchieaH 352 rd++ +p+ +++ +rf+adnpgvwl hch++ H 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 441 vqslvapiqRDVMEIPPYSYIKVRFRADNPGVWLYHCHVNIH 482 455666777********************************9 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 160.2 0.0 1.3e-50 1.3e-50 4 268 .. 34 296 .. 31 331 .. 0.82 Alignments for each domain: == domain 1 score: 160.2 bits; conditional E-value: 1.3e-50 AA1_1.hmm 4 DGfs.rsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglf 55 DG++ r+++ vng+ p p + +++gd++ +nv+n+L+ +t+ih hglf 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 34 DGINyRRSIGVNGQSPIPPVYATRGDTLILNVHNSLN-----VTTTIHAHGLF 81 7765489999************************986.....689******** PP AA1_1.hmm 56 qkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglrG 108 ++g +++dgp + +qC i pg+sf+y++++ +q Gtfw H h + dglr 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 82 MRGMSYMDGPGMTNQCGIPPGESFTYEYHL-EQEGTFWLHGHDHDHNADGLRT 133 ****************************99.899******************* PP AA1_1.hmm 109 alvvydpedplkslydvddestvitladwyhtaakell......klvavadst 155 alvvyd+e p+k yd ++ ++t+ dw+ + + + + + + 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 134 ALVVYDEEPPYK--YD---AEHLFTFEDWFAGQFADRAalttdpT--KPFPPP 179 **********87..54...557899*****876555443444321..223334 PP AA1_1.hmm 156 linGlgryaggpeaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvie 208 G g ++g + ++ ++ e +k Yr+rl+++s++ f+f i g +l vie 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 180 SSYGFGLINGYNGNSTKPIKFEPKKTYRIRLINMSSTLWFKFRIPGLKLRVIE 232 567999999989999999*********************************** PP AA1_1.hmm 209 adgvntkpltvdsiqifagqrysvvleanqevd.nYwiranpnlgk...ntgf 257 +dg+ ++ + vd +q+ + rysv+++a ++ + nY+ + ++ + + g 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 233 VDGILSDEHIVDGVQLAPAMRYSVLVTAHESDEfNYYYKVKMYADFipaSPGE 285 ****************************8876559987766554333334455 PP AA1_1.hmm 258 egginsailry 268 + s ++ y 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 286 NPRFYSGLVEY 296 55555555555 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 139.8 0.0 2.5e-44 2.5e-44 16 296 .. 22 300 .. 12 313 .. 0.84 2 ? 2.0 0.0 0.021 0.021 93 118 .. 455 480 .. 452 484 .. 0.89 Alignments for each domain: == domain 1 score: 139.8 bits; conditional E-value: 2.5e-44 AA1_3.hmm 16 ytlevtestlapDGveke.allvngqyPgptieadWGDtlevtvknnlkknGt 67 +++v + + DG++ + + vngq P p + a GDtl ++v+n+l+ t 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 22 VDWDVGYVYMMRDGINYRrSIGVNGQSPIPPVYATRGDTLILNVHNSLN-VTT 73 567888889999***7665999**************************8.679 PP AA1_3.hmm 68 siHwHGirqlntneqDGvpgvtqCpiapgesftYefratqyGtswYHsHyslQ 120 +iH HG+ + + +DG qC i+pgesftYe++ +q Gt w H H 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 74 TIHAHGLFMRGMSYMDGPGMTNQCGIPPGESFTYEYHLEQEGTFWLHGHDHDH 126 9****************88888******************************* PP AA1_3.hmm 121 yadGvlGplvinGPasanydvdl.gpllltdwshesafelveeae..asggp. 169 adG+ +lv++ + +y +d+ + ++++dw+ ++ + ++ ++ ++ p 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 127 NADGLRTALVVYDE-EPPYKYDAeHLFTFEDWFAGQFADRAALTTdpTKPFPp 178 ***********964.56677776245678****99988877777744222221 PP AA1_3.hmm 170 .pvadniLingknkvkkskkeeegeysevklekgkkyrlrlintsvdstfkfs 221 + +Ling n +++ + +k+e++k+yr+rlin s+ +fkf 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 179 pSSYGFGLINGYNGNST---------KPIKFEPKKTYRIRLINMSSTLWFKFR 222 12233468888776665.........6799*********************** PP AA1_3.hmm 222 idgHkltviaaDfvpiepyttdslligigqRydviveanqe.eenywlraela 273 i g kl+vi+ D + +d ++++ + Ry v+v+a+++ e ny+ ++++ 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 223 IPGLKLRVIEVDGILSDEHIVDGVQLAPAMRYSVLVTAHESdEFNYYYKVKMY 275 ***************************************997889**999988 PP AA1_3.hmm 274 ea..CsklnaeekeikailrYeeas 296 ++ + ++ + ++++Y ++s 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 276 ADfiPASPGENPRFYSGLVEYRQDS 300 8733233347777888888888765 PP == domain 2 score: 2.0 bits; conditional E-value: 0.021 AA1_3.hmm 93 iapgesftYefratqyGtswYHsHys 118 i+p + ++ +fra++ G YH H 264036|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 455 IPPYSYIKVRFRADNPGVWLYHCHVN 480 788888999***************75 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (549 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 67.94 // Query: 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 [L=700] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.7e-91 294.8 0.4 1.9e-90 291.3 0.0 2.5 3 AA1_2.hmm 1.3e-84 272.9 0.1 1.9e-84 272.3 0.1 1.1 1 AA1.hmm 1.3e-52 166.8 0.0 3.3e-52 165.5 0.0 1.7 1 AA1_1.hmm 6.3e-50 158.1 0.0 4.1e-48 152.2 0.0 2.3 2 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 291.3 0.0 1.9e-90 1.9e-90 2 336 .. 39 375 .. 38 376 .. 0.94 2 ? -0.9 0.3 0.15 0.15 17 50 .. 391 423 .. 384 437 .. 0.73 3 ? -0.5 0.0 0.11 0.11 62 89 .. 454 480 .. 451 492 .. 0.89 Alignments for each domain: == domain 1 score: 291.3 bits; conditional E-value: 1.9e-90 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 ++ igvNg+ P+p++ +++gd+++++++N+l + +t++H+HGlf++g ++mDG 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 39 KQSIGVNGRSPIPPVYATRGDTLILNVHNSL-NVTTTIHAHGLFMRGMAYMDG 90 688****************************.99******************* PP AA1_2.hmm 55 asmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkee 107 + m tqC+ippge++tY++++ eq Gt+W+H+H + q DGlr++l+i dke 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 91 PRMTTQCGIPPGESFTYKYHL-EQEGTFWLHGHDHDQNADGLRTALVIYDKEP 142 *********************.******************************* PP AA1_2.hmm 108 pyeydeeltltlsdwYheeskelvkeflskynptgaepipdsllv......ne 154 py+yd e +t dwY+e+ e + + pt p p+ + n 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 143 PYKYDAEHLFTFEDWYKEQFAERAALTTD---PTQPFPPPSGYGFglingyNG 192 ******************99987766655...555566666655566688777 PP AA1_2.hmm 155 tenatlevepgktYllriinvgafasqylvledhemtivevDGvdvepsevds 207 +++ +++ep+ktY++r+in++ + + + + + +++i+evDG+ ++++vd 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 193 NTTKPIRFEPKKTYRIRLINMSSTVWFKFRIPGLKLRIIEVDGILSDEHPVDG 245 88888************************************************ PP AA1_2.hmm 208 lyiavaQRysvLvkakndtsknyalvakmdetmldvvpddlqlnvtstlvydk 260 +++a a RysvLv+a+++++ ny + k+ + ++ p + ++ ++y++ 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 246 VQLAPAMRYSVLVTAHDSDEYNYYFKIKLYADFIKPSPGETPRFYSGLIEYKQ 298 ***************************************************** PP AA1_2.hmm 261 saalaeastvdel..ealdDfkleplekeelleepdkeieldvemdnlkdgvn 311 + + +e vd+ + ++D+kl++l+k + +d++++l+v + ++ g + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 299 ESPVKEFPDVDDStlTWVEDIKLAALDK-QPPLPVDRSLRLTVGNNLMSTGQH 350 ********996654599***********.666679****************** PP AA1_2.hmm 312 yaffNnitYvapkvptlltvlssge 336 + +NnitY ap vp+l+t++++g+ 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 351 MNHINNITYYAPLVPSLFTAMTTGD 375 **********************986 PP == domain 2 score: -0.9 bits; conditional E-value: 0.15 AA1_2.hmm 17 evnkgdrvevkltNgledentslHfHGlfqngtn 50 ++++ +e++++N + +H HG ++ t+ 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 391 VLKHNEVIELEVHNPN-RLPHPMHLHGHAFQVTE 423 4566677777777653.44889999998887765 PP == domain 3 score: -0.5 bits; conditional E-value: 0.11 AA1_2.hmm 62 pippgetltYeftveeqvGtYWyHsHsk 89 +ipp++ ++ +f++ ++ G + yH+H + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 454 EIPPNSYIKVRFRA-DNPGVWLYHCHVN 480 58999999999999.9**********87 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 272.3 0.1 1.9e-84 1.9e-84 8 352 .. 38 482 .. 26 485 .. 0.81 Alignments for each domain: == domain 1 score: 272.3 bits; conditional E-value: 1.9e-84 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaD 60 ++ i vNg+ P P ++a++gDt++++V+N+l + +ttiH hGl+++g +++D 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 38 YKQSIGVNGRSPIPPVYATRGDTLILNVHNSL-NVTTTIHAHGLFMRGMAYMD 89 56899**************************9.789***************** PP AA1.hmm 61 GvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpk 113 G+ + tqc i+pg+sftY+ +++ q+Gt+w H H q+adGlr al+i+d+ 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 90 GPRMTTQCGIPPGESFTYKYHLE-QEGTFWLHGHDHDQNADGLRTALVIYDK- 140 **********************9.**************************76. PP AA1.hmm 114 skekydvddeelvillsdwyhktaeell..kenatgaepa...pdsllinGkg 161 + y++d +e+ ++++dwy+++ +e +++ t+ p +linG + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 141 -EPPYKYD-AEHLFTFEDWYKEQFAERAalTTDPTQPFPPpsgYGFGLINGYN 191 .4457766.889***********998885522223333333344778****97 PP AA1.hmm 162 rlyncssklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk 214 ++ +++ep+ktyr+rlin+++ ++f i + kl +ie+Dg+ + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 192 GN-----TTKPIRFEPKKTYRIRLINMSSTVWFKFRIPGLKLRIIEVDGILSD 239 52.....23579***************************************** PP AA1.hmm 215 pyevdslqiapGqrydvllkanqsag.nywira.slds..a....afdnttal 259 vd +q+ap+ ry+vl++a++s++ ny++++ +++ + + + + + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 240 EHPVDGVQLAPAMRYSVLVTAHDSDEyNYYFKIkLYADfiKpspgE-TPRFYS 291 ********************9999966******6666687245544.456669 PP AA1.hmm 260 ailrYkgassas......................................... 271 ++++Yk++s + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 292 GLIEYKQESPVKefpdvddstltwvediklaaldkqpplpvdrslrltvgnnl 344 *****886555578888888888999999999999999999999999999988 PP AA1.hmm 272 ...........nvsfvepstsllea.ysgv...........detka....... 294 n+++ p ++ l + ++ + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 345 mstgqhmnhinNITYYAPLVPSLFTaM-TTgdlamnpevynN---Rthpvvlk 393 888888888888888888666554423.22235555554432...13345443 PP AA1.hmm 295 klkln..............hp..lhghdfvvvnfd........aedeak.... 319 + n hp lhgh f v ++ + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 394 H---NevielevhnpnrlpHPmhLHGHAFQVTEYGpslatfqpG----Stfsp 439 0...255555566889999*************776655433330....14556 PP AA1.hmm 320 ..........rdtvavpkggwvvirfvadnpgvwllhchieaH 352 rd++ +p+++++ +rf+adnpgvwl hch++ H 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 440 lvqslvapirRDVMEIPPNSYIKVRFRADNPGVWLYHCHVNIH 482 6667777888********************************9 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 165.5 0.0 3.3e-52 3.3e-52 4 269 .. 34 297 .. 31 331 .. 0.80 Alignments for each domain: == domain 1 score: 165.5 bits; conditional E-value: 3.3e-52 AA1_1.hmm 4 DGfs.rsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglf 55 DG++ ++++ vng p p + +++gd++ +nv+n+L+ +t+ih hglf 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 34 DGVNyKQSIGVNGRSPIPPVYATRGDTLILNVHNSLN-----VTTTIHAHGLF 81 7765377899************************986.....689******** PP AA1_1.hmm 56 qkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglrG 108 ++g +++dgp + tqC i pg+sf+y++++ +q Gtfw H h + q dglr 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 82 MRGMAYMDGPRMTTQCGIPPGESFTYKYHL-EQEGTFWLHGHDHDQNADGLRT 133 ****************************99.899******************* PP AA1_1.hmm 109 alvvydpedplkslydvddestvitladwyhtaakell......klvavadst 155 alv+yd+e p+k yd ++ ++t+ dwy ++ e + +++ + 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 134 ALVIYDKEPPYK--YD---AEHLFTFEDWYKEQFAERAalttdpTQPFPP--P 179 **********87..54...567999*****99876665344433222222..3 PP AA1_1.hmm 156 linGlgryaggpeaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvie 208 G g ++g + + ++ e +k Yr+rl+++s++ f+f i g +l +ie 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 180 SGYGFGLINGYNGNTTKPIRFEPKKTYRIRLINMSSTVWFKFRIPGLKLRIIE 232 3467778888888888899********************************** PP AA1_1.hmm 209 adgvntkpltvdsiqifagqrysvvleanqe.vdnYwiranpnlgk...ntgf 257 +dg+ ++ + vd +q+ + rysv+++a + nY+ + + + + g 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 233 VDGILSDEHPVDGVQLAPAMRYSVLVTAHDSdEYNYYFKIKLYADFikpSPGE 285 ***************************97651559987655433322245555 PP AA1_1.hmm 258 egginsailryk 269 + s ++ yk 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 286 TPRFYSGLIEYK 297 556666666665 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 152.2 0.0 4.1e-48 4.1e-48 15 296 .. 21 300 .. 11 313 .. 0.86 2 ! 3.5 0.0 0.0076 0.0076 93 118 .. 455 480 .. 452 484 .. 0.92 Alignments for each domain: == domain 1 score: 152.2 bits; conditional E-value: 4.1e-48 AA1_3.hmm 15 eytlevtestlapDGveke.allvngqyPgptieadWGDtlevtvknnlkknG 66 +++vt + + DGv+ + + vng+ P p + a GDtl ++v+n+l+ 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 21 VVDWDVTYVYMMRDGVNYKqSIGVNGRSPIPPVYATRGDTLILNVHNSLN-VT 72 4678999999******7654999**************************8.67 PP AA1_3.hmm 67 tsiHwHGirqlntneqDGvpgvtqCpiapgesftYefratqyGtswYHsHysl 119 t+iH HG+ + +DG tqC i+pgesftY+++ +q Gt w H H 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 73 TTIHAHGLFMRGMAYMDGPRMTTQCGIPPGESFTYKYHLEQEGTFWLHGHDHD 125 99*************************************************** PP AA1_3.hmm 120 QyadGvlGplvinGPasanydvdl.gpllltdwshesafelveeaeasggppv 171 Q adG+ +lvi+ + +y +d+ + ++++dw++e++ e ++ ++ ++p 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 126 QNADGLRTALVIYDK-EPPYKYDAeHLFTFEDWYKEQFAERAALTTDPTQPFP 177 ************965.56677776245678*******9999888885555544 PP AA1_3.hmm 172 adn....iLingknkvkkskkeeegeysevklekgkkyrlrlintsvdstfkf 220 + +Ling n +++ + +++e++k+yr+rlin s+ +fkf 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 178 PPSgygfGLINGYNGNTT---------KPIRFEPKKTYRIRLINMSSTVWFKF 221 444112257888776665.........6799********************** PP AA1_3.hmm 221 sidgHkltviaaDfvpiepyttdslligigqRydviveanqe.eenywlrael 272 i g kl++i+ D + +d ++++ + Ry v+v+a+++ e ny+++ +l 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 222 RIPGLKLRIIEVDGILSDEHPVDGVQLAPAMRYSVLVTAHDSdEYNYYFKIKL 274 ***************************************999799*****999 PP AA1_3.hmm 273 aeaCskln..aeekeikailrYeeas 296 ++ k + ++ + ++++Y+++s 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 275 YADFIKPSpgETPRFYSGLIEYKQES 300 88766554346777788888888776 PP == domain 2 score: 3.5 bits; conditional E-value: 0.0076 AA1_3.hmm 93 iapgesftYefratqyGtswYHsHys 118 i+p++ ++ +fra++ G YH H 323427|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 455 IPPNSYIKVRFRADNPGVWLYHCHVN 480 8999********************75 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (700 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.01s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 122.93 // Query: 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 [L=551] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-97 315.7 0.3 1.5e-97 315.4 0.3 1.0 1 AA1.hmm 5.4e-96 309.6 0.0 1.9e-94 304.5 0.0 2.6 3 AA1_2.hmm 5.1e-57 181.3 0.0 1.1e-56 180.2 0.0 1.5 1 AA1_1.hmm 1.1e-55 177.1 1.9 8.6e-55 174.1 0.4 2.3 3 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 315.4 0.3 1.5e-97 1.5e-97 8 358 .] 27 489 .. 19 489 .. 0.81 Alignments for each domain: == domain 1 score: 315.4 bits; conditional E-value: 1.5e-97 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrq 53 r++i vNg +P P ++++egDt+v++V+N l +++t+iH hG++q 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 27 IRTAIGVNGALPIPPVYVTEGDTLVLHVYNGL-NQSTSIHAHGIFQ 71 6899***************************9.89*********** PP AA1.hmm 54 lgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqy 99 ++tn++DG+a+vtqc i+pg sftYe +++ qaGt+w H H q+ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 72 RNTNYMDGPAMVTQCGIPPGGSFTYEYQIN-QAGTFWLHGHDHHQN 116 *****************************9.*************** PP AA1.hmm 100 adGlrGaliirdpkske.kydvddeelvillsdwyhktaeell... 141 +dGlr +li+rd++s yd +e ++ l+dwy++ +e l 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 117 SDGLRTPLIVRDKHSPPfYYD---KEYIFSLEDWYNAPFSERLadt 159 ***********8744445666...999***********99999554 PP AA1.hmm 142 ..kenatgaepapdsllinGkgrlyncssklevlkvepgktyrlrl 185 +++ ep +linG + ++ l +e gktyr+rl 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 160 ldPNKPFPPEPSYPHALINGYNGN-----HTGPLLFEVGKTYRIRL 200 4332334444447899*****762.....234689*********** PP AA1.hmm 186 inaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydv 231 in+++ + ++f++ nH+++vieaDgvy p vd ++++pGqry++ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 201 INMSTTEWFKFAMSNHQMKVIEADGVYSVPAPVDGVTLGPGQRYSI 246 ********************************************** PP AA1.hmm 232 llkanqsag.nywira.slds...a..afdnttalailrYkg.... 266 l++a+++++ ny ++ ++s + ++ + ++ ++Y+ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 247 LVSAHSNSNyNYKYMIeLFASfipElrGMSPRYYSGRIEYNPnalv 292 ***9998844555444336666652556788999999999775555 PP AA1.hmm 267 ...assas...................................... 271 + + 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 293 vavN---Pettlkslpenesmawmydvelsalshrpalpvdrsiel 335 5541...055577777777888999999999999999999999999 PP AA1.hmm 272 .................nvsfvepstslleay..sgv....detka 294 n+++++p +++l ++ + + 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 336 vlggasftdgitrdvinNITYAQPLIPTLYSAisM-GslstN---E 377 99999999999999999999999988888774232.234331...1 PP AA1.hmm 295 ................klkln...........hp..lhghdfvvvn 311 hp lhgh+f +++ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 378 tiygpqshaiilrhleY---IeltiynpnslpHPmhLHGHTFQIIE 420 23345455566663331...366677788888*************6 PP AA1.hmm 312 fd..........aedeak............rdtvavpkggwvvirf 335 + ++++++ rdt+++p +v +rf 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 421 YGpidiemfpnsERNPSTasiikasnhpmeRDTIVIPIMQYVKLRF 466 655555566555333333667777777778**************** PP AA1.hmm 336 vadnpgvwllhchieaHlsmGla 358 +adnpgvwl+hch++ H+ mG+a 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 467 RADNPGVWLFHCHMDIHFGMGMA 489 **********************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 304.5 0.0 1.9e-94 1.9e-94 2 335 .. 28 371 .. 27 373 .. 0.92 2 ? -1.3 0.0 0.19 0.19 183 202 .. 409 428 .. 398 435 .. 0.83 3 ? 1.7 0.0 0.024 0.024 69 101 .. 462 493 .. 454 503 .. 0.80 Alignments for each domain: == domain 1 score: 304.5 bits; conditional E-value: 1.9e-94 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqn 47 r++igvNg P+p++ v++gd+++++++Ngl +++ts+H+HG+fq+ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 28 RTAIGVNGALPIPPVYVTEGDTLVLHVYNGL-NQSTSIHAHGIFQR 72 789****************************.99************ PP AA1_2.hmm 48 gtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYe 93 +tn+mDG++mvtqC+ippg ++tYe+++ +q+Gt+W+H+H + q + 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 73 NTNYMDGPAMVTQCGIPPGGSFTYEYQI-NQAGTFWLHGHDHHQNS 117 ****************************.***************** PP AA1_2.hmm 94 DGlrgpliiedke.epyeydeeltltlsdwYheeskelvkeflsky 138 DGlr+pli++dk+ p+ yd+e++++l dwY+ +e +++ l ++ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 118 DGLRTPLIVRDKHsPPFYYDKEYIFSLEDWYNAPFSERLADTLDPN 163 ***********996789***************************** PP AA1_2.hmm 139 nptgaepipdsllv...netenatlevepgktYllriinvgafasq 181 +p ep ++l+ n +++ l +e gktY++r+in+++ + 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 164 KPFPPEPSYPHALIngyNGNHTGPLLFEVGKTYRIRLINMSTTEWF 209 *******8777777455556666799******************** PP AA1_2.hmm 182 ylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndts 227 +++ +h+m+++e+DGv+ p +vd +++ +QRys+Lv+a+++++ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 210 KFAMSNHQMKVIEADGVYSVPAPVDGVTLGPGQRYSILVSAHSNSN 255 ********************************************** PP AA1_2.hmm 228 knyalvakmdetmldvvpddlqlnvtstlvydksaalaeas...tv 270 ny+ + ++ + + + +++ ++y+ +a + + t+ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 256 YNYKYMIELFASFIPELRGMSPRYYSGRIEYNPNALVVAVNpetTL 301 **********999999999999999999999999866555544433 PP AA1_2.hmm 271 ......delealdDfkleplekeelleepdkeieldvemdnlkdgv 310 +++ + D++l++l++++ + +d++iel + +++dg+ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 302 kslpenESMAWMYDVELSALSHRP-ALPVDRSIELVLGGASFTDGI 346 334444777999**********55.5579***************** PP AA1_2.hmm 311 nyaffNnitYvapkvptlltvlssg 335 ++ ++NnitY +p +ptl++++s+g 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 347 TRDVINNITYAQPLIPTLYSAISMG 371 ***********************98 PP == domain 2 score: -1.3 bits; conditional E-value: 0.19 AA1_2.hmm 183 lvledhemtivevDGvdvep 202 ++l +h+++i+e +d+e 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 409 MHLHGHTFQIIEYGPIDIEM 428 678999****9999888876 PP == domain 3 score: 1.7 bits; conditional E-value: 0.024 AA1_2.hmm 69 ltYeftveeqvGtYWyHsHskgqYeDGlrgpli 101 ++ +f++ ++ G + +H+H++ ++ G+ ++ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 462 VKLRFRA-DNPGVWLFHCHMDIHFGMGMALTFV 493 5556677.899****************988887 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 180.2 0.0 1.1e-56 1.1e-56 8 243 .. 28 258 .. 22 300 .. 0.88 Alignments for each domain: == domain 1 score: 180.2 bits; conditional E-value: 1.1e-56 AA1_1.hmm 8 rsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 r+a+ vng p p + ++gd++ ++v n L+ +stsih hg 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 28 RTAIGVNGALPIPPVYVTEGDTLVLHVYNGLN-----QSTSIHAHG 68 899**************************996.....68******* PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshls 99 +fq++tn++dgpa+vtqC i pg sf+y++++ +qaGtfw H h + 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 69 IFQRNTNYMDGPAMVTQCGIPPGGSFTYEYQI-NQAGTFWLHGHDH 113 *******************************9.9************ PP AA1_1.hmm 100 tqycdglrGalvvydpedplkslydvddestvitladwyhtaakel 145 q dglr +l+v d++ p y d++ +++l dwy + +e 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 114 HQNSDGLRTPLIVRDKHSPPF-YY---DKEYIFSLEDWYNAPFSER 155 *****************9975.45...5678********9988777 PP AA1_1.hmm 146 l..........klvavadstlinGlgryaggpeaelavvnvekgkr 181 l + +linG ++g +l e gk 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 156 LadtldpnkpfPPEPSYPHALINGYNGNHTG---PLL---FEVGKT 195 6688888764433345557899996544444...443...4679** PP AA1_1.hmm 182 Yrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifag 227 Yr+rl+++s+++ f+f++ +h+++vieadgv + p vd +++ g 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 196 YRIRLINMSTTEWFKFAMSNHQMKVIEADGVYSVPAPVDGVTLGPG 241 ********************************************** PP AA1_1.hmm 228 qrysvvleanqevd.nY 243 qrys++++a + + nY 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 242 QRYSILVSAHSNSNyNY 258 *******9987643244 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 174.1 0.4 8.6e-55 8.6e-55 20 267 .. 15 259 .. 4 300 .. 0.87 2 ? -3.6 0.1 1.1 1.1 220 238 .. 409 427 .. 405 431 .. 0.77 3 ? 1.7 0.0 0.027 0.027 97 126 .. 460 489 .. 454 497 .. 0.85 Alignments for each domain: == domain 1 score: 174.1 bits; conditional E-value: 8.6e-55 AA1_3.hmm 20 vtestlapDGv.ekeallvngqyPgptieadWGDtlevtvknnlkk 64 + +++ D + ++a+ vng +P p + GDtl+++v n l+ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 15 IGYLQIDRDNQgIRTAIGVNGALPIPPVYVTEGDTLVLHVYNGLN- 59 555556666653466999*************************97. PP AA1_3.hmm 65 nGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefratqyGt 110 + tsiH HGi q ntn +DG + vtqC i+pg sftYe++++q Gt 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 60 QSTSIHAHGIFQRNTNYMDGPAMVTQCGIPPGGSFTYEYQINQAGT 105 78******************************************** PP AA1_3.hmm 111 swYHsHyslQyadGvlGplvinGPasanydvdlgp.llltdwshes 155 w H H Q +dG+ pl+++ +s ++ +d + + l+dw++ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 106 FWLHGHDHHQNSDGLRTPLIVRDKHSPPFYYDKEYiFSLEDWYNAP 151 **************************9999998651569******* PP AA1_3.hmm 156 afelveeae....asggppvadniLingknkvkkskkeeegeysev 197 ++e ++++ +p+ Ling n +++ + 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 152 FSERLADTLdpnkPFPPEPSYPHALINGYNGNHT---------GPL 188 999988888443222334677899****998776.........457 PP AA1_3.hmm 198 klekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttd 243 +e gk+yr+rlin s+ ++fkf++ +H+++vi+aD v p +d 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 189 LFEVGKTYRIRLINMSTTEWFKFAMSNHQMKVIEADGVYSVPAPVD 234 8999****************************************** PP AA1_3.hmm 244 slligigqRydviveanqe.eenyw 267 +++g gqRy ++v+a+++ + ny 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 235 GVTLGPGQRYSILVSAHSNsNYNYK 259 ****************998644443 PP == domain 2 score: -3.6 bits; conditional E-value: 1.1 AA1_3.hmm 220 fsidgHkltviaaDfvpie 238 +++ gH++++i+ + ie 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 409 MHLHGHTFQIIEYGPIDIE 427 5688999999987666665 PP == domain 3 score: 1.7 bits; conditional E-value: 0.027 AA1_3.hmm 97 esftYefratqyGtswYHsHyslQyadGvl 126 + ++ +fra++ G +H H + ++ G++ 94807|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 460 QYVKLRFRADNPGVWLFHCHMDIHFGMGMA 489 556779***************999999985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (551 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 107.99 // Query: 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 [L=555] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-93 301.4 0.5 3.2e-93 301.1 0.5 1.0 1 AA1.hmm 2.6e-90 290.9 0.5 8.4e-89 285.9 0.0 2.4 2 AA1_2.hmm 1.9e-58 186.1 0.3 4.1e-57 181.7 0.1 2.3 3 AA1_3.hmm 6e-57 181.1 0.0 8.7e-57 180.5 0.0 1.2 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 301.1 0.5 3.2e-93 3.2e-93 7 358 .] 35 499 .. 24 499 .. 0.83 Alignments for each domain: == domain 1 score: 301.1 bits; conditional E-value: 3.2e-93 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhG 50 +r++i vNg++P P ++a+egDt+v+tV+N+l +++t+iH hG 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 35 KSRTAIGVNGKLPIPPVYADEGDTLVLTVHNSL-NHSTSIHAHG 77 5789****************************9.89******** PP AA1.hmm 51 lrqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsH 94 + q+g+n++DG+a+vtqc i+pg+sftYe++++ q+Gtyw H H 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 78 ILQTGSNFMDGAAMVTQCGIPPGDSFTYEIHLN-QTGTYWLHGH 120 ********************************9.********** PP AA1.hmm 95 vslqyadGlrGaliirdpkskekydvddeelvillsdwyhktae 138 adGlr +l+ird+ k+ y +d +e + l+dwy + + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 121 DHDELADGLRTPLVIRDK--KSPYSYD-NEYLLGLEDWYDAPFQ 161 ****************87..4445555.889************* PP AA1.hmm 139 ell.....kenatgaepapdsllinGkgrlyncssklevlkvep 177 e + +++ +p +linG+++ + + + + p 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 162 ERMdlttdPTKPFPPPPSYPYALINGANAN--FT---QPMVFVP 200 9997643322223333335789*****873..33...3699*** PP AA1.hmm 178 gktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdsl 221 g tyr+rl+n+a+ + ++fs+ +H++ vieaDgvy +p+ + + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 201 GSTYRIRLVNMAATEWFKFSMPGHEMFVIEADGVYSDPFAIAAM 244 ******************************************** PP AA1.hmm 222 qiapGqrydvllkanqsa...gnywiraslds.....aafdntt 257 +i+pGqry+vl+ka++++ +y+i+ ++s + ++ + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 245 TIGPGQRYSVLVKAHNTNtlnYQYLIEL-YASfvphiDGMNPRY 287 *************888874434666666.555655543789999 PP AA1.hmm 258 alailrYkgassas.............................. 271 ++ ++Y+++ + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 288 YSGAIHYSANAVEVaadkqealrqipedvslawdwdiqlqsrah 331 9******8843322566667899999999999999999999999 PP AA1.hmm 272 .............................nvsfvepstslleay 286 n s++ p+++ l + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 332 npllpatrsfdvviggahfsdgvtrdlinNSSYAPPTVPSLYTA 375 ****************************9999999999988776 PP AA1.hmm 287 sgv........detka.............klkln.......... 299 +++ + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 376 KSTgqwaqnstV---YgpnsnaividyweS---Vefvihnpsrl 413 555556543330...144444455555552...04446667777 PP AA1.hmm 300 .hp..lhghdfvvvnfd.aedeak.................... 319 h hg++f +v++ ++d 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 414 pHAmhQHGYTFQIVEYGpIDDSVAisqgsippdtpaplrrfdrw 457 7777799*******88874444334556777888889999999* PP AA1.hmm 320 ...rdtvavpkggwvvirfvadnpgvwllhchieaHlsmGla 358 rdtv+v + +v irf+a+n+gvwl hchi aH G+a 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 458 pmeRDTVVVLPMQYVKIRFRANNIGVWLHHCHILAHQRLGMA 499 *****************************************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 285.9 0.0 8.4e-89 8.4e-89 2 336 .. 37 380 .. 36 381 .. 0.89 2 ? 2.7 0.2 0.012 0.012 22 67 .. 401 447 .. 390 510 .. 0.65 Alignments for each domain: == domain 1 score: 285.9 bits; conditional E-value: 8.4e-89 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlf 45 r++igvNg+ P+p++ +++gd+++++++N+l +++ts+H+HG+ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 37 RTAIGVNGKLPIPPVYADEGDTLVLTVHNSL-NHSTSIHAHGIL 79 899****************************.89********** PP AA1_2.hmm 46 qngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHsk 89 q g+n mDGa+mvtqC+ippg+++tYe+++ +q+GtYW+H+H + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 80 QTGSNFMDGAAMVTQCGIPPGDSFTYEIHL-NQTGTYWLHGHDH 122 ******************************.************* PP AA1_2.hmm 90 gqYeDGlrgpliiedkeepyeydeeltltlsdwYheeskelvke 133 + DGlr+pl+i+dk++py+yd+e+ l l dwY +e ++ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 123 DELADGLRTPLVIRDKKSPYSYDNEYLLGLEDWYDAPFQERMDL 166 ******************************************** PP AA1_2.hmm 134 flskynptgaepipdsllv...netenatlevepgktYllriin 174 + +++p p +l+ n + ++ + + pg tY++r++n 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 167 TTDPTKPFPPPPSYPYALIngaNANFTQPMVFVPGSTYRIRLVN 210 *******99998766666633334444557899*********** PP AA1_2.hmm 175 vgafasqylvledhemtivevDGvdvepsevdslyiavaQRysv 218 ++a + +++ +hem ++e+DGv+ +p + +++i +QRysv 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 211 MAATEWFKFSMPGHEMFVIEADGVYSDPFAIAAMTIGPGQRYSV 254 ******************************************** PP AA1_2.hmm 219 Lvkakndtsknyalvakmdetmldvvpddlqlnvtstlvydksa 262 Lvka+n+++ ny+ + ++ + + + +++ + y+++a 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 255 LVKAHNTNTLNYQYLIELYASFVPHIDGMNPRYYSGAIHYSANA 298 *********************99999888888999999999988 PP AA1_2.hmm 263 alaeastvdel........eald.Dfkleplekeelleepdkei 297 + +a + ++l a d D++l++ + + l +++++ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 299 VEVAADKQEALrqipedvsLAWDwDIQLQSRAH-NPLLPATRSF 341 776665333332113222333345788888888.5555678999 PP AA1_2.hmm 298 eldvemdnlkdgvnyaffNnitYvapkvptlltvlssge 336 ++ + +++dgv++ ++Nn +Y p+vp+l+t+ s+g+ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 342 DVVIGGAHFSDGVTRDLINNSSYAPPTVPSLYTAKSTGQ 380 999********************************9985 PP == domain 2 score: 2.7 bits; conditional E-value: 0.012 AA1_2.hmm 22 drvevkltNgledentslHfHGlfqngt..namDGasmvtqCpi 63 ++ve ++N + ++H HG ++ +D +++++q +i 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 401 ESVEFVIHNPS-RLPHAMHQHGYTFQIVeyGPIDDSVAISQGSI 443 55555666654.45788999999887662356899999999999 PP AA1_2.hmm 64 ppge 67 pp++ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 444 PPDT 447 9976 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 181.7 0.1 4.1e-57 4.1e-57 17 299 .. 21 301 .. 13 312 .. 0.84 2 ? -3.8 0.0 1.2 1.2 70 109 .. 418 430 .. 392 446 .. 0.65 3 ? 1.7 0.0 0.026 0.026 95 131 .. 468 504 .. 464 507 .. 0.84 Alignments for each domain: == domain 1 score: 181.7 bits; conditional E-value: 4.1e-57 AA1_3.hmm 17 tlevtestlapDGveke.allvngqyPgptieadWGDtlevtvk 59 +++v ++++ DG++ + a+ vng++P p + ad GDtl++tv+ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 21 KWDVGYVQVNRDGYKSRtAIGVNGKLPIPPVYADEGDTLVLTVH 64 67888999******655499************************ PP AA1_3.hmm 60 nnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYef 103 n+l+ + tsiH HGi q+ +n +DG++ vtqC i+pg+sftYe 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 65 NSLN-HSTSIHAHGILQTGSNFMDGAAMVTQCGIPPGDSFTYEI 107 ***8.68************************************* PP AA1_3.hmm 104 ratqyGtswYHsHyslQyadGvlGplvinGPasanydvdlg.pl 146 + +q Gt w H H adG+ plvi+ +++y +d + l 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 108 HLNQTGTYWLHGHDHDELADGLRTPLVIRDK-KSPYSYDNEyLL 150 ****************************975.456666665146 PP AA1_3.hmm 147 lltdwshesafelveeae....asggppvadniLingknkvkks 186 l+dw+ ++e ++ ++ pp+ Ling n + + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 151 GLEDWYDAPFQERMDLTTdptkPFPPPPSYPYALINGANANFT- 193 69*******999999888654333445777889****998776. PP AA1_3.hmm 187 kkeeegeysevklekgkkyrlrlintsvdstfkfsidgHkltvi 230 + + + +g +yr+rl+n ++ ++fkfs+ gH++ vi 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 194 --------QPMVFVPGSTYRIRLVNMAATEWFKFSMPGHEMFVI 229 ........5689******************************** PP AA1_3.hmm 231 aaDfvpiepyttdslligigqRydviveanqe...eenywlrae 271 +aD v p+ ++ig gqRy v+v+a+++ + +y + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 230 EADGVYSDPFAIAAMTIGPGQRYSVLVKAHNTntlNYQYLIELY 273 *****************************999755555555444 PP AA1_3.hmm 272 laeaCsklnaeekeikailrYeeassae 299 + + + + + ++Y+++ + 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 274 ASFVPHIDGMNPRYYSGAIHYSANAVEV 301 3332333236777778888888776655 PP == domain 2 score: -3.8 bits; conditional E-value: 1.2 AA1_3.hmm 70 HwHGirqlntneqDGvpgvtqCpiapgesftYefratqyG 109 H H Y+f++ +yG 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 418 HQH---------------------------GYTFQIVEYG 430 444...........................4555555555 PP == domain 3 score: 1.7 bits; conditional E-value: 0.026 AA1_3.hmm 95 pgesftYefratqyGtswYHsHyslQyadGvlGplvi 131 p + ++ +fra++ G +H H+ + G++ ++v+ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 468 PMQYVKIRFRANNIGVWLHHCHILAHQRLGMAMTVVV 504 66778889***************99999888877765 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 180.5 0.0 8.7e-57 8.7e-57 2 244 .. 30 267 .. 29 318 .. 0.82 Alignments for each domain: == domain 1 score: 180.5 bits; conditional E-value: 8.7e-57 AA1_1.hmm 2 spDGf.srsavlvngtfpgplitgkkgdkfkinvvneLtdetml 44 + DG+ sr+a+ vng+ p p + + +gd++ ++v+n+L+ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 30 NRDGYkSRTAIGVNGKLPIPPVYADEGDTLVLTVHNSLN----- 68 679984699***************************986..... PP AA1_1.hmm 45 kstsihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdq 88 +stsih hg++q+g+n++dg+a+vtqC i pg+sf+y++++ +q 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 69 HSTSIHAHGILQTGSNFMDGAAMVTQCGIPPGDSFTYEIHL-NQ 111 68**************************************9.8* PP AA1_1.hmm 89 aGtfwYHshlstqycdglrGalvvydpedplkslydvddestvi 132 +Gt+w H h + + dglr +lv+ d++ p+ d+ + ++ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 112 TGTYWLHGHDHDELADGLRTPLVIRDKKSPYS----YDN-EYLL 150 ***************************99964....444.5789 PP AA1_1.hmm 133 tladwyhtaakell..........klvavadstlinGlgryagg 166 l dwy + +e + ++ +linG ++ 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 151 GLEDWYDAPFQERMdlttdptkpfPPPPSYPYALINGANANFTQ 194 ******99998887777887765444456667899997655444 PP AA1_1.hmm 167 peaelavvnvekgkrYrfrlvsiscdpnftfsidghnltviead 210 p ++ g Yr+rlv++++++ f+fs+ gh++ viead 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 195 P---MV---FVPGSTYRIRLVNMAATEWFKFSMPGHEMFVIEAD 232 4...33...34899****************************** PP AA1_1.hmm 211 gvntkpltvdsiqifagqrysvvleanqevd.nYw 244 gv ++p + ++i gqrysv+++a ++ nY 503559|Coemoj1_GeneCatalog_proteins_20180326.aa.fasta|AA1_2|AA1_2 233 GVYSDPFAIAAMTIGPGQRYSVLVKAHNTNTlNYQ 267 *************************9665433653 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (555 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 88.26 // Query: 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 [L=563] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-101 328.8 0.1 1.6e-101 328.5 0.1 1.0 1 AA1.hmm 1.7e-99 321.0 0.2 1.1e-97 315.1 0.0 2.6 3 AA1_2.hmm 1.1e-61 196.7 0.2 3.4e-60 191.9 0.1 2.1 2 AA1_3.hmm 8.1e-57 180.6 0.1 1.6e-56 179.6 0.0 1.4 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 328.5 0.1 1.6e-101 1.6e-101 8 358 .] 42 507 .. 33 507 .. 0.84 Alignments for each domain: == domain 1 score: 328.5 bits; conditional E-value: 1.6e-101 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrq 53 +r+vi vNg++P P ++++egDt+v++V+N+l + +t+iH hG++q 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 42 SREVIGVNGKLPIPPVHVTEGDTLVLHVHNSL-NVSTSIHAHGIFQ 86 699****************************9.89*********** PP AA1.hmm 54 lgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqy 99 +t ++DG+a+vtqc i+pgksftYe +v+ qaGt+w H H+ q+ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 87 INTSYMDGAAMVTQCGIPPGKSFTYEYEVN-QAGTFWLHGHYHHQN 131 *****************************9.*************** PP AA1.hmm 100 adGlrGaliirdpkskekydvddeelvillsdwyhktaeell.... 141 adGlr +li++d k++ y++d e v+ ++dwy+++ +e l 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 132 ADGLRTPLIVHDRKQH-PYKYD-GEYVFAFEDWYKESFAERLalti 175 ***********76444.58877.899***********999996764 PP AA1.hmm 142 .kenatgaepa..pdsllinGkgrlyncssklevlkvepgktyrlr 184 + +++ +p+ + ++linG ++++ ++++p++tyr+r 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 176 dP--KKSFPPEspAPNALINGVDG-----NATKPISFKPKRTYRIR 214 32..333344466899******44.....233579*********** PP AA1.hmm 185 linaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqryd 230 lin+++ ++f++ +H++ vieaDg+y p+evd ++++pGqr++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 215 LINMSAVVWFKFALPGHQMRVIEADGKYSVPLEVDGVTLGPGQRFS 260 ********************************************** PP AA1.hmm 231 vllkanqsa.gnywira.slds...a...afdnttalailrYkgas 268 vl++a+++ +ny + ++s + + + ++i++Y+++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 261 VLVTAHEDItRNYQYLVeIFASffsRipgE-SPKYHTGIVEYNKDA 305 ****99998547666664566676514533.78999******9976 PP AA1.hmm 269 sas........................................... 271 s + 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 306 SLDvvdtisvleaipedksfsgytdvelsalerqpafpvdrsidlv 351 666888888899999999999999999******************* PP AA1.hmm 272 ................nvsfvepstslleay.sgv........... 289 n++++ep++++l ++ s 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 352 lggafymnnvpgdiinNITYAEPHIPTLYSAlS-Lgslavdkdlyg 396 ************************999988531.234555555566 PP AA1.hmm 290 ...detka....klkln..............hp..lhghdfvvvnf 312 + + + n hp lhgh f ++++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 397 iqsN---TivlkH---NesielvvynpiripHPmhLHGHAFQLIEY 436 4330...143330...244444466677777*************77 PP AA1.hmm 313 d........aedeak.....................rdtvavpkgg 329 + + rdtv++p+ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 437 GpvdprmvlS----EnregfsnqtapivraseypmeRDTVVIPTMQ 478 7555555542....0233466677788888999999********** PP AA1.hmm 330 wvvirfvadnpgvwllhchieaHlsmGla 358 +v +rf+adnpgvwl+hch++ H+ mG+a 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 479 YVKLRFRADNPGVWLFHCHMDIHFGMGMA 507 ****************************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 315.1 0.0 1.1e-97 1.1e-97 1 335 [. 42 386 .. 42 388 .. 0.93 2 ? -1.1 0.1 0.16 0.16 15 47 .. 401 432 .. 398 439 .. 0.83 3 ? 2.6 0.0 0.012 0.012 65 101 .. 476 511 .. 471 521 .. 0.81 Alignments for each domain: == domain 1 score: 315.1 bits; conditional E-value: 1.1e-97 AA1_2.hmm 1 errvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfq 46 +r+vigvNg+ P+p+++v++gd+++++++N+l + +ts+H+HG+fq 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 42 SREVIGVNGKLPIPPVHVTEGDTLVLHVHNSL-NVSTSIHAHGIFQ 86 599*****************************.99*********** PP AA1_2.hmm 47 ngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqY 92 +t++mDGa+mvtqC+ippg+++tYe++v +q+Gt+W+H+H++ q 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 87 INTSYMDGAAMVTQCGIPPGKSFTYEYEV-NQAGTFWLHGHYHHQN 131 *****************************.**************** PP AA1_2.hmm 93 eDGlrgpliiedke.epyeydeeltltlsdwYheeskelvkeflsk 137 DGlr+pli++d++ +py+yd e++++ dwY+e+ e ++ + + 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 132 ADGLRTPLIVHDRKqHPYKYDGEYVFAFEDWYKESFAERLALTIDP 177 ************88799*******************9999987777 PP AA1_2.hmm 138 ynp.tgaepipdsllvnetenat..levepgktYllriinvgafas 180 +++ + p p++l+ + nat ++++p++tY++r+in++a++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 178 KKSfPPESPAPNALINGVDGNATkpISFKPKRTYRIRLINMSAVVW 223 665156779999988766555543499******************* PP AA1_2.hmm 181 qylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndt 226 + ++l +h+m+++e+DG + p evd +++ +QR+svLv+a++d 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 224 FKFALPGHQMRVIEADGKYSVPLEVDGVTLGPGQRFSVLVTAHEDI 269 ********************************************** PP AA1_2.hmm 227 sknyalvakmdetmldvvpddlqlnvtstlvydksaalaeastv.. 270 ++ny+ + ++ + + +p + ++t ++y+k+a+l+ t+ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 270 TRNYQYLVEIFASFFSRIPGESPKYHTGIVEYNKDASLDVVDTIsv 315 *************************************999986656 PP AA1_2.hmm 271 .......delealdDfkleplekeelleepdkeieldvemdnlkdg 309 ++++ + D++l++le++++ +d++i+l + + ++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 316 leaipedKSFSGYTDVELSALERQPA-FPVDRSIDLVLGGAFYMNN 360 6666766667999**********555.569**************** PP AA1_2.hmm 310 vnyaffNnitYvapkvptlltvlssg 335 v+ ++NnitY +p++ptl+++ls g 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 361 VPGDIINNITYAEPHIPTLYSALSLG 386 ***********************987 PP == domain 2 score: -1.1 bits; conditional E-value: 0.16 AA1_2.hmm 15 eievnkgdrvevkltNgledentslHfHGlfqn 47 +i ++++++e+ ++N + + +H HG ++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 401 TIVLKHNESIELVVYNPI-RIPHPMHLHGHAFQ 432 678899999********9.67889999997654 PP == domain 3 score: 2.6 bits; conditional E-value: 0.012 AA1_2.hmm 65 pgetltYeftveeqvGtYWyHsHskgqYeDGlrgpli 101 + ++ +f++ ++ G + +H+H++ ++ G+ ++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 476 TMQYVKLRFRA-DNPGVWLFHCHMDIHFGMGMAMTFV 511 55555666777.99******************98887 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 191.9 0.1 3.4e-60 3.4e-60 17 297 .. 28 306 .. 18 317 .. 0.87 2 ? 2.5 0.0 0.015 0.015 95 126 .. 476 507 .. 471 516 .. 0.84 Alignments for each domain: == domain 1 score: 191.9 bits; conditional E-value: 3.4e-60 AA1_3.hmm 17 tlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnl 62 +++v + ++ G ++e++ vng++P p ++ GDtl+++v+n+l 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 28 NWDVGYVYADHIGGSREVIGVNGKLPIPPVHVTEGDTLVLHVHNSL 73 5566666666779999****************************** PP AA1_3.hmm 63 kknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefratqy 108 + tsiH HGi q+nt+ +DG++ vtqC i+pg+sftYe++++q 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 74 N-VSTSIHAHGIFQINTSYMDGAAMVTQCGIPPGKSFTYEYEVNQA 118 7.78****************************************** PP AA1_3.hmm 109 GtswYHsHyslQyadGvlGplvinGPasanydvdlgp.llltdwsh 153 Gt w H Hy Q adG+ pl+++ ++++y +d + + ++dw++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 119 GTFWLHGHYHHQNADGLRTPLIVHDRKQHPYKYDGEYvFAFEDWYK 164 **********************************8651568***** PP AA1_3.hmm 154 esafelveeae....asggppvadniLingknkvkkskkeeegeys 195 es+ e ++ + + + a n Ling +++ + 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 165 ESFAERLALTIdpkkSFPPESPAPNALINGVDGNAT---------K 201 **88877666656333334456789*****877666.........5 PP AA1_3.hmm 196 evklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyt 241 ++++++++yr+rlin s+ +fkf++ gH+++vi+aD p + 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 202 PISFKPKRTYRIRLINMSAVVWFKFALPGHQMRVIEADGKYSVPLE 247 799******************************************* PP AA1_3.hmm 242 tdslligigqRydviveanqe.eenywlraelaea.Cskln.aeek 284 +d +++g gqR+ v+v+a+++ ++ny +e+ ++ s++ ++ k 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 248 VDGVTLGPGQRFSVLVTAHEDiTRNYQYLVEIFASfFSRIPgESPK 293 *********************9888866555554425555338889 PP AA1_3.hmm 285 eikailrYeeass 297 +++i++Y+++ s 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 294 YHTGIVEYNKDAS 306 99******99876 PP == domain 2 score: 2.5 bits; conditional E-value: 0.015 AA1_3.hmm 95 pgesftYefratqyGtswYHsHyslQyadGvl 126 + ++ +fra++ G +H H + ++ G++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 476 TMQYVKLRFRADNPGVWLFHCHMDIHFGMGMA 507 55667789****************99999986 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 179.6 0.0 1.6e-56 1.6e-56 5 243 .. 40 273 .. 37 310 .. 0.85 2 ? -4.0 0.0 1.4 1.4 87 108 .. 487 508 .. 479 514 .. 0.78 Alignments for each domain: == domain 1 score: 179.6 bits; conditional E-value: 1.6e-56 AA1_1.hmm 5 GfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsih 50 G sr+++ vng+ p p ++ ++gd++ ++v+n+L+ stsih 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 40 GGSREVIGVNGKLPIPPVHVTEGDTLVLHVHNSLN-----VSTSIH 80 678*****************************986.....79**** PP AA1_1.hmm 51 whglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHs 96 hg+fq +t+++dg+a+vtqC i pg+sf+y+++v +qaGtfw H 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 81 AHGIFQINTSYMDGAAMVTQCGIPPGKSFTYEYEV-NQAGTFWLHG 125 **********************************9.8********* PP AA1_1.hmm 97 hlstqycdglrGalvvydpedplkslydvddestvitladwyhtaa 142 h++ q dglr +l+v+d++ ++ y d + v+ + dwy ++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 126 HYHHQNADGLRTPLIVHDRK---QHPYKYD-GEYVFAFEDWYKESF 167 ****************8765...4555555.5579*******9886 PP AA1_1.hmm 143 kell........klv..avadstlinGlgryaggpeaelavvnvek 178 e l +++ a +linG+ a+ ++ + 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 168 AERLaltidpkkSFPpeSPAPNALINGVDGNAT------KPISFKP 207 666557787755233112233457777644333......3478899 PP AA1_1.hmm 179 gkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqi 224 ++ Yr+rl+++s+ f+f++ gh++ vieadg + pl+vd +++ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 208 KRTYRIRLINMSAVVWFKFALPGHQMRVIEADGKYSVPLEVDGVTL 253 9********************************************* PP AA1_1.hmm 225 fagqrysvvleanqevd.nY 243 gqr+sv+++a +++ nY 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 254 GPGQRFSVLVTAHEDITrNY 273 ************99875366 PP == domain 2 score: -4.0 bits; conditional E-value: 1.4 AA1_1.hmm 87 dqaGtfwYHshlstqycdglrG 108 d+ G + +H h+ + g+ 82293|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 487 DNPGVWLFHCHMDIHFGMGMAM 508 7789999****99988777655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (563 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 104.92 // Query: 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 [L=505] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.6e-93 301.0 0.5 4.2e-93 300.8 0.5 1.0 1 AA1.hmm 2.3e-88 284.4 1.4 5.6e-87 279.9 0.0 2.5 3 AA1_2.hmm 1.7e-57 183.0 0.4 4.6e-56 178.3 0.3 2.2 2 AA1_3.hmm 1.1e-53 170.4 0.4 2.2e-53 169.4 0.2 1.6 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 300.8 0.5 4.2e-93 4.2e-93 26 358 .] 2 449 .. 1 449 [. 0.83 Alignments for each domain: == domain 1 score: 300.8 bits; conditional E-value: 4.2e-93 AA1.hmm 26 negDtvvvtVtNklesegttiHwhGlrqlgtnwaDGvagvtqcpiap 72 +egDt+v++V+N+l + +t+iH hG++q +t ++DG+a+vtqc i+p 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 2 TEGDTLVLHVHNSL-NVSTSIHAHGIFQINTSYMDGAAMVTQCGIPP 47 79***********9.89****************************** PP AA1.hmm 73 gksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpkskekyd 119 gksftYe +v+ qaGt+w H H+ q+adGlr +li++d +++ y+ 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 48 GKSFTYEYEVN-QAGTFWLHGHYHHQNADGLRTPLIVHDR-KQHLYE 92 **********9.**************************75.455688 PP AA1.hmm 120 vddeelvillsdwyhktaeell..kenatgaepa...pdsllinGk. 160 +d e v+ ++dwy++t e+ l +++ +g+ p + ++linG 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 93 YD-GEYVFGFEDWYNQTYEARLdeTQDPNGTFPPpspAPNALINGId 138 87.889**************9975333455554456779*******4 PP AA1.hmm 161 grlyncssklevlkvepgktyrlrlinaalnaeltfsidnHkltvie 207 g++ ++++ ++++ktyr+rlin+++ ++f++ +H++ vie 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 139 GNV------TKSILFKSNKTYRIRLINMSATVWFKFALPGHQMRVIE 179 432......3589********************************** PP AA1.hmm 208 aDgvyvkpyevdslqiapGqrydvllkanqsa.gnywira.slds.. 250 aDg+y p+ev+ ++++pGqr++vl++a+++ +ny + ++s 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 180 ADGKYAVPLEVNGITLGPGQRFSVLVTAHEDItRNYQYLVeVFASff 226 ***************************99998547666665577777 PP AA1.hmm 251 .a...afdnttalailrYkgassas...................... 271 + + + + ++++Y+++ s 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 227 pKipgE-SPKYYAGVVEYSENAS-Fvdvdsiaileaipedksfsgca 271 625533.678889*****77543.25788888888888889999999 PP AA1.hmm 272 ......................................nvsfvepst 280 n++++ep + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 272 dvelssadrqpvfpvnrsidlvlrgalftdnitrdiinNITYTEPYI 318 99999999999999*99999*****************9999****99 PP AA1.hmm 281 slleay.sgv............detka.klkln.............. 299 ++l ++ s +++ a lk n 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 319 PTLYSAlS-LgslavdkdlygiQSN-AvVLKHNeyielvvhnpntip 363 98877531.2344555555554222.243333466667777889999 PP AA1.hmm 300 hp..lhghdfvvvnfd...........aedeak.............. 319 hp lhgh f ++++ + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 364 HPmhLHGHAFQIIEYGpvdprivlgdnR----Eslsnqtapivkssk 406 *************666555666654331....134456667888888 PP AA1.hmm 320 ....rdtvavpkggwvvirfvadnpgvwllhchieaHlsmGla 358 rdtv+vp +v +rf+adnpgvwl+hch++ H+ mG+a 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 407 ypmqRDTVVVPIMQYVKLRFRADNPGVWLFHCHMDIHFGMGMA 449 8999**************************************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 279.9 0.0 5.6e-87 5.6e-87 19 335 .. 2 328 .. 1 330 [. 0.91 2 ? -2.4 0.2 0.41 0.41 22 192 .. 350 375 .. 342 382 .. 0.52 3 ! 3.1 0.0 0.0089 0.0089 71 102 .. 424 454 .. 413 469 .. 0.81 Alignments for each domain: == domain 1 score: 279.9 bits; conditional E-value: 5.6e-87 AA1_2.hmm 19 nkgdrvevkltNgledentslHfHGlfqngtnamDGasmvtqCpipp 65 ++gd+++++++N+l + +ts+H+HG+fq +t++mDGa+mvtqC+ipp 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 2 TEGDTLVLHVHNSL-NVSTSIHAHGIFQINTSYMDGAAMVTQCGIPP 47 68************.99****************************** PP AA1_2.hmm 66 getltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedke.epyey 111 g+++tYe++v +q+Gt+W+H+H++ q DGlr+pli++d++ + yey 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 48 GKSFTYEYEV-NQAGTFWLHGHYHHQNADGLRTPLIVHDRKqHLYEY 93 **********.****************************985678** PP AA1_2.hmm 112 deeltltlsdwYheeskelvkeflskynptgae..pipdsllv..ne 154 d e+++ dwY+++++ ++e + n t p p++l+ + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 94 DGEYVFGFEDWYNQTYEARLDETQDP-NGTFPPpsPAPNALINgiDG 139 ******************99998654.45555501455555543344 PP AA1_2.hmm 155 tenatlevepgktYllriinvgafasqylvledhemtivevDGvdve 201 + + ++ ++ +ktY++r+in++a + + ++l +h+m+++e+DG + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 140 NVTKSILFKSNKTYRIRLINMSATVWFKFALPGHQMRVIEADGKYAV 186 5566799**************************************** PP AA1_2.hmm 202 psevdslyiavaQRysvLvkakndtsknyalvakmdetmldvvpddl 248 p ev+ +++ +QR+svLv+a++d ++ny+ + ++ + + +p + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 187 PLEVNGITLGPGQRFSVLVTAHEDITRNYQYLVEVFASFFPKIPGES 233 *********************************************** PP AA1_2.hmm 249 qlnvtstlvydksaalaeastv.........delealdDfkleplek 286 ++ +++y+++a+ + + ++++ + D++l+++++ 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 234 PKYYAGVVEYSENASFVDVDSIaileaipedKSFSGCADVELSSADR 280 ***************9999855456666766677999********** PP AA1_2.hmm 287 eelleepdkeieldvemdnlkdgvnyaffNnitYvapkvptlltvls 333 + + ++++i+l ++ ++d++++ ++NnitY++p +ptl+++ls 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 281 -QPVFPVNRSIDLVLRGALFTDNITRDIINNITYTEPYIPTLYSALS 326 .5566789**************************************9 PP AA1_2.hmm 334 sg 335 g 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 327 LG 328 87 PP == domain 2 score: -2.4 bits; conditional E-value: 0.41 AA1_2.hmm 22 drvevkltNgledentslHfHGlfqngtnamDGasmvtqCpippget 68 + +e+ ++N + + +H HG 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 350 EYIELVVHNPN-TIPHPMHLHGH------------------------ 371 44444444442.34555555554........................ PP AA1_2.hmm 69 ltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeepyeydeel 115 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 - ----------------------------------------------- - ............................................... PP AA1_2.hmm 116 tltlsdwYheeskelvkeflskynptgaepipdsllvnetenatlev 162 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 - ----------------------------------------------- - ............................................... PP AA1_2.hmm 163 epgktYllriinvgafasqylvledhemti 192 ++i 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 372 --------------------------AFQI 375 ..........................4444 PP == domain 3 score: 3.1 bits; conditional E-value: 0.0089 AA1_2.hmm 71 YeftveeqvGtYWyHsHskgqYeDGlrgplii 102 +f++ ++ G + +H+H++ ++ G+ +i 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 424 LRFRA-DNPGVWLFHCHMDIHFGMGMAMTFIE 454 45666.899*****************999985 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 178.3 0.3 4.6e-56 4.6e-56 51 296 .. 4 247 .. 2 256 .. 0.88 2 ? 2.1 0.0 0.02 0.02 98 126 .. 421 449 .. 414 460 .. 0.83 Alignments for each domain: == domain 1 score: 178.3 bits; conditional E-value: 4.6e-56 AA1_3.hmm 51 GDtlevtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapge 97 GDtl+++v+n+l+ tsiH HGi q+nt+ +DG++ vtqC i+pg+ 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 4 GDTLVLHVHNSLN-VSTSIHAHGIFQINTSYMDGAAMVTQCGIPPGK 49 9***********7.78******************************* PP AA1_3.hmm 98 sftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydvdlg 144 sftYe++++q Gt w H Hy Q adG+ pl+++ +++ y++d + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 50 SFTYEYEVNQAGTFWLHGHYHHQNADGLRTPLIVHDRKQHLYEYDGE 96 *********************************************97 PP AA1_3.hmm 145 pll.ltdwshesafelveeae....asggppvadniLingknkvkks 186 ++ ++dw+++++++ ++e++ + p a n Ling + + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 97 YVFgFEDWYNQTYEARLDETQdpngTFPPPSPAPNALINGIDGNVT- 142 66549*************9997654445567789******876655. PP AA1_3.hmm 187 kkeeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaD 233 +++ ++++k+yr+rlin s+ +fkf++ gH+++vi+aD 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 143 --------KSILFKSNKTYRIRLINMSATVWFKFALPGHQMRVIEAD 181 ........5799*********************************** PP AA1_3.hmm 234 fvpiepyttdslligigqRydviveanqe.eenywlraelaea..Cs 277 p +++ +++g gqR+ v+v+a+++ ++ny +e+ ++ + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 182 GKYAVPLEVNGITLGPGQRFSVLVTAHEDiTRNYQYLVEVFASffPK 228 ****************************9977776555544432133 PP AA1_3.hmm 278 klnaeekeikailrYeeas 296 ++ k +++++Y+e+ 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 229 IPGESPKYYAGVVEYSENA 247 3346777778888887765 PP == domain 2 score: 2.1 bits; conditional E-value: 0.02 AA1_3.hmm 98 sftYefratqyGtswYHsHyslQyadGvl 126 ++ +fra++ G +H H + ++ G++ 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 421 YVKLRFRADNPGVWLFHCHMDIHFGMGMA 449 45679****************99999986 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 169.4 0.2 2.2e-53 2.2e-53 26 243 .. 3 215 .. 1 224 [. 0.86 2 ? -3.7 0.0 1.1 1.1 86 107 .. 428 449 .. 417 461 .. 0.77 Alignments for each domain: == domain 1 score: 169.4 bits; conditional E-value: 2.2e-53 AA1_1.hmm 26 kgdkfkinvvneLtdetmlkstsihwhglfqkgtnwadgpafvtqCP 72 +gd++ ++v+n+L+ stsih hg+fq +t+++dg+a+vtqC 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 3 EGDTLVLHVHNSLN-----VSTSIHAHGIFQINTSYMDGAAMVTQCG 44 79999999999875.....79************************** PP AA1_1.hmm 73 iapgnsflydfkvpdqaGtfwYHshlstqycdglrGalvvydpedpl 119 i pg+sf+y+++v +qaGtfw H h++ q dglr +l+v+d + 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 45 IPPGKSFTYEYEV-NQAGTFWLHGHYHHQNADGLRTPLIVHD---RK 87 ************9.8*************************65...56 PP AA1_1.hmm 120 kslydvddestvitladwyhtaakell..........klvavadstl 156 ++ly+ d e v+ + dwy ++ ++ l + a +l 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 88 QHLYEYDGE-YVFGFEDWYNQTYEARLdetqdpngtfPPPSPAPNAL 133 899999876.699******9988777756666665332233444567 PP AA1_1.hmm 157 inGlgryaggpeaelavvnvekgkrYrfrlvsiscdpnftfsidghn 203 inG+ + + +++k Yr+rl+++s++ f+f++ gh+ 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 134 INGIDGNV------TKSILFKSNKTYRIRLINMSATVWFKFALPGHQ 174 77764333......34577899************************* PP AA1_1.hmm 204 ltvieadgvntkpltvdsiqifagqrysvvleanqevd.nY 243 + vieadg pl+v+ i++ gqr+sv+++a +++ nY 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 175 MRVIEADGKYAVPLEVNGITLGPGQRFSVLVTAHEDITrNY 215 *********************************99875366 PP == domain 2 score: -3.7 bits; conditional E-value: 1.1 AA1_1.hmm 86 pdqaGtfwYHshlstqycdglr 107 +d+ G + +H h+ + g+ 9715|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 428 ADNPGVWLFHCHMDIHFGMGMA 449 4778999999999988876665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (505 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 98.30 // Query: 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 [L=549] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.9e-93 299.3 0.3 1e-91 295.5 0.0 2.4 3 AA1_2.hmm 1.7e-85 275.8 0.2 2.2e-85 275.4 0.2 1.0 1 AA1.hmm 6.6e-53 167.8 0.0 1.2e-52 166.9 0.0 1.4 2 AA1_1.hmm 1.6e-50 160.1 0.0 1.3e-48 153.8 0.0 2.2 2 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 295.5 0.0 1e-91 1e-91 2 336 .. 39 375 .. 38 376 .. 0.94 2 ? -0.6 0.2 0.12 0.12 16 51 .. 390 424 .. 384 440 .. 0.78 3 ? -0.0 0.0 0.079 0.079 62 89 .. 454 480 .. 446 492 .. 0.90 Alignments for each domain: == domain 1 score: 295.5 bits; conditional E-value: 1e-91 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfq 46 ++ igvNgq P+p++ +++gd+++++++N+l + +t++H+HGlf+ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 39 KQSIGVNGQSPIPPVYATRGDTLILNVHNSL-NVTTTIHAHGLFM 82 688****************************.99*********** PP AA1_2.hmm 47 ngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgq 91 +g ++mDG+ m tqC+ippge++tYe+++ eq Gt+W+H+H + q 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 83 RGMAYMDGPGMTTQCGIPPGESFTYEYHL-EQEGTFWLHGHDHDQ 126 *****************************.*************** PP AA1_2.hmm 92 YeDGlrgpliiedkeepyeydeeltltlsdwYheeskelvkefls 136 DGlr++l+i dke py+yd e +t dwY+e+ e + + 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 127 NADGLRTALVIYDKEPPYKYDAEHLFTFEDWYKEQFAERAALTTD 171 **********************************99987766655 PP AA1_2.hmm 137 kynptgaepipdsllv......netenatlevepgktYllriinv 175 pt p p+ + n +++ +++ep+ktY++r+in+ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 172 ---PTQPFPPPSGYGFglingyNGNTTKPIRFEPKKTYRIRLINM 213 ...55556666665556668877788888**************** PP AA1_2.hmm 176 gafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLv 220 + + + + + + +++i+evDG+ ++++vd +++a a RysvLv 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 214 SSTVWFKFRIPGLKLRIIEVDGILSDEHPVDGVQLAPAMRYSVLV 258 ********************************************* PP AA1_2.hmm 221 kakndtsknyalvakmdetmldvvpddlqlnvtstlvydksaala 265 +a+++++ ny + km + l+ p + ++ ++y+++ + + 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 259 TAHDSDEYNYYFKIKMYADFLEPSPGETPRFYSGLIEYKQESPVK 303 ********************************************* PP AA1_2.hmm 266 eastvdel..ealdDfkleplekeelleepdkeieldvemdnlkd 308 e v++ + ++D+kl++l+k + +d++++l+v + ++ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 304 EFPDVNDStlTWVEDIKLTALDK-RPPLPVDRSLRLTVGNNLMST 347 *99884433599***********.666679*************** PP AA1_2.hmm 309 gvnyaffNnitYvapkvptlltvlssge 336 g ++ +NnitY ap vp+l+t++++g+ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 348 GQHMDHINNITYYAPLVPSLFTAMTTGD 375 *************************986 PP == domain 2 score: -0.6 bits; conditional E-value: 0.12 AA1_2.hmm 16 ievnkgdrvevkltNgledentslHfHGlfqngtna 51 + ++++ +e++++N + +H HG ++ t++ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 390 VVLKHNEVIELEVHNPN-RIPHPMHLHGHAFQVTEY 424 55677888888888864.568999999998877765 PP == domain 3 score: -0.0 bits; conditional E-value: 0.079 AA1_2.hmm 62 pippgetltYeftveeqvGtYWyHsHsk 89 +ipp++ ++ +f++ ++ G + yH+H + 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 454 EIPPNSYIKVRFRA-DNPGVWLYHCHVN 480 68999999999999.9**********87 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 275.4 0.2 2.2e-85 2.2e-85 8 352 .. 38 482 .. 26 485 .. 0.81 Alignments for each domain: == domain 1 score: 275.4 bits; conditional E-value: 2.2e-85 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlr 52 ++ i vNgq P P ++a++gDt++++V+N+l + +ttiH hGl+ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 38 YKQSIGVNGQSPIPPVYATRGDTLILNVHNSL-NVTTTIHAHGLF 81 56899**************************9.789********* PP AA1.hmm 53 qlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvsl 97 ++g +++DG+ + tqc i+pg+sftYe +++ q+Gt+w H H 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 82 MRGMAYMDGPGMTTQCGIPPGESFTYEYHLE-QEGTFWLHGHDHD 125 ******************************9.************* PP AA1.hmm 98 qyadGlrGaliirdpkskekydvddeelvillsdwyhktaeell. 141 q+adGlr al+i+d+ + y++d +e+ ++++dwy+++ +e 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 126 QNADGLRTALVIYDK--EPPYKYD-AEHLFTFEDWYKEQFAERAa 167 *************76..4457766.889***********998885 PP AA1.hmm 142 .kenatgaepa...pdsllinGkgrlyncssklevlkvepgktyr 182 +++ t+ p +linG + ++ +++ep+ktyr 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 168 lTTDPTQPFPPpsgYGFGLINGYNGN-----TTKPIRFEPKKTYR 207 522223333333344778****9752.....23579********* PP AA1.hmm 183 lrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGq 227 +rlin+++ ++f i + kl +ie+Dg+ + vd +q+ap+ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 208 IRLINMSSTVWFKFRIPGLKLRIIEVDGILSDEHPVDGVQLAPAM 252 ********************************************* PP AA1.hmm 228 rydvllkanqsag.nywira.slds...a...afdnttalailrY 264 ry+vl++a++s++ ny++++ +++ + + + +++++Y 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 253 RYSVLVTAHDSDEyNYYFKIkMYADflePspgE-TPRFYSGLIEY 296 *******9999966******5555587515544.456669***** PP AA1.hmm 265 kgassas...................................... 271 k++s + 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 297 KQESPVKefpdvndstltwvedikltaldkrpplpvdrslrltvg 341 886555577888888888999999999999999999999999999 PP AA1.hmm 272 ..............nvsfvepstsllea.ysgv...........d 290 n+++ p ++ l + ++ + 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 342 nnlmstgqhmdhinNITYYAPLVPSLFTaM-TTgdlamnpevynN 385 999999988888888888888666554423.22235555554432 PP AA1.hmm 291 etka.......klkln..............hp..lhghdfvvvnf 312 + n hp lhgh f v ++ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 386 ---RthpvvlkH---NevielevhnpnripHPmhLHGHAFQVTEY 424 ...133454430...255555566899999*************76 PP AA1.hmm 313 d........aedeak..............rdtvavpkggwvvirf 335 + rd++ +p+++++ +rf 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 425 GpslatfqpG----StfsplvqslvapiqRDVMEIPPNSYIKVRF 465 6655433340....145556666777888**************** PP AA1.hmm 336 vadnpgvwllhchieaH 352 +adnpgvwl hch++ H 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 466 RADNPGVWLYHCHVNIH 482 ****************9 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 166.9 0.0 1.2e-52 1.2e-52 4 295 .. 34 324 .. 31 331 .. 0.81 2 ? -3.8 0.0 1.2 1.2 86 99 .. 467 480 .. 456 482 .. 0.73 Alignments for each domain: == domain 1 score: 166.9 bits; conditional E-value: 1.2e-52 AA1_1.hmm 4 DGfs.rsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkst 47 DG++ ++++ vng+ p p + +++gd++ +nv+n+L+ +t 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 34 DGVNyKQSIGVNGQSPIPPVYATRGDTLILNVHNSLN-----VTT 73 7765377899************************986.....689 PP AA1_1.hmm 48 sihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtf 92 +ih hglf++g +++dgp + tqC i pg+sf+y++++ +q Gtf 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 74 TIHAHGLFMRGMAYMDGPGMTTQCGIPPGESFTYEYHL-EQEGTF 117 ************************************99.899*** PP AA1_1.hmm 93 wYHshlstqycdglrGalvvydpedplkslydvddestvitladw 137 w H h + q dglr alv+yd+e p+k yd ++ ++t+ dw 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 118 WLHGHDHDQNADGLRTALVIYDKEPPYK--YD---AEHLFTFEDW 157 **************************87..54...567999**** PP AA1_1.hmm 138 yhtaakell......klvavadstlinGlgryaggpeaelavvnv 176 y ++ e + +++ + G g ++g + + ++ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 158 YKEQFAERAalttdpTQPFPP--PSGYGFGLINGYNGNTTKPIRF 200 *99876665344433222222..33467778888888888899** PP AA1_1.hmm 177 ekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvds 221 e +k Yr+rl+++s++ f+f i g +l +ie+dg+ ++ + vd 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 201 EPKKTYRIRLINMSSTVWFKFRIPGLKLRIIEVDGILSDEHPVDG 245 ********************************************* PP AA1_1.hmm 222 iqifagqrysvvleanqe.vdnYwiranpnlgk...ntgfeggin 262 +q+ + rysv+++a + nY+ + ++ + + g + 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 246 VQLAPAMRYSVLVTAHDSdEYNYYFKIKMYADFlepSPGETPRFY 290 **************9765156999876665443335666666777 PP AA1_1.hmm 263 sailrykg.apeaePttkqkastnpLkeanlhpl 295 s ++ yk +p++e + ++++ + +++ +l++l 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 291 SGLIEYKQeSPVKEFPDVNDSTLTWVEDIKLTAL 324 7777775413444544444455555555555555 PP == domain 2 score: -3.8 bits; conditional E-value: 1.2 AA1_1.hmm 86 pdqaGtfwYHshls 99 +d+ G + YH h++ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 467 ADNPGVWLYHCHVN 480 578899*****986 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 153.8 0.0 1.3e-48 1.3e-48 16 296 .. 22 300 .. 12 313 .. 0.86 2 ! 3.9 0.0 0.0057 0.0057 93 118 .. 455 480 .. 452 484 .. 0.92 Alignments for each domain: == domain 1 score: 153.8 bits; conditional E-value: 1.3e-48 AA1_3.hmm 16 ytlevtestlapDGveke.allvngqyPgptieadWGDtlevtvk 59 +++vt + + DGv+ + + vngq P p + a GDtl ++v+ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 22 VDWDVTYVYMMRDGVNYKqSIGVNGQSPIPPVYATRGDTLILNVH 66 578999999******7654999*********************** PP AA1_3.hmm 60 nnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr 104 n+l+ t+iH HG+ + +DG tqC i+pgesftYe++ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 67 NSLN-VTTTIHAHGLFMRGMAYMDGPGMTTQCGIPPGESFTYEYH 110 ***8.6799*****************99***************** PP AA1_3.hmm 105 atqyGtswYHsHyslQyadGvlGplvinGPasanydvdl.gplll 148 +q Gt w H H Q adG+ +lvi+ + +y +d+ + +++ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 111 LEQEGTFWLHGHDHDQNADGLRTALVIYDK-EPPYKYDAeHLFTF 154 ***************************965.56677776245678 PP AA1_3.hmm 149 tdwshesafelveeaeasggppvadn....iLingknkvkkskke 189 +dw++e++ e ++ ++ ++p + +Ling n +++ 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 155 EDWYKEQFAERAALTTDPTQPFPPPSgygfGLINGYNGNTT---- 195 *******9999888885555544444112257888776665.... PP AA1_3.hmm 190 eegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDf 234 + +++e++k+yr+rlin s+ +fkf i g kl++i+ D 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 196 -----KPIRFEPKKTYRIRLINMSSTVWFKFRIPGLKLRIIEVDG 235 .....6799************************************ PP AA1_3.hmm 235 vpiepyttdslligigqRydviveanqe.eenywlraelaeaCsk 278 + +d ++++ + Ry v+v+a+++ e ny+++ ++ ++ + 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 236 ILSDEHPVDGVQLAPAMRYSVLVTAHDSdEYNYYFKIKMYADFLE 280 *************************999799*****999887666 PP AA1_3.hmm 279 ln..aeekeikailrYeeas 296 + ++ + ++++Y+++s 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 281 PSpgETPRFYSGLIEYKQES 300 54346777788888888776 PP == domain 2 score: 3.9 bits; conditional E-value: 0.0057 AA1_3.hmm 93 iapgesftYefratqyGtswYHsHys 118 i+p++ ++ +fra++ G YH H 224714|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 455 IPPNSYIKVRFRADNPGVWLYHCHVN 480 8999********************75 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (549 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 104.10 // Query: 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 [L=510] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.8e-83 267.7 0.4 4.8e-83 267.0 0.0 1.5 2 AA1_2.hmm 1.8e-76 246.0 0.1 2.9e-76 245.4 0.1 1.2 1 AA1.hmm 8.6e-49 154.3 0.4 6.4e-48 151.4 0.4 2.3 2 AA1_1.hmm 2.7e-44 139.7 1.3 1.5e-43 137.2 0.2 2.1 2 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 267.0 0.0 4.8e-83 4.8e-83 2 336 .. 39 365 .. 38 366 .. 0.94 2 ? -3.0 0.1 0.64 0.64 72 89 .. 421 437 .. 411 440 .. 0.74 Alignments for each domain: == domain 1 score: 267.0 bits; conditional E-value: 4.8e-83 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfq 46 rr igvNgq P+p++ +++gd+++++++N+l + +t++H+HGlf+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 39 RRSIGVNGQSPIPPVYATRGDTLILNVHNSL-NVTTTIHAHGLFM 82 899****************************.99*********** PP AA1_2.hmm 47 ngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgq 91 +g ++mDG++m qC+ippge++tYe+++ eq+Gt+W+H+H + + 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 83 RGMSYMDGPAMTNQCGIPPGESFTYEYHL-EQAGTFWIHGHDHDH 126 *****************************.*************** PP AA1_2.hmm 92 YeDGlrgpliiedkeepyeydeeltltlsdwYheeskelvkefls 136 DGlr++++i dke py+yd e +t dw+ + +e + + s 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 127 SADGLRTAFVIYDKEPPYKYDAEHLFTFEDWFVGKFTERAELVSS 171 ********************************9999888777655 PP AA1_2.hmm 137 kynptgaepipdsllv......netenatlevepgktYllriinv 175 pt p p+++ + n +++ +++ep+ktY++r+in+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 172 ---PTMPYPPPHTVGFglingyNGNTTKPIKFEPKKTYRIRLINM 213 ...66668888887777778888888889**************** PP AA1_2.hmm 176 gafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLv 220 + y+++ +h+++++e DGv+ +a a RysvLv 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 214 SSTYWYYFQIPGHKLRVIEFDGVQ----------LAPAMRYSVLV 248 **********************86..........66799****** PP AA1_2.hmm 221 kakndtsknyalvakmdetmldvvpddlqlnvtstlvydksaala 265 +a+++++ ny km + + + p + ++ ++y+++ + + 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 249 TAHDSDELNYYYKVKMYADFIPTSPGENPRFYSGLVEYKQDSPVK 293 ********************************************* PP AA1_2.hmm 266 eastvdel..ealdDfkleplekeelleepdkeieldvemdnlkd 308 e +d+ ++D+k+++l+k + +d+++ l + + l+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 294 ELPDIDDSklIWVEDIKMTALDK-QPPLPVDRSLYLWLGNNLLST 337 ***9977633679**********.666679*************** PP AA1_2.hmm 309 gvnyaffNnitYvapkvptlltvlssge 336 g + +NnitY ap vp+l+t++++g+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 338 GQRLDHINNITYYAPLVPSLFTAMTTGD 365 *************************986 PP == domain 2 score: -3.0 bits; conditional E-value: 0.64 AA1_2.hmm 72 eftveeqvGtYWyHsHsk 89 +f++ ++ G + yH+H + 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 421 RFRA-DNPGVWLYHCHVN 437 5566.899********86 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 245.4 0.1 2.9e-76 2.9e-76 8 352 .. 38 439 .. 26 442 .. 0.78 Alignments for each domain: == domain 1 score: 245.4 bits; conditional E-value: 2.9e-76 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlr 52 r+ i vNgq P P ++a++gDt++++V+N+l + +ttiH hGl+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 38 YRRSIGVNGQSPIPPVYATRGDTLILNVHNSL-NVTTTIHAHGLF 81 57899**************************9.789********* PP AA1.hmm 53 qlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvsl 97 ++g ++DG+a+ +qc i+pg+sftYe +++ qaGt+w H H 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 82 MRGMSYMDGPAMTNQCGIPPGESFTYEYHLE-QAGTFWIHGHDHD 125 ******************************9.************* PP AA1.hmm 98 qyadGlrGaliirdpkskekydvddeelvillsdwyhktaeell. 141 + adGlr a++i+d+ + y++d +e+ ++++dw+ + +e 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 126 HSADGLRTAFVIYDK--EPPYKYD-AEHLFTFEDWFVGKFTERAe 167 *************76..4457766.889********998777665 PP AA1.hmm 142 ..kenatgaepa..pdsllinGkgrlyncssklevlkvepgktyr 182 ++ + +p +linG + ++ +k+ep+ktyr 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 168 lvSSPTMPYPPPhtVGFGLINGYNGN-----TTKPIKFEPKKTYR 207 543332222222457889****9762.....23579********* PP AA1.hmm 183 lrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGq 227 +rlin+++ ++f+i +Hkl vie Dgv+ +ap+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 208 IRLINMSSTYWYYFQIPGHKLRVIEFDGVQ----------LAPAM 242 ***************************975..........67779 PP AA1.hmm 228 rydvllkanqsag.nywira.slds...a...afdnttalailrY 264 ry+vl++a++s++ ny+ ++ +++ + + + + +++++Y 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 243 RYSVLVTAHDSDElNYYYKVkMYADfipTspgE-NPRFYSGLVEY 286 *******9999977******5555587624533.677789***** PP AA1.hmm 265 kgassas...................................... 271 k++s + 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 287 KQDSPVKelpdiddskliwvedikmtaldkqpplpvdrslylwlg 331 986655577778888888888888888888888888888888888 PP AA1.hmm 272 ..............nvsfvepstsllea.ysgvdetkaklkln.. 299 n+++ p ++ l +++ +l +n 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 332 nnllstgqrldhinNITYYAPLVPSLFTaMTTG-----DLAMNpd 371 888888888888877778777665544412211.....2222233 PP AA1.hmm 300 ......hp..lhghdfvvv..nfd...aedeak....rdtvavpk 327 hp l ++++ + d + + + rd++++p+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 372 vynnrtHPvvLKHNEVTEYgpSLDgftSGN--TfsplRDVIQIPS 414 333455775444444443344222432333..14578******** PP AA1.hmm 328 ggwvvirfvadnpgvwllhchieaH 352 ++v irf+adnpgvwl hch+++H 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 415 FSYVKIRFRADNPGVWLYHCHVNVH 439 ************************9 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 151.4 0.4 6.4e-48 6.4e-48 4 245 .. 34 260 .. 31 319 .. 0.82 2 ? -2.1 0.0 0.36 0.36 78 100 .. 414 438 .. 404 448 .. 0.76 Alignments for each domain: == domain 1 score: 151.4 bits; conditional E-value: 6.4e-48 AA1_1.hmm 4 DGfs.rsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkst 47 DG++ r+++ vng+ p p + +++gd++ +nv+n+L+ +t 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 34 DGINyRRSIGVNGQSPIPPVYATRGDTLILNVHNSLN-----VTT 73 7765489999************************986.....689 PP AA1_1.hmm 48 sihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtf 92 +ih hglf++g +++dgpa+ +qC i pg+sf+y++++ +qaGtf 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 74 TIHAHGLFMRGMSYMDGPAMTNQCGIPPGESFTYEYHL-EQAGTF 117 ************************************99.9***** PP AA1_1.hmm 93 wYHshlstqycdglrGalvvydpedplkslydvddestvitladw 137 w H h + dglr a+v+yd+e p+k yd ++ ++t+ dw 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 118 WIHGHDHDHSADGLRTAFVIYDKEPPYK--YD---AEHLFTFEDW 157 **************************87..54...557999**** PP AA1_1.hmm 138 yhtaakell.....klvavadstlinGlgryaggpeaelavvnve 177 + + +e + ++ + G g ++g + + ++ e 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 158 FVGKFTERAelvssP-TMPYPPPHTVGFGLINGYNGNTTKPIKFE 201 *87766665344321.2222345677999999999999999**** PP AA1_1.hmm 178 kgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsi 222 +k Yr+rl+++s++ + f+i gh+l vie dgv+ p 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 202 PKKTYRIRLINMSSTYWYYFQIPGHKLRVIEFDGVQLAPA----- 241 **********************************988875..... PP AA1_1.hmm 223 qifagqrysvvleanqevd.nYwi 245 rysv+++a + + nY+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 242 -----MRYSVLVTAHDSDElNYYY 260 .....5666666665443335555 PP == domain 2 score: -2.1 bits; conditional E-value: 0.36 AA1_1.hmm 78 sfly.dfkv.pdqaGtfwYHshlst 100 sf y +++ +d+ G + YH h+++ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 414 SFSYvKIRFrADNPGVWLYHCHVNV 438 56553333336889********875 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 137.2 0.2 1.5e-43 1.5e-43 14 296 .. 20 290 .. 12 301 .. 0.83 2 ? 0.7 0.1 0.052 0.052 97 118 .. 416 437 .. 410 441 .. 0.81 Alignments for each domain: == domain 1 score: 137.2 bits; conditional E-value: 1.5e-43 AA1_3.hmm 14 reytlevtestlapDGveke.allvngqyPgptieadWGDtlevt 57 + +++vt + + DG++ + + vngq P p + a GDtl ++ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 20 VVVDWDVTYVYMMRDGINYRrSIGVNGQSPIPPVYATRGDTLILN 64 55688999999******7665999********************* PP AA1_3.hmm 58 vknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYe 102 v+n+l+ t+iH HG+ + + +DG + qC i+pgesftYe 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 65 VHNSLN-VTTTIHAHGLFMRGMSYMDGPAMTNQCGIPPGESFTYE 108 *****8.6799********************************** PP AA1_3.hmm 103 fratqyGtswYHsHyslQyadGvlGplvinGPasanydvdl.gpl 146 ++ +q Gt w H H adG+ + vi+ + +y +d+ + + 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 109 YHLEQAGTFWIHGHDHDHSADGLRTAFVIYDK-EPPYKYDAeHLF 152 *****************************965.566777762456 PP AA1_3.hmm 147 lltdwshesafelveeae....asggppvadniLingknkvkksk 187 +++dw+ +++e +e + p ++ +Ling n +++ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 153 TFEDWFVGKFTERAELVSsptmPYPPPHTVGFGLINGYNGNTT-- 195 78*****999999988884422222334455678888877666.. PP AA1_3.hmm 188 keeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaa 232 + +k+e++k+yr+rlin s+ ++ f+i gHkl+vi+ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 196 -------KPIKFEPKKTYRIRLINMSSTYWYYFQIPGHKLRVIEF 233 .......6799********************************** PP AA1_3.hmm 233 DfvpiepyttdslligigqRydviveanqe.eenywlraelaea. 275 D v + p + Ry v+v+a+++ e ny+ ++++ ++ 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 234 DGVQLAP----------AMRYSVLVTAHDSdELNYYYKVKMYADf 268 9988777..........5699999999888677898888887763 PP AA1_3.hmm 276 .CsklnaeekeikailrYeeas 296 ++ ++ + ++++Y+++s 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 269 iPTSPGENPRFYSGLVEYKQDS 290 2233346777778888887765 PP == domain 2 score: 0.7 bits; conditional E-value: 0.052 AA1_3.hmm 97 esftYefratqyGtswYHsHys 118 + ++ +fra++ G YH H 272564|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1_2|AA1_2 416 SYVKIRFRADNPGVWLYHCHVN 437 556679**************76 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (510 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.01s 00:00:00.02 Elapsed: 00:00:00.00 # Mc/sec: 77.17 // Query: 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 [L=553] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.1e-87 279.8 0.1 6.1e-87 279.8 0.1 2.2 2 AA1_2.hmm 3.6e-84 271.4 1.1 4.6e-84 271.0 1.1 1.0 1 AA1.hmm 1.6e-53 169.8 0.3 5.9e-53 168.0 0.2 1.9 2 AA1_1.hmm 1.4e-47 150.4 1.0 9.1e-47 147.8 0.2 2.1 2 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 279.8 0.1 6.1e-87 6.1e-87 2 336 .. 39 375 .. 38 376 .. 0.94 2 ? -1.3 2.8 0.2 0.2 17 54 .. 391 430 .. 383 484 .. 0.64 Alignments for each domain: == domain 1 score: 279.8 bits; conditional E-value: 6.1e-87 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 r+ ig+Ngq P+p++ +++gd+++++++N l + +t++H+HGlf++g ++mDG 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 39 RQSIGINGQSPIPPVYATRGDTLILNVHNLL-NVTTTIHAHGLFMRGMSYMDG 90 899****************************.99******************* PP AA1_2.hmm 55 asmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkee 107 ++m qC+ippge +tYe+++ eq+Gt+W+H+H + + DGlr++l+i dke 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 91 PAMTNQCGIPPGELFTYEYHL-EQAGTFWIHGHDHDHSADGLRTALVIYDKEP 142 *********************.******************************* PP AA1_2.hmm 108 pyeydeeltltlsdwYheeskelvkeflskynptgaepipdsllv......ne 154 py+yd e +t dw+ + +e + + s pt p p+++ + n 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 143 PYKYDAEHLFTFEDWFVGQFTERAELVSS---PTMPYPPPHTVGFglingyNG 192 *****************999998877755...666678888877777788888 PP AA1_2.hmm 155 tenatlevepgktYllriinvgafasqylvledhemtivevDGvdvepsevds 207 +++ +++ep+ktY++r+in++ y+++ +h+++++evDG+ +++ vd 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 193 NTTKPIKFEPKKTYRIRLINMSSTYWYYFQIPGHKLRVIEVDGILSDEHIVDG 245 88889************************************************ PP AA1_2.hmm 208 lyiavaQRysvLvkakndtsknyalvakmdetmldvvpddlqlnvtstlvydk 260 +++a a RysvLv+a+++++ ny km + + + + ++ ++y++ 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 246 VQLAPAMRYSVLVTAHKSDELNYYYKVKMYADFIPTSLGENPRFYSGLVEYKQ 298 *******************************99999999999999******** PP AA1_2.hmm 261 saalaeastvdel..ealdDfkleplekeelleepdkeieldvemdnlkdgvn 311 + + +e vd+ + ++D+k+++l+k + +d+++ l + + l+ g + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 299 DSPVKELPDVDDNklTWVEDIKMTALDK-QPPLPVDRSLYLWLGNNLLSTGQR 350 ********995543499***********.666679****************** PP AA1_2.hmm 312 yaffNnitYvapkvptlltvlssge 336 +NnitY ap vp+l+t++++g+ 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 351 LDHINNITYYAPLVPSLFTAMTTGD 375 **********************986 PP == domain 2 score: -1.3 bits; conditional E-value: 0.2 AA1_2.hmm 17 evnkgdrvevkltNgledentslHfHGlfqngt...namDG 54 ++++ ve++++N + +H HG ++ t + DG 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 391 VLKHNEVVELEVHNPN-RFHHPMHLHGHAFQVTeygPSLDG 430 4566677777777653.346678888877776633444555 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 271.0 1.1 4.6e-84 4.6e-84 8 352 .. 38 482 .. 26 485 .. 0.82 Alignments for each domain: == domain 1 score: 271.0 bits; conditional E-value: 4.6e-84 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaD 60 r+ i +Ngq P P ++a++gDt++++V+N l + +ttiH hGl+++g ++D 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 38 YRQSIGINGQSPIPPVYATRGDTLILNVHNLL-NVTTTIHAHGLFMRGMSYMD 89 6899***************************9.889***************** PP AA1.hmm 61 GvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpk 113 G+a+ +qc i+pg+ ftYe +++ qaGt+w H H + adGlr al+i+d+ 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 90 GPAMTNQCGIPPGELFTYEYHLE-QAGTFWIHGHDHDHSADGLRTALVIYDK- 140 **********************9.**************************76. PP AA1.hmm 114 skekydvddeelvillsdwyhktaeell...kenatgaepa..pdsllinGkg 161 + y++d +e+ ++++dw+ + +e ++ + +p +linG + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 141 -EPPYKYD-AEHLFTFEDWFVGQFTERAelvSSPTMPYPPPhtVGFGLINGYN 191 .4457766.889********999777775543332222222457889****97 PP AA1.hmm 162 rlyncssklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk 214 ++ +k+ep+ktyr+rlin+++ ++f+i +Hkl vie+Dg+ + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 192 GN-----TTKPIKFEPKKTYRIRLINMSSTYWYYFQIPGHKLRVIEVDGILSD 239 62.....23579***************************************** PP AA1.hmm 215 pyevdslqiapGqrydvllkanqsag.nywira.slds...a...afdnttal 259 vd +q+ap+ ry+vl++a++s++ ny+ ++ +++ + + + + + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 240 EHIVDGVQLAPAMRYSVLVTAHKSDElNYYYKVkMYADfipTslgE-NPRFYS 291 ********************9999978******5555587524532.677789 PP AA1.hmm 260 ailrYkgassas......................................... 271 ++++Yk++s + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 292 GLVEYKQDSPVKelpdvddnkltwvedikmtaldkqpplpvdrslylwlgnnl 344 *****986655578888888889999999999999999999999999999999 PP AA1.hmm 272 ...........nvsfvepstsllea.ysgv...........detka....... 294 n+++ p ++ l ++ + + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 345 lstgqrldhinNITYYAPLVPSLFTaMT-TgdlaknpevynN---Rthpvvlk 393 9999999999999998886665554232.2234444554432...13445444 PP AA1.hmm 295 klkln..............hp..lhghdfvvvnfd.......aedeak..... 319 + n hp lhgh f v ++ + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 394 H---NevvelevhnpnrfhHPmhLHGHAFQVTEYGpsldgftS----Gntfsp 439 0...244455566788888*************66665545442....023446 PP AA1.hmm 320 ..........rdtvavpkggwvvirfvadnpgvwllhchieaH 352 rd++ +p+ ++v irf+adnpgvwl hch+++H 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 440 lvqslvapiqRDVIEIPSFSYVKIRFRADNPGVWLYHCHVNVH 482 6777778888********************************9 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 168.0 0.2 5.9e-53 5.9e-53 4 269 .. 34 297 .. 31 331 .. 0.82 2 ? -2.3 0.0 0.43 0.43 78 100 .. 457 481 .. 449 489 .. 0.75 Alignments for each domain: == domain 1 score: 168.0 bits; conditional E-value: 5.9e-53 AA1_1.hmm 4 DGfs.rsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglf 55 DG++ r+++ +ng+ p p + +++gd++ +nv+n L+ +t+ih hglf 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 34 DGINyRQSIGINGQSPIPPVYATRGDTLILNVHNLLN-----VTTTIHAHGLF 81 78654999*************************9986.....679******** PP AA1_1.hmm 56 qkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglrG 108 ++g +++dgpa+ +qC i pg+ f+y++++ +qaGtfw H h + dglr 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 82 MRGMSYMDGPAMTNQCGIPPGELFTYEYHL-EQAGTFWIHGHDHDHSADGLRT 133 ****************************99.9********************* PP AA1_1.hmm 109 alvvydpedplkslydvddestvitladwyhtaakell.....klvavadstl 156 alv+yd+e p+k yd ++ ++t+ dw+ + +e + ++ + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 134 ALVIYDKEPPYK--YD---AEHLFTFEDWFVGQFTERAelvssP-TMPYPPPH 180 **********87..54...557899****987766665344321.22223456 PP AA1_1.hmm 157 inGlgryaggpeaelavvnvekgkrYrfrlvsiscdpnftfsidghnltviea 209 G g ++g + + ++ e +k Yr+rl+++s++ + f+i gh+l vie+ 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 181 TVGFGLINGYNGNTTKPIKFEPKKTYRIRLINMSSTYWYYFQIPGHKLRVIEV 233 77999999999999999************************************ PP AA1_1.hmm 210 dgvntkpltvdsiqifagqrysvvleanqevd.nYwiranpnlgk...ntgfe 258 dg+ ++ + vd +q+ + rysv+++a ++ + nY+ + ++ + + g + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 234 DGILSDEHIVDGVQLAPAMRYSVLVTAHKSDElNYYYKVKMYADFiptSLGEN 286 ***************************99766699887766554433455666 PP AA1_1.hmm 259 gginsailryk 269 s ++ yk 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 287 PRFYSGLVEYK 297 66666677665 PP == domain 2 score: -2.3 bits; conditional E-value: 0.43 AA1_1.hmm 78 sfly.dfkv.pdqaGtfwYHshlst 100 sf y +++ +d+ G + YH h+++ 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 457 SFSYvKIRFrADNPGVWLYHCHVNV 481 55553333336889********875 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 147.8 0.2 9.1e-47 9.1e-47 14 297 .. 20 301 .. 12 313 .. 0.86 2 ? 0.6 0.0 0.056 0.056 97 118 .. 459 480 .. 452 484 .. 0.82 Alignments for each domain: == domain 1 score: 147.8 bits; conditional E-value: 9.1e-47 AA1_3.hmm 14 reytlevtestlapDGveke.allvngqyPgptieadWGDtlevtvknnlkkn 65 + +++vt + + DG++ + + +ngq P p + a GDtl ++v+n l+ 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 20 VVVDWDVTYVYMMRDGINYRqSIGINGQSPIPPVYATRGDTLILNVHNLLN-V 71 55688999999******6544999************************886.7 PP AA1_3.hmm 66 GtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefratqyGtswYHsHys 118 t+iH HG+ + + +DG + qC i+pge ftYe++ +q Gt w H H 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 72 TTTIHAHGLFMRGMSYMDGPAMTNQCGIPPGELFTYEYHLEQAGTFWIHGHDH 124 899************************************************** PP AA1_3.hmm 119 lQyadGvlGplvinGPasanydvdl.gpllltdwshesafelveeae....as 166 adG+ +lvi+ + +y +d+ + ++++dw+ +++e +e + 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 125 DHSADGLRTALVIYDK-EPPYKYDAeHLFTFEDWFVGQFTERAELVSsptmPY 176 *************965.56677776245678*****99999998888442222 PP AA1_3.hmm 167 ggppvadniLingknkvkkskkeeegeysevklekgkkyrlrlintsvdstfk 219 p ++ +Ling n +++ + +k+e++k+yr+rlin s+ ++ 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 177 PPPHTVGFGLINGYNGNTT---------KPIKFEPKKTYRIRLINMSSTYWYY 220 2334455678888877666.........6799********************* PP AA1_3.hmm 220 fsidgHkltviaaDfvpiepyttdslligigqRydviveanqe.eenywlrae 271 f+i gHkl+vi+ D + +d ++++ + Ry v+v+a+++ e ny+ +++ 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 221 FQIPGHKLRVIEVDGILSDEHIVDGVQLAPAMRYSVLVTAHKSdELNYYYKVK 273 *****************************************99788***9999 PP AA1_3.hmm 272 laea..CsklnaeekeikailrYeeass 297 + ++ ++l ++ + ++++Y+++s 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 274 MYADfiPTSLGENPRFYSGLVEYKQDSP 301 9887434444588888999999988764 PP == domain 2 score: 0.6 bits; conditional E-value: 0.056 AA1_3.hmm 97 esftYefratqyGtswYHsHys 118 + ++ +fra++ G YH H 264176|Linpe1_GeneCatalog_proteins_20150915.aa.fasta|AA1 459 SYVKIRFRADNPGVWLYHCHVN 480 556679**************76 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (553 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 79.17 // Query: 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 [L=554] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.6e-88 283.5 2.5 9.5e-88 283.1 2.5 1.0 1 AA1.hmm 6.1e-82 263.3 0.4 1e-81 262.6 0.4 1.3 1 AA1_2.hmm 6.4e-53 167.8 0.0 1.1e-52 167.0 0.0 1.3 1 AA1_1.hmm 2.7e-50 159.3 0.5 6.3e-50 158.1 0.5 1.5 1 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 283.1 2.5 9.5e-88 9.5e-88 7 356 .. 40 497 .. 33 499 .. 0.83 Alignments for each domain: == domain 1 score: 283.1 bits; conditional E-value: 9.5e-88 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhG 50 r++i vNg++P P i++ + Dt+++tV+N+l + t+iH hG 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 40 KVRRAIGVNGKLPIPPIHLAKHDTLILTVKNSL-NVHTSIHAHG 82 56899***************************9.789******* PP AA1.hmm 51 lrqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsH 94 l+q+gtn+ DG+ +vtqc ++++++ftY+ + +q+Gtyw H+H 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 83 LFQNGTNYLDGPDQVTQCGLPSNHTFTYTYKNISQSGTYWLHAH 126 *******************************999********** PP AA1.hmm 95 vslqyadGlrGaliirdpkske.kydvddeelvillsdwyhkta 137 + q+adG r +l+i dp ++ ky+ e v+ ++dwy + 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 127 SLHQNADGARTPLVISDP--EDvKYP----EYVLWFEDWYPVEF 164 ****************99..332466....99*********998 PP AA1.hmm 138 eellkenatgaepa.....pdsllinGkgrlyncssklevlkve 176 + +++++ ++p+ ++l+nG++ +++ +vlk+e 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 165 AVRMEQTMDPNQPFpppvtYPNMLLNGHNP----QENRTVLKFE 204 888855555555554445569*******87....35668***** PP AA1.hmm 177 pgktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevds 220 gktyr+rlin+++ + ++f+i + kl+vie+Dg +++ + vd 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 205 VGKTYRIRLINMSTTEWFKFNIPGYKLQVIETDGAPTTLTAVDG 248 ******************************************** PP AA1.hmm 221 lqiapGqrydvllkanqsa.gnywiraslds.aafdnttalail 262 ++++pGqry+vl++a+++ ++++++ + s ++ ++ l 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 249 VDMGPGQRYSVLVTAQDRLaSTFTVALHA-SfIPL--DPLKNPL 289 **************999884577777733.23222..3334677 PP AA1.hmm 263 rYkgassas................................... 271 Y+g+ +++ 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 290 VYNGTIEHTasepapidtnnlvwtddiyingrnvnllpvdrqik 333 887743333445677999999999999999************** PP AA1.hmm 272 ..................nvsfvepstslleay.sgv....... 289 n+++++p++++l ++ s 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 334 ltlngslftdhitrdiinNITYTLPKVPTLYSAlS-Lgdlatnt 376 ***************************99988532.23444333 PP AA1.hmm 290 detka...........klkln..............hp..lhghd 306 + + hp lhgh+ 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 377 S---LygpqthsivlnH---LeniellvynpntipHPmhLHGHR 414 0...2444444344441...144455566788889********* PP AA1.hmm 307 fvvvnfd..........aedeak..................... 319 f vv++ + 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 415 FQVVEYGpippwmmqeaI----Aaslsfaehklppklvhpavvt 454 ****77777777643330....1356666777888899999999 PP AA1.hmm 320 ......rdtvavpkggwvvirfvadnpgvwllhchieaHlsmG 356 rdtv++p+ +v irf ad pgvwl+hch+++H +mG 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 455 nlqpneRDTVVLPSLEYVKIRFCADSPGVWLFHCHLDVHHAMG 497 999999***********************************99 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 262.6 0.4 1e-81 1e-81 2 336 .. 42 371 .. 41 372 .. 0.92 Alignments for each domain: == domain 1 score: 262.6 bits; conditional E-value: 1e-81 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlf 45 rr+igvNg+ P+p+i+ k d+++++++N+l + +ts+H+HGlf 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 42 RRAIGVNGKLPIPPIHLAKHDTLILTVKNSL-NVHTSIHAHGLF 84 899****************************.99********** PP AA1_2.hmm 46 qngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHsk 89 qngtn+ DG+ +vtqC++p ++t+tY+++ +q+GtYW+H+Hs 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 85 QNGTNYLDGPDQVTQCGLPSNHTFTYTYKNISQSGTYWLHAHSL 128 *****************************99************* PP AA1_2.hmm 90 gqYeDGlrgpliiedkeepyeydeeltltlsdwYheeskelvke 133 q DG r+pl+i+d+e+ ++y e++l dwY e +++ 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 129 HQNADGARTPLVISDPED-VKYP-EYVLWFEDWYPVEFAVRMEQ 170 ***************995.5775.799***************** PP AA1_2.hmm 134 flskynptgaepipdsllv....netenatlevepgktYllrii 173 + +++p + ++l+ +++++ l++e gktY++r+i 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 171 TMDPNQPFPPPVTYPNMLLnghnPQENRTVLKFEVGKTYRIRLI 214 ******9777777778888666434566779************* PP AA1_2.hmm 174 nvgafasqylvledhemtivevDGvdvepsevdslyiavaQRys 217 n+++ + + + +++++++e DG ++ + vd + + +QRys 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 215 NMSTTEWFKFNIPGYKLQVIETDGAPTTLTAVDGVDMGPGQRYS 258 ******************************************** PP AA1_2.hmm 218 vLvkakndtsknyalvakmdetmldvvpddlqlnvtstlvydks 261 vLv+a+++ + +++ + ld +++ l +n t ++ 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 259 VLVTAQDRLASTFTVALHASFIPLDPLKNPLVYNGTIE----HT 298 *************9999998888998888888888764....55 PP AA1_2.hmm 262 aalaeastvdelealdDfkleplekeelleepdkeieldvemdn 305 a+++++ +++l +dD++++ + l +d++i+l+++ + 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 299 ASEPAPIDTNNLVWTDDIYINGRNV--NLLPVDRQIKLTLNGSL 340 55666667788999*******9988..77789************ PP AA1_2.hmm 306 lkdgvnyaffNnitYvapkvptlltvlssge 336 ++d +++ ++NnitY+ pkvptl+++ls g+ 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 341 FTDHITRDIINNITYTLPKVPTLYSALSLGD 371 ***************************9986 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 167.0 0.0 1.1e-52 1.1e-52 7 241 .. 41 268 .. 34 284 .. 0.87 Alignments for each domain: == domain 1 score: 167.0 bits; conditional E-value: 1.1e-52 AA1_1.hmm 7 srsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsih 50 r+a+ vng+ p p i+ k d++ ++v+n+L+ tsih 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 41 VRRAIGVNGKLPIPPIHLAKHDTLILTVKNSLN-----VHTSIH 79 5999**************************997.....579*** PP AA1_1.hmm 51 whglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwY 94 hglfq+gtn+ dgp vtqC + ++++f+y++k +q+Gt+w 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 80 AHGLFQNGTNYLDGPDQVTQCGLPSNHTFTYTYKNISQSGTYWL 123 ******************************************** PP AA1_1.hmm 95 HshlstqycdglrGalvvydpedplkslydvddestvitladwy 138 H+h q dg r +lv+ dped + y v+ + dwy 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 124 HAHSLHQNADGARTPLVISDPEDVKYPEY-------VLWFEDWY 160 ********************998766666.......9******* PP AA1_1.hmm 139 htaakell..........klvavadstlinGlgryaggpeaela 172 ++ + +++ l+nG ++p+ + + 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 161 PVEFAVRMeqtmdpnqpfPPPVTYPNMLLNG-----HNPQENRT 199 8775544435556433222223333444444.....589999** PP AA1_1.hmm 173 vvnvekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkp 216 v++ e gk Yr+rl+++s+++ f+f i g +l+vie+dg t+ 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 200 VLKFEVGKTYRIRLINMSTTEWFKFNIPGYKLQVIETDGAPTTL 243 ******************************************** PP AA1_1.hmm 217 ltvdsiqifagqrysvvleanqevd 241 + vd +++ gqrysv+++a+ + + 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 244 TAVDGVDMGPGQRYSVLVTAQDRLA 268 ********************98766 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 158.1 0.5 6.3e-50 6.3e-50 13 266 .. 22 271 .. 15 280 .. 0.89 Alignments for each domain: == domain 1 score: 158.1 bits; conditional E-value: 6.3e-50 AA1_3.hmm 13 treytlevtestlapDGveke.allvngqyPgptieadWGDtle 55 t++ ++++ + ++ D ++ + a+ vng++P p i+ Dtl 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 22 TVRVNWDIGYVFVNRDNTKVRrAIGVNGKLPIPPIHLAKHDTLI 65 566788888899999999766599******************** PP AA1_3.hmm 56 vtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesf 99 +tvkn+l+ tsiH HG+ q+ tn DG vtqC ++ +++f 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 66 LTVKNSLN-VHTSIHAHGLFQNGTNYLDGPDQVTQCGLPSNHTF 108 *******8.569******************************** PP AA1_3.hmm 100 tYefr.atqyGtswYHsHyslQyadGvlGplvinGPasanydvd 142 tY+++ ++q Gt w H+H Q adG plvi P+ +y + 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 109 TYTYKnISQSGTYWLHAHSLHQNADGARTPLVISDPEDVKYPEY 152 ****74689********************************775 PP AA1_3.hmm 143 lgpllltdwshesafelveeae....asggppvadniLingknk 182 +l ++dw+ ++ +e+++ p++ n+L+ng+n 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 153 --VLWFEDWYPVEFAVRMEQTMdpnqPFPPPVTYPNMLLNGHNP 194 ..7999****9998888887775532333446788******998 PP AA1_3.hmm 183 vkkskkeeegeysevklekgkkyrlrlintsvdstfkfsidgHk 226 ++ ++ +k+e gk+yr+rlin s+ ++fkf i g k 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 195 QEN--------RTVLKFEVGKTYRIRLINMSTTEWFKFNIPGYK 230 776........78899**************************** PP AA1_3.hmm 227 ltviaaDfvpiepyttdslligigqRydviveanqe.eeny 266 l+vi++D p + +d + +g gqRy v+v+a+++ ++++ 230282|Coespi1_GeneCatalog_proteins_20170411.aa.fasta|AA1_2|AA1_2 231 LQVIETDGAPTTLTAVDGVDMGPGQRYSVLVTAQDRlASTF 271 *********************************99855444 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (554 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 114.49 // Query: 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 [L=472] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-78 251.9 0.0 3.5e-78 251.7 0.0 1.0 1 AA1.hmm 8.5e-75 239.9 0.0 1e-72 233.0 0.0 2.7 3 AA1_2.hmm 9.7e-44 137.8 0.0 3.3e-42 132.8 0.0 2.1 2 AA1_3.hmm 6.4e-43 135.0 0.0 1.4e-42 133.9 0.0 1.5 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 251.7 0.0 3.5e-78 3.5e-78 59 358 .] 1 416 [. 1 416 [. 0.81 Alignments for each domain: == domain 1 score: 251.7 bits; conditional E-value: 3.5e-78 AA1.hmm 59 aDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlr 104 +DG+a+vtqc i+pgksftYe +v+ qaGt+w H H+ q+adGlr 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 1 MDGAAMVTQCGIPPGKSFTYEYEVN-QAGTFWLHGHYHHQNADGLR 45 8***********************9.******************** PP AA1.hmm 105 Galiirdpkskekydvddeelvillsdwyhktaeell.....kena 145 +li++d +++ y++d e v+ ++dwy+++ +e l + + 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 46 TPLIVHDR-KQHLYKYD-GEYVFAFEDWYKESFAERLaltidP--K 87 ******75.45568877.899***********99999676432..3 PP AA1.hmm 146 tgaepa..pdsllinGkgrlyncssklevlkvepgktyrlrlinaa 189 ++ +p+ + ++linG ++++ ++++p++tyr+rlin++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 88 KSFPPEspAPNALINGVDG-----NATKPISFKPKRTYRIRLINMS 128 33344466899******44.....233579**************** PP AA1.hmm 190 lnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllka 235 + ++f++ +H++ vieaDg+y p+evd ++++pGqr++vl++a 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 129 AAVWFKFALPGHQMRVIEADGKYSVPLEVDGVTLGPGQRFSVLVSA 174 *********************************************8 PP AA1.hmm 236 nqsag.nywira.slds...a...afdnttalailrYkgassas.. 271 +sa+ ny + ++s + + + ++i++Y+++ s + 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 175 LDSASiNYQYLVeVFASffpRipgE-SPKYYTGIVEYNKDASLDiv 219 8888445555554477677614533.678889*****997666688 PP AA1.hmm 272 .............................................. 271 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 220 dtisileaipedksfsgytdvelssadrqpafpvdrsidlvlggaf 265 88888888889999999999999999999***************** PP AA1.hmm 272 ...........nvsfvepstslleay.sgv..............de 291 n++++ep++++l ++ s + 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 266 fknniprdivnNITYAEPHIPTLYSAlS-LgslavdkdlygiqsN- 309 ******************9999988531.2345555555654330. PP AA1.hmm 292 tka....klkln..............hp..lhghdfvvvnfd.... 313 + + n hp lhgh f ++++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 310 --TivlkH---NesielvvynpiripHPmhLHGHVFQLIEYGpvdp 350 ..143330...244444466677777*************7775555 PP AA1.hmm 314 ....aedeak.....................rdtvavpkggwvvir 334 + + rdtv++p+ +v +r 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 351 rmvlS----EnregfsnqtapivraseypmeRDTVVIPTMQYVKLR 392 55542....0233466677788888999999*************** PP AA1.hmm 335 fvadnpgvwllhchieaHlsmGla 358 f+adnpgvwl+hch++ H+ mG+a 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 393 FRADNPGVWLFHCHMDIHFGMGMA 416 ***********************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 233.0 0.0 1e-72 1e-72 52 335 .. 1 295 [. 1 297 [. 0.92 2 ? -0.4 0.2 0.11 0.11 15 47 .. 310 341 .. 306 348 .. 0.85 3 ! 2.9 0.0 0.0099 0.0099 65 101 .. 385 420 .. 380 430 .. 0.81 Alignments for each domain: == domain 1 score: 233.0 bits; conditional E-value: 1e-72 AA1_2.hmm 52 mDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlr 97 mDGa+mvtqC+ippg+++tYe++v +q+Gt+W+H+H++ q DGlr 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 1 MDGAAMVTQCGIPPGKSFTYEYEV-NQAGTFWLHGHYHHQNADGLR 45 9***********************.********************* PP AA1_2.hmm 98 gpliiedke.epyeydeeltltlsdwYheeskelvkeflskynp.t 141 +pli++d++ + y+yd e++++ dwY+e+ e ++ + ++++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 46 TPLIVHDRKqHLYKYDGEYVFAFEDWYKESFAERLALTIDPKKSfP 91 *******985678******************999998777766515 PP AA1_2.hmm 142 gaepipdsllvnetenat..levepgktYllriinvgafasqylvl 185 + p p++l+ + nat ++++p++tY++r+in++a + + ++l 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 92 PESPAPNALINGVDGNATkpISFKPKRTYRIRLINMSAAVWFKFAL 137 6779999988766555543499************************ PP AA1_2.hmm 186 edhemtivevDGvdvepsevdslyiavaQRysvLvkakndtsknya 231 +h+m+++e+DG + p evd +++ +QR+svLv+a +++s ny+ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 138 PGHQMRVIEADGKYSVPLEVDGVTLGPGQRFSVLVSALDSASINYQ 183 ********************************************** PP AA1_2.hmm 232 lvakmdetmldvvpddlqlnvtstlvydksaalaeastv....... 270 + ++ + + +p + ++t ++y+k+a+l+ t+ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 184 YLVEVFASFFPRIPGESPKYYTGIVEYNKDASLDIVDTIsileaip 229 ********************************99988665666667 PP AA1_2.hmm 271 ..delealdDfkleplekeelleepdkeieldvemdnlkdgvnyaf 314 ++++ + D++l++++++++ +d++i+l + +k+++++ + 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 230 edKSFSGYTDVELSSADRQPA-FPVDRSIDLVLGGAFFKNNIPRDI 274 76667999**********555.569********************* PP AA1_2.hmm 315 fNnitYvapkvptlltvlssg 335 +NnitY +p++ptl+++ls g 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 275 VNNITYAEPHIPTLYSALSLG 295 ******************987 PP == domain 2 score: -0.4 bits; conditional E-value: 0.11 AA1_2.hmm 15 eievnkgdrvevkltNgledentslHfHGlfqn 47 +i ++++++e+ ++N + + +H HG ++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 310 TIVLKHNESIELVVYNPI-RIPHPMHLHGHVFQ 341 68889999**********.77999999997665 PP == domain 3 score: 2.9 bits; conditional E-value: 0.0099 AA1_2.hmm 65 pgetltYeftveeqvGtYWyHsHskgqYeDGlrgpli 101 + ++ +f++ ++ G + +H+H++ ++ G+ ++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 385 TMQYVKLRFRA-DNPGVWLFHCHMDIHFGMGMAMTFV 420 55555667777.99******************98887 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 132.8 0.0 3.3e-42 3.3e-42 82 297 .. 1 215 [. 1 225 [. 0.85 2 ? 2.8 0.0 0.012 0.012 94 126 .. 384 416 .. 380 425 .. 0.84 Alignments for each domain: == domain 1 score: 132.8 bits; conditional E-value: 3.3e-42 AA1_3.hmm 82 qDGvpgvtqCpiapgesftYefratqyGtswYHsHyslQyadGvlG 127 +DG++ vtqC i+pg+sftYe++++q Gt w H Hy Q adG+ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 1 MDGAAMVTQCGIPPGKSFTYEYEVNQAGTFWLHGHYHHQNADGLRT 46 7********************************************* PP AA1_3.hmm 128 plvinGPasanydvdlg.pllltdwshesafelveeae....asgg 168 pl+++ +++ y +d + ++ ++dw++es+ e ++ + + 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 47 PLIVHDRKQHLYKYDGEyVFAFEDWYKESFAERLALTIdpkkSFPP 92 **************98615568*******88877666656333334 PP AA1_3.hmm 169 ppvadniLingknkvkkskkeeegeysevklekgkkyrlrlintsv 214 + a n Ling +++ + ++++++++yr+rlin s+ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 93 ESPAPNALINGVDGNAT---------KPISFKPKRTYRIRLINMSA 129 456789*****877666.........5799**************** PP AA1_3.hmm 215 dstfkfsidgHkltviaaDfvpiepyttdslligigqRydvivean 260 +fkf++ gH+++vi+aD p ++d +++g gqR+ v+v+a 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 130 AVWFKFALPGHQMRVIEADGKYSVPLEVDGVTLGPGQRFSVLVSAL 175 *********************************************9 PP AA1_3.hmm 261 qe...eenywlraelaeaCsklnaeekeikailrYeeass 297 ++ + +y + + + + ++ k ++i++Y+++ s 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 176 DSasiNYQYLVEVFASFFPRIPGESPKYYTGIVEYNKDAS 215 9984444444444444334444588889999999998776 PP == domain 2 score: 2.8 bits; conditional E-value: 0.012 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvl 126 + + ++ +fra++ G +H H + ++ G++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 384 PTMQYVKLRFRADNPGVWLFHCHMDIHFGMGMA 416 555667789****************99999986 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 133.9 0.0 1.4e-42 1.4e-42 62 243 .. 1 182 [. 1 200 [. 0.84 2 ? -3.3 0.0 0.82 0.82 86 110 .. 395 419 .. 386 432 .. 0.78 Alignments for each domain: == domain 1 score: 133.9 bits; conditional E-value: 1.4e-42 AA1_1.hmm 62 adgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglr 107 +dg+a+vtqC i pg+sf+y+++v +qaGtfw H h++ q dglr 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 1 MDGAAMVTQCGIPPGKSFTYEYEV-NQAGTFWLHGHYHHQNADGLR 45 69*********************9.8******************** PP AA1_1.hmm 108 Galvvydpedplkslydvddestvitladwyhtaakell....... 146 +l+v+d+ +++ly d e v+ + dwy ++ e l 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 46 TPLIVHDR---KQHLYKYDGE-YVFAFEDWYKESFAERLaltidpk 87 *****665...6788988765.799******988666655778775 PP AA1_1.hmm 147 .klv..avadstlinGlgryaggpeaelavvnvekgkrYrfrlvsi 189 +++ a +linG+ a+ ++ + ++ Yr+rl+++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 88 kSFPpeSPAPNALINGVDGNAT------KPISFKPKRTYRIRLINM 127 5233112233457777644333......34788999********** PP AA1_1.hmm 190 scdpnftfsidghnltvieadgvntkpltvdsiqifagqrysvvle 235 s+ f+f++ gh++ vieadg + pl+vd +++ gqr+sv+++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 128 SAAVWFKFALPGHQMRVIEADGKYSVPLEVDGVTLGPGQRFSVLVS 173 *********************************************9 PP AA1_1.hmm 236 anqevd.nY 243 a + + nY 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 174 ALDSASiNY 182 954433255 PP == domain 2 score: -3.3 bits; conditional E-value: 0.82 AA1_1.hmm 86 pdqaGtfwYHshlstqycdglrGal 110 +d+ G + +H h+ + g+ ++ 82292|Coere1_GeneCatalog_proteins_20110909.aa.fasta|AA1_2|AA1_2 395 ADNPGVWLFHCHMDIHFGMGMAMTF 419 477899999***9999877765555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (472 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 106.08 // [ok]