# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA1/fasta_for_each_cluster/cluster_6.txt # target HMM database: merged_hmms/AA1.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA1/AA1_cluster_6.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: CDU22960.1|AA1 [L=708] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.6e-106 344.9 1.1 2e-106 344.6 1.1 1.1 1 AA1.hmm 4.7e-82 263.7 0.0 3.1e-79 254.5 0.0 2.1 2 AA1_2.hmm 7.4e-78 249.9 0.1 6.8e-77 246.7 0.0 2.0 2 AA1_3.hmm 1.8e-69 222.2 0.0 4e-69 221.0 0.0 1.5 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 344.6 1.1 2e-106 2e-106 8 357 .. 171 671 .. 159 672 .. 0.77 Alignments for each domain: == domain 1 score: 344.6 bits; conditional E-value: 2e-106 AA1.hmm 8 ersvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadG 102 ++ il+Ng+ PgP+ieanegDt+vv+V+N l ++gt+iHwhG++q+ t+++DG ag +qcpi++g ++tY+f++++q+G+yw+HsH++lqy+dG CDU22960.1|AA1 171 LKKRILINGKSPGPLIEANEGDTIVVKVRNFL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWWHSHSKLQYTDG 264 57889**************************9.79************************************************************ PP AA1.hmm 103 lrGaliirdpkske......kydvddeelvillsdwyhktaeell.......kenatgaepapdsllinGkgrlync...........s.....s 168 l+G l+++++ ++ +yd +e v+l++d+yh+ a+ ++ n ++a+p p+s+linG+g+++ c + + CDU22960.1|AA1 265 LYGGLVVHSK--NDpyrkcrDYD---DERVFLFADNYHDFADYIVsqllsaqGYNGSSAAPSPQSGLINGAGQFN-CtalfraktkqpGmptkcT 353 ********75..33345545566...678***********9999999997643347788899***********86.5466666555441454553 PP AA1.hmm 169 kle..vlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa..gnywiraslds...a...af 253 +l ++++ep+k+yr+r+in++++a+ +sid+H++ vi aDg++vkp +v+ + i+ Gqr dvl+++n+ + +++++r ++++ a ++ CDU22960.1|AA1 354 QLPtpTMDIEPNKRYRFRFINTGSHAQHIISIDDHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNKGKngDSFLLRSTMMTscfAfvdPL 448 333459**************************************************************99999877******7777576255655 PP AA1.hmm 254 dnttalailrYkg...assas......................................................................nvsf 275 + a +l+Yk + + CDU22960.1|AA1 449 LDPVANLTLQYKLpgsN---VrskppvphdwkhkmggqcqdlkdselipaidtsvsanhnplslgifnsqfgnlqlangttlgrfffdnitQ--- 537 66777889***775541...234556667777777777777777777888877666666666666665555555555555554444442221... PP AA1.hmm 276 vepstslleaysgvdetkaklkln...........................................hp..lhghdfvvv.....nfd......a 314 t++ hp lhg d++++ n++ CDU22960.1|AA1 538 ----TNY----------------VnkpylevthagqrinsstiasllipdeiwvadfiinnqdnfldHPfhLHGTDMHIIargqgNMTqaqwfaL 612 ....112................02222222233333334444555555556666666777788888*************877552223444441 PP AA1.hmm 315 edeak....................rdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 + rdt++v ++++vv+r++ad pg+w++hchi++Hl+ Gl CDU22960.1|AA1 613 ----NqngqpqgvnatglnlvnplrRDTITVTRSSYVVVRINADLPGTWPMHCHIAMHLAEGL 671 ....044445678888888999999*************************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 254.5 0.0 3.1e-79 3.1e-79 3 291 .. 173 502 .. 171 547 .. 0.88 2 ! 7.1 0.0 0.00052 0.00052 77 114 .. 652 690 .. 637 694 .. 0.81 Alignments for each domain: == domain 1 score: 254.5 bits; conditional E-value: 3.1e-79 AA1_2.hmm 3 rvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlr 97 + i +Ng+ P p ie+n+gd+++vk+ N l d+ ts+H+HG+fqn+t mDG ++ +qCpip g +ltY+f++e q+G+YW+HsHsk qY+DGl CDU22960.1|AA1 173 KRILINGKSPGPLIEANEGDTIVVKVRNFL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWWHSHSKLQYTDGLY 266 6799**************************.99************************************************************** PP AA1_2.hmm 98 gpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.........................netenatle 161 g l+++ k++py +yd+e ++ +d Yh+ + +v+++ls yn + a p p+s l+ + + t++ CDU22960.1|AA1 267 GGLVVHSKNDPYrkcrDYDDERVFLFADNYHDFADYIVSQLLSAqgYNGSSAAPSPQSGLIngagqfnctalfraktkqpgmptkcTQLPTPTMD 361 ************9999************************99987899999********************************998888999*** PP AA1_2.hmm 162 vepgktYllriinvgafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndts.knyalvakmdetmldvvpddlqlnvtst 255 +ep+k+Y++r+in+g a++ ++++dhem+++ +DG+ v+p++v+ + i +QR +vLv +++ ++ +++ l ++m ++ + +v + l++ + t CDU22960.1|AA1 362 IEPNKRYRFRFINTGSHAQHIISIDDHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNKGKNgDSFLLRSTMMTSCFAFVDPLLDPVANLT 456 *************************************************************99755499************************** PP AA1_2.hmm 256 lvydksaalaeas..........tvdelealdDfkleplekeelle 291 l+y+ ++ +++ + ++++l D +l p+ ++++ + CDU22960.1|AA1 457 LQYKLPGSNVRSKppvphdwkhkMGGQCQDLKDSELIPAIDTSVSA 502 ***8655555444333333322222555888888888877744433 PP == domain 2 score: 7.1 bits; conditional E-value: 0.00052 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.epyeydee 114 + Gt+ +H+H + Gl +++ i++k+ ++ + +e CDU22960.1|AA1 652 DLPGTWPMHCHIAMHLAEGLMAVVAIHPKKiQELPFSQE 690 568*************************99666566666 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 246.7 0.0 6.8e-77 6.8e-77 10 279 .. 150 444 .. 143 477 .. 0.89 2 ? 0.7 0.0 0.052 0.052 101 132 .. 647 678 .. 598 690 .. 0.86 Alignments for each domain: == domain 1 score: 246.7 bits; conditional E-value: 6.8e-77 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr 104 t +tr++++++t + apDG+ k+ +l+ng+ Pgp+iea+ GDt++v+v+n l+ +GtsiHwHG+ q++t +DG++g +qCpi+ g + tY+f+ CDU22960.1|AA1 150 TPRTRHFDWNITYGQSAPDGFLKKRILINGKSPGPLIEANEGDTIVVKVRNFLD-QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFK 243 6689***********************************************886.8*************************************** PP AA1_3.hmm 105 at.qyGtswYHsHyslQyadGvlGplvinG...P..asanydvdlgpllltdwshesafelveeae......asggppvadniLingknkvkksk 187 ++ qyG+ w+HsH lQy+dG++G+lv++ P + +yd +++l++d +h+ a+ +v++ s+++p+ +++Ling +++++++ CDU22960.1|AA1 244 IEgQYGSYWWHSHSKLQYTDGLYGGLVVHSkndPyrKCRDYDD-ERVFLFADNYHDFADYIVSQLLsaqgynGSSAAPSPQSGLINGAGQFNCTA 337 9769************************972224223356653.4778899****999999988776666655667799**************77 PP AA1_3.hmm 188 k.............eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqe..eenyw 267 ++ + ++ +e++k+yr+r+int+++++ +sid+H+++vi aD p++p +++ + i+ gqR dv+v++n+ +++ CDU22960.1|AA1 338 LfraktkqpgmptkCTQLPTPTMDIEPNKRYRFRFINTGSHAQHIISIDDHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNKGknGDSFL 432 6999*****9998766778889****************************************************************987789*** PP AA1_3.hmm 268 lraelaeaCskl 279 lr+++ ++C ++ CDU22960.1|AA1 433 LRSTMMTSCFAF 444 *********886 PP == domain 2 score: 0.7 bits; conditional E-value: 0.052 AA1_3.hmm 101 YefratqyGtswYHsHyslQyadGvlGplvin 132 + +a+ Gt H H+++ a+G++ + i+ CDU22960.1|AA1 647 VRINADLPGTWPMHCHIAMHLAEGLMAVVAIH 678 5567777799999*************999998 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 221.0 0.0 4e-69 4e-69 2 240 .. 166 426 .. 165 454 .. 0.93 2 ? -3.5 0.0 0.96 0.96 86 110 .. 651 675 .. 637 680 .. 0.77 Alignments for each domain: == domain 1 score: 221.0 bits; conditional E-value: 4e-69 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHs 96 +pDGf ++ +l+ng+ pgpli +++gd++ ++v n L+ + tsihwhg+fq++t ++dg a +qCPi +g +y+fk+++q G++w+Hs CDU22960.1|AA1 166 APDGFLKKRILINGKSPGPLIEANEGDTIVVKVRNFLD-----QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWWHS 255 69********************************9986.....689************************************************* PP AA1_1.hmm 97 hlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgryagg............. 166 h + qy dgl G lvv+ ++dp+++ d dde v+ +ad yh a + ++++ ++s+linG g+++ + CDU22960.1|AA1 256 HSKLQYTDGLYGGLVVHSKNDPYRKCRDYDDER-VFLFADNYHDFADYIVsqllsaqgyngsSAAPSPQSGLINGAGQFNCTalfraktkqpgmp 349 ******************************986.8899********99988899999999888889*************9877888999999998 PP AA1_1.hmm 167 ...peaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifagqrysvvleanqev 240 ++ + ++++e +krYrfr++++ +++++ +sid+h+++vi adg+ +kp++v++i i gqr+ v++++n+ CDU22960.1|AA1 350 tkcTQLPTPTMDIEPNKRYRFRFINTGSHAQHIISIDDHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNKGK 426 8777888999***************************************************************9754 PP == domain 2 score: -3.5 bits; conditional E-value: 0.96 AA1_1.hmm 86 pdqaGtfwYHshlstqycdglrGal 110 +d Gt+ H h+++ +gl + CDU22960.1|AA1 651 ADLPGTWPMHCHIAMHLAEGLMAVV 675 56789999******99999997665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (708 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 114.53 // Query: CBQ70903.1|AA1 [L=733] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3e-105 340.7 0.8 4.2e-105 340.2 0.8 1.1 1 AA1.hmm 1.3e-80 259.0 0.0 8.2e-78 249.8 0.0 2.2 2 AA1_2.hmm 2.1e-76 245.1 0.1 2.1e-75 241.8 0.0 2.0 2 AA1_3.hmm 5.1e-67 214.1 0.0 1.1e-66 213.0 0.0 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 340.2 0.8 4.2e-105 4.2e-105 9 357 .. 197 696 .. 186 697 .. 0.77 Alignments for each domain: == domain 1 score: 340.2 bits; conditional E-value: 4.2e-105 AA1.hmm 9 rsvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGl 103 ++ il+Ngq PgP+i anegDt+vv+V+N l ++gt+iHwhG++q+ t+++DG ag +qcpi++g ++tY+f++++q+G+ywyHsH+++q +dGl CBQ70903.1|AA1 197 KKRILINGQSPGPLIDANEGDTIVVKVRNFL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWYHSHSKMQLTDGL 290 6789**************************9.79************************************************************* PP AA1.hmm 104 rGaliirdpkske......kydvddeelvillsdwyhktaeell.......kenatgaepapdsllinGkgrlync...........s.....sk 169 +G l+++++ ++ +yd +e v+l++d+yh+ a+ ++ n + a+p p+s+linG+g++ c + ++ CBQ70903.1|AA1 291 YGGLVVHSK--NDpyrkcrDYD---DERVFLFNDNYHDFADYIVdqllsaqGYNGSAAAPSPQSGLINGAGQFD-CaavkraktpqpGmptkcTQ 379 *******75..33345545566...678***********9999999997643336778888***********75.55776666555414544523 PP AA1.hmm 170 le..vlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa..gnywiraslds...a...afd 254 l ++++ep+k+yr+r+in++++a+ +sidnH++ vi aDg++vkp +v+ + i+ Gqr dvl+++n + +++++r s+++ a ++ CBQ70903.1|AA1 380 LGtpTMDIEPNKKYRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNVGKegDSFLLRSSMMTscfAfvdPLL 474 22449***************************************************************9988877******77775762556556 PP AA1.hmm 255 nttalailrYkg...assas......................................................................nvsf. 275 + a +l+Yk+ + ++++ CBQ70903.1|AA1 475 DPVANLTLQYKRpgsN---VrprppvphdwkhkmgsqcqdlkdselipaidtsispnhnprslgifnsqfgnlqlangttlgrffidnvtQTNYv 566 6777889***885440...2445556566666666667777777777777777777777777777766666666666666555555533311111 PP AA1.hmm 276 vepstslleaysgvdetkaklkln...................................hp..lhghdfvvv.....nfd.....aedeak.... 319 ++p ++l hp lhg d+++v n++ a CBQ70903.1|AA1 567 NKPYLEL----------------ThagqqinsstiaslvvpddlwvadfiinnedtfldHPfhLHGTDMHIVargsgNMTqaqwlA----Lnang 641 2222222................022233333344444455556666666777788888*************77655222333440....04444 PP AA1.hmm 320 .................rdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 rdt++v ++++vv+r++ad pg+w++hchi++H++ Gl CBQ70903.1|AA1 642 qpqgvnatglnlvnplrRDTITVTRSSYVVVRINADLPGTWPMHCHIAMHVAEGL 696 55677888888888898*************************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 249.8 0.0 8.2e-78 8.2e-78 3 291 .. 198 527 .. 196 566 .. 0.90 2 ! 7.0 0.0 0.00056 0.00056 77 114 .. 677 715 .. 662 719 .. 0.82 Alignments for each domain: == domain 1 score: 249.8 bits; conditional E-value: 8.2e-78 AA1_2.hmm 3 rvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlr 97 + i +Ngq P p i++n+gd+++vk+ N l d+ ts+H+HG+fqn+t mDG ++ +qCpip g +ltY+f++e q+G+YWyHsHsk q +DGl CBQ70903.1|AA1 198 KRILINGQSPGPLIDANEGDTIVVKVRNFL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWYHSHSKMQLTDGLY 291 6799**************************.99************************************************************** PP AA1_2.hmm 98 gpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.........................netenatle 161 g l+++ k++py +yd+e ++ d Yh+ + +v+++ls yn ++a p p+s l+ + + t++ CBQ70903.1|AA1 292 GGLVVHSKNDPYrkcrDYDDERVFLFNDNYHDFADYIVDQLLSAqgYNGSAAAPSPQSGLIngagqfdcaavkraktpqpgmptkcTQLGTPTMD 386 ************9999************************99987899999********************************988888899*** PP AA1_2.hmm 162 vepgktYllriinvgafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndts.knyalvakmdetmldvvpddlqlnvtst 255 +ep+k+Y++r+invg a++ +++++hem+++ +DG+ v+p++v+ + i +QR +vLv ++ ++ +++ l ++m ++ + +v + l++ + t CBQ70903.1|AA1 387 IEPNKKYRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNVGKEgDSFLLRSSMMTSCFAFVDPLLDPVANLT 481 **************************************************************9755499************************** PP AA1_2.hmm 256 lvydksaalaeas..........tvdelealdDfkleplekeelle 291 l+y++ ++ ++ + +++++l D +l p+ ++++ + CBQ70903.1|AA1 482 LQYKRPGSNVRPRppvphdwkhkMGSQCQDLKDSELIPAIDTSISP 527 ***9876665555443333322222555677777777766655444 PP == domain 2 score: 7.0 bits; conditional E-value: 0.00056 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.epyeydee 114 + Gt+ +H+H + Gl +++ i++k+ ++ + +e CBQ70903.1|AA1 677 DLPGTWPMHCHIAMHVAEGLMAVVAIHPKKiQQLPFSQE 715 568*************************99666677766 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 241.8 0.0 2.1e-75 2.1e-75 10 279 .. 175 469 .. 169 505 .. 0.89 2 ? 0.8 0.0 0.05 0.05 102 132 .. 673 703 .. 661 716 .. 0.82 Alignments for each domain: == domain 1 score: 241.8 bits; conditional E-value: 2.1e-75 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr 104 t +tr++++++t + apDG+ k+ +l+ngq Pgp+i a+ GDt++v+v+n l+ +GtsiHwHG+ q++t +DG++g +qCpi+ g + tY+f+ CBQ70903.1|AA1 175 TPRTRHFDWTLTYGQSAPDGFLKKRILINGQSPGPLIDANEGDTIVVKVRNFLD-QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFK 268 6689***********************************************886.8*************************************** PP AA1_3.hmm 105 at.qyGtswYHsHyslQyadGvlGplvinG...P..asanydvdlgpllltdwshesafelveeae......asggppvadniLingknkvkksk 187 ++ qyG+ wYHsH +Q +dG++G+lv++ P + +yd +++l++d +h+ a+ +v++ s+++p+ +++Ling +++++ + CBQ70903.1|AA1 269 IEgQYGSYWYHSHSKMQLTDGLYGGLVVHSkndPyrKCRDYDD-ERVFLFNDNYHDFADYIVDQLLsaqgynGSAAAPSPQSGLINGAGQFDCAA 362 9769************************972224223356653.4788899*****99999998876666555566799**************77 PP AA1_3.hmm 188 k.............eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqe..eenyw 267 ++ + ++ +e++kkyr+r+in++++++ +sid+H+++vi aD p++p +++ + i+ gqR dv+v++n +++ CBQ70903.1|AA1 363 VkraktpqpgmptkCTQLGTPTMDIEPNKKYRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNVGkeGDSFL 457 6999******998766778889***************************************************************9776699*** PP AA1_3.hmm 268 lraelaeaCskl 279 lr+++ ++C ++ CBQ70903.1|AA1 458 LRSSMMTSCFAF 469 *********986 PP == domain 2 score: 0.8 bits; conditional E-value: 0.05 AA1_3.hmm 102 efratqyGtswYHsHyslQyadGvlGplvin 132 + +a+ Gt H H+++ a+G++ + i+ CBQ70903.1|AA1 673 RINADLPGTWPMHCHIAMHVAEGLMAVVAIH 703 566777799999**************99998 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 213.0 0.0 1.1e-66 1.1e-66 2 247 .. 191 460 .. 190 486 .. 0.91 Alignments for each domain: == domain 1 score: 213.0 bits; conditional E-value: 1.1e-66 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHs 96 +pDGf ++ +l+ng+ pgpli +++gd++ ++v n L+ + tsihwhg+fq++t ++dg a +qCPi +g +y+fk+++q G++wYHs CBQ70903.1|AA1 191 APDGFLKKRILINGQSPGPLIDANEGDTIVVKVRNFLD-----QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWYHS 280 69********************************9986.....689************************************************* PP AA1_1.hmm 97 hlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgryagg............. 166 h ++q dgl G lvv+ ++dp+++ d dde v+ + d yh a + ++++ ++s+linG g++ CBQ70903.1|AA1 281 HSKMQLTDGLYGGLVVHSKNDPYRKCRDYDDER-VFLFNDNYHDFADYIVdqllsaqgyngsAAAPSPQSGLINGAGQFDCAavkraktpqpgmp 374 ******************************986.8899********99988999999999888889************98655667778887876 PP AA1_1.hmm 167 ...peaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifagqrysvvlean..qevdnYwira 247 ++ ++++e +k+Yrfr++++ +++++ +sid+h+++vi adg+ +kp++v++i i gqr+ v++++n +e d + +r+ CBQ70903.1|AA1 375 tkcTQLGTPTMDIEPNKKYRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNvgKEGDSFLLRS 460 65555567789************************************************************998334455566665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (733 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 120.42 // Query: SJX65928.1|AA1 [L=753] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-105 340.7 0.8 4.6e-105 340.1 0.8 1.2 1 AA1.hmm 1.4e-80 258.8 0.0 8.8e-78 249.7 0.0 2.2 2 AA1_2.hmm 2.1e-76 245.1 0.1 2.3e-75 241.7 0.0 2.1 2 AA1_3.hmm 5.4e-67 214.1 0.0 1.2e-66 213.0 0.0 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 340.1 0.8 4.6e-105 4.6e-105 9 357 .. 217 716 .. 206 717 .. 0.77 Alignments for each domain: == domain 1 score: 340.1 bits; conditional E-value: 4.6e-105 AA1.hmm 9 rsvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGl 103 ++ il+Ngq PgP+i anegDt+vv+V+N l ++gt+iHwhG++q+ t+++DG ag +qcpi++g ++tY+f++++q+G+ywyHsH+++q +dGl SJX65928.1|AA1 217 KKRILINGQSPGPLIDANEGDTIVVKVRNFL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWYHSHSKMQLTDGL 310 6789**************************9.79************************************************************* PP AA1.hmm 104 rGaliirdpkske......kydvddeelvillsdwyhktaeell.......kenatgaepapdsllinGkgrlync...........s.....sk 169 +G l+++++ ++ +yd +e v+l++d+yh+ a+ ++ n + a+p p+s+linG+g++ c + ++ SJX65928.1|AA1 311 YGGLVVHSK--NDpyrkcrDYD---DERVFLFNDNYHDFADYIVdqllsaqGYNGSAAAPSPQSGLINGAGQFD-CaavkraktpqpGmptkcTQ 399 *******75..33345545566...678***********9999999997643336778888***********75.55776666555414544523 PP AA1.hmm 170 le..vlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa..gnywiraslds...a...afd 254 l ++++ep+k+yr+r+in++++a+ +sidnH++ vi aDg++vkp +v+ + i+ Gqr dvl+++n + +++++r s+++ a ++ SJX65928.1|AA1 400 LGtpTMDIEPNKKYRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNVGKegDSFLLRSSMMTscfAfvdPLL 494 22449***************************************************************9988877******77775762556556 PP AA1.hmm 255 nttalailrYkg...assas......................................................................nvsf. 275 + a +l+Yk+ + ++++ SJX65928.1|AA1 495 DPVANLTLQYKRpgsN---VrprppvphdwkhkmgsqcqdlkdselipaidtsispnhnprslgifnsqfgnlqlangttlgrffidnvtQTNYv 586 6777889***885440...2445556566666666667777777777777777777777777777766666666666666555555533311111 PP AA1.hmm 276 vepstslleaysgvdetkaklkln...................................hp..lhghdfvvv.....nfd.....aedeak.... 319 ++p ++l hp lhg d+++v n++ a SJX65928.1|AA1 587 NKPYLEL----------------ThagqqinsstiaslvvpddlwvadfiinnedtfldHPfhLHGTDMHIVargsgNMTqaqwlA----Lnang 661 2222222................022233333344444455556666666777788888*************77655222333440....04444 PP AA1.hmm 320 .................rdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 rdt++v ++++vv+r++ad pg+w++hchi++H++ Gl SJX65928.1|AA1 662 qpqgvnatglnlvnplrRDTITVTRSSYVVVRINADLPGTWPMHCHIAMHVAEGL 716 55677888888888898*************************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 249.7 0.0 8.8e-78 8.8e-78 3 291 .. 218 547 .. 216 586 .. 0.90 2 ! 7.0 0.0 0.00058 0.00058 77 114 .. 697 735 .. 682 739 .. 0.82 Alignments for each domain: == domain 1 score: 249.7 bits; conditional E-value: 8.8e-78 AA1_2.hmm 3 rvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlr 97 + i +Ngq P p i++n+gd+++vk+ N l d+ ts+H+HG+fqn+t mDG ++ +qCpip g +ltY+f++e q+G+YWyHsHsk q +DGl SJX65928.1|AA1 218 KRILINGQSPGPLIDANEGDTIVVKVRNFL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWYHSHSKMQLTDGLY 311 6799**************************.99************************************************************** PP AA1_2.hmm 98 gpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.........................netenatle 161 g l+++ k++py +yd+e ++ d Yh+ + +v+++ls yn ++a p p+s l+ + + t++ SJX65928.1|AA1 312 GGLVVHSKNDPYrkcrDYDDERVFLFNDNYHDFADYIVDQLLSAqgYNGSAAAPSPQSGLIngagqfdcaavkraktpqpgmptkcTQLGTPTMD 406 ************9999************************99987899999********************************988888899*** PP AA1_2.hmm 162 vepgktYllriinvgafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndts.knyalvakmdetmldvvpddlqlnvtst 255 +ep+k+Y++r+invg a++ +++++hem+++ +DG+ v+p++v+ + i +QR +vLv ++ ++ +++ l ++m ++ + +v + l++ + t SJX65928.1|AA1 407 IEPNKKYRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNVGKEgDSFLLRSSMMTSCFAFVDPLLDPVANLT 501 **************************************************************9755499************************** PP AA1_2.hmm 256 lvydksaalaeas..........tvdelealdDfkleplekeelle 291 l+y++ ++ ++ + +++++l D +l p+ ++++ + SJX65928.1|AA1 502 LQYKRPGSNVRPRppvphdwkhkMGSQCQDLKDSELIPAIDTSISP 547 ***9876665555443333322222555677777777766655444 PP == domain 2 score: 7.0 bits; conditional E-value: 0.00058 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.epyeydee 114 + Gt+ +H+H + Gl +++ i++k+ ++ + +e SJX65928.1|AA1 697 DLPGTWPMHCHIAMHVAEGLMAVVAIHPKKiQQLPFSQE 735 568*************************99666677766 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 241.7 0.0 2.3e-75 2.3e-75 10 279 .. 195 489 .. 189 525 .. 0.89 2 ? 0.7 0.0 0.054 0.054 102 132 .. 693 723 .. 682 736 .. 0.82 Alignments for each domain: == domain 1 score: 241.7 bits; conditional E-value: 2.3e-75 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr 104 t +tr++++++t + apDG+ k+ +l+ngq Pgp+i a+ GDt++v+v+n l+ +GtsiHwHG+ q++t +DG++g +qCpi+ g + tY+f+ SJX65928.1|AA1 195 TPRTRHFDWTLTYGQSAPDGFLKKRILINGQSPGPLIDANEGDTIVVKVRNFLD-QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFK 288 6689***********************************************886.8*************************************** PP AA1_3.hmm 105 at.qyGtswYHsHyslQyadGvlGplvinG...P..asanydvdlgpllltdwshesafelveeae......asggppvadniLingknkvkksk 187 ++ qyG+ wYHsH +Q +dG++G+lv++ P + +yd +++l++d +h+ a+ +v++ s+++p+ +++Ling +++++ + SJX65928.1|AA1 289 IEgQYGSYWYHSHSKMQLTDGLYGGLVVHSkndPyrKCRDYDD-ERVFLFNDNYHDFADYIVDQLLsaqgynGSAAAPSPQSGLINGAGQFDCAA 382 9769************************972224223356653.4788899*****99999998876666555566799**************77 PP AA1_3.hmm 188 k.............eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqe..eenyw 267 ++ + ++ +e++kkyr+r+in++++++ +sid+H+++vi aD p++p +++ + i+ gqR dv+v++n +++ SJX65928.1|AA1 383 VkraktpqpgmptkCTQLGTPTMDIEPNKKYRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNVGkeGDSFL 477 6999******998766778889***************************************************************9776699*** PP AA1_3.hmm 268 lraelaeaCskl 279 lr+++ ++C ++ SJX65928.1|AA1 478 LRSSMMTSCFAF 489 *********986 PP == domain 2 score: 0.7 bits; conditional E-value: 0.054 AA1_3.hmm 102 efratqyGtswYHsHyslQyadGvlGplvin 132 + +a+ Gt H H+++ a+G++ + i+ SJX65928.1|AA1 693 RINADLPGTWPMHCHIAMHVAEGLMAVVAIH 723 566777799999**************99998 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 213.0 0.0 1.2e-66 1.2e-66 2 247 .. 211 480 .. 210 506 .. 0.91 Alignments for each domain: == domain 1 score: 213.0 bits; conditional E-value: 1.2e-66 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHs 96 +pDGf ++ +l+ng+ pgpli +++gd++ ++v n L+ + tsihwhg+fq++t ++dg a +qCPi +g +y+fk+++q G++wYHs SJX65928.1|AA1 211 APDGFLKKRILINGQSPGPLIDANEGDTIVVKVRNFLD-----QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWYHS 300 69********************************9986.....689************************************************* PP AA1_1.hmm 97 hlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgryagg............. 166 h ++q dgl G lvv+ ++dp+++ d dde v+ + d yh a + ++++ ++s+linG g++ SJX65928.1|AA1 301 HSKMQLTDGLYGGLVVHSKNDPYRKCRDYDDER-VFLFNDNYHDFADYIVdqllsaqgyngsAAAPSPQSGLINGAGQFDCAavkraktpqpgmp 394 ******************************986.8899********99988999999999888889************98655667778887876 PP AA1_1.hmm 167 ...peaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifagqrysvvlean..qevdnYwira 247 ++ ++++e +k+Yrfr++++ +++++ +sid+h+++vi adg+ +kp++v++i i gqr+ v++++n +e d + +r+ SJX65928.1|AA1 395 tkcTQLGTPTMDIEPNKKYRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNvgKEGDSFLLRS 480 65555567789************************************************************998334455566665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (753 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 122.91 // Query: CDI56287.1|AA1 [L=688] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.1e-108 350.2 1.2 5.3e-108 349.8 1.2 1.1 1 AA1.hmm 2.5e-82 264.6 0.0 1.4e-80 258.9 0.0 2.1 2 AA1_2.hmm 2.4e-78 251.5 0.4 9.4e-78 249.5 0.1 1.8 2 AA1_3.hmm 2.5e-68 218.4 0.0 4.3e-68 217.7 0.0 1.4 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 349.8 1.2 5.3e-108 5.3e-108 9 357 .. 159 651 .. 148 652 .. 0.78 Alignments for each domain: == domain 1 score: 349.8 bits; conditional E-value: 5.3e-108 AA1.hmm 9 rsvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGl 103 ++ il+Ng PgP+ieanegDt+vv+V+N l +egt+iHwhG++q+ t+++DG ag +qcpi++g ++tY+f++++q+G+yw+HsH+++qy+dGl CDI56287.1|AA1 159 KKRILINGASPGPLIEANEGDTIVVHVKNFL-DEGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWWHSHSKMQYTDGL 252 6789**************************9.89************************************************************* PP AA1.hmm 104 rGaliirdpkske......kydvddeelvillsdwyhktaeell.......kenatgaepapdsllinGkgrlync...........s....... 167 +G li++++ ++ +yd +e+v+l++d+yh+ a++++ n t a+p p+s+linGkg+++ c + CDI56287.1|AA1 253 YGGLIVHSQ--NDpyqkcrDYD---HEKVFLFADNYHDFADDIVnqllsaqGYNGTAAAPSPQSGLINGKGQFN-CtalaraktkqpGmpsqciq 341 *******64..33334445555...677****************99998643447888999***********85.54676666655514445655 PP AA1.hmm 168 sklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa..gnywiraslds...a...afd 254 k + +v p+k+yr+r+in++++a+ +sidnH+l+vi aDg++vkp +v+ + ia Gqr dvl+++n + +++++r s+++ a ++ CDI56287.1|AA1 342 LKAPSASVVPNKRYRFRFINTGSHAQHIISIDNHELQVISADGTPVKPHKVHRIPIANGQRHDVLVDTNVGKdgDSFLLRSSMMTacfAfvdPLL 436 44569****************************************************************999767******88886762556556 PP AA1.hmm 255 nttalailrYkg...assas........................................................................... 271 + a +l+Yk+ + CDI56287.1|AA1 437 DPVANLTLHYKQpgsS---Vkrkapvpndwkdamgtqckdlddselipaidtsippnhninslgifnsqfgnlklangttlgrffidnithtnyv 528 6777889***885440...2455567777777777778888888888877777777777777777777777666666666666666544322222 PP AA1.hmm 272 nvsfvepstslleaysgvdetkaklkln......................................hp..lhghdfvvv......nfd....... 313 n +p hp lhg d+++v + CDI56287.1|AA1 529 N----KPY-------------------LelthrgqqinsstvaslvvpddvwvadfiinnqdnfldHPfhLHGTDMHLVargsgnM-Tqaqwial 599 0....222...................022222222222233333444555555666667777888*************8887750.23445544 PP AA1.hmm 314 ........aedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 +++ +rdt++v ++++vvir+ a+ pgvw+lhchi++H++ Gl CDI56287.1|AA1 600 nqqgtglnLNNPLRRDTISVTRSSYVVIRILANLPGVWPLHCHIAMHVAEGL 651 44456665666666*************************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 258.9 0.0 1.4e-80 1.4e-80 3 296 .. 160 494 .. 158 535 .. 0.88 2 ! 3.6 0.0 0.0063 0.0063 79 115 .. 634 671 .. 619 674 .. 0.85 Alignments for each domain: == domain 1 score: 258.9 bits; conditional E-value: 1.4e-80 AA1_2.hmm 3 rvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlr 97 + i +Ng P p ie+n+gd+++v+++N l de ts+H+HG+fqn+t mDG ++ +qCpip g +ltY+f++e q+G+YW+HsHsk qY+DGl CDI56287.1|AA1 160 KRILINGASPGPLIEANEGDTIVVHVKNFL-DEGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWWHSHSKMQYTDGLY 253 6799**************************.99************************************************************** PP AA1_2.hmm 98 gpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.........................netenatle 161 g li++ +++py +yd+e ++ +d Yh+ +++v+++ls yn t+a p p+s l+ + + + + CDI56287.1|AA1 254 GGLIVHSQNDPYqkcrDYDHEKVFLFADNYHDFADDIVNQLLSAqgYNGTAAAPSPQSGLIngkgqfnctalaraktkqpgmpsqcIQLKAPSAS 348 ************99999***********************9998789************************************99888888999* PP AA1_2.hmm 162 vepgktYllriinvgafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndts.knyalvakmdetmldvvpddlqlnvtst 255 v p+k+Y++r+in+g a++ +++++he++++++DG+ v+p++v+ + ia +QR +vLv ++ ++ +++ l ++m + + +v + l++ + t CDI56287.1|AA1 349 VVPNKRYRFRFINTGSHAQHIISIDNHELQVISADGTPVKPHKVHRIPIANGQRHDVLVDTNVGKDgDSFLLRSSMMTACFAFVDPLLDPVANLT 443 **************************************************************9766499************************** PP AA1_2.hmm 256 lvydksaalaeas......tv....delealdDfkleplekeelleepdke 296 l y++ + + + +++++ldD +l p+ ++++ ++ + + CDI56287.1|AA1 444 LHYKQPGSSVKRKapvpndWKdamgTQCKDLDDSELIPAIDTSIPPNHNIN 494 ***997666555544444411333466799999999999986665554433 PP == domain 2 score: 3.6 bits; conditional E-value: 0.0063 AA1_2.hmm 79 vGtYWyHsHskgqYeDGlrgpliiedke.epyeydeel 115 G + +H+H + Gl +++ i++k+ +++ + +e+ CDI56287.1|AA1 634 PGVWPLHCHIAMHVAEGLMAAVAIHPKKiQQMPFSQEV 671 577889********************996666777765 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 249.5 0.1 9.4e-78 9.4e-78 10 280 .. 137 432 .. 132 471 .. 0.87 2 ? -0.6 0.0 0.13 0.13 113 132 .. 639 658 .. 622 670 .. 0.86 Alignments for each domain: == domain 1 score: 249.5 bits; conditional E-value: 9.4e-78 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr 104 t +tre+++++t apDG+ k+ +l+ng Pgp+iea+ GDt++v+vkn l+ +GtsiHwHG+ q++t +DG++g +qCpi+ g + tY+f+ CDI56287.1|AA1 137 TPRTREFDWTLTYGRSAPDGFLKKRILINGASPGPLIEANEGDTIVVHVKNFLD-EGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFK 230 5689***********************************************886.9*************************************** PP AA1_3.hmm 105 at.qyGtswYHsHyslQyadGvlGplvinG...Pasanydvdl.gpllltdwshesafelveeae......asggppvadniLingknkvkkskk 188 ++ qyG+ w+HsH +Qy+dG++G+l+++ P ++ d+d +++l++d +h+ a+++v++ ++++p+ +++Lingk+++++++ CDI56287.1|AA1 231 IEgQYGSYWWHSHSKMQYTDGLYGGLIVHSqndPYQKCRDYDHeKVFLFADNYHDFADDIVNQLLsaqgynGTAAAPSPQSGLINGKGQFNCTAL 325 9769************************96333555555555525667899****99999999876666655666799**************776 PP AA1_3.hmm 189 .............eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqe..eenywl 268 + + + ++ ++k+yr+r+int+++++ +sid+H+l+vi+aD p++p +++ + i+ gqR dv+v++n +++ l CDI56287.1|AA1 326 araktkqpgmpsqCIQLKAPSASVVPNKRYRFRFINTGSHAQHIISIDNHELQVISADGTPVKPHKVHRIPIANGQRHDVLVDTNVGkdGDSFLL 420 9999*999998765577778899*************************************************************9876799**** PP AA1_3.hmm 269 raelaeaCskln 280 r+++ +aC ++ CDI56287.1|AA1 421 RSSMMTACFAFV 432 ********9874 PP == domain 2 score: -0.6 bits; conditional E-value: 0.13 AA1_3.hmm 113 YHsHyslQyadGvlGplvin 132 H H+++ a+G++ ++ i+ CDI56287.1|AA1 639 LHCHIAMHVAEGLMAAVAIH 658 6*****************99 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 217.7 0.0 4.3e-68 4.3e-68 2 249 .. 153 424 .. 152 489 .. 0.87 Alignments for each domain: == domain 1 score: 217.7 bits; conditional E-value: 4.3e-68 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHs 96 +pDGf ++ +l+ng pgpli +++gd++ ++v+n L++ tsihwhg+fq++t ++dg a +qCPi +g +y+fk+++q G++w+Hs CDI56287.1|AA1 153 APDGFLKKRILINGASPGPLIEANEGDTIVVHVKNFLDE-----GTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWWHS 242 69*********************************9975.....79************************************************* PP AA1_1.hmm 97 hlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgryagg............. 166 h ++qy dgl G l+v+ ++dp+++ d d+e+ v+ +ad yh a ++ ++++ ++s+linG+g+++ + CDI56287.1|AA1 243 HSKMQYTDGLYGGLIVHSQNDPYQKCRDYDHEK-VFLFADNYHDFADDIVnqllsaqgyngtAAAPSPQSGLINGKGQFNCTalaraktkqpgmp 336 *****************************9986.8899********99988999999999887889*************9776777777775554 PP AA1_1.hmm 167 ...peaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifagqrysvvlean..qevdnYwiranp 249 + + +v +krYrfr++++ +++++ +sid+h+l+vi adg+ +kp++v++i i gqr+ v++++n ++ d + +r+++ CDI56287.1|AA1 337 sqcIQLKAPSASVVPNKRYRFRFINTGSHAQHIISIDNHELQVISADGTPVKPHKVHRIPIANGQRHDVLVDTNvgKDGDSFLLRSSM 424 433333444567999********************************************************99933444566666665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (688 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 117.50 // Query: SAM64516.1|AA1 [L=778] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.9e-108 351.2 0.0 2.7e-108 350.8 0.0 1.1 1 AA1.hmm 2e-83 268.2 0.0 9.3e-82 262.8 0.0 2.1 2 AA1_2.hmm 3.3e-78 251.0 0.0 2.1e-77 248.4 0.0 1.9 2 AA1_3.hmm 2.2e-68 218.6 0.0 3.5e-68 218.0 0.0 1.4 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 350.8 0.0 2.7e-108 2.7e-108 9 357 .. 246 738 .. 237 739 .. 0.77 Alignments for each domain: == domain 1 score: 350.8 bits; conditional E-value: 2.7e-108 AA1.hmm 9 rsvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGl 103 ++ il+Ngq PgP+iea+egDt+vv+V+N+l ++gt+iHwhG++q+ t+++DG ag +qcpi++g ++tY+f++++q+G+yw+HsH+++qy+dGl SAM64516.1|AA1 246 KKRILINGQSPGPLIEASEGDTIVVKVKNRL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGELTYRFKIEGQYGSYWWHSHSKMQYTDGL 339 6789**************************9.79************************************************************* PP AA1.hmm 104 rGaliirdpkske......kydvddeelvillsdwyhktaeell.......kenatgaepapdsllinGkgrlync...........s.....sk 169 +G liir++ ++ +yd +e+v+l++d+yh+ a++++ n ++a+p p+s+linGkg++ c + ++ SAM64516.1|AA1 340 YGGLIIRSK--DDpyqkcrDYD---DEKVFLFADNYHDFADDIVnqllsvkGYNGSSAAPSPQSGLINGKGQFD-CaglarakgkqpGmpskcTQ 428 *******75..23234445566...677****************99998864457889999***********75.55776666555415545633 PP AA1.hmm 170 le..vlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa..gnywiraslds...a...afd 254 l ++++epgk+yr+r+in++++a+ +sid+H+++vi Dg++vkp +v+ + ia Gqr dvl++++ + +++++r ++++ + ++ SAM64516.1|AA1 429 LPtpTMDIEPGKKYRFRFINTGSHAQHIISIDDHEMEVIGSDGTPVKPHKVHRIPIANGQRHDVLVNTTVGKngDSFLLRSTMMTacfSfvdPLL 523 33459**************************************************************77766667******88886662556556 PP AA1.hmm 255 nttalailrYkg...assas.........................................................................nv 273 + a +l+Yk+ + + SAM64516.1|AA1 524 DPVANLTLQYKRpgsH---VrprppkphdwidtmgtlckdlddselvpaidtsvpanlnpnslgifnsqfgnlvlangstlgrffidnithtnY- 614 6777889***884430...255666667777778888888888888888888787777777777777777777777777776666664442210. PP AA1.hmm 274 sfvepstslleaysgvdetkaklkln............................hp..lhghdfvvv........nfd.............aede 317 +++p ++l a +++ n hp lhg d++++ + + +++ SAM64516.1|AA1 615 -VNKPYLELARAGQQI---------NsstvasllvpddvwvadiiinnqdnfldHPfhLHGTDMHIIargtgnltQ-EgwsklnqqpgalnLHNP 698 .122222222222222.........02233333344444555555667777888*************887765441.144433333444444555 PP AA1.hmm 318 akrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 +rdtv+v +++w+v r++ad pgvw+lhchi++H++ Gl SAM64516.1|AA1 699 LRRDTVSVTRSSWIVARIKADLPGVWPLHCHIAMHVAEGL 738 55*************************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 262.8 0.0 9.3e-82 9.3e-82 2 292 .. 246 577 .. 245 621 .. 0.89 2 ! 3.2 0.0 0.0081 0.0081 79 113 .. 721 756 .. 707 760 .. 0.84 Alignments for each domain: == domain 1 score: 262.8 bits; conditional E-value: 9.3e-82 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGl 96 ++ i +Ngq P p ie+++gd+++vk++N+l d+ ts+H+HG+fqn+t mDG ++ +qCpip g +ltY+f++e q+G+YW+HsHsk qY+DGl SAM64516.1|AA1 246 KKRILINGQSPGPLIEASEGDTIVVKVKNRL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGELTYRFKIEGQYGSYWWHSHSKMQYTDGL 339 56799**************************.99************************************************************* PP AA1_2.hmm 97 rgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.........................netenatl 160 g lii+ k++py +yd+e ++ +d Yh+ +++v+++ls+ yn + a p p+s l+ + + t+ SAM64516.1|AA1 340 YGGLIIRSKDDPYqkcrDYDDEKVFLFADNYHDFADDIVNQLLSVkgYNGSSAAPSPQSGLIngkgqfdcaglarakgkqpgmpskcTQLPTPTM 434 ************999999***********************99987899999********************************998888999** PP AA1_2.hmm 161 evepgktYllriinvgafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndts.knyalvakmdetmldvvpddlqlnvts 254 ++epgk+Y++r+in+g a++ ++++dhem+++ DG+ v+p++v+ + ia +QR +vLv++ ++ +++ l ++m + + +v + l++ + SAM64516.1|AA1 435 DIEPGKKYRFRFINTGSHAQHIISIDDHEMEVIGSDGTPVKPHKVHRIPIANGQRHDVLVNTTVGKNgDSFLLRSTMMTACFSFVDPLLDPVANL 529 *************************************************************998755499************************* PP AA1_2.hmm 255 tlvydksaalaeas......tvdel....ealdDfkleplekeellee 292 tl+y++ ++ ++ +d++ ++ldD +l+p+ ++++ ++ SAM64516.1|AA1 530 TLQYKRPGSHVRPRppkphdWIDTMgtlcKDLDDSELVPAIDTSVPAN 577 ****98766655554455665555566679*********988665544 PP == domain 2 score: 3.2 bits; conditional E-value: 0.0081 AA1_2.hmm 79 vGtYWyHsHskgqYeDGlrgpliiedke.epyeyde 113 G + +H+H + Gl +++ i++k+ ++ ++ + SAM64516.1|AA1 721 PGVWPLHCHIAMHVAEGLMAAVAIHPKKiQQLKFSQ 756 678889********************9966667766 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 248.4 0.0 2.1e-77 2.1e-77 10 279 .. 224 518 .. 219 546 .. 0.89 2 ? -0.2 0.0 0.1 0.1 109 133 .. 722 746 .. 706 757 .. 0.83 Alignments for each domain: == domain 1 score: 248.4 bits; conditional E-value: 2.1e-77 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr 104 t +tre+++++t apDG+ k+ +l+ngq Pgp+iea+ GDt++v+vkn+l+ +GtsiHwHG+ q++t +DG++g +qCpi+ g + tY+f+ SAM64516.1|AA1 224 TPRTREFDWTLTYGPSAPDGFVKKRILINGQSPGPLIEASEGDTIVVKVKNRLD-QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGELTYRFK 317 5689************************************************97.8*************************************** PP AA1_3.hmm 105 at.qyGtswYHsHyslQyadGvlGplvinG...Pasanydvd.lgpllltdwshesafelveeae......asggppvadniLingknkvkkskk 188 ++ qyG+ w+HsH +Qy+dG++G+l+i+ P ++ d+d +++l++d +h+ a+++v++ s+++p+ +++Lingk+++++ SAM64516.1|AA1 318 IEgQYGSYWWHSHSKMQYTDGLYGGLIIRSkddPYQKCRDYDdEKVFLFADNYHDFADDIVNQLLsvkgynGSSAAPSPQSGLINGKGQFDCAGL 412 9769************************8633365554444414778889*********9999887767655667799**************877 PP AA1_3.hmm 189 .............eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqe..eenywl 268 ++ + ++ +e+gkkyr+r+int+++++ +sid+H+++vi +D p++p +++ + i+ gqR dv+v+++ +++ l SAM64516.1|AA1 413 arakgkqpgmpskCTQLPTPTMDIEPGKKYRFRFINTGSHAQHIISIDDHEMEVIGSDGTPVKPHKVHRIPIANGQRHDVLVNTTVGknGDSFLL 507 999*****9998767788889*************************************************************998665699**** PP AA1_3.hmm 269 raelaeaCskl 279 r+++ +aC ++ SAM64516.1|AA1 508 RSTMMTACFSF 518 ********886 PP == domain 2 score: -0.2 bits; conditional E-value: 0.1 AA1_3.hmm 109 GtswYHsHyslQyadGvlGplvinG 133 G H H+++ a+G++ ++ i+ SAM64516.1|AA1 722 GVWPLHCHIAMHVAEGLMAAVAIHP 746 66667*****************994 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 218.0 0.0 3.5e-68 3.5e-68 2 250 .. 240 512 .. 239 577 .. 0.89 Alignments for each domain: == domain 1 score: 218.0 bits; conditional E-value: 3.5e-68 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHs 96 +pDGf ++ +l+ng+ pgpli +++gd++ ++v+n+L+ + tsihwhg+fq++t ++dg a +qCPi +g +y+fk+++q G++w+Hs SAM64516.1|AA1 240 APDGFVKKRILINGQSPGPLIEASEGDTIVVKVKNRLD-----QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGELTYRFKIEGQYGSYWWHS 329 69*********************************996.....689************************************************* PP AA1_1.hmm 97 hlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgryagg............. 166 h ++qy dgl G l++ ++dp+++ d dde+ v+ +ad yh a ++ ++++ ++s+linG+g++ SAM64516.1|AA1 330 HSKMQYTDGLYGGLIIRSKDDPYQKCRDYDDEK-VFLFADNYHDFADDIVnqllsvkgyngsSAAPSPQSGLINGKGQFDCAglarakgkqpgmp 423 ******************************986.8899*********9988999999999888889************98544777888999998 PP AA1_1.hmm 167 ...peaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifagqrysvvlean..qevdnYwiranpn 250 ++ + ++++e gk+Yrfr++++ +++++ +sid+h+++vi dg+ +kp++v++i i gqr+ v++++ ++ d + +r+++ SAM64516.1|AA1 424 skcTQLPTPTMDIEPGKKYRFRFINTGSHAQHIISIDDHEMEVIGSDGTPVKPHKVHRIPIANGQRHDVLVNTTvgKNGDSFLLRSTMM 512 8878888999************************************************************9975225556666666655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (778 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 126.02 // Query: 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 [L=706] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-105 340.9 0.3 3.4e-105 340.6 0.3 1.1 1 AA1.hmm 3.6e-87 280.5 0.0 7e-84 269.7 0.0 2.1 2 AA1_2.hmm 2.7e-76 244.7 0.0 1.2e-74 239.3 0.0 2.1 2 AA1_3.hmm 1.1e-68 219.6 0.0 2e-68 218.7 0.0 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 340.6 0.3 3.4e-105 3.4e-105 9 357 .. 170 668 .. 157 669 .. 0.77 Alignments for each domain: == domain 1 score: 340.6 bits; conditional E-value: 3.4e-105 AA1.hmm 9 rsvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGva 63 ++ ilvNgq P P+ie+negDt++v+VtN l +egt+iHwhG++q++t+++DG a 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 170 KKRILVNGQSPAPLIEVNEGDTLIVKVTNLL-DEGTSIHWHGMFQNNTPFMDGIA 223 6789**************************9.89********************* PP AA1.hmm 64 gvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpkske.. 116 g +qcpi+pg ++tY+f++++q+G+yw HsH+++qy+dGl+G li++++ ++ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 224 GFSQCPIPPGGHLTYRFKIEGQYGSYWVHSHSKMQYTDGLYGGLIVHSK--NDpy 276 ***********************************************75..3334 PP AA1.hmm 117 ....kydvddeelvillsdwyhktaeell.......kenatgaepapdsllinGk 160 +yd +e v+l++d+yh+ a+ ++ n t a+p p+s+linG+ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 277 qkcrDYD---DERVFLFADNYHDFADYIVkqllsaqGYNGTAAAPSPQSGLINGA 328 4545566...678***********9999999998643447888999********* PP AA1.hmm 161 grlync...........s.......skle..vlkvepgktyrlrlinaalnaelt 195 g++ c + ++++ep+k+yr+r+in++++a+ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 329 GQFD-CaalarargkqpGmptrceqL--PtpTMDIEPNKKYRFRFINTGSHAQHI 380 **75.657776666555155556333..3459*********************** PP AA1.hmm 196 fsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa..gnywirasl 248 +sid+H++ vi aDg+ vkp v+ + i+ Gqr dvl+++nq + +++++r ++ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 381 ISIDDHEMYVIGADGTAVKPHRVHRVPIHNGQRHDVLVETNQGVdgDSFLLRSTM 435 ********************************************877******88 PP AA1.hmm 249 ds...a...afdnttalailrYkg...assas....................... 271 ++ + ++ n a +lrYk + 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 436 MTacfSfvdPLLNPVANLTLRYKLpgsD---Vpsrppvphdwkdamgsqcqdldd 487 8866625566678889999***775540...244555666666666677777777 PP AA1.hmm 272 ...............................................nvsfveps 279 +++ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 488 selipavytsvppnhdinslaifnsqfgnlqlangttlgrffvdnitQTN----- 537 77788777777776666666666666665555555555444444333112..... PP AA1.hmm 280 tslleaysgvdetka.......klkln............................ 299 + 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 538 --------------FvnkpyleV---Thrgghinttsvasllvpddvwvadfiin 575 ..............122222220...02233333334444445555666666677 PP AA1.hmm 300 .......hp..lhghdfvvv........nfd....aedeak.............. 319 hp lh d+++v + + + 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 576 nedtfldHPfhLHATDMHIVargsgsmtR-EqwvaL----Ndgeaqgvnrtalnl 625 7788888*************877664431.144552....033335666778888 PP AA1.hmm 320 .....rdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 rdt++v +++++v r++ad pgvw++hchi++H++ Gl 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 626 vnplrRDTITVTRSSYIVARIIADLPGVWAMHCHIAMHVAEGL 668 88888*************************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 269.7 0.0 7e-84 7e-84 3 296 .. 171 505 .. 169 539 .. 0.90 2 ! 8.7 0.0 0.00018 0.00018 78 115 .. 650 688 .. 636 693 .. 0.88 Alignments for each domain: == domain 1 score: 269.7 bits; conditional E-value: 7e-84 AA1_2.hmm 3 rvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasm 57 + i vNgq P p ievn+gd+++vk+tN l de ts+H+HG+fqn+t mDG ++ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 171 KRILVNGQSPAPLIEVNEGDTLIVKVTNLL-DEGTSIHWHGMFQNNTPFMDGIAG 224 6799**************************.99********************** PP AA1_2.hmm 58 vtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeepy... 109 +qCpippg +ltY+f++e q+G+YW+HsHsk qY+DGl g li++ k++py 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 225 FSQCPIPPGGHLTYRFKIEGQYGSYWVHSHSKMQYTDGLYGGLIVHSKNDPYqkc 279 ****************************************************999 PP AA1_2.hmm 110 .eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv......... 152 +yd+e ++ +d Yh+ + +vk++ls yn t+a p p+s l+ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 280 rDYDDERVFLFADNYHDFADYIVKQLLSAqgYNGTAAAPSPQSGLIngagqfdca 334 99***********************9998789*********************** PP AA1_2.hmm 153 ................netenatlevepgktYllriinvgafasqylvledhemt 191 ++ + t+++ep+k+Y++r+in+g a++ ++++dhem 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 335 alarargkqpgmptrcEQLPTPTMDIEPNKKYRFRFINTGSHAQHIISIDDHEMY 389 **************99999999********************************* PP AA1_2.hmm 192 ivevDGvdvepsevdslyiavaQRysvLvkakndts.knyalvakmdetmldvvp 245 ++ +DG++v+p++v+ + i +QR +vLv++++ + +++ l ++m + + +v 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 390 VIGADGTAVKPHRVHRVPIHNGQRHDVLVETNQGVDgDSFLLRSTMMTACFSFVD 444 *********************************955499**************** PP AA1_2.hmm 246 ddlqlnvtstlvydksaalaeas..........tvdelealdDfkleplekeell 290 + l++ + tl+y+ + + + +++++ldD +l p+ +++ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 445 PLLNPVANLTLRYKLPGSDVPSRppvphdwkdaMGSQCQDLDDSELIPAVYTSVP 499 *************8654433333233444343222777**********9986666 PP AA1_2.hmm 291 eepdke 296 ++ d + 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 500 PNHDIN 505 555543 PP == domain 2 score: 8.7 bits; conditional E-value: 0.00018 AA1_2.hmm 78 qvGtYWyHsHskgqYeDGlrgpliiedke.epyeydeel 115 G + +H+H + Gl +++ i++++ + e+d+e+ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 650 LPGVWAMHCHIAMHVAEGLMAAIAIHPQKiRELEFDQEV 688 578888***********************7888****97 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 239.3 0.0 1.2e-74 1.2e-74 10 294 .. 148 459 .. 141 476 .. 0.87 2 ! 3.2 0.0 0.0091 0.0091 109 144 .. 652 687 .. 636 702 .. 0.78 Alignments for each domain: == domain 1 score: 239.3 bits; conditional E-value: 1.2e-74 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkk 64 t ++re+++++t apDG+ k+ +lvngq P+p+ie + GDtl v+v+n l+ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 148 TPQIREHDWTITYGPSAPDGFLKKRILVNGQSPAPLIEVNEGDTLIVKVTNLLD- 201 6689**********************************************9886. PP AA1_3.hmm 65 nGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGtswYHsHys 118 +GtsiHwHG+ q+nt +DG++g +qCpi+pg + tY+f+++ qyG+ w HsH 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 202 EGTSIHWHGMFQNNTPFMDGIAGFSQCPIPPGGHLTYRFKIEgQYGSYWVHSHSK 256 9***************************************9769*********** PP AA1_3.hmm 119 lQyadGvlGplvinG...Pasa..nydvdlgpllltdwshesafelveeae.... 164 +Qy+dG++G+l+++ P ++ +yd +++l++d +h+ a+ +v++ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 257 MQYTDGLYGGLIVHSkndPYQKcrDYDD-ERVFLFADNYHDFADYIVKQLLsaqg 310 *************973335444115553.4778889****999999998876666 PP AA1_3.hmm 165 ..asggppvadniLingknkvkkskk.............eeegeysevklekgkk 204 ++++p+ +++Ling +++++ + e+ + ++ +e++kk 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 311 ynGTAAAPSPQSGLINGAGQFDCAALarargkqpgmptrCEQLPTPTMDIEPNKK 365 655667799**************77699*******998767788889******** PP AA1_3.hmm 205 yrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydvivea 259 yr+r+int+++++ +sid+H++ vi aD +++p +++ + i+ gqR dv+ve+ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 366 YRFRFINTGSHAQHIISIDDHEMYVIGADGTAVKPHRVHRVPIHNGQRHDVLVET 420 ******************************************************* PP AA1_3.hmm 260 nqe..eenywlraelaeaCskln..aeekeikailrYee 294 nq +++ lr+++ +aC ++ ++ ++ lrY+ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 421 NQGvdGDSFLLRSTMMTACFSFVdpLLNPVANLTLRYKL 459 **98899************99742244444555566655 PP == domain 2 score: 3.2 bits; conditional E-value: 0.0091 AA1_3.hmm 109 GtswYHsHyslQyadGvlGplvinGPasanydvdlg 144 G H H+++ a+G++ ++ i+ + + + d + 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 652 GVWAMHCHIAMHVAEGLMAAIAIHPQKIRELEFDQE 687 66668*******************876655555544 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 218.7 0.0 2e-68 2e-68 2 269 .. 164 458 .. 163 501 .. 0.86 Alignments for each domain: == domain 1 score: 218.7 bits; conditional E-value: 2e-68 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfq 56 +pDGf ++ +lvng+ p+pli ++gd++ ++v+n L++ tsihwhg+fq 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 164 APDGFLKKRILVNGQSPAPLIEVNEGDTLIVKVTNLLDE-----GTSIHWHGMFQ 213 69*********************************9975.....79********* PP AA1_1.hmm 57 kgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglrGalv 111 ++t ++dg a +qCPi pg +y+fk+++q G++w Hsh ++qy dgl G l+ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 214 NNTPFMDGIAGFSQCPIPPGGHLTYRFKIEGQYGSYWVHSHSKMQYTDGLYGGLI 268 ******************************************************* PP AA1_1.hmm 112 vydpedplkslydvddestvitladwyhtaakell............klvavads 154 v+ ++dp+++ d dde v+ +ad yh a + ++++ ++s 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 269 VHSKNDPYQKCRDYDDER-VFLFADNYHDFADYIVkqllsaqgyngtAAAPSPQS 322 ***************986.8899********99888899999999887889**** PP AA1_1.hmm 155 tlinGlgryagg................peaelavvnvekgkrYrfrlvsiscdp 193 +linG g++ ++ + ++++e +k+Yrfr++++ +++ 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 323 GLINGAGQFDCAalarargkqpgmptrcEQLPTPTMDIEPNKKYRFRFINTGSHA 377 ********996556777888999988777888999******************** PP AA1_1.hmm 194 nftfsidghnltvieadgvntkpltvdsiqifagqrysvvleanqevd..nYwir 246 ++ +sid+h++ vi adg+ +kp+ v+++ i gqr+ v++e+nq vd + +r 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 378 QHIISIDDHEMYVIGADGTAVKPHRVHRVPIHNGQRHDVLVETNQGVDgdSFLLR 432 *********************************************9974367888 PP AA1_1.hmm 247 anpnlgk...ntgfegginsailryk 269 +++ ++ + + + + lryk 6074|Psehu1_GeneCatalog_proteins_20130926.aa.fasta|AA1 433 STMMTACfsfVDPLLNPVANLTLRYK 458 87776654444444445555556665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (706 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 121.18 // Query: UTT96969.1|AA1 [L=700] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.5e-109 352.8 0.0 8.8e-109 352.3 0.0 1.1 1 AA1.hmm 1.6e-83 268.5 0.0 8.4e-82 262.9 0.0 2.1 2 AA1_2.hmm 1.5e-78 252.2 0.0 1e-77 249.5 0.0 1.9 2 AA1_3.hmm 8.9e-69 219.9 0.0 1.5e-68 219.2 0.0 1.4 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 352.3 0.0 8.8e-109 8.8e-109 9 357 .. 168 660 .. 159 661 .. 0.77 Alignments for each domain: == domain 1 score: 352.3 bits; conditional E-value: 8.8e-109 AA1.hmm 9 rsvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGl 103 ++ il+Ngq PgP+iea+egDt+vv+V+N+l ++gt+iHwhG++q+ t+++DG ag +qcpi++g ++tY+f++++q+G+yw+HsH+++qy+dGl UTT96969.1|AA1 168 KKRILINGQSPGPLIEASEGDTIVVKVKNRL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGELTYRFKIEGQYGSYWWHSHSKMQYTDGL 261 6789**************************9.79************************************************************* PP AA1.hmm 104 rGaliirdpkske......kydvddeelvillsdwyhktaeell.......kenatgaepapdsllinGkgrlync...........s.....sk 169 +G liir++ ++ +yd +e+v+l++d+yh+ a++++ n ++a+p p+s+linGkg+++ c + ++ UTT96969.1|AA1 262 YGGLIIRSK--DDpyqkcrDYD---DEKVFLFADNYHDFADDIVnqllsvkGYNGSSAAPSPQSGLINGKGQFN-CaglarakgkqpGmpskcTQ 350 *******75..23234445566...677****************99998864457889999***********86.54666666555414545533 PP AA1.hmm 170 le..vlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa..gnywiraslds...a...afd 254 l ++++epgk+yr+r+in++++a+ +sid+H+++vi Dg++vkp +v+ + ia Gqr dvl++++ + +++++r ++++ + ++ UTT96969.1|AA1 351 LPtpTMDIEPGKKYRFRFINTGSHAQHIISIDDHEMEVIGSDGTPVKPHKVHRIPIANGQRHDVLVNTTVGKngDSFLLRSTMMTacfSfvdPLL 445 33459**************************************************************77766667******88886662556556 PP AA1.hmm 255 nttalailrYkgassas.........................................................................nvsfv 276 + a +l+Yk+ s+ + ++ UTT96969.1|AA1 446 DPVANLTLQYKRPGSQVrprppkphdwmdtmgtlckdlddselvpaidtsvpanlnpnslgifnsqfgnlvlangstlgrffidnithtnY--VN 538 6777889***884332255666667777777777888877888888877777777777777777777777777777766666664442210..12 PP AA1.hmm 277 epstslleaysgvdetkaklkln............................hp..lhghdfvvv........nfd.............aedeakr 320 +p ++l a +++ n hp lhg d++++ + + +++ +r UTT96969.1|AA1 539 KPYLELARAGQQI---------NsstvasllvpddvwvadiiinnqdnfldHPfhLHGTDMHIIargtgnltQ-EgwsklnqqpgalnLHNPLRR 623 2222222222222.........02233333344445555555667777888*************887765441.14443333344444455555* PP AA1.hmm 321 dtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 dtv+v +++w+v r++ad pgvw+lhchi++H++ Gl UTT96969.1|AA1 624 DTVSVTRSSWIVARIKADLPGVWPLHCHIAMHVAEGL 660 ************************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 262.9 0.0 8.4e-82 8.4e-82 2 292 .. 168 499 .. 167 543 .. 0.89 2 ! 3.4 0.0 0.0072 0.0072 79 113 .. 643 678 .. 629 682 .. 0.84 Alignments for each domain: == domain 1 score: 262.9 bits; conditional E-value: 8.4e-82 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGl 96 ++ i +Ngq P p ie+++gd+++vk++N+l d+ ts+H+HG+fqn+t mDG ++ +qCpip g +ltY+f++e q+G+YW+HsHsk qY+DGl UTT96969.1|AA1 168 KKRILINGQSPGPLIEASEGDTIVVKVKNRL-DQGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGELTYRFKIEGQYGSYWWHSHSKMQYTDGL 261 56799**************************.99************************************************************* PP AA1_2.hmm 97 rgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.........................netenatl 160 g lii+ k++py +yd+e ++ +d Yh+ +++v+++ls+ yn + a p p+s l+ + + t+ UTT96969.1|AA1 262 YGGLIIRSKDDPYqkcrDYDDEKVFLFADNYHDFADDIVNQLLSVkgYNGSSAAPSPQSGLIngkgqfncaglarakgkqpgmpskcTQLPTPTM 356 ************999999***********************99987899999********************************998888999** PP AA1_2.hmm 161 evepgktYllriinvgafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndts.knyalvakmdetmldvvpddlqlnvts 254 ++epgk+Y++r+in+g a++ ++++dhem+++ DG+ v+p++v+ + ia +QR +vLv++ ++ +++ l ++m + + +v + l++ + UTT96969.1|AA1 357 DIEPGKKYRFRFINTGSHAQHIISIDDHEMEVIGSDGTPVKPHKVHRIPIANGQRHDVLVNTTVGKNgDSFLLRSTMMTACFSFVDPLLDPVANL 451 *************************************************************998755499************************* PP AA1_2.hmm 255 tlvydksaalaeas......tvdel....ealdDfkleplekeellee 292 tl+y++ ++ ++ +d++ ++ldD +l+p+ ++++ ++ UTT96969.1|AA1 452 TLQYKRPGSQVRPRppkphdWMDTMgtlcKDLDDSELVPAIDTSVPAN 499 ****987666555444556644444555799********988665544 PP == domain 2 score: 3.4 bits; conditional E-value: 0.0072 AA1_2.hmm 79 vGtYWyHsHskgqYeDGlrgpliiedke.epyeyde 113 G + +H+H + Gl +++ i++k+ ++ ++ + UTT96969.1|AA1 643 PGVWPLHCHIAMHVAEGLMAAVAIHPKKiQQLKFSQ 678 678889********************9966667766 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 249.5 0.0 1e-77 1e-77 10 279 .. 146 440 .. 141 470 .. 0.89 2 ? -0.0 0.0 0.088 0.088 109 133 .. 644 668 .. 628 680 .. 0.82 Alignments for each domain: == domain 1 score: 249.5 bits; conditional E-value: 1e-77 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr 104 t +tre+++++t apDG+ k+ +l+ngq Pgp+iea+ GDt++v+vkn+l+ +GtsiHwHG+ q++t +DG++g +qCpi+ g + tY+f+ UTT96969.1|AA1 146 TPRTREFDWTLTYGPSAPDGFVKKRILINGQSPGPLIEASEGDTIVVKVKNRLD-QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGELTYRFK 239 5689************************************************97.8*************************************** PP AA1_3.hmm 105 at.qyGtswYHsHyslQyadGvlGplvinG...Pasanydvd.lgpllltdwshesafelveeae......asggppvadniLingknkvkkskk 188 ++ qyG+ w+HsH +Qy+dG++G+l+i+ P ++ d+d +++l++d +h+ a+++v++ s+++p+ +++Lingk+++++ UTT96969.1|AA1 240 IEgQYGSYWWHSHSKMQYTDGLYGGLIIRSkddPYQKCRDYDdEKVFLFADNYHDFADDIVNQLLsvkgynGSSAAPSPQSGLINGKGQFNCAGL 334 9769************************8633365554444414778889*********9999887767655667799**************877 PP AA1_3.hmm 189 .............eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqe..eenywl 268 ++ + ++ +e+gkkyr+r+int+++++ +sid+H+++vi +D p++p +++ + i+ gqR dv+v+++ +++ l UTT96969.1|AA1 335 arakgkqpgmpskCTQLPTPTMDIEPGKKYRFRFINTGSHAQHIISIDDHEMEVIGSDGTPVKPHKVHRIPIANGQRHDVLVNTTVGknGDSFLL 429 999*****9998767788889*************************************************************998665699**** PP AA1_3.hmm 269 raelaeaCskl 279 r+++ +aC ++ UTT96969.1|AA1 430 RSTMMTACFSF 440 ********986 PP == domain 2 score: -0.0 bits; conditional E-value: 0.088 AA1_3.hmm 109 GtswYHsHyslQyadGvlGplvinG 133 G H H+++ a+G++ ++ i+ UTT96969.1|AA1 644 GVWPLHCHIAMHVAEGLMAAVAIHP 668 66667*****************994 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 219.2 0.0 1.5e-68 1.5e-68 2 251 .. 162 435 .. 161 499 .. 0.87 Alignments for each domain: == domain 1 score: 219.2 bits; conditional E-value: 1.5e-68 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHs 96 +pDGf ++ +l+ng+ pgpli +++gd++ ++v+n+L+ + tsihwhg+fq++t ++dg a +qCPi +g +y+fk+++q G++w+Hs UTT96969.1|AA1 162 APDGFVKKRILINGQSPGPLIEASEGDTIVVKVKNRLD-----QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGELTYRFKIEGQYGSYWWHS 251 69*********************************996.....689************************************************* PP AA1_1.hmm 97 hlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgryagg............. 166 h ++qy dgl G l++ ++dp+++ d dde+ v+ +ad yh a ++ ++++ ++s+linG+g+++ UTT96969.1|AA1 252 HSKMQYTDGLYGGLIIRSKDDPYQKCRDYDDEK-VFLFADNYHDFADDIVnqllsvkgyngsSAAPSPQSGLINGKGQFNCAglarakgkqpgmp 345 ******************************986.8899*********9988999999999888889*************9555778888999998 PP AA1_1.hmm 167 ...peaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifagqrysvvlean..qevdnYwiranpnl 251 ++ + ++++e gk+Yrfr++++ +++++ +sid+h+++vi dg+ +kp++v++i i gqr+ v++++ ++ d + +r+++ + UTT96969.1|AA1 346 skcTQLPTPTMDIEPGKKYRFRFINTGSHAQHIISIDDHEMEVIGSDGTPVKPHKVHRIPIANGQRHDVLVNTTvgKNGDSFLLRSTMMT 435 8888888999************************************************************99752256667777776655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (700 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 122.73 // Query: 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 [L=711] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.8e-107 348.0 0.5 2.7e-107 347.5 0.5 1.2 1 AA1.hmm 1.1e-81 262.5 0.0 1.9e-79 255.2 0.0 2.1 2 AA1_2.hmm 3e-79 254.4 0.1 3.2e-78 251.1 0.0 2.0 2 AA1_3.hmm 1.3e-69 222.6 0.0 2.7e-69 221.6 0.0 1.6 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 347.5 0.5 2.7e-107 2.7e-107 9 357 .. 174 673 .. 161 674 .. 0.77 Alignments for each domain: == domain 1 score: 347.5 bits; conditional E-value: 2.7e-107 AA1.hmm 9 rsvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaD 60 ++ ilvNgq PgP+ieanegDt+vv+V+N l ++gt+iHwhG++q+ t+++D 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 174 KKRILVNGQSPGPLIEANEGDTIVVKVRNLL-DQGTSIHWHGMFQNSTPFMD 224 6889**************************9.79****************** PP AA1.hmm 61 GvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdp 112 G ag +qcpi+p ++tY+f++++q+G+yw+HsH+++qy+dGl+G li++++ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 225 GIAGFSQCPIPPRGHLTYRFKIEGQYGSYWWHSHSKMQYTDGLYGGLIVHSK 276 **************************************************76 PP AA1.hmm 113 kske.....kydvddeelvillsdwyhktaeell.......kenatgaepap 152 ++ +yd +e v+l++d+yh+ a+ ++ n t a+p p 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 277 RD-PyqkcrDYD---DERVFLFADNYHDFADYIVqqllsanGYNGTAAAPSP 324 33.134445566...678***********9999988987654447888999* PP AA1.hmm 153 dsllinGkgrlync...........s.....skle..vlkvepgktyrlrli 186 +s+linG+g+++ c + ++l +++vep+k+yr+r+i 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 325 QSGLINGAGQFN-CaalahakgkqpGmptrcTQLPtpTMDVEPNKKYRFRFI 375 **********86.5477766655541555563333459************** PP AA1.hmm 187 naalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqs 238 n++++a+ +sidnH+l+vi+aDg++vkp +v+ + i+ Gqr dv++++nq 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 376 NTGSHAQHIISIDNHELEVIAADGTPVKPHKVHRVPIHNGQRHDVFVDTNQG 427 ***************************************************9 PP AA1.hmm 239 a..gnywiraslds...a...afdnttalailrYkg.....assas...... 271 + +++++r ++++ + ++ + a +l+Y+ a + 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 428 SdgDSFLLRSAMMTacfSfvdPLLDPVANLTLQYRLpgskiA---Pkrpvph 476 9877******888856625565566777889***66544441...1555666 PP AA1.hmm 272 .................................................... 271 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 477 dwkdamgsqcqdlkdselvpaidtsvppnhnlgslgifnsqfgnlqlangtt 528 6666677777777777778877777777777777777766666666666555 PP AA1.hmm 272 ..........nvsfvepstsllea.ysgvdetkaklkln............. 299 + t+++++ y 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 529 lgrffvdnvtQ-------TNYVNKpY------------Levthaggqinsst 561 54444432221.......22222222............02222233333334 PP AA1.hmm 300 .........................hp..lhghdfvvv.........nfd.. 313 hp lh d+++v + 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 562 vasllipddvwvadivinnedsfldHPfhLHATDMHIVargsgsmtqA-Qwi 612 4444555555555666778888999*************9888766540.155 PP AA1.hmm 314 ....aedeak.................rdtvavpkggwvvirfvadnpgvwl 344 + rdt++vp+++ vv+r++ d pgvw+ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 613 alnqN----AqpqngnasalnlknplrRDTITVPRSSFVVVRIIPDLPGVWA 660 44331....023345556666777777************************* PP AA1.hmm 345 lhchieaHlsmGl 357 +hchi++H++ Gl 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 661 MHCHIAMHVAEGL 673 ************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 255.2 0.0 1.9e-79 1.9e-79 3 289 .. 175 502 .. 173 534 .. 0.91 2 ! 5.2 0.0 0.002 0.002 75 115 .. 652 693 .. 639 698 .. 0.82 Alignments for each domain: == domain 1 score: 255.2 bits; conditional E-value: 1.9e-79 AA1_2.hmm 3 rvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 + i vNgq P p ie+n+gd+++vk+ N l d+ ts+H+HG+fqn+t mDG 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 175 KRILVNGQSPGPLIEANEGDTIVVKVRNLL-DQGTSIHWHGMFQNSTPFMDG 225 6799*************************9.99******************* PP AA1_2.hmm 55 asmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedke 106 ++ +qCpipp+ +ltY+f++e q+G+YW+HsHsk qY+DGl g li++ k+ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 226 IAGFSQCPIPPRGHLTYRFKIEGQYGSYWWHSHSKMQYTDGLYGGLIVHSKR 277 **************************************************** PP AA1_2.hmm 107 epy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv 152 +py +yd+e ++ +d Yh+ + +v+++ls yn t+a p p+s l+ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 278 DPYqkcrDYDDERVFLFADNYHDFADYIVQQLLSAngYNGTAAAPSPQSGLI 329 **999999***********************9988789************** PP AA1_2.hmm 153 .........................netenatlevepgktYllriinvgafa 179 + + t++vep+k+Y++r+in+g a 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 330 ngagqfncaalahakgkqpgmptrcTQLPTPTMDVEPNKKYRFRFINTGSHA 381 ***********************99889999********************* PP AA1_2.hmm 180 sqylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndts.kny 230 ++ +++++he++++ +DG+ v+p++v+ + i +QR +v+v +++ ++ +++ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 382 QHIISIDNHELEVIAADGTPVKPHKVHRVPIHNGQRHDVFVDTNQGSDgDSF 433 ********************************************9866599* PP AA1_2.hmm 231 alvakmdetmldvvpddlqlnvtstlvydksaalaeas..........tvde 272 l ++m + + +v + l++ + tl+y ++ +++ + ++ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 434 LLRSAMMTACFSFVDPLLDPVANLTLQYRLPGSKIAPKrpvphdwkdaMGSQ 485 **************************99865555444433334333222255 PP AA1_2.hmm 273 lealdDfkleplekeel 289 +++l D +l+p+ ++++ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 486 CQDLKDSELVPAIDTSV 502 57788888888776444 PP == domain 2 score: 5.2 bits; conditional E-value: 0.002 AA1_2.hmm 75 veeqvGtYWyHsHskgqYeDGlrgpliiedke.epyeydeel 115 +++ G + +H+H + Gl +++ i++++ + ++ +e+ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 652 IPDLPGVWAMHCHIAMHVAEGLMAAIAIHPHKiRELKFSQEV 693 566789999*********************997777998886 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 251.1 0.0 3.2e-78 3.2e-78 10 279 .. 152 446 .. 145 473 .. 0.90 2 ? 0.9 0.0 0.046 0.046 112 134 .. 660 682 .. 655 697 .. 0.84 Alignments for each domain: == domain 1 score: 251.1 bits; conditional E-value: 3.2e-78 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknn 61 t +tre+++++t + apDG+ k+ +lvngq Pgp+iea+ GDt++v+v+n 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 152 TPQTREFDWTITYGHSAPDGFLKKRILVNGQSPGPLIEANEGDTIVVKVRNL 203 6789**********************************************98 PP AA1_3.hmm 62 lkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGtsw 112 l+ +GtsiHwHG+ q++t +DG++g +qCpi+p + tY+f+++ qyG+ w 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 204 LD-QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPPRGHLTYRFKIEgQYGSYW 254 86.8***************************************9769***** PP AA1_3.hmm 113 YHsHyslQyadGvlGplvinG...Pasa..nydvdlgpllltdwshesafel 159 +HsH +Qy+dG++G+l+++ P ++ +yd +++l++d +h+ a+ + 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 255 WHSHSKMQYTDGLYGGLIVHSkrdPYQKcrDYDD-ERVFLFADNYHDFADYI 305 *******************973335444115553.4778889*****99999 PP AA1_3.hmm 160 veeae......asggppvadniLingknkvkkskk.............eeeg 192 v++ ++++p+ +++Ling +++++ + ++ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 306 VQQLLsangynGTAAAPSPQSGLINGAGQFNCAALahakgkqpgmptrCTQL 357 999887666655667799**************776999*****999877788 PP AA1_3.hmm 193 eysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepyttds 244 + ++ +e++kkyr+r+int+++++ +sid+H+l+viaaD p++p +++ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 358 PTPTMDVEPNKKYRFRFINTGSHAQHIISIDNHELEVIAADGTPVKPHKVHR 409 8899************************************************ PP AA1_3.hmm 245 lligigqRydviveanqe..eenywlraelaeaCskl 279 + i+ gqR dv v++nq +++ lr+ + +aC ++ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 410 VPIHNGQRHDVFVDTNQGsdGDSFLLRSAMMTACFSF 446 *****************98899************875 PP == domain 2 score: 0.9 bits; conditional E-value: 0.046 AA1_3.hmm 112 wYHsHyslQyadGvlGplvinGP 134 H H+++ a+G++ ++ i+ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 660 AMHCHIAMHVAEGLMAAIAIHPH 682 57******************955 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 221.6 0.0 2.7e-69 2.7e-69 2 250 .. 168 440 .. 167 505 .. 0.88 2 ? -3.7 0.0 1.1 1.1 77 112 .. 644 679 .. 640 682 .. 0.79 Alignments for each domain: == domain 1 score: 221.6 bits; conditional E-value: 2.7e-69 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 +pDGf ++ +lvng+ pgpli +++gd++ ++v n L+ + tsihwhg 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 168 APDGFLKKRILVNGQSPGPLIEANEGDTIVVKVRNLLD-----QGTSIHWHG 214 69********************************9986.....589****** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdg 105 +fq++t ++dg a +qCPi p +y+fk+++q G++w+Hsh ++qy dg 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 215 MFQNSTPFMDGIAGFSQCPIPPRGHLTYRFKIEGQYGSYWWHSHSKMQYTDG 266 **************************************************** PP AA1_1.hmm 106 lrGalvvydpedplkslydvddestvitladwyhtaakell........... 146 l G l+v+ ++dp+++ d dde v+ +ad yh a + 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 267 LYGGLIVHSKRDPYQKCRDYDDER-VFLFADNYHDFADYIVqqllsangyng 317 *********************986.8899********998888999999998 PP AA1_1.hmm 147 .klvavadstlinGlgryagg................peaelavvnvekgkr 181 ++++ ++s+linG g+++ ++ + +++ve +k+ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 318 tAAAPSPQSGLINGAGQFNCAalahakgkqpgmptrcTQLPTPTMDVEPNKK 369 87889*************96667778889999988888888999******** PP AA1_1.hmm 182 Yrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifagqrysvv 233 Yrfr++++ +++++ +sid+h+l+vi adg+ +kp++v+++ i gqr+ v 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 370 YRFRFINTGSHAQHIISIDNHELEVIAADGTPVKPHKVHRVPIHNGQRHDVF 421 **************************************************** PP AA1_1.hmm 234 leanqevd..nYwiranpn 250 +++nq d + +r+++ 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 422 VDTNQGSDgdSFLLRSAMM 440 *****76422566666655 PP == domain 2 score: -3.7 bits; conditional E-value: 1.1 AA1_1.hmm 77 nsflydfkvpdqaGtfwYHshlstqycdglrGalvv 112 +sf+ +pd G + H h+++ +gl a+ + 13036|Ustma2_2_GeneCatalog_proteins_20171205.aa.fasta|AA1 644 SSFVVVRIIPDLPGVWAMHCHIAMHVAEGLMAAIAI 679 566665667888899999*******99999988876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (711 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 111.20 // Query: 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 [L=734] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-105 340.7 0.8 4.2e-105 340.2 0.8 1.1 1 AA1.hmm 1.3e-80 258.9 0.0 8.2e-78 249.8 0.0 2.2 2 AA1_2.hmm 2.1e-76 245.1 0.1 2.1e-75 241.8 0.0 2.0 2 AA1_3.hmm 5.1e-67 214.1 0.0 1.1e-66 213.0 0.0 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 340.2 0.8 4.2e-105 4.2e-105 9 357 .. 197 696 .. 186 697 .. 0.77 Alignments for each domain: == domain 1 score: 340.2 bits; conditional E-value: 4.2e-105 AA1.hmm 9 rsvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGva 63 ++ il+Ngq PgP+i anegDt+vv+V+N l ++gt+iHwhG++q+ t+++DG a 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 197 KKRILINGQSPGPLIDANEGDTIVVKVRNFL-DQGTSIHWHGMFQNSTPFMDGIA 250 6789**************************9.79********************* PP AA1.hmm 64 gvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpkske.. 116 g +qcpi++g ++tY+f++++q+G+ywyHsH+++q +dGl+G l+++++ ++ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 251 GFSQCPIPAGGHLTYRFKIEGQYGSYWYHSHSKMQLTDGLYGGLVVHSK--NDpy 303 ***********************************************75..3334 PP AA1.hmm 117 ....kydvddeelvillsdwyhktaeell.......kenatgaepapdsllinGk 160 +yd +e v+l++d+yh+ a+ ++ n + a+p p+s+linG+ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 304 rkcrDYD---DERVFLFNDNYHDFADYIVdqllsaqGYNGSAAAPSPQSGLINGA 355 5545566...678***********9999999997643336778888********* PP AA1.hmm 161 grlync...........s.....skle..vlkvepgktyrlrlinaalnaeltfs 197 g++ c + ++l ++++ep+k+yr+r+in++++a+ +s 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 356 GQFD-CaavkraktpqpGmptkcTQLGtpTMDIEPNKKYRFRFINVGSHAQHIIS 409 **75.5577666655541454452322449************************* PP AA1.hmm 198 idnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa..gnywiraslds 250 idnH++ vi aDg++vkp +v+ + i+ Gqr dvl+++n + +++++r s+++ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 410 IDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNVGKegDSFLLRSSMMT 464 **************************************9988877******7777 PP AA1.hmm 251 ...a...afdnttalailrYkg...assas......................... 271 a ++ + a +l+Yk+ + 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 465 scfAfvdPLLDPVANLTLQYKRpgsN---Vrprppvphdwkhkmgsqcqdlkdse 516 57625565566777889***885440...24455565666666666677777777 PP AA1.hmm 272 .............................................nvsf.vepst 280 ++++ ++p + 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 517 lipaidtsispnhnprslgifnsqfgnlqlangttlgrffidnvtQTNYvNKPYL 571 7777777777777777777776666666666666655555553331111122222 PP AA1.hmm 281 slleaysgvdetkaklkln...................................h 300 +l h 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 572 EL----------------ThagqqinsstiaslvvpddlwvadfiinnedtfldH 610 22................022233333344444455556666666777788888* PP AA1.hmm 301 p..lhghdfvvv.....nfd.....aedeak.....................rdt 322 p lhg d+++v n++ a rdt 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 611 PfhLHGTDMHIVargsgNMTqaqwlA----LnangqpqgvnatglnlvnplrRDT 661 ************77655222333440....0444455677888888888898*** PP AA1.hmm 323 vavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 ++v ++++vv+r++ad pg+w++hchi++H++ Gl 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 662 ITVTRSSYVVVRINADLPGTWPMHCHIAMHVAEGL 696 **********************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 249.8 0.0 8.2e-78 8.2e-78 3 291 .. 198 527 .. 196 566 .. 0.90 2 ! 7.0 0.0 0.00056 0.00056 77 114 .. 677 715 .. 662 719 .. 0.82 Alignments for each domain: == domain 1 score: 249.8 bits; conditional E-value: 8.2e-78 AA1_2.hmm 3 rvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasm 57 + i +Ngq P p i++n+gd+++vk+ N l d+ ts+H+HG+fqn+t mDG ++ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 198 KRILINGQSPGPLIDANEGDTIVVKVRNFL-DQGTSIHWHGMFQNSTPFMDGIAG 251 6799**************************.99********************** PP AA1_2.hmm 58 vtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeepy... 109 +qCpip g +ltY+f++e q+G+YWyHsHsk q +DGl g l+++ k++py 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 252 FSQCPIPAGGHLTYRFKIEGQYGSYWYHSHSKMQLTDGLYGGLVVHSKNDPYrkc 306 ****************************************************999 PP AA1_2.hmm 110 .eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv......... 152 +yd+e ++ d Yh+ + +v+++ls yn ++a p p+s l+ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 307 rDYDDERVFLFNDNYHDFADYIVDQLLSAqgYNGSAAAPSPQSGLIngagqfdca 361 9************************99987899999******************* PP AA1_2.hmm 153 ................netenatlevepgktYllriinvgafasqylvledhemt 191 + + t+++ep+k+Y++r+invg a++ +++++hem+ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 362 avkraktpqpgmptkcTQLGTPTMDIEPNKKYRFRFINVGSHAQHIISIDNHEMH 416 *************988888899********************************* PP AA1_2.hmm 192 ivevDGvdvepsevdslyiavaQRysvLvkakndts.knyalvakmdetmldvvp 245 ++ +DG+ v+p++v+ + i +QR +vLv ++ ++ +++ l ++m ++ + +v 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 417 VIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNVGKEgDSFLLRSSMMTSCFAFVD 471 ********************************9755499**************** PP AA1_2.hmm 246 ddlqlnvtstlvydksaalaeas..........tvdelealdDfkleplekeell 290 + l++ + tl+y++ ++ ++ + +++++l D +l p+ ++++ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 472 PLLDPVANLTLQYKRPGSNVRPRppvphdwkhkMGSQCQDLKDSELIPAIDTSIS 526 *************987666555544333332222255567777777776665544 PP AA1_2.hmm 291 e 291 + 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 527 P 527 4 PP == domain 2 score: 7.0 bits; conditional E-value: 0.00056 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.epyeydee 114 + Gt+ +H+H + Gl +++ i++k+ ++ + +e 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 677 DLPGTWPMHCHIAMHVAEGLMAVVAIHPKKiQQLPFSQE 715 568*************************99666677766 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 241.8 0.0 2.1e-75 2.1e-75 10 279 .. 175 469 .. 169 505 .. 0.89 2 ? 0.8 0.0 0.051 0.051 102 132 .. 673 703 .. 661 716 .. 0.82 Alignments for each domain: == domain 1 score: 241.8 bits; conditional E-value: 2.1e-75 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkk 64 t +tr++++++t + apDG+ k+ +l+ngq Pgp+i a+ GDt++v+v+n l+ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 175 TPRTRHFDWTLTYGQSAPDGFLKKRILINGQSPGPLIDANEGDTIVVKVRNFLD- 228 6689***********************************************886. PP AA1_3.hmm 65 nGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGtswYHsHys 118 +GtsiHwHG+ q++t +DG++g +qCpi+ g + tY+f+++ qyG+ wYHsH 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 229 QGTSIHWHGMFQNSTPFMDGIAGFSQCPIPAGGHLTYRFKIEgQYGSYWYHSHSK 283 8***************************************9769*********** PP AA1_3.hmm 119 lQyadGvlGplvinG...P..asanydvdlgpllltdwshesafelveeae.... 164 +Q +dG++G+lv++ P + +yd +++l++d +h+ a+ +v++ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 284 MQLTDGLYGGLVVHSkndPyrKCRDYDD-ERVFLFNDNYHDFADYIVDQLLsaqg 337 *************972224223356653.4788899*****99999998876666 PP AA1_3.hmm 165 ..asggppvadniLingknkvkkskk.............eeegeysevklekgkk 204 s+++p+ +++Ling +++++ + ++ + ++ +e++kk 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 338 ynGSAAAPSPQSGLINGAGQFDCAAVkraktpqpgmptkCTQLGTPTMDIEPNKK 392 555566799**************776999******998766778889******** PP AA1_3.hmm 205 yrlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydvivea 259 yr+r+in++++++ +sid+H+++vi aD p++p +++ + i+ gqR dv+v++ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 393 YRFRFINVGSHAQHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDT 447 ******************************************************* PP AA1_3.hmm 260 nqe..eenywlraelaeaCskl 279 n +++ lr+++ ++C ++ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 448 NVGkeGDSFLLRSSMMTSCFAF 469 9776699************986 PP == domain 2 score: 0.8 bits; conditional E-value: 0.051 AA1_3.hmm 102 efratqyGtswYHsHyslQyadGvlGplvin 132 + +a+ Gt H H+++ a+G++ + i+ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 673 RINADLPGTWPMHCHIAMHVAEGLMAVVAIH 703 566777799999**************99998 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 213.0 0.0 1.1e-66 1.1e-66 2 247 .. 191 460 .. 190 486 .. 0.91 Alignments for each domain: == domain 1 score: 213.0 bits; conditional E-value: 1.1e-66 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfq 56 +pDGf ++ +l+ng+ pgpli +++gd++ ++v n L+ + tsihwhg+fq 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 191 APDGFLKKRILINGQSPGPLIDANEGDTIVVKVRNFLD-----QGTSIHWHGMFQ 240 69********************************9986.....689********* PP AA1_1.hmm 57 kgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglrGalv 111 ++t ++dg a +qCPi +g +y+fk+++q G++wYHsh ++q dgl G lv 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 241 NSTPFMDGIAGFSQCPIPAGGHLTYRFKIEGQYGSYWYHSHSKMQLTDGLYGGLV 295 ******************************************************* PP AA1_1.hmm 112 vydpedplkslydvddestvitladwyhtaakell............klvavads 154 v+ ++dp+++ d dde v+ + d yh a + ++++ ++s 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 296 VHSKNDPYRKCRDYDDER-VFLFNDNYHDFADYIVdqllsaqgyngsAAAPSPQS 349 ***************986.8899********99988999999999888889**** PP AA1_1.hmm 155 tlinGlgryagg................peaelavvnvekgkrYrfrlvsiscdp 193 +linG g++ ++ ++++e +k+Yrfr++++ +++ 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 350 GLINGAGQFDCAavkraktpqpgmptkcTQLGTPTMDIEPNKKYRFRFINVGSHA 404 ********9865566777888787665555567789******************* PP AA1_1.hmm 194 nftfsidghnltvieadgvntkpltvdsiqifagqrysvvlean..qevdnYwir 246 ++ +sid+h+++vi adg+ +kp++v++i i gqr+ v++++n +e d + +r 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 405 QHIISIDNHEMHVIGADGTPVKPHKVHRIPIHNGQRHDVLVDTNvgKEGDSFLLR 459 *****************************************99833445556666 PP AA1_1.hmm 247 a 247 + 3539|Spore1_GeneCatalog_proteins_20131031.aa.fasta|AA1 460 S 460 5 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (734 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 122.41 // [ok]