# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA1/fasta_for_each_cluster/cluster_58.txt # target HMM database: merged_hmms/AA1.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA1/AA1_cluster_58.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 [L=644] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-103 335.5 0.1 1.5e-103 335.1 0.1 1.1 1 AA1.hmm 6.2e-77 246.9 0.3 1.2e-76 245.9 0.1 1.5 2 AA1_3.hmm 1.4e-74 239.1 0.1 1.4e-71 229.2 0.0 2.8 3 AA1_2.hmm 1.1e-72 232.8 0.0 4.9e-72 230.6 0.0 1.9 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 335.1 0.1 1.5e-103 1.5e-103 7 357 .. 71 614 .. 60 615 .. 0.84 Alignments for each domain: == domain 1 score: 335.1 bits; conditional E-value: 1.5e-103 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwa 59 + r+v+++N+q+PgP ieanegD+++vt+ Nkl ++++t HwhGl q+gtnw+ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 71 FWRPVLAINNQMPGPVIEANEGDHLEVTIINKL-KTPVTFHWHGLYQNGTNWE 122 6799****************************9.68***************** PP AA1.hmm 60 DGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdp 112 DG++g+tqcpi+pg ++tY+f +++q+Gt+wyH+H++ + dGl+G+lii++p 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 123 DGPSGITQCPIPPGVTYTYKFALDGQYGTFWYHAHHENLKGDGLVGPLIIHSP 175 ***************************************************99 PP AA1.hmm 113 kske....kydvddeelvillsdwyhktaeell......ken..atgaepapd 153 + + d+d +e+v++l+dwyh+ +++++ + + +p ++ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 176 R--DplklGIDFD-QEIVLVLADWYHTPSTQIIpqmlsnR-GyrGNVVAPSAN 224 4..3456788888.999****************8877541.22344556669* PP AA1.hmm 154 sllinGkgrlync......s....sklevlkvepgktyrlrlinaalnaeltf 196 s+linG+g+ +c + ++ +++v +g + r+rl+na+++ +++f 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 225 SALINGMGQW-DCryattgQrcrqTSPPEFNVVAGSRTRFRLVNAGSHVMFFF 276 ********96.565665541554555679************************ PP AA1.hmm 197 sidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywira 246 s dnH+l+v eaD ++v+ p+ ++ l + Gqry+v+++a ++ +++++ra 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 277 SADNHTLNVTEADSTPVRgPTGIQRLRFHGGQRYSVIITAAMNEvgSSFYLRA 329 *****************86899*****************77777667****** PP AA1.hmm 247 slds...a....afdnttalailrYkg............assas......... 271 ++d+ + ++ta+ai+r + + + 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 330 KMDTdcwVwvttD-IQNTAYAIVRVVApgrllsqppsgqK---Pttqdwaert 378 9999666155434.57788999999877888777666551...1556677777 PP AA1.hmm 272 ..................................................... 271 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 379 nnqcmdldpnslvpiipvrvpttvlgsgtianafgfqllstptgppvsfngsa 431 8889999********************************************** PP AA1.hmm 272 ..................................................... 271 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 432 sansgnttsrsmkrqlnveinntppplgnnrtspgvinntqlpptpprtgarf 484 ***************************************************** PP AA1.hmm 272 ...nvs.fvepstslleay.sgv........detka................. 294 n+s f +p++++l+++ + 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 485 fvnNISaFSTPQQPILHDFtA-GgpgvvnssN---Sasvvypklgwydlylvn 533 **9555379999999999642.2345564331...234566666666666665 PP AA1.hmm 295 .klklnhp..lhghdfvvv...............nfdaedeakrdtvavpkgg 329 ++ +nhp lhg ++++v ++++ ++ +rdtv+v+ g+ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 534 mDAGVNHPyhLHGPEMHLVafgqglptpenlrnlTYNTANPLRRDTVLVQGGS 586 566667*************777666666555444444777777********** PP AA1.hmm 330 wvvirfvadnpgvwllhchieaHlsmGl 357 vv+r+++d pgvw+lhch+ +Hl+ Gl 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 587 FVVVRINTDLPGVWFLHCHMGWHLAEGL 614 ***************************9 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 245.9 0.1 1.2e-76 1.2e-76 8 283 .. 49 342 .. 43 376 .. 0.87 2 ? -3.6 0.0 1.1 1.1 109 131 .. 598 620 .. 583 626 .. 0.76 Alignments for each domain: == domain 1 score: 245.9 bits; conditional E-value: 1.2e-76 AA1_3.hmm 8 pktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvkn 60 ++ +tr+y++ v+e+++apDG+ +++l++n+q+Pgp+iea+ GD+levt+ n 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 49 RSKRKTRRYSWVVHEANAAPDGFWRPVLAINNQMPGPVIEANEGDHLEVTIIN 101 56789************************************************ PP AA1_3.hmm 61 nlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGtsw 112 +lk+ +++HwHG+ q+ tn++DG +g+tqCpi+pg ++tY+f + qyGt w 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 102 KLKT-PVTFHWHGLYQNGTNWEDGPSGITQCPIPPGVTYTYKFALDgQYGTFW 153 **96.6789**********************************98669***** PP AA1_3.hmm 113 YHsHyslQyadGvlGplvinGPas...anydvdl.gpllltdwshesafelve 161 YH+H+ +dG++Gpl+i+ P d d +l+l+dw+h+ ++++ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 154 YHAHHENLKGDGLVGPLIIHSPRDplkLGIDFDQeIVLVLADWYHTPSTQIIP 206 ********************99642224555555246789***********99 PP AA1_3.hmm 162 eae......asggppvadniLingknkvkkskk.....eeegeysevklekgk 203 ++ + +p+a++ Ling+++++++ + ++++ e+++ +g 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 207 QMLsnrgyrGNVVAPSANSALINGMGQWDCRYAttgqrCRQTSPPEFNVVAGS 259 9986666544556699**************888666554556666799***** PP AA1_3.hmm 204 kyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydv 255 + r+rl+n++++ +f fs d+H+l+v +aD p++ p + l + gqRy v 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 260 RTRFRLVNAGSHVMFFFSADNHTLNVTEADSTPVRgPTGIQRLRFHGGQRYSV 312 **********************************858889************* PP AA1_3.hmm 256 iveanqe..eenywlraelaeaCsklnaee 283 i++a + ++++lra+++++C + +++ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 313 IITAAMNevGSSFYLRAKMDTDCWVWVTTD 342 ****9988899************8864333 PP == domain 2 score: -3.6 bits; conditional E-value: 1.1 AA1_3.hmm 109 GtswYHsHyslQyadGvlGplvi 131 G + H H a+G+ +v+ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 598 GVWFLHCHMGWHLAEGLSAVVVV 620 77788999999999998877766 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 229.2 0.0 1.4e-71 1.4e-71 2 254 .. 73 349 .. 72 388 .. 0.93 2 ? -0.0 0.0 0.08 0.08 151 196 .. 510 555 .. 485 584 .. 0.72 3 ! 5.8 0.0 0.0013 0.0013 75 106 .. 594 624 .. 579 631 .. 0.82 Alignments for each domain: == domain 1 score: 229.2 bits; conditional E-value: 1.4e-71 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 r+v+++N+q P p+ie+n+gd++ev++ N+l ++++++H+HGl+qngtn+ DG 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 73 RPVLAINNQMPGPVIEANEGDHLEVTIINKL-KTPVTFHWHGLYQNGTNWEDG 124 899****************************.789****************** PP AA1_2.hmm 55 asmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkee 107 +s++tqCpippg t+tY+f ++ q+Gt+WyH+H+++ DGl gplii+ +++ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 125 PSGITQCPIPPGVTYTYKFALDGQYGTFWYHAHHENLKGDGLVGPLIIHSPRD 177 ****************************************************9 PP AA1_2.hmm 108 py....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.. 152 p ++d+e++l+l+dwYh+ s++++ ++ls+ y+ + p +s+l+ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 178 PLklgiDFDQEIVLVLADWYHTPSTQIIPQMLSNrgYRGNVVAPSANSALIng 230 998899*************************99956677777888899999** PP AA1_2.hmm 153 ...............netenatlevepgktYllriinvgafasqylvledhem 190 +t+ +++v +g + ++r++n g ++++++ ++h++ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 231 mgqwdcryattgqrcRQTSPPEFNVVAGSRTRFRLVNAGSHVMFFFSADNHTL 283 *************99999999******************************** PP AA1_2.hmm 191 tivevDGvdve.psevdslyiavaQRysvLvkak.ndtsknyalvakmdetml 241 ++ e+D++ v+ p+ ++ l+ +QRysv+++a n+ +++ l akmd++ + 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 284 NVTEADSTPVRgPTGIQRLRFHGGQRYSVIITAAmNEVGSSFYLRAKMDTDCW 336 **********83566****************98715688*************9 PP AA1_2.hmm 242 dvvpddlqlnvts 254 v +d+q + + 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 337 VWVTTDIQNTAYA 349 9999998877655 PP == domain 2 score: -0.0 bits; conditional E-value: 0.08 AA1_2.hmm 151 lvnetenatlevepgktYllriinvgafasqylvledhemtivevD 196 +vn++++a++ + Y l ++n+ a +++ +l + em++v 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 510 VVNSSNSASVVYPKLGWYDLYLVNMDAGVNHPYHLHGPEMHLVAFG 555 346677777766777789**********************999864 PP == domain 3 score: 5.8 bits; conditional E-value: 0.0013 AA1_2.hmm 75 veeqvGtYWyHsHskgqYeDGlrgpliiedke 106 + + G + +H+H++ + Gl +++++++++ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 594 T-DLPGVWFLHCHMGWHLAEGLSAVVVVQPEK 624 4.66899*********************9987 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 230.6 0.0 4.9e-72 4.9e-72 2 270 .. 67 355 .. 66 400 .. 0.85 2 ? -0.7 0.0 0.14 0.14 85 113 .. 593 621 .. 581 626 .. 0.78 Alignments for each domain: == domain 1 score: 230.6 bits; conditional E-value: 4.9e-72 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhgl 54 +pDGf r + +n+++pgp+i +++gd+++++++n+L+ + hwhgl 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 67 APDGFWRPVLAINNQMPGPVIEANEGDHLEVTIINKLKT-----PVTFHWHGL 114 7***********************************975.....5789***** PP AA1_1.hmm 55 fqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglr 107 +q+gtnw+dgp+ +tqCPi pg +++y+f++++q GtfwYH+h+++ dgl 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 115 YQNGTNWEDGPSGITQCPIPPGVTYTYKFALDGQYGTFWYHAHHENLKGDGLV 167 ***************************************************** PP AA1_1.hmm 108 Galvvydpedplkslydvddestvitladwyhtaakell............kl 148 G+l+++ p+dplk d+d+e v+ ladwyht+++++ + 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 168 GPLIIHSPRDPLKLGIDFDQE-IVLVLADWYHTPSTQIIpqmlsnrgyrgnVV 219 ******************987.6999**********99989999999998666 PP AA1_1.hmm 149 vavadstlinGlgrya....gg....peaelavvnvekgkrYrfrlvsiscdp 193 ++ a+s+linG+g++ ++ +++ nv +g r rfrlv+ ++ 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 220 APSANSALINGMGQWDcryaTTgqrcRQTSPPEFNVVAGSRTRFRLVNAGSHV 272 6899*********876333222444455667789******************* PP AA1_1.hmm 194 nftfsidghnltvieadgvntk.pltvdsiqifagqrysvvlea..nqevdnY 243 f fs d+h+l+v ead++ ++ p+ +++++ gqrysv+++a n+ + + 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 273 MFFFSADNHTLNVTEADSTPVRgPTGIQRLRFHGGQRYSVIITAamNEVGSSF 325 *******************9754999****************9844455679* PP AA1_1.hmm 244 wiranpnlgk...ntgfegginsailrykg 270 ++ra++++ t+ +++ ai+r + 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 326 YLRAKMDTDCwvwVTTDIQNTAYAIVRVVA 355 ******998866544445566678888653 PP == domain 2 score: -0.7 bits; conditional E-value: 0.14 AA1_1.hmm 85 vpdqaGtfwYHshlstqycdglrGalvvy 113 +d G ++ H h+ +gl +vv 660183|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 593 NTDLPGVWFLHCHMGWHLAEGLSAVVVVQ 621 46778999**************9888875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (644 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 89.01 // Query: 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 [L=140] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-29 91.9 0.0 1.6e-29 91.7 0.0 1.0 1 AA1.hmm 2.7e-25 77.1 0.0 3.4e-25 76.8 0.0 1.1 1 AA1_1.hmm 3.4e-25 76.8 0.0 4e-25 76.6 0.0 1.0 1 AA1_2.hmm 2.5e-22 67.5 0.0 2.9e-22 67.3 0.0 1.0 1 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 91.7 0.0 1.6e-29 1.6e-29 100 212 .. 2 132 .. 1 137 [. 0.82 Alignments for each domain: == domain 1 score: 91.7 bits; conditional E-value: 1.6e-29 AA1.hmm 100 adGlrGaliirdpks..kekydvddeelvillsdwyhktaeell......ken 144 adG+ G+lii++p++ k++ d+d +e+v++l+dwyh+t+++++ ++ 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 2 ADGINGPLIIHSPRDplKRHTDFD-QEVVLVLADWYHNTSTDIVehmlsePGY 53 79*********9966544489998.899****************888754222 PP AA1.hmm 145 .atgaepapdsllinGkgrlync....s.......sklevlkvepgktyrlrl 185 t a+p p+s+linG g+ + c + ++ ++++e+g + r+rl 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 54 fGTPAAPGPNSALINGIGEWN-CsqatKseqckqiNSPPEFTFEAGGKIRFRL 105 46666777**********975.634440455556644569************* PP AA1.hmm 186 inaalnaeltfsidnHkltvieaDgvy 212 ina+++a++++s+d+H+l+v eaDg+ 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 106 INAGVHAMFFYSVDEHTLNVTEADGTG 132 *************************86 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 76.8 0.0 3.4e-25 3.4e-25 103 212 .. 2 131 .. 1 137 [. 0.84 Alignments for each domain: == domain 1 score: 76.8 bits; conditional E-value: 3.4e-25 AA1_1.hmm 103 cdglrGalvvydpedplkslydvddestvitladwyhtaakell......... 146 dg+ G+l+++ p+dplk+ d+d+e v+ ladwyh++++++ 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 2 ADGINGPLIIHSPRDPLKRHTDFDQE-VVLVLADWYHNTSTDIVehmlsepgy 53 69*********************987.6999**********999899999999 PP AA1_1.hmm 147 ...klvavadstlinGlgrya...ggpeaelavvn......vekgkrYrfrlv 187 +++ ++s+linG+g ++ ++++ + +n e+g + rfrl+ 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 54 fgtPAAPGPNSALINGIGEWNcsqATKSEQCKQINsppeftFEAGGKIRFRLI 106 98777799***********984323334445555422222278999******* PP AA1_1.hmm 188 siscdpnftfsidghnltvieadgv 212 + ++ f +s+d+h+l+v eadg+ 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 107 NAGVHAMFFYSVDEHTLNVTEADGT 131 ************************8 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 76.6 0.0 4e-25 4e-25 93 200 .. 2 133 .. 1 138 [. 0.93 Alignments for each domain: == domain 1 score: 76.6 bits; conditional E-value: 4e-25 AA1_2.hmm 93 eDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..yn 139 DG+ gplii+ +++p ++d+e++l+l+dwYh++s+++v+++ls+ y 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 2 ADGINGPLIIHSPRDPLkrhtDFDQEVVLVLADWYHNTSTDIVEHMLSEpgYF 54 6***********9977766779**************************98888 PP AA1_2.hmm 140 ptgaepipdsllv..................netenatlevepgktYllriin 174 t a p p+s+l+ + ++ ++++e+g + ++r+in 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 55 GTPAAPGPNSALIngigewncsqatkseqckQINSPPEFTFEAGGKIRFRLIN 107 999************************998877788899************** PP AA1_2.hmm 175 vgafasqylvledhemtivevDGvdv 200 g+ a+++ ++++h++++ e+DG+ + 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 108 AGVHAMFFYSVDEHTLNVTEADGTGI 133 ***********************865 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 67.3 0.0 2.9e-22 2.9e-22 122 237 .. 2 133 .. 1 138 [. 0.82 Alignments for each domain: == domain 1 score: 67.3 bits; conditional E-value: 2.9e-22 AA1_3.hmm 122 adGvlGplvinGP...asanydvdl.gpllltdwshesafelveeae...... 164 adG+ Gpl+i+ P + + d d +l+l+dw+h++ +++ve++ 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 2 ADGINGPLIIHSPrdpLKRHTDFDQeVVLVLADWYHNTSTDIVEHMLsepgyf 54 79*********99444234445555135789*************999777765 PP AA1_3.hmm 165 asggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrlin 211 + ++p ++ Ling +++++s++ ++ ++ e+++e+g k r+rlin 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 55 GTPAAPGPNSALINGIGEWNCSQAtkseqcKQINSPPEFTFEAGGKIRFRLIN 107 56667999*************998776655555566679************** PP AA1_3.hmm 212 tsvdstfkfsidgHkltviaaDfvpi 237 ++v+++f +s+d+H+l+v +aD i 499698|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 108 AGVHAMFFYSVDEHTLNVTEADGTGI 133 ********************996655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (140 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 77.43 // Query: 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 [L=130] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3e-37 116.5 0.1 3.6e-37 116.2 0.1 1.1 1 AA1_3.hmm 4.1e-37 116.6 0.3 5.5e-37 116.2 0.3 1.2 1 AA1.hmm 1.2e-28 88.1 0.0 1.6e-28 87.7 0.0 1.1 1 AA1_1.hmm 2.3e-28 87.2 0.1 3e-28 86.8 0.1 1.2 1 AA1_2.hmm Domain annotation for each model (and alignments): >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 116.2 0.1 3.6e-37 3.6e-37 6 105 .. 30 128 .. 25 130 .] 0.94 Alignments for each domain: == domain 1 score: 116.2 bits; conditional E-value: 3.6e-37 AA1_3.hmm 6 kvpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtv 58 +v ++ + r+y++ vt++t apDG+ +++l++n+q+Pgp+iea+ GD +evtv 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 30 EVSSKKTLRKYEWIVTNTTGAPDGFWRSVLAINNQMPGPLIEANEGDDVEVTV 82 55677889********************************************* PP AA1_3.hmm 59 knnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefra 105 n+l+ +iHwHG+ q+ tn++DG++++tqCpi+pg ++tY+f+ 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 83 INKLS-SPLTIHWHGLYQNGTNWEDGISAITQCPIPPGVTYTYKFTL 128 ****9.5688***********************************85 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 116.2 0.3 5.5e-37 5.5e-37 6 82 .. 48 128 .. 43 130 .] 0.92 Alignments for each domain: == domain 1 score: 116.2 bits; conditional E-value: 5.5e-37 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrq 53 + + rsv+++N+q+PgP+ieanegD v+vtV Nkl s ++tiHwhGl q 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 48 TgapdgFWRSVLAINNQMPGPLIEANEGDDVEVTVINKL-SSPLTIHWHGLYQ 99 455556789*****************************9.78*********** PP AA1.hmm 54 lgtnwaDGvagvtqcpiapgksftYeftv 82 +gtnw+DG + +tqcpi+pg ++tY+ft+ 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 100 NGTNWEDGISAITQCPIPPGVTYTYKFTL 128 ***************************97 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 87.7 0.0 1.6e-28 1.6e-28 2 85 .. 50 128 .. 50 130 .] 0.96 Alignments for each domain: == domain 1 score: 87.7 bits; conditional E-value: 1.6e-28 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhgl 54 +pDGf rs+ +n+++pgpli +++gd+++++v+n+L+ + +ihwhgl 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 50 APDGFWRSVLAINNQMPGPLIEANEGDDVEVTVINKLSSP-----LTIHWHGL 97 69**********************************9876.....68****** PP AA1_1.hmm 55 fqkgtnwadgpafvtqCPiapgnsflydfkv 85 +q+gtnw+dg + +tqCPi pg +++y+f++ 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 98 YQNGTNWEDGISAITQCPIPPGVTYTYKFTL 128 *****************************97 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 86.8 0.1 3e-28 3e-28 2 75 .. 56 128 .. 55 130 .] 0.97 Alignments for each domain: == domain 1 score: 86.8 bits; conditional E-value: 3e-28 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 r+v+++N+q P p ie+n+gd vev++ N+l ++ ++H+HGl+qngtn+ DG 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 56 RSVLAINNQMPGPLIEANEGDDVEVTVINKL-SSPLTIHWHGLYQNGTNWEDG 107 899****************************.7899***************** PP AA1_2.hmm 55 asmvtqCpippgetltYeftv 75 s++tqCpippg t+tY+ft+ 197522|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 108 ISAITQCPIPPGVTYTYKFTL 128 *******************97 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (130 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 103.43 // Query: 150|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 [L=106] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-15 45.8 0.0 1.4e-15 45.7 0.0 1.1 1 AA1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.7 0.0 3.5e-16 1.4e-15 310 357 .. 21 68 .. 2 69 .. 0.89 Alignments for each domain: == domain 1 score: 45.7 bits; conditional E-value: 3.5e-16 AA1.hmm 310 vnfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 +++++e++ +rdtv+vp+ + vvir++ad pg w++hchi +H++ G 150|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 21 IQYNTENPLRRDTVVVPPASFVVIRLHADIPGAWIMHCHIGWHIAGGF 68 4788999999***********************************997 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (106 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 3 (0.75); expected 0.0 (0.001) Passed Fwd filter: 1 (0.25); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 226.13 // Query: 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 [L=707] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-101 328.8 0.1 1.8e-101 328.3 0.1 1.2 1 AA1.hmm 1.6e-79 255.3 0.1 9.3e-79 252.8 0.2 1.9 2 AA1_3.hmm 5.4e-75 240.5 0.0 5.8e-74 237.1 0.0 2.1 2 AA1_2.hmm 1.6e-69 222.3 0.0 3.2e-69 221.4 0.0 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 328.3 0.1 1.8e-101 1.8e-101 7 357 .. 73 668 .. 62 669 .. 0.82 Alignments for each domain: == domain 1 score: 328.3 bits; conditional E-value: 1.8e-101 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtn 57 + r+v+++Ngq+PgP+ieanegD++++tV+N++ s g+t+HwhG+ q+gtn 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 73 FLRPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQNGTN 122 6799****************************9.79*************** PP AA1.hmm 58 waDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGal 107 w+DGv gvtqcpi++ g sftY+f +++q Gt+wyHsH++ adG+ G+l 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 123 WEDGVTGVTQCPIPAdGGSFTYTFDLHGQFGTFWYHSHHQNLMADGINGPL 173 *************989*********************************** PP AA1.hmm 108 iirdpks..kekydvddeelvillsdwyhktaeell....ken...atgae 149 ii++p++ k+++d+d +++v++l+dwyh+t+++++ +e+ t a+ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 174 IIHSPRDplKRHVDFD-QDVVLILADWYHNTSTDIVehmlSEAgyfGTPAA 223 ***9966444489998.889***************9888833343456666 PP AA1.hmm 150 papdsllinGkgrlyncs...........sklevlkvepgktyrlrlinaa 189 p p+s+linG g+ ncs ++ ++++++g + r+rlina+ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 224 PGPNSALINGIGEW-NCSqaskaqqckqiNPPPEFTFKAGDKIRFRLINAG 273 66**********97.563344455554555556****************** PP AA1.hmm 190 lnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa 239 ++a++++s+d+H+l+v eaDg+ v p ++ + ++ Gqry+v++k+++++ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 274 VHAMFFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRYSVVIKTKKED 324 *********************99854899*****************98888 PP AA1.hmm 240 ..gnywiraslds...a....afdnttalailrYkgassas.......... 271 +++++ra++ds a + + t+ +ilr +++s+ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 325 agKSFYLRATMDSdcwAwvpdD-IQLTGFGILRLVDDESKIkkisqsqtrp 374 777******9999766255644.57899******77433325677777889 PP AA1.hmm 272 ................................................... 271 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 375 qtkdwpdeilgdcidlptsslvpilkesvpnsvvgsgsfkagfgfqfinnt 425 999************************************************ PP AA1.hmm 272 ................................................... 271 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 426 alhltraqavklaqkvnasslslttnprteelqttndtasflrngtartll 476 999999999999999999999999999888888888888888888888888 PP AA1.hmm 272 ................................................... 271 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 477 narsksveglwnldesesltalakrqvsvgqknlppgnrtnmlgitrtggp 527 888888877777777777777777777777777777777777777777777 PP AA1.hmm 272 ..............nvsf.vepstslleaysgvdetkaklkln........ 299 n+s+ + p ++l+++ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 528 pptpagtigkfflnNISWtTYPYRPVLHDL------------Tpggvgavn 566 777777777777766666444555665553............033333333 PP AA1.hmm 300 ...........................hp..lhghdfvvv........... 310 hp lh +d+++v 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 567 gsnvanviyptsewydlylanidpagsHPyhLHAMDMHIVaegkglptpen 617 333333445555666666777888899*************87777776665 PP AA1.hmm 311 ....nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 ++++ ++ +rdt++vp+ + +vir++ad pg w++hchi +H++ G 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 618 lakvSYNTANPLRRDTIVVPPASFTVIRLRADIPGAWIVHCHIGWHIAAGF 668 5544444777777***********************************997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 252.8 0.2 9.3e-79 9.3e-79 8 280 .. 51 343 .. 46 377 .. 0.86 2 ? -0.3 0.0 0.11 0.11 94 139 .. 637 682 .. 634 693 .. 0.80 Alignments for each domain: == domain 1 score: 252.8 bits; conditional E-value: 9.3e-79 AA1_3.hmm 8 pktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtv 58 ++ +tr+yt++vtest+a DG+ +++l++ngq+Pgp+iea+ GD+le+tv 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 51 TDKPKTRKYTFHVTESTAALDGFLRPVLAINGQIPGPLIEANEGDHLEITV 101 56789********************************************** PP AA1_3.hmm 59 knnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefrat.q 107 +n+++ G ++HwHGi q+ tn++DGv+gvtqCpi+ g sftY+f + q 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 102 VNQMS-VGLTLHWHGIYQNGTNWEDGVTGVTQCPIPAdGGSFTYTFDLHgQ 151 ***98.8****************************75499******9755* PP AA1_3.hmm 108 yGtswYHsHyslQyadGvlGplvinGP.....asanydvdlgpllltdwsh 153 +Gt wYHsH++ +adG+ Gpl+i+ P + ++d+d+ +l+l+dw+h 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 152 FGTFWYHSHHQNLMADGINGPLIIHSPrdplkRHVDFDQDV-VLILADWYH 201 **************************954433346677665.6789***** PP AA1_3.hmm 154 esafelveeae......asggppvadniLingknkvkkskk......eeeg 192 ++ +++ve++ + ++p ++ Ling +++++s++ ++ + 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 202 NTSTDIVEHMLseagyfGTPAAPGPNSALINGIGEWNCSQAskaqqcKQIN 252 ******9999877765555667899*************9986654444444 PP AA1_3.hmm 193 eysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pytt 242 e+++++g k r+rlin++v+++f +s+d+H+l+v +aD + p 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 253 PPPEFTFKAGDKIRFRLINAGVHAMFFYSVDEHTLNVTEADGTGVYgPPAL 303 45569***************************************9658899 PP AA1_3.hmm 243 dslligigqRydviveanqe..eenywlraelaeaCskln 280 + ++++ gqRy v++++++e ++++lra+++++C ++ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 304 HRVWLHNGQRYSVVIKTKKEdaGKSFYLRATMDSDCWAWV 343 ******************998899************9863 PP == domain 2 score: -0.3 bits; conditional E-value: 0.11 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasany 139 +p + ++ + ra+ G H H+ a+G +G ++++ +++ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 637 PPASFTVIRLRADIPGAWIVHCHIGWHIAAGFAGVVIVQPDVIKQF 682 5666666788899999999***************999986655555 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 237.1 0.0 5.8e-74 5.8e-74 2 268 .. 75 367 .. 74 389 .. 0.92 2 ? 0.8 0.0 0.043 0.043 77 106 .. 649 678 .. 635 686 .. 0.83 Alignments for each domain: == domain 1 score: 237.1 bits; conditional E-value: 5.8e-74 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnam 52 r+v+++Ngq P p ie+n+gd++e+++ N++ +lH+HG++qngtn+ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 75 RPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQNGTNWE 124 899****************************.8899*************** PP AA1_2.hmm 53 DGasmvtqCpip.pgetltYeftveeqvGtYWyHsHskgqYeDGlrgplii 102 DG+++vtqCpip +g ++tY+f+++ q Gt+WyHsH+++ DG+ gplii 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 125 DGVTGVTQCPIPaDGGSFTYTFDLHGQFGTFWYHSHHQNLMADGINGPLII 175 ***********845899********************************** PP AA1_2.hmm 103 edkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepip 147 + +++p ++d++++l+l+dwYh++s+++v+++ls+ y t a p p 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 176 HSPRDPLkrhvDFDQDVVLILADWYHNTSTDIVEHMLSEagYFGTPAAPGP 226 **997776777***************************9666778899*** PP AA1_2.hmm 148 dsllv..................netenatlevepgktYllriinvgafas 180 +s+l+ + + ++++++g + ++r+in g+ a+ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 227 NSALIngigewncsqaskaqqckQINPPPEFTFKAGDKIRFRLINAGVHAM 277 ******************9998877778899******************** PP AA1_2.hmm 181 qylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tskn 229 ++ ++++h++++ e+DG+ v p + + + +QRysv++k+k++ + k+ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 278 FFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRYSVVIKTKKEdAGKS 328 ******************9972556899***************997366** PP AA1_2.hmm 230 yalvakmdetmldvvpddlqlnvtstlvydksaalaeas 268 + l a+md++ + vpdd+ql l+ +++++ ++ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 329 FYLRATMDSDCWAWVPDDIQLTGFGILRLVDDESKIKKI 367 *********************999998877766665554 PP == domain 2 score: 0.8 bits; conditional E-value: 0.043 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke 106 + G++ +H+H + + G+ g++i++++ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 649 DIPGAWIVHCHIGWHIAAGFAGVVIVQPDV 678 5579999*******************9875 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 221.4 0.0 3.2e-69 3.2e-69 3 251 .. 70 337 .. 68 361 .. 0.88 Alignments for each domain: == domain 1 score: 221.4 bits; conditional E-value: 3.2e-69 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 DGf r + +ng++pgpli +++gd+++i+vvn+ m ++hwhg 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 70 LDGFLRPVLAINGQIPGPLIEANEGDHLEITVVNQ-----MSVGLTLHWHG 115 6********************************97.....668899***** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqyc 103 ++q+gtnw+dg++ vtqCPi + g sf+y+f++++q GtfwYHsh+++ + 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 116 IYQNGTNWEDGVTGVTQCPIPAdGGSFTYTFDLHGQFGTFWYHSHHQNLMA 166 ********************65489************************** PP AA1_1.hmm 104 dglrGalvvydpedplkslydvddestvitladwyhtaakell........ 146 dg+ G+l+++ p+dplk+ d+d++ v+ ladwyh++++++ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 167 DGINGPLIIHSPRDPLKRHVDFDQD-VVLILADWYHNTSTDIVehmlseag 216 **********************976.6899**********99989999999 PP AA1_1.hmm 147 ....klvavadstlinGlgryagg...peaelavvn......vekgkrYrf 184 +++ ++s+linG+g ++ + ++++ +n ++g + rf 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 217 yfgtPAAPGPNSALINGIGEWNCSqasKAQQCKQINpppeftFKAGDKIRF 267 998777799***********9955122333344443222222899****** PP AA1_1.hmm 185 rlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvl 234 rl++ ++ f +s+d+h+l+v eadg+ + p +++ + gqrysvv+ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 268 RLINAGVHAMFFYSVDEHTLNVTEADGTGVyGPPALHRVWLHNGQRYSVVI 318 ***************************97636999**************** PP AA1_1.hmm 235 eanqe..vdnYwiranpnl 251 ++++e + +++ra++++ 1130|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 319 KTKKEdaGKSFYLRATMDS 337 9987621468999998876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (707 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 118.15 // Query: 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 [L=465] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.6e-26 81.7 0.0 1.8e-26 81.6 0.0 1.1 1 AA1.hmm 4.4e-26 79.8 0.0 6.7e-26 79.2 0.0 1.1 1 AA1_3.hmm 1.9e-20 61.2 0.0 2.7e-20 60.7 0.0 1.2 1 AA1_2.hmm 2.8e-19 57.4 0.0 4.1e-19 56.8 0.0 1.2 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 81.6 0.0 1.8e-26 1.8e-26 133 280 .. 98 264 .. 88 439 .. 0.74 Alignments for each domain: == domain 1 score: 81.6 bits; conditional E-value: 1.8e-26 AA1.hmm 133 yhktaeellken.atgaepapdsllinGkgrlync.....s......skl 170 +h+ +e t a+p ++s+linG g+ nc s s+ 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 98 VHELLSEAG--HiGTPAAPGANSALINGVGEW-NCslattSqqckqvSSP 144 444444433..2356778889*********97.56455441455456555 PP AA1.hmm 171 evlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevd 219 +++v++g++ r+rlin +++a++++s+d+H l++ eaD +++ p + 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 145 PEFTVTAGQRIRFRLINSGVHAMFFYSVDEHMLNITEADSTPIYgPSDFR 194 69****************************************9659**** PP AA1.hmm 220 slqiapGqrydvllkanqsa..gnywiraslds...a....afdnttala 260 ++ ++ Gqry+v++++++++ +++ +ra++ds a + + ta + 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 195 HIWLHNGQRYSVIVQTKKEDagRSFHMRATMDSdcwAwipnD-IQDTAFG 243 ***************88888767******9999666255534.5788899 PP AA1.hmm 261 ilrYkgassas.nvsfvepst 280 ilr ++++++ ++s + p+t 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 244 ILRVVNEDTKPeKISKARPKT 264 999966544433344444433 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 79.2 0.0 6.7e-26 6.7e-26 153 300 .. 99 254 .. 88 266 .. 0.82 Alignments for each domain: == domain 1 score: 79.2 bits; conditional E-value: 6.7e-26 AA1_3.hmm 153 hesafelveeaeasggppvadniLingknkvkkskk......eeegeyse 196 he ++e+ + + ++p a++ Ling +++++s + ++ ++ e 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 99 HELLSEAGHIG--TPAAPGANSALINGVGEWNCSLAttsqqcKQVSSPPE 146 44444433333..4677899*************98877766656666677 PP AA1_3.hmm 197 vklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdsl 245 +++++g++ r+rlin++v+++f +s+d+H l++ +aD pi p + ++ 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 147 FTVTAGQRIRFRLINSGVHAMFFYSVDEHMLNITEADSTPIYgPSDFRHI 196 9****************************************759999*** PP AA1_3.hmm 246 ligigqRydviveanqe..eenywlraelaeaCskl..naeekeikailr 291 +++ gqRy viv++++e +++ +ra+++++C ++ n+ ++++ +ilr 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 197 WLHNGQRYSVIVQTKKEdaGRSFHMRATMDSDCWAWipNDIQDTAFGILR 246 ***************998899************99855677888899999 PP AA1_3.hmm 292 Yeeassaep 300 ++++ +p 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 247 VVNEDT-KP 254 888776.34 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 60.7 0.0 2.7e-20 2.7e-20 128 267 .. 95 256 .. 90 297 .. 0.82 Alignments for each domain: == domain 1 score: 60.7 bits; conditional E-value: 2.7e-20 AA1_2.hmm 128 kelvkeflskynptg..aepipdsllv..................neten 157 +++v+e+ls++ g a p +s+l+ + ++ 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 95 SDIVHELLSEAGHIGtpAAPGANSALIngvgewncslattsqqckQVSSP 144 56667766665544311555556777788888888888887777667777 PP AA1_2.hmm 158 atlevepgktYllriinvgafasqylvledhemtivevDGvdve.psevd 206 +++v++g++ ++r+in g+ a+++ ++++h ++i e+D++ + ps 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 145 PEFTVTAGQRIRFRLINSGVHAMFFYSVDEHMLNITEADSTPIYgPSDFR 194 899**************************************9853889** PP AA1_2.hmm 207 slyiavaQRysvLvkaknd.tsknyalvakmdetmldvvpddlqlnvtst 255 ++ + +QRysv+v++k++ + +++++ a+md++ + +p+d+q + 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 195 HIWLHNGQRYSVIVQTKKEdAGRSFHMRATMDSDCWAWIPNDIQDTAFGI 244 ****************997366**********************999888 PP AA1_2.hmm 256 lvydksaalaea 267 l+ ++ +++e+ 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 245 LRVVNEDTKPEK 256 877666665554 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 56.8 0.0 4.1e-19 4.1e-19 147 253 .. 111 229 .. 92 265 .. 0.74 Alignments for each domain: == domain 1 score: 56.8 bits; conditional E-value: 4.1e-19 AA1_1.hmm 147 klvavadstlinGlgrya...ggpeaelav......vnvekgkrYrfrlv 187 +++ a+s+linG+g ++ ++++++ +v++g+r rfrl+ 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 111 PAAPGANSALINGVGEWNcslATTSQQCKQvssppeFTVTAGQRIRFRLI 160 566899**********9944423333333311122268************ PP AA1_1.hmm 188 siscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvlea 236 + ++ f +s+d+h l++ ead++ + p + +i + gqrysv++++ 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 161 NSGVHAMFFYSVDEHMLNITEADSTPIyGPSDFRHIWLHNGQRYSVIVQT 210 *************************86369*******************9 PP AA1_1.hmm 237 nqevd..nYwiranpnlgk 253 ++e + + +ra++++ 6800|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 211 KKEDAgrSFHMRATMDSDC 229 8865323899999998776 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (465 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 139.06 // Query: 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 [L=646] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.5e-97 313.6 0.0 7.6e-97 313.1 0.0 1.1 1 AA1.hmm 3.3e-75 241.2 0.0 2e-74 238.6 0.0 1.8 2 AA1_3.hmm 2.1e-69 222.1 0.0 4.1e-67 214.6 0.0 2.2 2 AA1_2.hmm 9e-68 216.6 0.0 4.4e-67 214.4 0.0 1.9 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 313.1 0.0 7.6e-97 7.6e-97 7 354 .. 71 609 .. 60 611 .. 0.82 Alignments for each domain: == domain 1 score: 313.1 bits; conditional E-value: 7.6e-97 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtn 57 + r+v+++N ++PgP+iean gD++++tV N+l + +++ HwhGl+q+gtn 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 71 FLRRVLVINKHMPGPLIEANDGDNLEITVINQL-DSPLSFHWHGLHQNGTN 120 6799****************************9.68*************** PP AA1.hmm 58 waDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGal 107 w+DG vtqcpi++ g +tY+f++ +q+Gt+wyH+H++ +adG+ G+l 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 121 WEDGITAVTQCPIPAsGGRYTYKFQLRKQYGTFWYHAHHQNLKADGILGPL 171 *************989*********************************** PP AA1.hmm 108 iirdpkske....kydvddeelvillsdwyhktaeell......ken..at 146 ii++p+ + +d+d +e+v++l+dwyh+ ++e++ k + 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 172 IIHSPE--DplkrGVDFD-QEIVLILTDWYHTMSSEIVrqmrspK-GymGS 218 ***995..3345589988.999****************8888752.23467 PP AA1.hmm 147 gaepapdsllinGkgrlync.....s.....sklevlkvepgktyrlrlin 187 a+p p+s+l+nG g++ nc s ++ +++v +g++ r+r+i+ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 219 AAAPSPNSALMNGVGEY-NCrfatkSercktTSPPEFSVVAGNKVRFRIIG 268 78888**********96.665666514554555669*************** PP AA1.hmm 188 aalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllk..a 235 ++ a+++fs d+H l+v eaD+++v+ p+ ++ ++++ Gqry+++++ + 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 269 GGSLAMFYFSADQHVLNVTEADATPVHgPTGIHRVKLHNGQRYSAIVTigE 319 *************************986899*****************744 PP AA1.hmm 236 nqsagnywiraslds......a.afdnttalailrYkg.......assas. 271 +++ ++++ir +++s + + + ta++i+r ++ + s 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 320 KEAGSSFYIRGTMESdcwswvNnD-VQLTAYGIVRVSAsngyidpR---Ss 366 44347******8888666443233.467888888886655555541...04 PP AA1.hmm 272 ................................................... 271 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 367 qerpvsrdwkeqpdgscvdlnpnelspiipvsppkkvagtgqftsafgfrs 417 567888999999999999999999*************************** PP AA1.hmm 272 ................................................... 271 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 418 ifnssqiapdaapptpgtvipgmkkrqvqittadgsaprgnaplpapitln 468 ****************************99999999999999999999999 PP AA1.hmm 272 .............................................nvsfve 277 +s++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 469 agpppipkngvarwfvnnvtweaftyqpilfdltpggvgrvnetrVTSVTF 519 999999999999999995544444444444444444444444333223333 PP AA1.hmm 278 pstslleaysgvdetka.........klklnhp..lhghdfvvv....... 310 p+ + ++ lnhp lhg+d+++v 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 520 PTA-------------EwydlylvntDAGLNHPfhLHGMDMHLVafgtglp 557 333.............033333333356677*************6666666 PP AA1.hmm 311 ........nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHl 353 ++ ++++ +rdtv+v+ g+ vv r++ad +gvw++hch+ +Hl 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 558 tpdvlsklQYRTDNPLRRDTVMVEGGSFVVARVRADLVGVWMMHCHMGWHL 608 55554433333888888*********************************9 PP AA1.hmm 354 s 354 s 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 609 S 609 7 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 238.6 0.0 2e-74 2e-74 7 304 .. 48 367 .. 43 374 .. 0.87 2 ? -0.1 0.0 0.091 0.091 191 231 .. 511 551 .. 488 553 .. 0.85 Alignments for each domain: == domain 1 score: 238.6 bits; conditional E-value: 2e-74 AA1_3.hmm 7 vpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevt 57 ++++g+tr++ levt+ t++pDG+ +++l++n+++Pgp+iea+ GD+le+t 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 48 INSKGITRKFVLEVTNITASPDGFLRRVLVINKHMPGPLIEANDGDNLEIT 98 5689*********************************************** PP AA1_3.hmm 58 vknnlkknGtsiHwHGirqlntneqDGvpgvtqCpi.apgesftYefra.t 106 v n+l+ s+HwHG++q+ tn++DG+++vtqCpi a g +tY+f+ + 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 99 VINQLD-SPLSFHWHGLHQNGTNWEDGITAVTQCPIpASGGRYTYKFQLrK 148 *****8.689**************************44699******9747 PP AA1_3.hmm 107 qyGtswYHsHyslQyadGvlGplvinGPas...anydvdl.gpllltdwsh 153 qyGt wYH+H++ adG+lGpl+i+ P+ d d +l+ltdw+h 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 149 QYGTFWYHAHHQNLKADGILGPLIIHSPEDplkRGVDFDQeIVLILTDWYH 199 9**************************9642224455555246789***** PP AA1_3.hmm 154 esafelveeae......asggppvadniLingknkvkkskk.....eeege 193 + +e+v++++ s+++p+ ++ L+ng ++++++ + ++++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 200 TMSSEIVRQMRspkgymGSAAAPSPNSALMNGVGEYNCRFAtkserCKTTS 250 *******99998777755667799**************8886665555666 PP AA1_3.hmm 194 ysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttd 243 e+++ +g+k r+r+i ++ ++f fs d+H l+v +aD p++ p + 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 251 PPEFSVVAGNKVRFRIIGGGSLAMFYFSADQHVLNVTEADATPVHgPTGIH 301 67799***************************************868889* PP AA1_3.hmm 244 slligigqRydviveanqe..eenywlraelaeaCskl..naeekeikail 290 + ++ gqRy iv+ ++ +++++r +++++C ++ n+ + ++ +i+ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 302 RVKLHNGQRYSAIVTIGEKeaGSSFYIRGTMESDCWSWvnNDVQLTAYGIV 352 *************9987776799************9974345566677888 PP AA1_3.hmm 291 rYeeass.aeptska 304 r ++++ +p s++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 353 RVSASNGyIDPRSSQ 367 887777656666655 PP == domain 2 score: -0.1 bits; conditional E-value: 0.091 AA1_3.hmm 191 egeysevklekgkkyrlrlintsvdstfkfsidgHkltvia 231 e++ ++v++ + + y l l+nt + f++ g +++++a 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 511 ETRVTSVTFPTAEWYDLYLVNTDAGLNHPFHLHGMDMHLVA 551 56677899999999********9999999999999998876 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 214.6 0.0 4.1e-67 4.1e-67 2 265 .. 73 361 .. 72 390 .. 0.93 2 ! 5.3 0.0 0.0019 0.0019 142 194 .. 470 551 .. 444 565 .. 0.86 Alignments for each domain: == domain 1 score: 214.6 bits; conditional E-value: 4.1e-67 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnam 52 rrv+ +N + P p ie+n gd++e+++ N+l d++ s+H+HGl+qngtn+ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 73 RRVLVINKHMPGPLIEANDGDNLEITVINQL-DSPLSFHWHGLHQNGTNWE 122 89*****************************.99***************** PP AA1_2.hmm 53 DGasmvtqCpip.pgetltYeftveeqvGtYWyHsHskgqYeDGlrgplii 102 DG ++vtqCpip g ++tY+f++++q+Gt+WyH+H+++ DG+ gplii 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 123 DGITAVTQCPIPaSGGRYTYKFQLRKQYGTFWYHAHHQNLKADGILGPLII 173 ***********835899********************************** PP AA1_2.hmm 103 edkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepip 147 + +e+p ++d+e++l+l+dwYh+ s+e+v+++ s+ y ++a p p 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 174 HSPEDPLkrgvDFDQEIVLILTDWYHTMSSEIVRQMRSPkgYMGSAAAPSP 224 ****9988889**************************99556667799*** PP AA1_2.hmm 148 dsllv.................netenatlevepgktYllriinvgafasq 181 +s+l+ ++t+ +++v +g++ ++rii g +a++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 225 NSALMngvgeyncrfatksercKTTSPPEFSVVAGNKVRFRIIGGGSLAMF 275 *******************999999999*********************** PP AA1_2.hmm 182 ylvledhemtivevDGvdvepse.vdslyiavaQRysvLvkaknd.tskny 230 y++ ++h +++ e+D++ v+ + ++ +++ +QRys +v+ ++ + +++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 276 YFSADQHVLNVTEADATPVHGPTgIHRVKLHNGQRYSAIVTIGEKeAGSSF 326 *******************955549****************98773669** PP AA1_2.hmm 231 alvakmdetmldvvpddlqlnvtstlvydksaala 265 + +m+++ + v +d+ql + ++ ++s+ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 327 YIRGTMESDCWSWVNNDVQLTAYGIVRVSASNGYI 361 ********************999888877776655 PP == domain 2 score: 5.3 bits; conditional E-value: 0.0019 AA1_2.hmm 142 gaepipdsllv.............................netenatleve 163 g pip++ + net+ +++++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 470 GPPPIPKNGVArwfvnnvtweaftyqpilfdltpggvgrvNETRVTSVTFP 520 4556666666688888888888888888889999999999*********** PP AA1_2.hmm 164 pgktYllriinvgafasqylvledhemtive 194 + + Y l ++n+ a ++ ++l + +m++v 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 521 TAEWYDLYLVNTDAGLNHPFHLHGMDMHLVA 551 ***************************9996 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 214.4 0.0 4.4e-67 4.4e-67 2 280 .. 67 367 .. 66 379 .. 0.85 2 ? -0.8 0.0 0.14 0.14 159 208 .. 505 551 .. 480 566 .. 0.81 Alignments for each domain: == domain 1 score: 214.4 bits; conditional E-value: 4.4e-67 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwh 52 spDGf r++ ++n+++pgpli ++ gd+++i+v+n+L+ + s hwh 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 67 SPDGFLRRVLVINKHMPGPLIEANDGDNLEITVINQLDSP-----LSFHWH 112 7***********************************9875.....69**** PP AA1_1.hmm 53 glfqkgtnwadgpafvtqCPi.apgnsflydfkvpdqaGtfwYHshlstqy 102 gl+q+gtnw+dg + vtqCPi a+g ++y+f++++q GtfwYH+h+++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 113 GLHQNGTNWEDGITAVTQCPIpASGGRYTYKFQLRKQYGTFWYHAHHQNLK 163 *********************446899************************ PP AA1_1.hmm 103 cdglrGalvvydpedplkslydvddestvitladwyhtaakell....... 146 dg+ G+l+++ pedplk+ d+d+e v+ l+dwyht+++e+ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 164 ADGILGPLIIHSPEDPLKRGVDFDQE-IVLILTDWYHTMSSEIVrqmrspk 213 ***********************987.6889**********9998999999 PP AA1_1.hmm 147 .....klvavadstlinGlgryagg........peaelavvnvekgkrYrf 184 ++++ ++s+l+nG+g y+ ++++ +v +g++ rf 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 214 gymgsAAAPSPNSALMNGVGEYNCRfatksercKTTSPPEFSVVAGNKVRF 264 999888889***********9984433334444455566789********* PP AA1_1.hmm 185 rlvsiscdpnftfsidghnltvieadgvn.tkpltvdsiqifagqrysvvl 234 r++ + + f fs d+h l+v ead++ + p+ ++++++ gqrys ++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 265 RIIGGGSLAMFYFSADQHVLNVTEADATPvHGPTGIHRVKLHNGQRYSAIV 315 ***************************98256999***************9 PP AA1_1.hmm 235 eanqe..vdnYwiranpnlgk...ntgfegginsailrykgape.aePttk 279 + ++ + ++ir ++++ ++ + + i+r ++++ +P+++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 316 TIGEKeaGSSFYIRGTMESDCwswVNNDVQLTAYGIVRVSASNGyIDPRSS 366 97554114689****999887443233333344567777665431477666 PP AA1_1.hmm 280 q 280 q 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 367 Q 367 6 PP == domain 2 score: -0.8 bits; conditional E-value: 0.14 AA1_1.hmm 159 GlgryaggpeaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvie 208 G+gr+++ + ++ v+ + + Y + lv++ + n+ f + g +++++ 124656|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 505 GVGRVNE---TRVTSVTFPTAEWYDLYLVNTDAGLNHPFHLHGMDMHLVA 551 6666654...4566778888899****************99999998876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (646 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 124.35 // Query: 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 [L=645] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-88 286.1 0.0 1.6e-88 285.7 0.0 1.1 1 AA1.hmm 9.1e-68 216.7 0.0 3.9e-66 211.4 0.0 2.7 3 AA1_3.hmm 4.6e-60 191.4 0.0 1.9e-56 179.6 0.0 3.2 3 AA1_2.hmm 1.1e-56 180.2 0.0 6e-56 177.8 0.0 2.2 4 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 285.7 0.0 1.6e-88 1.6e-88 7 357 .. 71 605 .. 60 606 .. 0.81 Alignments for each domain: == domain 1 score: 285.7 bits; conditional E-value: 1.6e-88 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtn 57 + r+v+++N+q+PgP+iean gD++++tV N+l + +++ HwhG++q+gtn 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 71 YLRRVLVINNQMPGPLIEANDGDNLEITVINQL-DSPLSFHWHGIHQNGTN 120 6799****************************9.68*************** PP AA1.hmm 58 waDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGal 107 w+DG vtqcpi++ g +tY+f++ H+H++ +adG++G+l 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 121 WEDGITAVTQCPIPAsGGRYTYKFQLR-------KHAHHQNLKADGIMGPL 164 *************989**********9.......7**************** PP AA1.hmm 108 iirdpkske....kydvddeelvillsdwyhktaeell......ken..at 146 i+++p+ + +d+d +e+v++l+dwyh+ ++e++ + + 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 165 IVHSPE--DplkrGVDFD-QEIVLMLTDWYHTMSTEIVrqmrspQ-GymGS 211 ***995..3345589988.999****************8888742.23467 PP AA1.hmm 147 gaepapdsllinGkgrlync.....s.....sklevlkvepgktyrlrlin 187 +++p p+s+l+nG g++ nc s ++ +++v +g + r+r+i+ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 212 SSAPSPNSALMNGVGEY-NCrfatsSercktTSPPEFSVAAGSKVRFRIIG 261 77888**********96.665666514554555669*************** PP AA1.hmm 188 aalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllk..a 235 ++ a+++fs d+H l+v eaD+++v p+ ++ ++++ Gqry+++++ + 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 262 GGSLAMFYFSADQHLLNVTEADATPVYgPTGIHRVKLHNGQRYSAIVTigE 312 *************************964999*****************855 PP AA1.hmm 236 nqsagnywiraslds...a....afdnttalailrYkg........assas 271 +++ ++++ir +++s + + + ta++i+r ++ + s 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 313 DEAGSSFYIRGTMESdcwSwvnnD-VQLTAYGIVRVSEingfinprS---S 359 55557******8888666244433.4677888888877777886541...1 PP AA1.hmm 272 ................................................... 271 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 360 qtrpvsrdwkdqpdgscvdlnpndlspiipvsppkqvagtgqftsafgfqs 410 45678888999999999999999999************************* PP AA1.hmm 272 ................................................... 271 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 411 ifnrsqiapdaapptpgtvipgmkkrqvqittldgyaprgnaplpapitkn 461 ***********************************9999999999999999 PP AA1.hmm 272 ..........................................nvsfvepst 280 n 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 462 agpppipkdgvarwfvnnvtweaftyqpilfdltpggvgevnN-------- 504 9999999999999999944333333333333333333333331........ PP AA1.hmm 281 slleaysgvdetka..................klklnhp..lhghdfvvv. 310 t+ ++ lnhp lhg+d+++v 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 505 -----------TRVtsvtfptaewydlllvntDAGLNHPfhLHGMDMHLVa 544 ...........22233433444444444444456666*************6 PP AA1.hmm 311 .......nfd........aedeakrdtvavpkggwvvirfvadnpgvwllh 346 + d ++++ +rdtv+++ g+ vv r++ad +gvw++h 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 545 fgtglptE-DvlrnleyrTDNPLRRDTVLIEGGSFVVARVRADLVGVWMMH 594 66666540.144444455777777*************************** PP AA1.hmm 347 chieaHlsmGl 357 ch+ +Hls G 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 595 CHMGWHLSGGF 605 ********995 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 211.4 0.0 3.9e-66 3.9e-66 7 303 .. 48 359 .. 43 367 .. 0.86 2 ? -0.1 0.0 0.096 0.096 190 231 .. 503 544 .. 484 546 .. 0.82 3 ? 1.0 0.0 0.044 0.044 96 132 .. 576 612 .. 571 635 .. 0.84 Alignments for each domain: == domain 1 score: 211.4 bits; conditional E-value: 3.9e-66 AA1_3.hmm 7 vpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevt 57 +++ g+tr++ levt+ t++pDG+ +++l++n+q+Pgp+iea+ GD+le+t 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 48 INSDGITRKFVLEVTNITASPDGYLRRVLVINNQMPGPLIEANDGDNLEIT 98 56789********************************************** PP AA1_3.hmm 58 vknnlkknGtsiHwHGirqlntneqDGvpgvtqCpi.apgesftYefratq 107 v n+l+ s+HwHGi+q+ tn++DG+++vtqCpi a g +tY+f+ + 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 99 VINQLD-SPLSFHWHGIHQNGTNWEDGITAVTQCPIpASGGRYTYKFQLRK 148 *****8.689**************************44699*******998 PP AA1_3.hmm 108 yGtswYHsHyslQyadGvlGplvinGPas...anydvdl.gpllltdwshe 154 H+H++ adG++Gpl+++ P+ d d +l+ltdw+h+ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 149 ------HAHHQNLKADGIMGPLIVHSPEDplkRGVDFDQeIVLMLTDWYHT 193 ......9*******************9642224455554246899****** PP AA1_3.hmm 155 safelveeae......asggppvadniLingknkvkkskk.....eeegey 194 +e+v++++ s+++p+ ++ L+ng ++++++ + ++++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 194 MSTEIVRQMRspqgymGSSSAPSPNSALMNGVGEYNCRFAtsserCKTTSP 244 ******99998777765677899**************88866665556666 PP AA1_3.hmm 195 sevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttds 244 e+++ +g k r+r+i ++ ++f fs d+H l+v +aD p+ p + 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 245 PEFSVAAGSKVRFRIIGGGSLAMFYFSADQHLLNVTEADATPVYgPTGIHR 295 789****************************************758889** PP AA1_3.hmm 245 lligigqRydviveanqe..eenywlraelaeaCskl..naeekeikailr 291 + ++ gqRy iv+ ++ +++++r +++++C ++ n+ + ++ +i+r 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 296 VKLHNGQRYSAIVTIGEDeaGSSFYIRGTMESDCWSWvnNDVQLTAYGIVR 346 ***********99987776799************99733355566777887 PP AA1_3.hmm 292 Yeeass.aeptsk 303 +e + +p s+ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 347 VSEINGfINPRSS 359 7766655566655 PP == domain 2 score: -0.1 bits; conditional E-value: 0.096 AA1_3.hmm 190 eegeysevklekgkkyrlrlintsvdstfkfsidgHkltvia 231 ++++ ++v++ + + y l l+nt + f++ g +++++a 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 503 NNTRVTSVTFPTAEWYDLLLVNTDAGLNHPFHLHGMDMHLVA 544 456677888889999999999999999999999888888776 PP == domain 3 score: 1.0 bits; conditional E-value: 0.044 AA1_3.hmm 96 gesftYefratqyGtswYHsHyslQyadGvlGplvin 132 g+ ++ + ra+ G + H H + G +G +v++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 576 GSFVVARVRADLVGVWMMHCHMGWHLSGGFVGVVVVQ 612 5566667899999********************9997 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 179.6 0.0 1.9e-56 1.9e-56 2 257 .. 73 346 .. 72 373 .. 0.92 2 ! 4.5 0.0 0.0033 0.0033 141 194 .. 462 544 .. 436 556 .. 0.82 3 ! 3.4 0.0 0.0071 0.0071 76 106 .. 585 615 .. 571 628 .. 0.82 Alignments for each domain: == domain 1 score: 179.6 bits; conditional E-value: 1.9e-56 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnam 52 rrv+ +N+q P p ie+n gd++e+++ N+l d++ s+H+HG++qngtn+ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 73 RRVLVINNQMPGPLIEANDGDNLEITVINQL-DSPLSFHWHGIHQNGTNWE 122 89*****************************.99***************** PP AA1_2.hmm 53 DGasmvtqCpip.pgetltYeftveeqvGtYWyHsHskgqYeDGlrgplii 102 DG ++vtqCpip g ++tY+f++ H+H+++ DG+ gpli+ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 123 DGITAVTQCPIPaSGGRYTYKFQL-------RKHAHHQNLKADGIMGPLIV 166 ***********835889*******.......46****************** PP AA1_2.hmm 103 edkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepip 147 + +e+p ++d+e++l+l+dwYh+ s+e+v+++ s+ y + p p 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 167 HSPEDPLkrgvDFDQEIVLMLTDWYHTMSTEIVRQMRSPqgYMGSSSAPSP 217 ****9988889***************************94455566789** PP AA1_2.hmm 148 dsllv.................netenatlevepgktYllriinvgafasq 181 +s+l+ ++t+ +++v +g + ++rii g +a++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 218 NSALMngvgeyncrfatssercKTTSPPEFSVAAGSKVRFRIIGGGSLAMF 268 ********************99999999*********************** PP AA1_2.hmm 182 ylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tskny 230 y++ ++h +++ e+D++ v p+ ++ +++ +QRys +v+ +d + +++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 269 YFSADQHLLNVTEADATPVYgPTGIHRVKLHNGQRYSAIVTIGEDeAGSSF 319 *****************9963667*****************98873669** PP AA1_2.hmm 231 alvakmdetmldvvpddlqlnvtstlv 257 + +m+++ + v +d+ql + ++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 320 YIRGTMESDCWSWVNNDVQLTAYGIVR 346 *******************99877665 PP == domain 2 score: 4.5 bits; conditional E-value: 0.0033 AA1_2.hmm 141 tgaepipdsllv.............................netenatlev 162 g pip+ + n+t+ +++++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 462 AGPPPIPKDGVArwfvnnvtweaftyqpilfdltpggvgevNNTRVTSVTF 512 4555666666667777777777777777777888888888899999***** PP AA1_2.hmm 163 epgktYllriinvgafasqylvledhemtive 194 + + Y l ++n+ a ++ ++l + +m++v 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 513 PTAEWYDLLLVNTDAGLNHPFHLHGMDMHLVA 544 ****************************9996 PP == domain 3 score: 3.4 bits; conditional E-value: 0.0071 AA1_2.hmm 76 eeqvGtYWyHsHskgqYeDGlrgpliiedke 106 + vG + +H+H++ + + G+ g+++++++e 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 585 ADLVGVWMMHCHMGWHLSGGFVGVVVVQPDE 615 46789999********************987 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 177.8 0.0 6e-56 6e-56 2 253 .. 67 329 .. 66 366 .. 0.86 2 ? -3.0 0.0 0.68 0.68 6 36 .. 412 444 .. 412 446 .. 0.79 3 ? -3.3 0.0 0.85 0.85 170 207 .. 506 543 .. 498 546 .. 0.76 4 ? -2.6 0.0 0.51 0.51 78 113 .. 577 612 .. 572 620 .. 0.79 Alignments for each domain: == domain 1 score: 177.8 bits; conditional E-value: 6e-56 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwh 52 spDG+ r++ ++n+++pgpli ++ gd+++i+v+n+L+ + s hwh 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 67 SPDGYLRRVLVINNQMPGPLIEANDGDNLEITVINQLDSP-----LSFHWH 112 7***********************************9875.....69**** PP AA1_1.hmm 53 glfqkgtnwadgpafvtqCPi.apgnsflydfkvpdqaGtfwYHshlstqy 102 g++q+gtnw+dg + vtqCPi a+g ++y+f++++ H+h+++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 113 GIHQNGTNWEDGITAVTQCPIpASGGRYTYKFQLRK-------HAHHQNLK 156 *********************446899*******76.......78899999 PP AA1_1.hmm 103 cdglrGalvvydpedplkslydvddestvitladwyhtaakell....... 146 dg+ G+l+v+ pedplk+ d+d+e v++l+dwyht+++e+ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 157 ADGIMGPLIVHSPEDPLKRGVDFDQE-IVLMLTDWYHTMSTEIVrqmrspq 206 9**********************987.699***********9998999999 PP AA1_1.hmm 147 .....klvavadstlinGlgryagg........peaelavvnvekgkrYrf 184 + ++ ++s+l+nG+g y+ ++++ +v++g + rf 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 207 gymgsSSAPSPNSALMNGVGEYNCRfatssercKTTSPPEFSVAAGSKVRF 257 999887889***********9984433334444555666799********* PP AA1_1.hmm 185 rlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvl 234 r++ + + f fs d+h l+v ead++ + p+ ++++++ gqrys ++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 258 RIIGGGSLAMFYFSADQHLLNVTEADATPVyGPTGIHRVKLHNGQRYSAIV 308 ***************************98736999***************9 PP AA1_1.hmm 235 ea..nqevdnYwiranpnlgk 253 + +++ + ++ir ++++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 309 TIgeDEAGSSFYIRGTMESDC 329 862255667999*99998776 PP == domain 2 score: -3.0 bits; conditional E-value: 0.68 AA1_1.hmm 6 fsrsavlvngt..fpgplitgkkgdkfkinvvn 36 f+rs + + +pg++i g k +++i+ + 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 412 FNRSQIAPDAAppTPGTVIPGMKKRQVQITTLD 444 56777776665558999*********9999876 PP == domain 3 score: -3.3 bits; conditional E-value: 0.85 AA1_1.hmm 170 elavvnvekgkrYrfrlvsiscdpnftfsidghnltvi 207 ++ v+ + + Y + lv++ + n+ f + g +++++ 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 506 RVTSVTFPTAEWYDLLLVNTDAGLNHPFHLHGMDMHLV 543 45566667778899999999999999999988888765 PP == domain 4 score: -2.6 bits; conditional E-value: 0.51 AA1_1.hmm 78 sflydfkvpdqaGtfwYHshlstqycdglrGalvvy 113 sf+ +d G + H h+ g G +vv 1117583|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 577 SFVVARVRADLVGVWMMHCHMGWHLSGGFVGVVVVQ 612 5666556678889999***************99985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (645 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 107.84 // Query: WAQ88008.1|AA1 [L=583] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.9e-64 206.5 0.0 2.6e-64 206.0 0.0 1.1 1 AA1.hmm 5.5e-47 148.4 0.0 1.2e-44 140.7 0.0 2.9 3 AA1_2.hmm 1.4e-43 137.3 0.0 3e-42 132.9 0.1 2.1 2 AA1_3.hmm 6.6e-41 128.4 0.1 1.6e-40 127.2 0.1 1.6 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 206.0 0.0 2.6e-64 2.6e-64 84 357 .. 20 545 .. 13 546 .. 0.81 Alignments for each domain: == domain 1 score: 206.0 bits; conditional E-value: 2.6e-64 AA1.hmm 84 eqaGtywyHsHvslqyadGlrGaliirdpks..kekydvddeelvillsdwyhktaeell......ken.atgaepapdsllinGkgrlync... 166 + Gt+wyHsH++ adG+ G++ii++pk+ k+++d+d e++v++lsdwyh+t+++++ ++ t a+p ++s+linG g+ nc WAQ88008.1|AA1 20 HRFGTFWYHSHHQNLMADGINGPMIIHSPKDplKRSVDFD-EDVVLMLSDWYHNTSSDIVremlseAGHiGTAAAPGANSALINGVGEW-NCsla 112 378************************9955444499998.899****************88886522367788888**********97.56354 PP AA1.hmm 167 .s.......sklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywiraslds 250 + ++ ++++++g++ r+rlina+++a++++s+d+H l++ eaD ++v p + ++ ++ Gqry+v++++++++ +n+ +ra++ds WAQ88008.1|AA1 113 tTtqqckqvTSPPEFTITAGQRIRFRLINAGVHAMFFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKDagRNFHMRATMDS 207 40445545655569****************************************9659*******************88888767******9999 PP AA1.hmm 251 ...a....afdnttalailrYkgassas................................................................... 271 + + + ta ++lr +++ ++ WAQ88008.1|AA1 208 dcwSwvpnD-IQDTAFGVLRVVNDNAKPvkiskalpntrgwpqdfpqecldidpkimvpivkrsvpasvvgsgrfeagfgfqfinntqehlsrsd 301 766255534.578999*****887666689999999*********************************************************** PP AA1.hmm 272 ............................................................................................... 271 WAQ88008.1|AA1 302 avkiaeelnldwtrdqnlrekkkfvtpsqpvarsadsksaaedrngshviprrsgsgrgethqekssplralsnkrqveitheipppfgyrpsll 396 ********************887777777777777777777777777777777777777777777777777777777777777777777777777 PP AA1.hmm 272 ......................nvsf.vepstslleay..sgv...detkaklkln..........................hp..lhghdfvvv 310 n+s+ + p +++l+++ gv + hp lh +d+++v WAQ88008.1|AA1 397 gvtrlagppptpvgtigkyfmnNISWaTYPYQPVLHDLtpGGVgtiN--------SsrvanvifptpewydlylvnvdatgsHPyhLHAMDMHIV 483 77777777777777777777777777455666666663232224331........033333344455555555556667788************* PP AA1.hmm 311 ...............nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 +++++++ +rdtv+vp+ + vvir+ ad pg w++hchi +H++ G WAQ88008.1|AA1 484 afgrgfptaerlsqlEYNTDNPLRRDTVVVPPASFVVIRILADIPGAWIMHCHIGWHIAGGF 545 888777766666555555888888**********************************9997 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 140.7 0.0 1.2e-44 1.2e-44 77 265 .. 20 234 .. 12 275 .. 0.90 2 ? 1.8 0.0 0.023 0.023 151 194 .. 441 484 .. 412 493 .. 0.83 3 ? 1.9 0.0 0.021 0.021 77 114 .. 526 564 .. 511 579 .. 0.79 Alignments for each domain: == domain 1 score: 140.7 bits; conditional E-value: 1.2e-44 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflskynp..tgaepipdsllv............. 152 + Gt+WyHsH+++ DG+ gp+ii+ +++p ++de+++l+lsdwYh++s+++v+e+ls++ t+a p +s+l+ WAQ88008.1|AA1 20 HRFGTFWYHSHHQNLMADGINGPMIIHSPKDPLkrsvDFDEDVVLMLSDWYHNTSSDIVREMLSEAGHigTAAAPGANSALIngvgewncslatt 114 678***************************8887888***************************976511667788899999************* PP AA1_2.hmm 153 .....netenatlevepgktYllriinvgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetm 240 + t+ ++++++g++ ++r+in g+ a+++ ++++h ++i e+D++ v ps ++ + +QRysv++++k++ + +n+++ a+md++ WAQ88008.1|AA1 115 tqqckQVTSPPEFTITAGQRIRFRLINAGVHAMFFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKdAGRNFHMRATMDSDC 209 *99988889999***************************************9953889*******************98466************* PP AA1_2.hmm 241 ldvvpddlqlnvtstlvydksaala 265 + vp+d+q + +l+ +++a++ WAQ88008.1|AA1 210 WSWVPNDIQDTAFGVLRVVNDNAKP 234 *********9999988776666655 PP == domain 2 score: 1.8 bits; conditional E-value: 0.023 AA1_2.hmm 151 lvnetenatlevepgktYllriinvgafasqylvledhemtive 194 +n+++ a++ + + + Y l ++nv a s+ +l +m+iv WAQ88008.1|AA1 441 TINSSRVANVIFPTPEWYDLYLVNVDATGSHPYHLHAMDMHIVA 484 67888889999999999***********************9996 PP == domain 3 score: 1.9 bits; conditional E-value: 0.021 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.epyeydee 114 + G++ +H+H + + G+ g ++++++ +e ee WAQ88008.1|AA1 526 DIPGAWIMHCHIGWHIAGGFAGIVVVQPDAvRRFEIPEE 564 5579999********************987556666555 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 132.9 0.1 3e-42 3e-42 106 292 .. 20 227 .. 15 245 .. 0.85 2 ? 1.7 0.0 0.026 0.026 103 156 .. 523 576 .. 511 581 .. 0.82 Alignments for each domain: == domain 1 score: 132.9 bits; conditional E-value: 3e-42 AA1_3.hmm 106 tqyGtswYHsHyslQyadGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae......asggppvadniLingknkvkkskk. 188 +++Gt wYHsH++ +adG+ Gp++i+ P s ++d+d+ +l+l+dw+h++ +++v+e+ ++++p a++ Ling +++++s + WAQ88008.1|AA1 20 HRFGTFWYHSHHQNLMADGINGPMIIHSPkdplkRSVDFDEDV-VLMLSDWYHNTSSDIVREMLseaghiGTAAAPGANSALINGVGEWNCSLAt 113 68**************************955444478899986.789***********99999877776556677999*************9886 PP AA1_3.hmm 189 .....eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe..eenywlraelaea 275 ++ ++ e+++++g++ r+rlin++v+++f +s+d+H l++ +aD p+ p + +++++ gqRy vi++++++ +n+ +ra+++++ WAQ88008.1|AA1 114 ttqqcKQVTSPPEFTITAGQRIRFRLINAGVHAMFFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKdaGRNFHMRATMDSD 208 666555555666799***************************************759999******************998899*********** PP AA1_3.hmm 276 Cskl..naeekeikailrY 292 C ++ n+ ++++ ++lr WAQ88008.1|AA1 209 CWSWvpNDIQDTAFGVLRV 227 *997444556666666665 PP == domain 2 score: 1.7 bits; conditional E-value: 0.026 AA1_3.hmm 103 fratqyGtswYHsHyslQyadGvlGplvinGPasanydvdlgpllltdwshesa 156 a+ G H H+ a G +G +v++ a +++ + + l d +e + WAQ88008.1|AA1 523 ILADIPGAWIMHCHIGWHIAGGFAGIVVVQPDAVRRFEIPEESIALCDSRTEPM 576 55666688899*******************99*****99999999998877765 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 127.2 0.1 1.6e-40 1.6e-40 86 253 .. 19 209 .. 12 242 .. 0.83 2 ? -3.3 0.0 0.86 0.86 84 113 .. 523 552 .. 512 555 .. 0.78 Alignments for each domain: == domain 1 score: 127.2 bits; conditional E-value: 1.6e-40 AA1_1.hmm 86 pdqaGtfwYHshlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgrya...g 165 ++ GtfwYHsh+++ + dg+ G+++++ p+dplk+ d+d+ + v++l+dwyh++++++ ++++ a+s+linG+g ++ + WAQ88008.1|AA1 19 LHRFGTFWYHSHHQNLMADGINGPMIIHSPKDPLKRSVDFDE-DVVLMLSDWYHNTSSDIVremlseaghigtAAAPGANSALINGVGEWNcslA 112 5678************************************85.689************99999999999998878899***********995443 PP AA1_1.hmm 166 gpeaelavv......nvekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqe..vdnYwiranpnl 251 +++++ v ++++g+r rfrl++ ++ f +s+d+h l++ ead++ + p + ++ + gqrysv+++++++ +n+ +ra++++ WAQ88008.1|AA1 113 TTTQQCKQVtsppefTITAGQRIRFRLINAGVHAMFFYSVDEHMLNITEADSTPVyGPSDFRHVWLHNGQRYSVIIQTKEKdaGRNFHMRATMDS 207 444444443222222799**********************************987369******************998751156******9987 PP AA1_1.hmm 252 gk 253 WAQ88008.1|AA1 208 DC 209 65 PP == domain 2 score: -3.3 bits; conditional E-value: 0.86 AA1_1.hmm 84 kvpdqaGtfwYHshlstqycdglrGalvvy 113 ++d G++ H h+ g G +vv WAQ88008.1|AA1 523 ILADIPGAWIMHCHIGWHIAGGFAGIVVVQ 552 55778899999******9999999999885 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (583 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 138.38 // Query: 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 [L=557] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.4e-61 197.1 0.0 4.5e-50 159.2 1.2 2.5 2 AA1.hmm 3.9e-42 132.5 3.2 9.3e-40 124.7 3.3 3.6 3 AA1_2.hmm 8e-42 131.5 4.2 7.5e-41 128.3 2.0 2.8 3 AA1_3.hmm 3.8e-35 109.5 0.3 2.3e-34 106.9 0.3 2.0 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 159.2 1.2 4.5e-50 4.5e-50 7 213 .. 76 265 .. 65 269 .. 0.87 2 ! 34.2 0.0 4.5e-12 4.5e-12 240 353 .. 271 556 .. 266 556 .. 0.78 Alignments for each domain: == domain 1 score: 159.2 bits; conditional E-value: 4.5e-50 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrq 53 + ++v+++N+q+PgP+ie+negD++++tV+N++ s g+tiHwhG 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 76 YFKPVLAINNQIPGPLIEVNEGDQLEITVVNRM-SLGLTIHWHG--- 118 56899***************************9.79*******9... PP AA1.hmm 54 lgtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqy 99 +tqcpi+p g ++tY+f++t H+H + 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 119 -----------ITQCPIPPhGGQYTYKFKIT-------EHAHQQNFM 147 ...........589*****9**********9.......7******** PP AA1.hmm 100 adGlrGaliirdpks..kekydvddeelvillsdwyhktaeell... 141 adG+ G++i+++ ++ k+++d+d +e+v++l+dwyh+t+e+++ 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 148 ADGISGPFIVHSIRDplKRSVDFD-QEVVLFLADWYHNTSETIVhnm 193 ***********7422224489999.899****************999 PP AA1.hmm 142 ...ken..atgaepapdsllinGkgrlyncssklevlkvepgktyrl 183 k t a+p p+s+linG + +s+ ++++ +g+t r+ 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 194 lteK-GyyGTPAAPSPNSALINGCVQ---KKSH-IQFNFVAGETIRF 235 8642.2357778888********965...2334.38*********** PP AA1.hmm 184 rlinaalnaeltfsidnHkltvieaDgvyv 213 rlin a++a++++s+d+H+l+v eaD++ v 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 236 RLINGASHAMFYYSVDEHTLNVTEADATGV 265 **************************9865 PP == domain 2 score: 34.2 bits; conditional E-value: 4.5e-12 AA1.hmm 240 gnywiraslds...a...afdnttalailrYkgassas......... 271 +n+ +ra++ds a + + tal+i++ + s+++ 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 271 KNFFMRAQMDSdcwAwvaNDAELTALGIINLIDGSEKHhtsveleds 317 68899998888665244433677888888885544444467888888 PP AA1.hmm 272 ............................................... 271 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 318 lprtidwkdemggecadlnssslkpilpsrvpkvavgtgtlanafgf 364 88888888888899999999999999999999999999999999999 PP AA1.hmm 272 ............................................... 271 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 365 qviltgelvprgaastpsnatfangqnpssngssprrlvkkqvqigd 411 99999999999999999999999999999999999999999999999 PP AA1.hmm 272 .....................................nvsf.vepst 280 n+++ + p + 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 412 ddgsnipngksseqagisriggppptpvgtigkffvnNITWlTAPYQ 458 99999999999999999999999999999999999998888677888 PP AA1.hmm 281 slleay..sgv...detka....klkln.................hp 301 ++l+++ sg ++t+ + hp 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 459 PILHDLigSGAgevNQTRVssvtF---HtpewydlhivnldpalsHP 502 888885362224445555564440...244455555556677788** PP AA1.hmm 302 ..lhghdfvvvnfdaedeakrdtv.avpkggwvvirfvadnpgvwll 345 lh +d+++v + + + +++t + + + +v+r+ +d pgvw+l 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 503 yhLHAMDMHLVAQGKGVP-NKETLfEIRPASFAVVRILTDIPGVWIL 548 ***********6555444.4555559********************* PP AA1.hmm 346 hchieaHl 353 hchi +Hl 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 549 HCHIGWHL 556 *******6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 124.7 3.3 9.3e-40 9.3e-40 2 200 .. 78 265 .. 77 273 .. 0.92 2 ? 0.5 0.0 0.053 0.053 227 262 .. 270 305 .. 267 326 .. 0.76 3 ? 1.7 0.0 0.024 0.024 152 194 .. 472 514 .. 381 527 .. 0.86 Alignments for each domain: == domain 1 score: 124.7 bits; conditional E-value: 9.3e-40 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqng 48 ++v+++N+q P p ievn+gd++e+++ N++ ++H+HG 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 78 KPVLAINNQIPGPLIEVNEGDQLEITVVNRM-SLGLTIHWHG----- 118 6899***************************.7899*****9..... PP AA1_2.hmm 49 tnamDGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeD 94 +tqCpipp g ++tY+f+++ H+H+++ D 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 119 ---------ITQCPIPPhGGQYTYKFKIT-------EHAHQQNFMAD 149 .........69****984689*******3.......5********** PP AA1_2.hmm 95 Glrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk 137 G+ gp+i++ ++p ++d+e++l l+dwYh++s+++v+++l++ 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 150 GISGPFIVHSIRDPLkrsvDFDQEVVLFLADWYHNTSETIVHNMLTE 196 *********9887776777************************9999 PP AA1_2.hmm 138 ..ynptgaepipdsllv....netenatlevepgktYllriinvgaf 178 y t a p p+s+l+ ++++++++++ +g+t ++r+in + 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 197 kgYYGTPAAPSPNSALIngcvQKKSHIQFNFVAGETIRFRLINGASH 243 566778899********777778999********************* PP AA1_2.hmm 179 asqylvledhemtivevDGvdv 200 a++y ++++h++++ e+D++ v 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 244 AMFYYSVDEHTLNVTEADATGV 265 ******************9876 PP == domain 2 score: 0.5 bits; conditional E-value: 0.053 AA1_2.hmm 227 sknyalvakmdetmldvvpddlqlnvtstlvydksa 262 kn+ + a+md++ + v++d +l + ++ + 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 270 GKNFFMRAQMDSDCWAWVANDAELTALGIINLIDGS 305 58*****************99999988777654444 PP == domain 3 score: 1.7 bits; conditional E-value: 0.024 AA1_2.hmm 152 vnetenatlevepgktYllriinvgafasqylvledhemtive 194 vn+t+ ++++++ + Y l+i+n+ s+ +l +m++v 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 472 VNQTRVSSVTFHTPEWYDLHIVNLDPALSHPYHLHAMDMHLVA 514 5999999999*************99999999999999888875 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 128.3 2.0 7.5e-41 7.5e-41 9 237 .. 55 265 .. 50 271 .. 0.88 2 ? 1.6 0.0 0.028 0.028 263 291 .. 270 300 .. 266 317 .. 0.69 3 ? -3.9 0.0 1.3 1.3 191 213 .. 474 496 .. 468 515 .. 0.68 Alignments for each domain: == domain 1 score: 128.3 bits; conditional E-value: 7.5e-41 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtle 55 + +v r y++ vt++t+a DG+ k++l++n+q+Pgp+ie + GD+le 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 55 DVSVKRVYKFIVTNTTAALDGYFKPVLAINNQIPGPLIEVNEGDQLE 101 67899****************************************** PP AA1_3.hmm 56 vtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftY 101 +tv+n+++ G +iHwHG +tqCpi+p g ++tY 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 102 ITVVNRMS-LGLTIHWHG--------------ITQCPIPPhGGQYTY 133 ******98.8*******7..............69****99789**** PP AA1_3.hmm 102 efratqyGtswYHsHyslQyadGvlGplvinG...Pasanydvdlg. 144 +f++t+ H+H + +adG+ Gp +++ P + + d d + 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 134 KFKITE------HAHQQNFMADGISGPFIVHSirdPLKRSVDFDQEv 174 ****99......99**************9875444877777777751 PP AA1_3.hmm 145 pllltdwshesafelveeae......asggppvadniLingknkvkk 185 +l+l+dw+h++ +++v+++ + ++p+ ++ Ling + k+ 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 175 VLFLADWYHNTSETIVHNMLtekgyyGTPAAPSPNSALINGCVQKKS 221 5789*************9996666544556699999****9766555 PP AA1_3.hmm 186 skkeeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaa 232 ++++ +g++ r+rlin +++++f +s+d+H+l+v +a 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 222 --------HIQFNFVAGETIRFRLINGASHAMFYYSVDEHTLNVTEA 260 ........799************************************ PP AA1_3.hmm 233 Dfvpi 237 D + 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 261 DATGV 265 *8766 PP == domain 2 score: 1.6 bits; conditional E-value: 0.028 AA1_3.hmm 263 eenywlraelaeaCskl..naeekeikailr 291 +n+++ra+++++C ++ n+ e ++ +i++ 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 270 GKNFFMRAQMDSDCWAWvaNDAELTALGIIN 300 689***********99822344444555655 PP == domain 3 score: -3.9 bits; conditional E-value: 1.3 AA1_3.hmm 191 egeysevklekgkkyrlrlints 213 +++ s+v++++ + y l+++n 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 474 QTRVSSVTFHTPEWYDLHIVNLD 496 56677888888888999998864 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 106.9 0.3 2.3e-34 2.3e-34 3 214 .. 73 265 .. 71 278 .. 0.90 Alignments for each domain: == domain 1 score: 106.9 bits; conditional E-value: 2.3e-34 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsi 49 DG+ + + +n+++pgpli ++gd+++i+vvn+ m +i 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 73 LDGYFKPVLAINNQIPGPLIEVNEGDQLEITVVNR-----MSLGLTI 114 6********************************96.....678999* PP AA1_1.hmm 50 hwhglfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYH 95 hwhg+ tqCPi p g +++y+fk+++ H 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 115 HWHGI--------------TQCPIPPhGGQYTYKFKITE-------H 140 ***95..............89***996789*******77.......8 PP AA1_1.hmm 96 shlstqycdglrGalvvydpedplkslydvddestvitladwyhtaa 142 +h ++ + dg+ G+++v+ +dplk+ d+d+e v+ ladwyh+++ 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 141 AHQQNFMADGISGPFIVHSIRDPLKRSVDFDQE-VVLFLADWYHNTS 186 9*****************************987.699********** PP AA1_1.hmm 143 kell............klvavadstlinGlgryaggpeaelavvnve 177 +++ +++ ++s+linG + ++ + n 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 187 ETIVhnmltekgyygtPAAPSPNSALINGCVQKKSH-----IQFNFV 228 *99989999999997777799********9776554.....445667 PP AA1_1.hmm 178 kgkrYrfrlvsiscdpnftfsidghnltvieadgvnt 214 +g+ rfrl++ ++++ f +s+d+h+l+v ead++ + 4194274|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 229 AGETIRFRLINGASHAMFYYSVDEHTLNVTEADATGV 265 89*******************************9865 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (557 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 40.67 // Query: 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 [L=678] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.7e-99 320.7 0.0 4.6e-99 320.4 0.0 1.1 1 AA1.hmm 5.5e-74 237.2 0.9 1.8e-73 235.5 0.5 1.8 2 AA1_3.hmm 7.4e-70 223.6 0.1 4.7e-68 217.7 0.1 2.7 3 AA1_2.hmm 1.2e-69 222.8 0.1 3e-69 221.5 0.2 1.6 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 320.4 0.0 4.6e-99 4.6e-99 6 357 .. 47 631 .. 42 632 .. 0.86 Alignments for each domain: == domain 1 score: 320.4 bits; conditional E-value: 4.6e-99 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlr 52 + + r+v+++N+q+PgP+ie+negD ++vtV+N+ ++tiHwhGl 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 47 TaapdgFLRTVLAINNQIPGPLIEVNEGDSLEVTVVNHS-GGPLTIHWHGLY 97 4445556799****************************4.69********** PP AA1.hmm 53 qlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlr 104 q+gtnw+DG+ g+tqcpia+g s+tY+ftv++q Gt+wyH+H adG++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 98 QNGTNWEDGPTGITQCPIAAGISYTYKFTVDNQFGTFWYHAHALNTMADGIH 149 **************************************************** PP AA1.hmm 105 Galiirdpkske....kydvddeelvillsdwyhktaeell.......ken. 144 G+li+++ ++ d+d ee v++l+dwyh+t+++++ k 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 150 GPLIVHST--RDplvrGIDFD-EEAVLVLADWYHNTSAQIIhdmfytdK-Gy 197 ******65..33467789998.888****************99999643.23 PP AA1.hmm 145 .atgaepapdsllinGkgrlync.....s......sklevlkvepgktyrlr 184 t ++p p+s+++nG g+ +c + + l +++v +g++ r+r 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 198 fGTPGTPSPNSVVMNGVGEW-DCkyattQqfckptTVLPEFSVAAGNKIRFR 248 67777888**********96.674655415554556677************* PP AA1.hmm 185 linaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllka 235 lin +++++l+fs d+H l+v eaD+++v+ p +v+ l+ + Gqry+v+++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 249 LINSGSHSMLFFSADEHALNVTEADATPVHgPSKVHRLKFHNGQRYSVIVTI 300 ****************************9769*******************7 PP AA1.hmm 236 nqsa..gnywiraslds...a....afdnttalailrYkg......assas. 271 ++++ ++++iras d+ a + +tta++i+r + + + 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 301 DSKEagNSFYIRASADTdcwAwvsaD-LQTTARGIVRVAKpgktlsS---Kd 348 7777656******8888676255544.57899******886666551...14 PP AA1.hmm 272 .................................................... 271 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 349 kqvrpnskdwsdpangpcvdldpdllspiipqevpttvagsgqfanafgfvs 400 567778889999999************************************* PP AA1.hmm 272 .................................................... 271 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 401 vlegekvanpppppsppsgtgnprntgitrnttgaskalgsdseislgasls 452 **************************************************** PP AA1.hmm 272 .................................................... 271 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 453 tsdipiilkrqistgvdsasipagtaalppnftvipglptipreargaffvn 504 ********************************99999999999999999999 PP AA1.hmm 272 nvsf.vepstslleay..sgv..........detkaklkln........... 299 nv++ + p +++++++ gv 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 505 NVTWaTYPYQPIMHDLapGGVgkvnsdrvanV--------Vyptedwydlyl 548 99996678888888843533354433222220........133445555555 PP AA1.hmm 300 ........hp..lhghdfvvv...............nfdaedeakrdtvavp 326 h lhg+d+++v +++++++ +rdt+a+ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 549 vnmdpalaHAyhLHGMDMHIVaigqgqptpeslaklDYNTKNPLRRDTIAIA 600 566677778899*********999888887777766666999999******* PP AA1.hmm 327 kggwvvirfvadnpgvwllhchieaHlsmGl 357 +g vv r+ +d pgvw++hch+ +Hl++G 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 601 AGTFVVARLFTDLPGVWAMHCHFGWHLAIGF 631 *****************************97 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 235.5 0.5 1.8e-73 1.8e-73 9 297 .. 32 342 .. 26 356 .. 0.88 2 ? -1.2 0.0 0.21 0.21 109 141 .. 615 647 .. 598 662 .. 0.78 Alignments for each domain: == domain 1 score: 235.5 bits; conditional E-value: 1.8e-73 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvkn 60 + vtr+y++ +t++t+apDG+ +++l++n+q+Pgp+ie + GD+levtv+n 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 32 SDKVTRKYEFVITNTTAAPDGFLRTVLAINNQIPGPLIEVNEGDSLEVTVVN 83 5679************************************************ PP AA1_3.hmm 61 nlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGts 111 + +iHwHG+ q+ tn++DG +g+tqCpia g s+tY+f+++ q+Gt 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 84 HSG-GPLTIHWHGLYQNGTNWEDGPTGITQCPIAAGISYTYKFTVDnQFGTF 134 865.5689************************************9549**** PP AA1_3.hmm 112 wYHsHyslQyadGvlGplvinG...Pasanydvdl.gpllltdwshesafel 159 wYH+H +adG+ Gpl+++ P d d +l+l+dw+h++ ++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 135 WYHAHALNTMADGIHGPLIVHStrdPLVRGIDFDEeAVLVLADWYHNTSAQI 186 ********************973335555666665256789**********9 PP AA1_3.hmm 160 veeae.......asggppvadniLingknkvkkskk......eeegeysevk 198 ++++ + g+p+ +++++ng ++++++ + + ++ e++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 187 IHDMFytdkgyfGTPGTPSPNSVVMNGVGEWDCKYAttqqfcKPTTVLPEFS 238 999987777766677789***************88888888777888899** PP AA1_3.hmm 199 lekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligi 249 + +g+k r+rlin++++s++ fs d+H l+v +aD p++ p +++ l + 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 239 VAAGNKIRFRLINSGSHSMLFFSADEHALNVTEADATPVHgPSKVHRLKFHN 290 ***************************************86999******** PP AA1_3.hmm 250 gqRydviveanqe..eenywlraelaeaCskl..naeekeikailrYeeass 297 gqRy viv+ +++ +++++ra+ +++C ++ ++ ++++++i+r ++ + 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 291 GQRYSVIVTIDSKeaGNSFYIRASADTDCWAWvsADLQTTARGIVRVAKPGK 342 ********9998877999***********99732356677888888766554 PP == domain 2 score: -1.2 bits; conditional E-value: 0.21 AA1_3.hmm 109 GtswYHsHyslQyadGvlGplvinGPasanydv 141 G H H+ a G +G +v++ + a++ + 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 615 GVWAMHCHFGWHLAIGFAGVVVVQPDKIAKFKI 647 66678*****************99888888766 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 217.7 0.1 4.7e-68 4.7e-68 2 257 .. 55 336 .. 54 360 .. 0.92 2 ? 2.2 0.0 0.017 0.017 153 195 .. 529 571 .. 464 586 .. 0.81 3 ? -0.7 0.0 0.12 0.12 79 110 .. 614 646 .. 601 657 .. 0.81 Alignments for each domain: == domain 1 score: 217.7 bits; conditional E-value: 4.7e-68 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamD 53 r+v+++N+q P p ievn+gd++ev++ N+ + ++H+HGl+qngtn+ D 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 55 RTVLAINNQIPGPLIEVNEGDSLEVTVVNHS-GGPLTIHWHGLYQNGTNWED 105 899**************************98.66999*************** PP AA1_2.hmm 54 GasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedk 105 G++++tqCpi+ g ++tY+ftv++q Gt+WyH+H+ + DG+ gpli++ + 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 106 GPTGITQCPIAAGISYTYKFTVDNQFGTFWYHAHALNTMADGIHGPLIVHST 157 **************************************************** PP AA1_2.hmm 106 eepy....eydeeltltlsdwYheeskelvke.flsk..ynptgaepipdsl 150 ++p ++dee +l+l+dwYh++s +++++ f + y t p p+s+ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 158 RDPLvrgiDFDEEAVLVLADWYHNTSAQIIHDmFYTDkgYFGTPGTPSPNSV 209 *9988999**********************996666644556677899**** PP AA1_2.hmm 151 lv..................netenatlevepgktYllriinvgafasqylv 184 ++ +t +++v +g++ ++r+in g ++ +++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 210 VMngvgewdckyattqqfckPTTVLPEFSVAAGNKIRFRLINSGSHSMLFFS 261 ****************99987788889************************* PP AA1_2.hmm 185 ledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalva 234 ++h +++ e+D++ v+ ps+v+ l+ +QRysv+v+ ++ + +++ + a 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 262 ADEHALNVTEADATPVHgPSKVHRLKFHNGQRYSVIVTIDSKeAGNSFYIRA 313 ****************86788*****************998835588***** PP AA1_2.hmm 235 kmdetmldvvpddlqlnvtstlv 257 + d++ + v +dlq+ + ++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 314 SADTDCWAWVSADLQTTARGIVR 336 **************998877665 PP == domain 2 score: 2.2 bits; conditional E-value: 0.017 AA1_2.hmm 153 netenatlevepgktYllriinvgafasqylvledhemtivev 195 n+ + a++ ++ Y l ++n+ ++ +l + +m+iv + 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 529 NSDRVANVVYPTEDWYDLYLVNMDPALAHAYHLHGMDMHIVAI 571 555555666667788**************************87 PP == domain 3 score: -0.7 bits; conditional E-value: 0.12 AA1_2.hmm 79 vGtYWyHsHskgqYeDGlrgpliiedke.epye 110 G + +H+H + + G+ g++++++++ ++++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 614 PGVWAMHCHFGWHLAIGFAGVVVVQPDKiAKFK 646 688889*******************99855555 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 221.5 0.2 3e-69 3e-69 2 253 .. 49 319 .. 48 349 .. 0.89 2 ? -2.7 0.0 0.53 0.53 178 209 .. 540 571 .. 524 585 .. 0.69 Alignments for each domain: == domain 1 score: 221.5 bits; conditional E-value: 3e-69 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 +pDGf r++ +n+++pgpli ++gd+++++vvn+ +ihwhg 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 49 APDGFLRTVLAINNQIPGPLIEVNEGDSLEVTVVNHSG-----GPLTIHWHG 95 7*********************************9755.....4578***** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdg 105 l+q+gtnw+dgp+ +tqCPia+g s++y+f+v++q GtfwYH+h + + dg 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 96 LYQNGTNWEDGPTGITQCPIAAGISYTYKFTVDNQFGTFWYHAHALNTMADG 147 **************************************************** PP AA1_1.hmm 106 lrGalvvydpedplkslydvddestvitladwyhtaakell........... 146 ++G+l+v+ +dpl + d+d+e v+ ladwyh+++ ++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 148 IHGPLIVHSTRDPLVRGIDFDEE-AVLVLADWYHNTSAQIIhdmfytdkgyf 198 ********************865.799**********99999999**99999 PP AA1_1.hmm 147 ..klvavadstlinGlgryagg.........peaelavvnvekgkrYrfrlv 187 ++ ++s ++nG+g + + p++ l +v++g++ rfrl+ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 199 gtPGTPSPNSVVMNGVGEWDCKyattqqfckPTTVLPEFSVAAGNKIRFRLI 250 877789***********9874434446666678888899************* PP AA1_1.hmm 188 siscdpnftfsidghnltvieadgvn.tkpltvdsiqifagqrysvvleanq 238 + +++ fs d+h l+v ead++ + p +v++++ gqrysv+++ + 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 251 NSGSHSMLFFSADEHALNVTEADATPvHGPSKVHRLKFHNGQRYSVIVTIDS 302 ************************983569*****************99876 PP AA1_1.hmm 239 e..vdnYwiranpnlgk 253 + + ++ira+ ++ 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 303 KeaGNSFYIRASADTDC 319 5114579****988765 PP == domain 2 score: -2.7 bits; conditional E-value: 0.53 AA1_1.hmm 178 kgkrYrfrlvsiscdpnftfsidghnltviea 209 ++ Y + lv++ + + + g +++++ + 90956|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 540 TEDWYDLYLVNMDPALAHAYHLHGMDMHIVAI 571 45568888888888888888888888888765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (678 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 133.59 // Query: 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 [L=665] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.5e-100 325.3 0.1 2e-100 324.9 0.1 1.2 1 AA1.hmm 5.6e-79 253.6 0.2 8e-79 253.1 0.2 1.1 1 AA1_3.hmm 3.1e-74 238.0 0.0 5.1e-74 237.3 0.0 1.3 1 AA1_2.hmm 1.8e-69 222.2 0.0 2.8e-69 221.5 0.0 1.3 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 324.9 0.1 2e-100 2e-100 7 353 .. 73 664 .. 62 664 .. 0.82 Alignments for each domain: == domain 1 score: 324.9 bits; conditional E-value: 2e-100 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtn 57 + r+v+++Ngq+PgP+ieanegD++++tV+N++ s g+t+HwhG+ q+gtn 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 73 FLRPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQNGTN 122 6799****************************9.79*************** PP AA1.hmm 58 waDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGal 107 w+DGv gvtqcpi++ g sftY+f +++q Gt+wyHsH++ adG+ G+l 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 123 WEDGVTGVTQCPIPAdGGSFTYTFDLHGQFGTFWYHSHHQNLMADGINGPL 173 *************989*********************************** PP AA1.hmm 108 iirdpks..kekydvddeelvillsdwyhktaeell....ken...atgae 149 ii++p++ k+++d+d +++v++l+dwyh+t+++++ +e+ t a+ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 174 IIHSPRDplKRHVDFD-QDVVLILADWYHNTSTDIVehmlSEAgyfGTPAA 223 ***9966444489998.889***************9888833343456666 PP AA1.hmm 150 papdsllinGkgrlyncs...........sklevlkvepgktyrlrlinaa 189 p p+s+linG g+ ncs ++ ++++++g + r+rlina+ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 224 PGPNSALINGIGEW-NCSqaskaqqckqiNPPPEFTFKAGDKIRFRLINAG 273 66**********97.563344455554555556****************** PP AA1.hmm 190 lnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa 239 ++a++++s+d+H+l+v eaDg+ v p ++ + ++ Gqry+v++k+++++ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 274 VHAMFFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRYSVVIKTKKED 324 *********************99854899*****************98888 PP AA1.hmm 240 ..gnywiraslds...a....afdnttalailrYkgassas.......... 271 +++++ra++ds a + + t+ +ilr +++s+ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 325 agKSFYLRATMDSdcwAwvpdD-IQLTGFGILRLVDDESKIkkisqsqtrp 374 777******9999766255644.57899******77433325677777889 PP AA1.hmm 272 ................................................... 271 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 375 qtkdwpdeilgdcidlptsslvpilkesvpnsvvgsgsfkagfgfqfinnt 425 999************************************************ PP AA1.hmm 272 ................................................... 271 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 426 alhltraqavklaqkvnasslslttnprteelqttndtasflrngtartll 476 ******999999999999999999999999888888888888888888888 PP AA1.hmm 272 ................................................... 271 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 477 narsksveglwnldesesltalakrqvsvgqknlppgnrtnmlgitrtggp 527 888888888887777777777777777777777777777777777777777 PP AA1.hmm 272 ..............nvsf.vepstslleay..sgvdetkaklkln...... 299 n+s+ + p ++l+++ + 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 528 pptpagtigkfflnNISWtTYPYRPVLHDLtpG-----------Gvgtvng 567 777777777777776666445566666663232...........0222333 PP AA1.hmm 300 ..........................hp..lhghdfvvv............ 310 hp lh +d+++v 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 568 snvanviyptsewydlylanidpagsHPyhLHAMDMHIVaegkglptpenl 618 33333345555666666777888899*************877777766655 PP AA1.hmm 311 ...nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHl 353 ++++ ++ +rdt++vp+ + +vir++ad pg w++hchi +H+ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 619 akvSYNTANPLRRDTIVVPPASFTVIRLRADIPGAWIVHCHIGWHM 664 544444777777*********************************8 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 253.1 0.2 8e-79 8e-79 8 280 .. 51 343 .. 46 377 .. 0.86 Alignments for each domain: == domain 1 score: 253.1 bits; conditional E-value: 8e-79 AA1_3.hmm 8 pktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtv 58 ++ +tr+yt++vtest+a DG+ +++l++ngq+Pgp+iea+ GD+le+tv 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 51 TDKPKTRKYTFHVTESTAALDGFLRPVLAINGQIPGPLIEANEGDHLEITV 101 56789********************************************** PP AA1_3.hmm 59 knnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefrat.q 107 +n+++ G ++HwHGi q+ tn++DGv+gvtqCpi+ g sftY+f + q 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 102 VNQMS-VGLTLHWHGIYQNGTNWEDGVTGVTQCPIPAdGGSFTYTFDLHgQ 151 ***98.8****************************75499******9755* PP AA1_3.hmm 108 yGtswYHsHyslQyadGvlGplvinGP.....asanydvdlgpllltdwsh 153 +Gt wYHsH++ +adG+ Gpl+i+ P + ++d+d+ +l+l+dw+h 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 152 FGTFWYHSHHQNLMADGINGPLIIHSPrdplkRHVDFDQDV-VLILADWYH 201 **************************954433346677665.6789***** PP AA1_3.hmm 154 esafelveeae......asggppvadniLingknkvkkskk......eeeg 192 ++ +++ve++ + ++p ++ Ling +++++s++ ++ + 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 202 NTSTDIVEHMLseagyfGTPAAPGPNSALINGIGEWNCSQAskaqqcKQIN 252 ******9999877765555667899*************9986654444444 PP AA1_3.hmm 193 eysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pytt 242 e+++++g k r+rlin++v+++f +s+d+H+l+v +aD + p 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 253 PPPEFTFKAGDKIRFRLINAGVHAMFFYSVDEHTLNVTEADGTGVYgPPAL 303 45569***************************************9658899 PP AA1_3.hmm 243 dslligigqRydviveanqe..eenywlraelaeaCskln 280 + ++++ gqRy v++++++e ++++lra+++++C ++ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 304 HRVWLHNGQRYSVVIKTKKEdaGKSFYLRATMDSDCWAWV 343 ******************998899************9863 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 237.3 0.0 5.1e-74 5.1e-74 2 268 .. 75 367 .. 74 389 .. 0.92 Alignments for each domain: == domain 1 score: 237.3 bits; conditional E-value: 5.1e-74 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnam 52 r+v+++Ngq P p ie+n+gd++e+++ N++ +lH+HG++qngtn+ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 75 RPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQNGTNWE 124 899****************************.8899*************** PP AA1_2.hmm 53 DGasmvtqCpip.pgetltYeftveeqvGtYWyHsHskgqYeDGlrgplii 102 DG+++vtqCpip +g ++tY+f+++ q Gt+WyHsH+++ DG+ gplii 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 125 DGVTGVTQCPIPaDGGSFTYTFDLHGQFGTFWYHSHHQNLMADGINGPLII 175 ***********845899********************************** PP AA1_2.hmm 103 edkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepip 147 + +++p ++d++++l+l+dwYh++s+++v+++ls+ y t a p p 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 176 HSPRDPLkrhvDFDQDVVLILADWYHNTSTDIVEHMLSEagYFGTPAAPGP 226 **997776777***************************9666778899*** PP AA1_2.hmm 148 dsllv..................netenatlevepgktYllriinvgafas 180 +s+l+ + + ++++++g + ++r+in g+ a+ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 227 NSALIngigewncsqaskaqqckQINPPPEFTFKAGDKIRFRLINAGVHAM 277 ******************9998877778899******************** PP AA1_2.hmm 181 qylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tskn 229 ++ ++++h++++ e+DG+ v p + + + +QRysv++k+k++ + k+ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 278 FFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRYSVVIKTKKEdAGKS 328 ******************9972556899***************997366** PP AA1_2.hmm 230 yalvakmdetmldvvpddlqlnvtstlvydksaalaeas 268 + l a+md++ + vpdd+ql l+ +++++ ++ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 329 FYLRATMDSDCWAWVPDDIQLTGFGILRLVDDESKIKKI 367 *********************999998877766665554 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 221.5 0.0 2.8e-69 2.8e-69 3 251 .. 70 337 .. 68 361 .. 0.88 Alignments for each domain: == domain 1 score: 221.5 bits; conditional E-value: 2.8e-69 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 DGf r + +ng++pgpli +++gd+++i+vvn+ m ++hwhg 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 70 LDGFLRPVLAINGQIPGPLIEANEGDHLEITVVNQ-----MSVGLTLHWHG 115 6********************************97.....668899***** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqyc 103 ++q+gtnw+dg++ vtqCPi + g sf+y+f++++q GtfwYHsh+++ + 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 116 IYQNGTNWEDGVTGVTQCPIPAdGGSFTYTFDLHGQFGTFWYHSHHQNLMA 166 ********************65489************************** PP AA1_1.hmm 104 dglrGalvvydpedplkslydvddestvitladwyhtaakell........ 146 dg+ G+l+++ p+dplk+ d+d++ v+ ladwyh++++++ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 167 DGINGPLIIHSPRDPLKRHVDFDQD-VVLILADWYHNTSTDIVehmlseag 216 **********************976.6899**********99989999999 PP AA1_1.hmm 147 ....klvavadstlinGlgryagg...peaelavvn......vekgkrYrf 184 +++ ++s+linG+g ++ + ++++ +n ++g + rf 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 217 yfgtPAAPGPNSALINGIGEWNCSqasKAQQCKQINpppeftFKAGDKIRF 267 998777799***********9955122333344443222222899****** PP AA1_1.hmm 185 rlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvl 234 rl++ ++ f +s+d+h+l+v eadg+ + p +++ + gqrysvv+ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 268 RLINAGVHAMFFYSVDEHTLNVTEADGTGVyGPPALHRVWLHNGQRYSVVI 318 ***************************97636999**************** PP AA1_1.hmm 235 eanqe..vdnYwiranpnl 251 ++++e + +++ra++++ 1132|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 319 KTKKEdaGKSFYLRATMDS 337 9987621468999998876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (665 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 115.52 // Query: 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 [L=658] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.8e-99 321.1 0.0 3.8e-99 320.6 0.0 1.1 1 AA1.hmm 1e-75 242.9 0.4 2.9e-75 241.4 0.1 1.7 2 AA1_3.hmm 2.1e-71 228.7 0.1 6.3e-70 223.9 0.0 2.3 2 AA1_2.hmm 3.6e-68 217.9 0.1 7.5e-68 216.9 0.0 1.5 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 320.6 0.0 3.8e-99 3.8e-99 7 357 .. 62 617 .. 51 618 .. 0.80 Alignments for each domain: == domain 1 score: 320.6 bits; conditional E-value: 3.8e-99 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnw 58 + rsv+++N+q+PgP+ieanegD++++tV N+l + +tiHwhGl q+gtn 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 62 FLRSVLAINDQIPGPLIEANEGDHLEITVINNL-DSALTIHWHGLYQNGTNS 112 5689*****************************.689*************** PP AA1.hmm 59 aDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGalii 109 +DGv gvtqcpi+p g +tY+f++t+q Gt+wyH+H++ adGl+G+lii 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 113 EDGVTGVTQCPIPPsGGRYTYKFQLTGQFGTFWYHAHHQNLLADGLYGPLII 164 **************9************************************* PP AA1.hmm 110 rdpks..kekydvddeelvillsdwyhktaeell......ken.atgaepap 152 ++p++ k+ d+d +++v++++dwyh+t++e+l ++ t a+p p 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 165 HSPRDpiKRGIDFD-QDVVLMIADWYHNTSSEILknmlsePGYfGTPAAPSP 215 *9965444489988.889****************88875422257778888* PP AA1.hmm 153 dsllinGkgrlync......s......sklevlkvepgktyrlrlinaalna 192 +s+++nG g+ +c ++l +++v gk+ r+r+in +++a 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 216 NSVIMNGIGNW-DCdrfatiHercekiNSLPIFNVIGGKKIRFRIINSGSHA 266 *********96.6755555414555677788********************* PP AA1.hmm 193 eltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gn 241 +++fs d+H+l+v eaD ++v p +v+ ++++ Gqry+v++++++++ ++ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 267 MIYFSGDEHSLNVTEADSTPVYgPSSVHRIKLHNGQRYSVIIDTQEKEvgSS 318 ********************9659*******************88888766* PP AA1.hmm 242 ywiraslds...a....afdnttalailrYkg.....assas.......... 271 +++r ++d+ a + ++t+l+i+r + + s 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 319 FYVRGTIDTdcfAwvagD-LQKTGLGIVRVVKagediK---Sskeitipntk 366 *****9999666255544.57899******87555542...15567788888 PP AA1.hmm 272 .................................................... 271 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 367 dwsdktdgscvdldpeslypilpidvpetvagsgtltnafgfqviatgasip 418 899999999999999999*****************************99999 PP AA1.hmm 272 .................................................... 271 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 419 rdqasklssrprsissyssstsqispikrrqmkldstrsalplgtatsppvk 470 9999999999887777777666666666666666666666666666666666 PP AA1.hmm 272 ....................nvsf.vepstslleaysgvdetkaklkln... 299 +vs+ + p +++l++ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 471 idqegppptptgargvffvnDVSWkTYPYQPVLHD-------------Llpg 509 66666666666666666555555533444555554.............0333 PP AA1.hmm 300 .................................hp..lhghdfvvv...... 310 hp lh +d+++v 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 510 gggsldnseianvvyptaewydlylvnmdpaisHPyhLHAMDMHLVafgkgm 561 333333334444445555666677777778888*************666666 PP AA1.hmm 311 .....nfd.....aedeakrdtvavpkggwvvirfvadnpgvwllhchieaH 352 + ++++ +rdt+++++ +++v+r++ad pgvw++hchi +H 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 562 ptpenL-SklkyrTKNPLRRDTIVIEAASYAVVRVMADIPGVWIMHCHIGWH 612 555540.144455777777********************************* PP AA1.hmm 353 lsmGl 357 l+ G 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 613 LAGGF 617 *9997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 241.4 0.1 2.9e-75 2.9e-75 9 293 .. 41 348 .. 36 366 .. 0.87 2 ? -1.4 0.0 0.23 0.23 109 140 .. 601 632 .. 586 643 .. 0.82 Alignments for each domain: == domain 1 score: 241.4 bits; conditional E-value: 2.9e-75 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvkn 60 ++++tr++++ t++ ++pDG+ +++l++n+q+Pgp+iea+ GD+le+tv n 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 41 SNAITRKFEFVCTKKVASPDGFLRSVLAINDQIPGPLIEANEGDHLEITVIN 92 6789************************************************ PP AA1_3.hmm 61 nlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefrat.qyGt 110 nl+ + +iHwHG+ q+ tn++DGv+gvtqCpi+p g +tY+f+ t q+Gt 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 93 NLD-SALTIHWHGLYQNGTNSEDGVTGVTQCPIPPsGGRYTYKFQLTgQFGT 143 **8.6899*************************996889******8769*** PP AA1_3.hmm 111 swYHsHyslQyadGvlGplvinGPas.....anydvdlgpllltdwshesaf 157 wYH+H++ adG++Gpl+i+ P ++d+d+ +l+++dw+h++ + 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 144 FWYHAHHQNLLADGLYGPLIIHSPRDpikrgIDFDQDV-VLMIADWYHNTSS 194 ***********************954222225677775.6899********* PP AA1_3.hmm 158 elveeae......asggppvadniLingknkvkkskk.......eeegeyse 196 e+++++ + ++p+ +++++ng +++++++ e+ ++ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 195 EILKNMLsepgyfGTPAAPSPNSVIMNGIGNWDCDRFatihercEKINSLPI 246 ****99987876656677999*************877888876656666667 PP AA1_3.hmm 197 vklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslli 247 +++ gkk r+r+in+++++++ fs d+H+l+v +aD p+ p +++ + + 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 247 FNVIGGKKIRFRIINSGSHAMIYFSGDEHSLNVTEADSTPVYgPSSVHRIKL 298 99***************************************65999****** PP AA1_3.hmm 248 gigqRydviveanqe..eenywlraelaeaCskln..aeekeikailrYe 293 + gqRy vi++++++ +++++r +++++C ++ + +k+ +i+r 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 299 HNGQRYSVIIDTQEKevGSSFYVRGTIDTDCFAWVagDLQKTGLGIVRVV 348 *************999999************9975224445555666655 PP == domain 2 score: -1.4 bits; conditional E-value: 0.23 AA1_3.hmm 109 GtswYHsHyslQyadGvlGplvinGPasanyd 140 G H H+ a G +G ++++ + ++++ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 601 GVWIMHCHIGWHLAGGFAGVIIVQPNKIKQFQ 632 77788****************99877766665 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 223.9 0.0 6.3e-70 6.3e-70 2 260 .. 64 349 .. 63 386 .. 0.91 2 ? 2.4 0.0 0.014 0.014 77 107 .. 598 629 .. 583 637 .. 0.82 Alignments for each domain: == domain 1 score: 223.9 bits; conditional E-value: 6.3e-70 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamD 53 r+v+++N+q P p ie+n+gd++e+++ N+l d++ ++H+HGl+qngtn+ D 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 64 RSVLAINDQIPGPLIEANEGDHLEITVINNL-DSALTIHWHGLYQNGTNSED 114 899****************************.9999**************** PP AA1_2.hmm 54 GasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrgpliied 104 G+++vtqCpipp g ++tY+f+++ q Gt+WyH+H+++ DGl gplii+ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 115 GVTGVTQCPIPPsGGRYTYKFQLTGQFGTFWYHAHHQNLLADGLYGPLIIHS 166 **********985789************************************ PP AA1_2.hmm 105 keepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsl 150 +++p ++d++++l+++dwYh++s+e++k++ls+ y t a p p+s+ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 167 PRDPIkrgiDFDQDVVLMIADWYHNTSSEILKNMLSEpgYFGTPAAPSPNSV 218 **9988889***************************98888999******** PP AA1_2.hmm 151 lv...................netenatlevepgktYllriinvgafasqyl 183 ++ + ++ ++v gk+ ++riin g a+ y+ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 219 IMngignwdcdrfatiherceKINSLPIFNVIGGKKIRFRIINSGSHAMIYF 270 *****************9986555666789********************** PP AA1_2.hmm 184 vledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalv 233 + ++h++++ e+D++ v ps+v+ +++ +QRysv++ ++++ +++ + 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 271 SGDEHSLNVTEADSTPVYgPSSVHRIKLHNGQRYSVIIDTQEKeVGSSFYVR 322 ***************9953899******************9984669***** PP AA1_2.hmm 234 akmdetmldvvpddlqlnvtstlvydk 260 ++d++ + v+ dlq ++ k 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 323 GTIDTDCFAWVAGDLQKTGLGIVRVVK 349 *************99988776665544 PP == domain 2 score: 2.4 bits; conditional E-value: 0.014 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.e 107 + G + +H+H + + G+ g++i+++++ + 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 598 DIPGVWIMHCHIGWHLAGGFAGVIIVQPNKiK 629 55788889*******************98844 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 216.9 0.0 7.5e-68 7.5e-68 2 251 .. 58 327 .. 57 361 .. 0.89 2 ? -3.4 0.0 0.92 0.92 85 113 .. 596 624 .. 585 628 .. 0.80 Alignments for each domain: == domain 1 score: 216.9 bits; conditional E-value: 7.5e-68 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 spDGf rs+ +n+++pgpli +++gd+++i+v+n+L+ + +ihwhg 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 58 SPDGFLRSVLAINDQIPGPLIEANEGDHLEITVINNLDS-----ALTIHWHG 104 7***********************************975.....569***** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqycd 104 l+q+gtn +dg++ vtqCPi p g ++y+f++++q GtfwYH+h+++ d 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 105 LYQNGTNSEDGVTGVTQCPIPPsGGRYTYKFQLTGQFGTFWYHAHHQNLLAD 156 ********************985789************************** PP AA1_1.hmm 105 glrGalvvydpedplkslydvddestvitladwyhtaakell.......... 146 gl G+l+++ p+dp k+ d+d++ v+++adwyh++++e+l 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 157 GLYGPLIIHSPRDPIKRGIDFDQD-VVLMIADWYHNTSSEILknmlsepgyf 207 *********************976.799***********9998999999999 PP AA1_1.hmm 147 ..klvavadstlinGlgryagg..........peaelavvnvekgkrYrfrl 186 +++ ++s ++nG+g + + + ++l + nv gk+ rfr+ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 208 gtPAAPSPNSVIMNGIGNWDCDrfatiherceKINSLPIFNVIGGKKIRFRI 259 8777799**********99866566666666455679999************ PP AA1_1.hmm 187 vsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvlean 237 ++ +++ fs d+h+l+v ead++ + p +v++i++ gqrysv+++++ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 260 INSGSHAMIYFSGDEHSLNVTEADSTPVyGPSSVHRIKLHNGQRYSVIIDTQ 311 *************************987369******************986 PP AA1_1.hmm 238 qe.vd.nYwiranpnl 251 ++ v+ +++r + ++ 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 312 EKeVGsSFYVRGTIDT 327 5414336888877665 PP == domain 2 score: -3.4 bits; conditional E-value: 0.92 AA1_1.hmm 85 vpdqaGtfwYHshlstqycdglrGalvvy 113 ++d G + H h+ g G ++v 943696|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 596 MADIPGVWIMHCHIGWHLAGGFAGVIIVQ 624 4677899999************9999996 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (658 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 114.93 // Query: 11089|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 [L=74] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- [No hits detected that satisfy reporting thresholds] Domain annotation for each model (and alignments): [No targets detected that satisfy reporting thresholds] Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (74 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 0 (0); expected 0.1 (0.02) Passed bias filter: 0 (0); expected 0.1 (0.02) Passed Vit filter: 0 (0); expected 0.0 (0.001) Passed Fwd filter: 0 (0); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 0 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 424.71 // Query: 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 [L=252] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.5e-35 110.7 0.0 5.4e-20 60.3 0.0 2.1 2 AA1.hmm 3e-35 109.9 0.0 1.1e-21 65.4 0.0 2.0 2 AA1_3.hmm 3.1e-25 76.9 0.0 1.2e-13 38.8 0.0 2.1 2 AA1_1.hmm 6.2e-22 66.1 0.0 1.3e-14 42.0 0.0 2.1 2 AA1_2.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 60.3 0.0 5.4e-20 5.4e-20 6 57 .. 73 128 .. 68 140 .. 0.88 2 ! 48.6 0.0 1.9e-16 1.9e-16 131 213 .. 144 235 .. 132 241 .. 0.77 Alignments for each domain: == domain 1 score: 60.3 bits; conditional E-value: 5.4e-20 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGl 51 + + r+v+++Ngq+PgP+ieanegD++++tV+N + ++++t+HwhGl 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 73 TaaldgFLRPVLAINGQIPGPLIEANEGDRLEITVKNLM-DTPLTMHWHGL 122 4555567899****************************9.78********* PP AA1.hmm 52 rqlgtn 57 q +n 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 123 YQASQN 128 **8877 PP == domain 2 score: 48.6 bits; conditional E-value: 1.9e-16 AA1.hmm 131 dwyhktaeellken.atgaepapdsllinGkgrlync.....s......sk 169 d +h+ +e t a+p ++s+linG g+ nc s s+ 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 144 DIVHELLSEAG--HiGTPAAPGANSALINGVGEW-NCslattSqqckqvSS 191 44444444333..2357778889*********97.5645544145545655 PP AA1.hmm 170 levlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyv 213 +++v++g++ r+rlin +++a++++s+d+H l++ eaD +++ 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 192 PPEFTVTAGQRIRFRLINSGVHAMFFYSVDEHMLNITEADSTPI 235 569*************************************9987 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 65.4 0.0 1.1e-21 1.1e-21 11 80 .. 60 128 .. 54 131 .. 0.92 2 ! 42.6 0.0 9.4e-15 9.4e-15 166 238 .. 158 236 .. 135 245 .. 0.81 Alignments for each domain: == domain 1 score: 65.4 bits; conditional E-value: 1.1e-21 AA1_3.hmm 11 gvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknn 61 +tr+++l+vt++t+a DG+ +++l++ngq+Pgp+iea+ GD+le+tvkn 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 60 PTTRTFNLTVTQTTAALDGFLRPVLAINGQIPGPLIEANEGDRLEITVKNL 110 579**********************************************98 PP AA1_3.hmm 62 lkknGtsiHwHGirqlntn 80 ++ ++HwHG+ q ++n 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 111 MD-TPLTMHWHGLYQASQN 128 76.6789*******98876 PP == domain 2 score: 42.6 bits; conditional E-value: 9.4e-15 AA1_3.hmm 166 sggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrli 210 + ++p a++ Ling +++++s + ++ ++ e+++++g++ r+rli 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 158 TPAAPGANSALINGVGEWNCSLAttsqqcKQVSSPPEFTVTAGQRIRFRLI 208 4667889*************988777666566666779************* PP AA1_3.hmm 211 ntsvdstfkfsidgHkltviaaDfvpie 238 n++v+++f +s+d+H l++ +aD pi 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 209 NSGVHAMFFYSVDEHMLNITEADSTPIY 236 **************************96 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 38.8 0.0 1.2e-13 1.2e-13 3 61 .. 76 129 .. 74 139 .. 0.90 2 ! 36.3 0.0 7.2e-13 7.2e-13 147 213 .. 159 234 .. 135 240 .. 0.75 Alignments for each domain: == domain 1 score: 38.8 bits; conditional E-value: 1.2e-13 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 DGf r + +ng++pgpli +++gd+++i+v+n + + ++hwhg 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 76 LDGFLRPVLAINGQIPGPLIEANEGDRLEITVKNLM-----DTPLTMHWHG 121 6*******************************9864.....556789**** PP AA1_1.hmm 54 lfqkgtnw 61 l+q+++n+ 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 122 LYQASQNI 129 ***99986 PP == domain 2 score: 36.3 bits; conditional E-value: 7.2e-13 AA1_1.hmm 147 klvavadstlinGlgrya...ggpeaelav......vnvekgkrYrfrlvs 188 +++ a+s+linG+g ++ ++++++ +v++g+r rfrl++ 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 159 PAAPGANSALINGVGEWNcslATTSQQCKQvssppeFTVTAGQRIRFRLIN 209 566899**********9944423333333311122268************* PP AA1_1.hmm 189 iscdpnftfsidghnltvieadgvn 213 ++ f +s+d+h l++ ead++ 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 210 SGVHAMFFYSVDEHMLNITEADSTP 234 **********************986 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.0 0.0 1.3e-14 1.3e-14 2 51 .. 81 129 .. 80 134 .. 0.95 2 ! 22.3 0.0 1.3e-08 1.3e-08 126 199 .. 141 234 .. 130 241 .. 0.82 Alignments for each domain: == domain 1 score: 42.0 bits; conditional E-value: 1.3e-14 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtna 51 r+v+++Ngq P p ie+n+gdr+e++++N + d++ ++H+HGl+q ++n 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 81 RPVLAINGQIPGPLIEANEGDRLEITVKNLM-DTPLTMHWHGLYQASQNI 129 899**************************99.99***********99986 PP == domain 2 score: 22.3 bits; conditional E-value: 1.3e-08 AA1_2.hmm 126 eskelvkeflskynptg..aepipdsllv..................nete 156 +s+++v+e+ls++ g a p +s+l+ + ++ 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 141 TSSDIVHELLSEAGHIGtpAAPGANSALIngvgewncslattsqqckQVSS 191 567777777777555441155666778888888888888888888777777 PP AA1_2.hmm 157 natlevepgktYllriinvgafasqylvledhemtivevDGvd 199 +++v++g++ ++r+in g+ a+++ ++++h ++i e+D++ 1119|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 192 PPEFTVTAGQRIRFRLINSGVHAMFFYSVDEHMLNITEADSTP 234 8899************************************975 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (252 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 35.91 // Query: WAQ88009.1|AA1 [L=137] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.1e-23 69.8 0.0 6.4e-23 69.4 0.0 1.1 1 AA1_3.hmm 2.7e-20 61.3 0.0 3.7e-20 60.8 0.0 1.1 1 AA1.hmm 8.8e-15 42.5 0.0 1.3e-14 42.0 0.0 1.2 1 AA1_2.hmm 1e-14 42.4 0.0 1.4e-14 41.9 0.0 1.2 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 69.4 0.0 6.4e-23 6.4e-23 11 79 .. 55 122 .. 47 125 .. 0.92 Alignments for each domain: == domain 1 score: 69.4 bits; conditional E-value: 6.4e-23 AA1_3.hmm 11 gvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqlnt 79 +tr+y+l+vte+t+a DG+ +++l++ngq+Pgp+iea+ GD+le+tv+n+++ ++HwHG+ q ++ WAQ88009.1|AA1 55 PTTRRYNLTVTETTAALDGFLRPVLAINGQIPGPLIEANEGDRLEITVNNQMN-ISLTMHWHGLYQASE 122 579***********************************************997.6789******99865 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 60.8 0.0 3.7e-20 3.7e-20 5 56 .. 67 122 .. 63 125 .. 0.87 Alignments for each domain: == domain 1 score: 60.8 bits; conditional E-value: 3.7e-20 AA1.hmm 5 ek.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgt 56 ++ + r+v+++Ngq+PgP+ieanegD++++tV+N++ + ++t+HwhGl q + WAQ88009.1|AA1 67 TTaaldgFLRPVLAINGQIPGPLIEANEGDRLEITVNNQM-NISLTMHWHGLYQASE 122 5555566789*****************************9.789*********9765 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.0 0.0 1.3e-14 1.3e-14 2 49 .. 76 122 .. 75 127 .. 0.94 Alignments for each domain: == domain 1 score: 42.0 bits; conditional E-value: 1.3e-14 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngt 49 r+v+++Ngq P p ie+n+gdr+e++++N++ + + ++H+HGl+q ++ WAQ88009.1|AA1 76 RPVLAINGQIPGPLIEANEGDRLEITVNNQM-NISLTMHWHGLYQASE 122 89*****************************.8999*********876 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.9 0.0 1.4e-14 1.4e-14 3 60 .. 71 123 .. 69 129 .. 0.91 Alignments for each domain: == domain 1 score: 41.9 bits; conditional E-value: 1.4e-14 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkgtn 60 DGf r + +ng++pgpli +++gd+++i+v+n+ m+ s ++hwhgl+q++++ WAQ88009.1|AA1 71 LDGFLRPVLAINGQIPGPLIEANEGDRLEITVNNQ-----MNISLTMHWHGLYQASET 123 6*******************************886.....67899*********8765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (137 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 135.90 // Query: 1118|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 [L=367] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.3e-18 53.5 0.0 6.8e-18 53.4 0.0 1.1 1 AA1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 53.4 0.0 1.7e-18 6.8e-18 271 357 .. 191 328 .. 84 329 .. 0.69 Alignments for each domain: == domain 1 score: 53.4 bits; conditional E-value: 1.7e-18 AA1.hmm 271 s..........nvsf.vepstslleay..sgv......detka......kl 296 + n+s+ + p +++l+++ gv + 1118|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 191 PagtigkyfmnNISWaTYPYQPVLHDLtpGGVgainssR---VanvifpT- 237 155555555556666445666666663232224442220...13333330. PP AA1.hmm 297 kln...............hp..lhghdfvvv...............nfdae 315 + hp lh +d+++v ++++e 1118|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 238 --AewydlylinvdatgsHPyhLHAMDMHIVafgrgfpsperlsqiQYNTE 286 ..0333444444555577*************88887777776666556699 PP AA1.hmm 316 deakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 ++ +rdtv+vp+ + vvir++ad pg w++hchi +H++ G 1118|Pgt_201_A1_GeneCatalog_proteins_20191017.aa.fasta|AA1 287 NPLRRDTVVVPPASFVVIRLHADIPGAWIMHCHIGWHIAGGF 328 9999***********************************997 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (367 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 3 (0.75); expected 0.1 (0.02) Passed bias filter: 3 (0.75); expected 0.1 (0.02) Passed Vit filter: 3 (0.75); expected 0.0 (0.001) Passed Fwd filter: 1 (0.25); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 258.62 // Query: 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 [L=707] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.3e-103 333.6 0.3 5.5e-103 333.3 0.3 1.1 1 AA1.hmm 1.5e-80 258.8 0.0 1.4e-79 255.5 0.1 2.1 2 AA1_3.hmm 1e-74 239.6 0.0 1.5e-72 232.5 0.0 2.9 3 AA1_2.hmm 7.6e-70 223.4 0.1 1.8e-69 222.2 0.0 1.6 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 333.3 0.3 5.5e-103 5.5e-103 6 357 .. 73 668 .. 68 669 .. 0.86 Alignments for each domain: == domain 1 score: 333.3 bits; conditional E-value: 5.5e-103 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGl 51 + + r+v+++Ngq+PgP+ieanegD++++tV+N + ++++t+HwhGl 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 73 TaaldgFLRPVLAINGQIPGPLIEANEGDRLEITVKNLM-DTPLTMHWHGL 122 4555567899****************************9.78********* PP AA1.hmm 52 rqlgtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyad 101 q+gtnw+DGv gvtqcpi++ g +tY+f++++q Gt+wyHsH++ ad 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 123 YQNGTNWEDGVTGVTQCPIPSnGGVYTYKFKLDGQFGTFWYHSHHQNLMAD 173 *******************9889**************************** PP AA1.hmm 102 GlrGaliirdpks..kekydvddeelvillsdwyhktaeell......ken 144 G+ G++ii++p++ k+++d+d +++v++l+dwyh+t+++++ ++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 174 GINGPMIIHSPRDplKRSVDFD-HDVVLMLTDWYHNTSSDIVhellseAGH 223 *********9966444499998.788****************999854222 PP AA1.hmm 145 .atgaepapdsllinGkgrlync.....s......sklevlkvepgktyrl 183 t a+p ++s+linG g+ nc s s+ +++v++g++ r+ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 224 iGTPAAPGANSALINGVGEW-NCslattSqqckqvSSPPEFTVTAGQRIRF 273 566677779*********97.5645544145545655569*********** PP AA1.hmm 184 rlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvll 233 rlin +++a++++s+d+H l++ eaD +++ p + ++ ++ Gqry+v++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 274 RLINSGVHAMFFYSVDEHMLNITEADSTPIYgPSDFRHIWLHNGQRYSVIV 324 *****************************9659****************** PP AA1.hmm 234 kanqsa..gnywiraslds...a....afdnttalailrYkgassas.... 271 ++++++ +++ +ra++ds a + + ta +ilr ++++++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 325 QTKKEDagRSFHMRATMDSdcwAwipnD-IQDTAFGILRVVNEDTKPekis 374 *88888767******9999766255534.58899******88766667889 PP AA1.hmm 272 ................................................... 271 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 375 karpktrgwpqefpeecldidprmmvpivkrsvptsvvgsgrfeagfgfqf 425 999999********************************************* PP AA1.hmm 272 ................................................... 271 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 426 innpqehltrndavkiakalnldwtrdrnlrekkkflseshrtssrwggnd 476 ********************************9999999999999999999 PP AA1.hmm 272 ................................................... 271 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 477 ldstedthdsqqeshslnadsrkrqlnirrqspppfggrknstgvtrlagp 527 999999999999999999999999999999999999999999999999999 PP AA1.hmm 272 ..............nvsf.vepstslleay..sgv......detka..... 294 n+s+ + p +++l+++ gv 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 528 pptpagtigkyfmnNISWaTYPYQPVLHDLtpGGVgainssR---Vanvif 575 999999999999988888666778888874343335543320...133333 PP AA1.hmm 295 .klkln...............hp..lhghdfvvv...............nf 312 + + hp lh +d+++v ++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 576 pT---AewydlylinvdatgsHPyhLHAMDMHIVafgrgfpsperlsqiQY 623 40...1444445555556677*************88887777776666556 PP AA1.hmm 313 daedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 ++e++ +rdtv+vp+ + vvir++ad pg w++hchi +H++ G 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 624 NTENPLRRDTVVVPPASFVVIRLHADIPGAWIMHCHIGWHIAGGF 668 6999999**********************************9997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 255.5 0.1 1.4e-79 1.4e-79 12 300 .. 61 370 .. 54 382 .. 0.88 2 ? 0.4 0.0 0.067 0.067 94 154 .. 637 697 .. 633 703 .. 0.78 Alignments for each domain: == domain 1 score: 255.5 bits; conditional E-value: 1.4e-79 AA1_3.hmm 12 vtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnl 62 +tr+++l+vt++t+a DG+ +++l++ngq+Pgp+iea+ GD+le+tvkn + 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 61 TTRRFNLTVTQTTAALDGFLRPVLAINGQIPGPLIEANEGDRLEITVKNLM 111 79**********************************************987 PP AA1_3.hmm 63 kknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefrat.qyGts 111 + ++HwHG+ q+ tn++DGv+gvtqCpi+ g +tY+f+ + q+Gt 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 112 D-TPLTMHWHGLYQNGTNWEDGVTGVTQCPIPSnGGVYTYKFKLDgQFGTF 161 6.6789*************************864789******9769**** PP AA1_3.hmm 112 wYHsHyslQyadGvlGplvinGP.....asanydvdlgpllltdwshesaf 157 wYHsH++ +adG+ Gp++i+ P s ++d+d+ +l+ltdw+h++ + 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 162 WYHSHHQNLMADGINGPMIIHSPrdplkRSVDFDHDV-VLMLTDWYHNTSS 211 **********************955554467888885.7899********* PP AA1_3.hmm 158 elveeae......asggppvadniLingknkvkkskk......eeegeyse 196 ++v+e + ++p a++ Ling +++++s + ++ ++ e 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 212 DIVHELLseaghiGTPAAPGANSALINGVGEWNCSLAttsqqcKQVSSPPE 262 *99998866665445556899*************98877766656666677 PP AA1_3.hmm 197 vklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdsll 246 +++++g++ r+rlin++v+++f +s+d+H l++ +aD pi p + +++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 263 FTVTAGQRIRFRLINSGVHAMFFYSVDEHMLNITEADSTPIYgPSDFRHIW 313 9****************************************759999**** PP AA1_3.hmm 247 igigqRydviveanqe..eenywlraelaeaCskl..naeekeikailrYe 293 ++ gqRy viv++++e +++ +ra+++++C ++ n+ ++++ +ilr 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 314 LHNGQRYSVIVQTKKEdaGRSFHMRATMDSDCWAWipNDIQDTAFGILRVV 364 **************998899************9985567788889999988 PP AA1_3.hmm 294 eassaep 300 ++++ +p 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 365 NEDT-KP 370 7776.34 PP == domain 2 score: 0.4 bits; conditional E-value: 0.067 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydvdlg 144 +p + ++ + +a+ G H H+ a G +G +v++ a + + + + 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 637 PPASFVVIRLHADIPGAWIMHCHIGWHIAGGFAGVVVVQPEAISRFVIPDE 687 5666677778888889999******************99888887777666 PP AA1_3.hmm 145 pllltdwshe 154 +l l d +e 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 688 NLALCDARTE 697 6666666555 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 232.5 0.0 1.5e-72 1.5e-72 2 267 .. 81 372 .. 80 411 .. 0.91 2 ? 2.2 0.0 0.016 0.016 151 194 .. 564 607 .. 534 622 .. 0.84 3 ? 0.8 0.0 0.043 0.043 77 106 .. 649 678 .. 635 696 .. 0.81 Alignments for each domain: == domain 1 score: 232.5 bits; conditional E-value: 1.5e-72 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnam 52 r+v+++Ngq P p ie+n+gdr+e++++N + d++ ++H+HGl+qngtn+ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 81 RPVLAINGQIPGPLIEANEGDRLEITVKNLM-DTPLTMHWHGLYQNGTNWE 130 899**************************99.99***************** PP AA1_2.hmm 53 DGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrgplii 102 DG+++vtqCpip g +tY+f+++ q Gt+WyHsH+++ DG+ gp+ii 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 131 DGVTGVTQCPIPSnGGVYTYKFKLDGQFGTFWYHSHHQNLMADGINGPMII 181 ***********9626789********************************* PP AA1_2.hmm 103 edkeepy....eydeeltltlsdwYheeskelvkeflskynptg..aepip 147 + +++p ++d++++l+l+dwYh++s+++v+e+ls++ g a p 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 182 HSPRDPLkrsvDFDHDVVLMLTDWYHNTSSDIVHELLSEAGHIGtpAAPGA 232 **998877778****************************776551166777 PP AA1_2.hmm 148 dsllv..................netenatlevepgktYllriinvgafas 180 +s+l+ + ++ +++v++g++ ++r+in g+ a+ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 233 NSALIngvgewncslattsqqckQVSSPPEFTVTAGQRIRFRLINSGVHAM 283 89999**************99988888999********************* PP AA1_2.hmm 181 qylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tskn 229 ++ ++++h ++i e+D++ + ps ++ + +QRysv+v++k++ + ++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 284 FFYSVDEHMLNITEADSTPIYgPSDFRHIWLHNGQRYSVIVQTKKEdAGRS 334 ******************9853889******************997366** PP AA1_2.hmm 230 yalvakmdetmldvvpddlqlnvtstlvydksaalaea 267 +++ a+md++ + +p+d+q + l+ ++ +++e+ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 335 FHMRATMDSDCWAWIPNDIQDTAFGILRVVNEDTKPEK 372 ********************999888877666665554 PP == domain 2 score: 2.2 bits; conditional E-value: 0.016 AA1_2.hmm 151 lvnetenatlevepgktYllriinvgafasqylvledhemtive 194 +n+++ a++ + + + Y l +inv a s+ +l +m+iv 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 564 AINSSRVANVIFPTAEWYDLYLINVDATGSHPYHLHAMDMHIVA 607 5688888999999999*************************996 PP == domain 3 score: 0.8 bits; conditional E-value: 0.043 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke 106 + G++ +H+H + + G+ g+++++++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 649 DIPGAWIMHCHIGWHIAGGFAGVVVVQPEA 678 5579999*******************9976 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 222.2 0.0 1.8e-69 1.8e-69 3 253 .. 76 345 .. 74 380 .. 0.85 2 ? -3.7 0.0 1.1 1.1 86 113 .. 648 675 .. 636 677 .. 0.81 Alignments for each domain: == domain 1 score: 222.2 bits; conditional E-value: 1.8e-69 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 DGf r + +ng++pgpli +++gd+++i+v+n + + ++hwhg 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 76 LDGFLRPVLAINGQIPGPLIEANEGDRLEITVKNLM-----DTPLTMHWHG 121 6*******************************9864.....556789**** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqyc 103 l+q+gtnw+dg++ vtqCPi + g ++y+fk+++q GtfwYHsh+++ + 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 122 LYQNGTNWEDGVTGVTQCPIPSnGGVYTYKFKLDGQFGTFWYHSHHQNLMA 172 ********************873678************************* PP AA1_1.hmm 104 dglrGalvvydpedplkslydvddestvitladwyhtaakell........ 146 dg+ G+++++ p+dplk+ d+d++ v++l+dwyh++++++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 173 DGINGPMIIHSPRDPLKRSVDFDHD-VVLMLTDWYHNTSSDIVhellseag 222 **********************986.799***********99999999999 PP AA1_1.hmm 147 ....klvavadstlinGlgrya...ggpeaelav......vnvekgkrYrf 184 +++ a+s+linG+g ++ ++++++ +v++g+r rf 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 223 higtPAAPGANSALINGVGEWNcslATTSQQCKQvssppeFTVTAGQRIRF 273 987777799***********9944423333333311122268********* PP AA1_1.hmm 185 rlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvl 234 rl++ ++ f +s+d+h l++ ead++ + p + +i + gqrysv++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 274 RLINSGVHAMFFYSVDEHMLNITEADSTPIyGPSDFRHIWLHNGQRYSVIV 324 ****************************86369****************** PP AA1_1.hmm 235 eanqevd..nYwiranpnlgk 253 ++++e + + +ra++++ 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 325 QTKKEDAgrSFHMRATMDSDC 345 *98865323899999998766 PP == domain 2 score: -3.7 bits; conditional E-value: 1.1 AA1_1.hmm 86 pdqaGtfwYHshlstqycdglrGalvvy 113 +d G++ H h+ g G +vv 1117|Pgt_201_B1_GeneCatalog_proteins_20191015.aa.fasta|AA1 648 ADIPGAWIMHCHIGWHIAGGFAGVVVVQ 675 567799999************9999985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (707 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 119.15 // Query: 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 [L=749] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.9e-87 281.1 2.0 4.1e-57 182.4 0.0 2.3 2 AA1.hmm 8.2e-68 216.9 0.1 4.1e-34 106.2 0.0 3.0 3 AA1_3.hmm 6.8e-61 194.2 0.0 7.3e-38 118.4 0.0 3.2 3 AA1_2.hmm 2.1e-55 176.0 0.1 1.1e-33 104.7 0.0 2.5 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 97.9 0.5 1.9e-31 1.9e-31 4 74 .. 66 140 .. 63 153 .. 0.86 2 ! 182.4 0.0 4.1e-57 4.1e-57 91 357 .. 199 710 .. 170 711 .. 0.82 Alignments for each domain: == domain 1 score: 97.9 bits; conditional E-value: 1.9e-31 AA1.hmm 4 eek.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlr 52 e++ + r+v+++Ngq+PgP+ieanegD++++tV N++ + g+t+HwhGl 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 66 ETTaaldgFLRPVLAINGQVPGPLIEANEGDQLEITVINHM-KVGLTLHWHGLY 118 555555667899****************************9.68********** PP AA1.hmm 53 qlgtnwaDGvagvtqcpiapgk 74 q+gtnw+DGv gvtqcpi+p 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 119 QNGTNWEDGVTGVTQCPIPPMV 140 ******************9854 PP == domain 2 score: 182.4 bits; conditional E-value: 4.1e-57 AA1.hmm 91 yHsHvslqyadGlrGaliirdpks..kekydvddeelvillsdwyhktaeell. 141 yHsH++ adG+ G+lii++p++ k++ d+d +e+v++l+dwyh+t+++++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 199 YHSHHQNLMADGINGPLIIHSPRDplKRHTDFD-QEVVLVLADWYHNTSTDIVe 251 ********************9966544489998.899****************8 PP AA1.hmm 142 .....ken.atgaepapdsllinGkgrlync....s.......sklevlkvepg 178 ++ t a+p p+s+linG g+ + c + ++ ++++e+g 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 252 hmlsePGYfGTPAAPGPNSALINGIGEWN-CsqatKseqckqiNSPPEFTFEAG 304 8875422246666777**********975.634440455556644569****** PP AA1.hmm 179 ktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydv 231 + r+rlina+++a++++s+d+H+l+v eaDg+ + p ++ + ++ Gqry+v 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 305 GKIRFRLINAGVHAMFFYSVDEHTLNVTEADGTGIYgPPALHRVWLHNGQRYSV 358 ********************************99854899************** PP AA1.hmm 232 llkanqsa..gnywiraslds...a....afdnttalailrYkg....assas. 271 ++++ +++ +++++ra++ds a + + ta +ilr + a + 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 359 VINTREEDagRSFYLRATMDSdcwAwvpnD-IQLTAFGILRLVDggynA---Kk 408 ***88888767******9999766255534.578999****85545541...23 PP AA1.hmm 272 ...................................................... 271 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 409 vshsrpvtqdwsdeilgdcvdlptssmvpilkqsvptsvvgsgsfkagfgfqfi 462 446778889999999999999999999*************************** PP AA1.hmm 272 ...................................................... 271 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 463 ndtsehvsraeavqlaqqvnstslllttnprtedlnetsdtsnylrndtgrtll 516 ********************9999999999999999999999999999999999 PP AA1.hmm 272 ...................................................... 271 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 517 aerihparglskaqsqpeypqtaynkrqvkvgqhnlpsgnrtnqlgitrtggpp 570 999999999999999999999999999888888888888888888888888888 PP AA1.hmm 272 .............nvsf.vepstslleay..sgv...detkaklkln....... 299 n+s+ + p +++l+++ gv ++++ + 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 571 ptpagtigkfflnNISWtTYPYQPILHDLtpGGVgavNDSNV----Anviypta 620 888888888888888885567788888743422354422222....02233445 PP AA1.hmm 300 ...............hp..lhghdfvvv...............nfdaedeakrd 321 hp lh d+++v +++++++ +rd 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 621 ewydlylanvdpagsHPyhLHALDMHIVaegkglptpqnlanaTYNTDNPLRRD 674 555666667778899*************988888777666544444888888** PP AA1.hmm 322 tvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 t++vp+ + +v+r++ad pg w++hchi +H++ G 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 675 TIVVPPASFIVVRLQADVPGAWIVHCHIGWHIAAGF 710 *********************************997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 105.4 0.2 7.1e-34 7.1e-34 9 100 .. 53 143 .. 48 161 .. 0.90 2 ! 106.2 0.0 4.1e-34 4.1e-34 113 280 .. 199 385 .. 196 420 .. 0.83 3 ? 0.7 0.0 0.055 0.055 94 141 .. 679 726 .. 676 734 .. 0.83 Alignments for each domain: == domain 1 score: 105.4 bits; conditional E-value: 7.1e-34 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnl 62 ++ +tr+yt++vte+t+a DG+ +++l++ngq+Pgp+iea+ GD+le+tv n++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 53 EERITRTYTFNVTETTAALDGFLRPVLAINGQVPGPLIEANEGDQLEITVINHM 106 56789************************************************9 PP AA1_3.hmm 63 kknGtsiHwHGirqlntneqDGvpgvtqCpiapgesft 100 k G ++HwHG+ q+ tn++DGv+gvtqCpi+p +t 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 107 K-VGLTLHWHGLYQNGTNWEDGVTGVTQCPIPPMVVVT 143 8.8*****************************987666 PP == domain 2 score: 106.2 bits; conditional E-value: 4.1e-34 AA1_3.hmm 113 YHsHyslQyadGvlGplvinGP...asanydvdl.gpllltdwshesafelvee 162 YHsH++ +adG+ Gpl+i+ P + + d d +l+l+dw+h++ +++ve+ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 199 YHSHHQNLMADGINGPLIIHSPrdpLKRHTDFDQeVVLVLADWYHNTSTDIVEH 252 ********************99444234445555135789*************9 PP AA1_3.hmm 163 ae......asggppvadniLingknkvkkskk......eeegeysevklekgkk 204 + + ++p ++ Ling +++++s++ ++ ++ e+++e+g k 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 253 MLsepgyfGTPAAPGPNSALINGIGEWNCSQAtkseqcKQINSPPEFTFEAGGK 306 9977776556667999*************998776655555566679******* PP AA1_3.hmm 205 yrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviv 257 r+rlin++v+++f +s+d+H+l+v +aD i p + ++++ gqRy v++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 307 IRFRLINAGVHAMFFYSVDEHTLNVTEADGTGIYgPPALHRVWLHNGQRYSVVI 360 *********************************758899*************** PP AA1_3.hmm 258 eanqe..eenywlraelaeaCskln 280 ++++e ++++lra+++++C ++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 361 NTREEdaGRSFYLRATMDSDCWAWV 385 **9998899************9863 PP == domain 3 score: 0.7 bits; conditional E-value: 0.055 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydv 141 +p + ++ + +a+ G H H+ a+G +G ++++ +n+++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 679 PPASFIVVRLQADVPGAWIVHCHIGWHIAAGFAGVVIVQPDVIKNFEI 726 5666677788889999999******************99888888876 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 69.9 0.2 4.2e-23 4.2e-23 2 67 .. 76 140 .. 75 152 .. 0.93 2 ! 118.4 0.0 7.3e-38 7.3e-38 84 257 .. 199 398 .. 186 466 .. 0.88 3 ? 1.7 0.0 0.024 0.024 74 106 .. 689 720 .. 662 730 .. 0.82 Alignments for each domain: == domain 1 score: 69.9 bits; conditional E-value: 4.2e-23 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGa 55 r+v+++Ngq P p ie+n+gd++e+++ N++ + +lH+HGl+qngtn+ DG+ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 76 RPVLAINGQVPGPLIEANEGDQLEITVINHM-KVGLTLHWHGLYQNGTNWEDGV 128 899****************************.8899****************** PP AA1_2.hmm 56 smvtqCpippge 67 ++vtqCpipp 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 129 TGVTQCPIPPMV 140 *********965 PP == domain 2 score: 118.4 bits; conditional E-value: 7.3e-38 AA1_2.hmm 84 yHsHskgqYeDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvke 133 yHsH+++ DG+ gplii+ +++p ++d+e++l+l+dwYh++s+++v++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 199 YHSHHQNLMADGINGPLIIHSPRDPLkrhtDFDQEVVLVLADWYHNTSTDIVEH 252 9********************9977766779*********************** PP AA1_2.hmm 134 flsk..ynptgaepipdsllv..................netenatlevepgkt 167 +ls+ y t a p p+s+l+ + ++ ++++e+g + 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 253 MLSEpgYFGTPAAPGPNSALIngigewncsqatkseqckQINSPPEFTFEAGGK 306 ***98888999************************998877788899******* PP AA1_2.hmm 168 YllriinvgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLv 220 ++r+in g+ a+++ ++++h++++ e+DG+ + p + + + +QRysv++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 307 IRFRLINAGVHAMFFYSVDEHTLNVTEADGTGIYgPPALHRVWLHNGQRYSVVI 360 *******************************9972566899************* PP AA1_2.hmm 221 kaknd.tsknyalvakmdetmldvvpddlqlnvtstlv 257 +++++ + +++ l a+md++ + vp+d+ql + l+ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 361 NTREEdAGRSFYLRATMDSDCWAWVPNDIQLTAFGILR 398 ***97366**********************99887775 PP == domain 3 score: 1.7 bits; conditional E-value: 0.024 AA1_2.hmm 74 tveeqvGtYWyHsHskgqYeDGlrgpliiedke 106 ++ + G++ +H+H + + G+ g++i++++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 689 QA-DVPGAWIVHCHIGWHIAAGFAGVVIVQPDV 720 44.6689999*******************9875 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 68.7 0.0 1e-22 1e-22 3 75 .. 71 138 .. 69 146 .. 0.94 2 ! 104.7 0.0 1.1e-33 1.1e-33 94 252 .. 199 380 .. 167 418 .. 0.84 Alignments for each domain: == domain 1 score: 68.7 bits; conditional E-value: 1e-22 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfq 56 DGf r + +ng++pgpli +++gd+++i+v+n+ m+ ++hwhgl+q 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 71 LDGFLRPVLAINGQVPGPLIEANEGDQLEITVINH-----MKVGLTLHWHGLYQ 119 6********************************96.....678899******** PP AA1_1.hmm 57 kgtnwadgpafvtqCPiap 75 +gtnw+dg++ vtqCPi p 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 120 NGTNWEDGVTGVTQCPIPP 138 *****************87 PP == domain 2 score: 104.7 bits; conditional E-value: 1.1e-33 AA1_1.hmm 94 YHshlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell. 146 YHsh+++ + dg+ G+l+++ p+dplk+ d+d+e v+ ladwyh++++++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 199 YHSHHQNLMADGINGPLIIHSPRDPLKRHTDFDQE-VVLVLADWYHNTSTDIVe 251 ********************************987.6999**********9998 PP AA1_1.hmm 147 ...........klvavadstlinGlgrya...ggpeaelavvn......vekgk 180 +++ ++s+linG+g ++ ++++ + +n e+g 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 252 hmlsepgyfgtPAAPGPNSALINGIGEWNcsqATKSEQCKQINsppeftFEAGG 305 9999999998777799***********984323334445555422222278999 PP AA1_1.hmm 181 rYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvv 233 + rfrl++ ++ f +s+d+h+l+v eadg+ + p +++ + gqrysvv 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 306 KIRFRLINAGVHAMFFYSVDEHTLNVTEADGTGIyGPPALHRVWLHNGQRYSVV 359 *******************************98636999*************** PP AA1_1.hmm 234 leanqe..vdnYwiranpnlg 252 +++ +e + +++ra++++ 2248|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 360 INTREEdaGRSFYLRATMDSD 380 **9765115689999998875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (749 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.01s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 85.99 // Query: WAR60203.1|AA1 [L=610] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.8e-57 183.6 0.0 2.5e-57 183.1 0.0 1.1 1 AA1.hmm 1.3e-39 124.2 0.0 2.7e-37 116.6 0.0 3.0 3 AA1_2.hmm 9.8e-37 114.8 0.0 1.9e-35 110.6 0.0 2.1 2 AA1_3.hmm 2e-33 103.8 0.1 4.7e-33 102.6 0.0 1.6 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.1 0.0 2.5e-57 2.5e-57 93 357 .. 56 572 .. 52 573 .. 0.81 Alignments for each domain: == domain 1 score: 183.1 bits; conditional E-value: 2.5e-57 AA1.hmm 93 sHvslqyadGlrGaliirdpks..kekydvddeelvillsdwyhktaeell......ken.atgaepapdsllinGkgrlync....s....... 167 sH++ adG+ G++ii++pk+ k+++d+d e++v++lsdwyh+t+++++ ++ t a+p ++s+linG g+ nc + WAR60203.1|AA1 56 SHHQNLMADGINGPMIIHSPKDplKRSVDFD-EDVVLMLSDWYHNTSSDIVremlseAGHiGTAAAPGANSALINGVGEW-NCslatTtqqckqv 148 9*****************9955444499998.899****************88886522367788888**********97.56354404455456 PP AA1.hmm 168 sklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywiraslds...a....a 252 ++ ++++++g++ r+rlina+++a++++s+d+H l++ eaD ++v p + ++ ++ Gqry+v++++++++ +n+ +ra++ds + + WAR60203.1|AA1 149 TSPPEFTITAGQRIRFRLINAGVHAMFFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKDagRNFHMRATMDSdcwSwvpnD 243 55569****************************************9659*******************88888767******9999766255534 PP AA1.hmm 253 fdnttalailrYkgassas............................................................................ 271 + ta ++lr +++ ++ WAR60203.1|AA1 244 -IQDTAFGVLRVVNDNAKPvkiskalpntrgwpqdfpqecldidpkimvpivkrsvpasvvgsgrfeagfgfqfinntqehlsrsdavkiaeeln 337 .578999*****887666689999999******************************************************************** PP AA1.hmm 272 ............................................................................................... 271 WAR60203.1|AA1 338 ldwtrdqnlrekkkfvtpsqpvarsadsksaaedrngshviprrsgsgrgethqekssplralsnkrqveitheipppfgyrpsllgvtrlagpp 432 ***********887777777777777777777777777777777777777777777777777777777777777777777777777777777777 PP AA1.hmm 272 .............nvsf.vepstslleay..sgv...detkaklkln..........................hp..lhghdfvvv......... 310 n+s+ + p +++l+++ gv + hp lh +d+++v WAR60203.1|AA1 433 ptpvgtigkyfmnNISWaTYPYQPVLHDLtpGGVgtiN--------SsrvanvifptpewydlylvnvdatgsHPyhLHAMDMHIVafgrgfpta 519 77777777777777777455666666663232224331........033333344455555555556667788*************888777766 PP AA1.hmm 311 ......nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 +++++++ +rdtv+vp+ + vvir+ ad pg w++hchi +H++ G WAR60203.1|AA1 520 erlsqlEYNTDNPLRRDTVVVPPASFVVIRILADIPGAWIMHCHIGWHIAGGF 572 666555555888888**********************************9997 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 116.6 0.0 2.7e-37 2.7e-37 86 265 .. 56 261 .. 53 302 .. 0.90 2 ? 1.6 0.0 0.024 0.024 151 194 .. 468 511 .. 440 520 .. 0.83 3 ? 1.8 0.0 0.022 0.022 77 114 .. 553 591 .. 538 606 .. 0.79 Alignments for each domain: == domain 1 score: 116.6 bits; conditional E-value: 2.7e-37 AA1_2.hmm 86 sHskgqYeDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflskynp..tgaepipdsllv..................nete 156 sH+++ DG+ gp+ii+ +++p ++de+++l+lsdwYh++s+++v+e+ls++ t+a p +s+l+ + t+ WAR60203.1|AA1 56 SHHQNLMADGINGPMIIHSPKDPLkrsvDFDEDVVLMLSDWYHNTSSDIVREMLSEAGHigTAAAPGANSALIngvgewncslatttqqckQVTS 150 8********************8887888***************************976511667788899999**************99988889 PP AA1_2.hmm 157 natlevepgktYllriinvgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetmldvvpddlq 249 ++++++g++ ++r+in g+ a+++ ++++h ++i e+D++ v ps ++ + +QRysv++++k++ + +n+++ a+md++ + vp+d+q WAR60203.1|AA1 151 PPEFTITAGQRIRFRLINAGVHAMFFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKdAGRNFHMRATMDSDCWSWVPNDIQ 245 999***************************************9953889*******************98466********************** PP AA1_2.hmm 250 lnvtstlvydksaala 265 + +l+ +++a++ WAR60203.1|AA1 246 DTAFGVLRVVNDNAKP 261 9999988776666655 PP == domain 2 score: 1.6 bits; conditional E-value: 0.024 AA1_2.hmm 151 lvnetenatlevepgktYllriinvgafasqylvledhemtive 194 +n+++ a++ + + + Y l ++nv a s+ +l +m+iv WAR60203.1|AA1 468 TINSSRVANVIFPTPEWYDLYLVNVDATGSHPYHLHAMDMHIVA 511 57888889999999999***********************9996 PP == domain 3 score: 1.8 bits; conditional E-value: 0.022 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.epyeydee 114 + G++ +H+H + + G+ g ++++++ +e ee WAR60203.1|AA1 553 DIPGAWIMHCHIGWHIAGGFAGIVVVQPDAvRRFEIPEE 591 5579999********************987556666555 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 110.6 0.0 1.9e-35 1.9e-35 115 292 .. 56 254 .. 54 272 .. 0.84 2 ? 1.6 0.0 0.027 0.027 103 156 .. 550 603 .. 538 608 .. 0.82 Alignments for each domain: == domain 1 score: 110.6 bits; conditional E-value: 1.9e-35 AA1_3.hmm 115 sHyslQyadGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae......asggppvadniLingknkvkkskk......eeeg 192 sH++ +adG+ Gp++i+ P s ++d+d+ +l+l+dw+h++ +++v+e+ ++++p a++ Ling +++++s + ++ + WAR60203.1|AA1 56 SHHQNLMADGINGPMIIHSPkdplkRSVDFDEDV-VLMLSDWYHNTSSDIVREMLseaghiGTAAAPGANSALINGVGEWNCSLAtttqqcKQVT 149 899999*************955444478899986.789***********99999877776556677999*************9886666555555 PP AA1_3.hmm 193 eysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe..eenywlraelaeaCskl..nae 282 + e+++++g++ r+rlin++v+++f +s+d+H l++ +aD p+ p + +++++ gqRy vi++++++ +n+ +ra+++++C ++ n+ WAR60203.1|AA1 150 SPPEFTITAGQRIRFRLINAGVHAMFFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKdaGRNFHMRATMDSDCWSWvpNDI 244 666799***************************************759999******************998899************99744455 PP AA1_3.hmm 283 ekeikailrY 292 ++++ ++lr WAR60203.1|AA1 245 QDTAFGVLRV 254 6666666665 PP == domain 2 score: 1.6 bits; conditional E-value: 0.027 AA1_3.hmm 103 fratqyGtswYHsHyslQyadGvlGplvinGPasanydvdlgpllltdwshesa 156 a+ G H H+ a G +G +v++ a +++ + + l d +e + WAR60203.1|AA1 550 ILADIPGAWIMHCHIGWHIAGGFAGIVVVQPDAVRRFEIPEESIALCDSRTEPM 603 55666688899*******************99*****99999999998877765 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 102.6 0.0 4.7e-33 4.7e-33 96 253 .. 56 236 .. 50 269 .. 0.84 2 ? -3.4 0.0 0.91 0.91 84 113 .. 550 579 .. 539 582 .. 0.78 Alignments for each domain: == domain 1 score: 102.6 bits; conditional E-value: 4.7e-33 AA1_1.hmm 96 shlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgrya...ggpeaelavv. 174 sh+++ + dg+ G+++++ p+dplk+ d+d+ + v++l+dwyh++++++ ++++ a+s+linG+g ++ ++++++ v WAR60203.1|AA1 56 SHHQNLMADGINGPMIIHSPKDPLKRSVDFDE-DVVLMLSDWYHNTSSDIVremlseaghigtAAAPGANSALINGVGEWNcslATTTQQCKQVt 149 899999************************85.689************99999999999998878899***********9954434444444432 PP AA1_1.hmm 175 .....nvekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqe..vdnYwiranpnlgk 253 ++++g+r rfrl++ ++ f +s+d+h l++ ead++ + p + ++ + gqrysv+++++++ +n+ +ra++++ WAR60203.1|AA1 150 sppefTITAGQRIRFRLINAGVHAMFFYSVDEHMLNITEADSTPVyGPSDFRHVWLHNGQRYSVIIQTKEKdaGRNFHMRATMDSDC 236 22222799**********************************987369******************998751156******998765 PP == domain 2 score: -3.4 bits; conditional E-value: 0.91 AA1_1.hmm 84 kvpdqaGtfwYHshlstqycdglrGalvvy 113 ++d G++ H h+ g G +vv WAR60203.1|AA1 550 ILADIPGAWIMHCHIGWHIAGGFAGIVVVQ 579 55778899999******9999999999885 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (610 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 116.49 // Query: 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 [L=636] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.7e-94 304.7 0.3 3.7e-94 304.3 0.3 1.1 1 AA1.hmm 3.3e-70 224.8 0.1 4.3e-68 217.8 0.1 2.9 3 AA1_3.hmm 2.8e-65 208.6 0.0 9.7e-61 193.6 0.0 3.1 3 AA1_2.hmm 1e-64 206.6 0.0 3.5e-63 201.5 0.0 2.7 3 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 304.3 0.3 3.7e-94 3.7e-94 7 358 .] 68 607 .. 57 607 .. 0.83 Alignments for each domain: == domain 1 score: 304.3 bits; conditional E-value: 3.7e-94 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaD 60 + r+v+++N+q+PgP+ieanegD++++tV N+l + ++t+HwhG+ q+gtnw+D 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 68 FWREVLAINNQMPGPLIEANEGDRLEITVINRL-DSPLTMHWHGIYQNGTNWED 120 789*****************************9.68****************** PP AA1.hmm 61 GvagvtqcpiapgksftYeftvteqaGtywy.HsHvslqyadGlrGaliirdpk 113 G+ag+tqcpi+ g ++tY+f++++q Gty +H++ +++G+ G+lii++p+ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 121 GPAGITQCPIPVGGTYTYQFSLDGQFGTYCKpPAHYESLRVEGINGPLIIHSPR 174 *****************************9637******************996 PP AA1.hmm 114 s..kekydvddeelvillsdwyhktaeell.......ken.atgaepapdslli 157 + k+k d+d +e+v++l+dw+h+ a++++ ++p p+s+li 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 175 DplKRKIDFD-QEMVLMLTDWFHTPADQIVpqilshtG-YhGFPTPPSPNSALI 226 6444499999.889****************99886532.235667777****** PP AA1.hmm 158 nGkgrlync......s....sklevlkvepgktyrlrlinaalnaeltfsidnH 201 nG g+ +c + ++ +++v +g + r rlin +++a+++fs dnH 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 227 NGIGEW-DCrfatttQrcrqNAPPEFTVVAGSRIRYRLINSGSHAMFFFSADNH 279 ****96.56466554145544456****************************** PP AA1.hmm 202 kltvieaDgvyvkp....yevdslqiapGqrydvllk..anqsagnywirasld 249 +l+v eaD+++v+ ++v+ + + Gqry+v+++ n++ +++++ra++d 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 280 TLNVTEADATPVHGrefiTNVHRVIFHNGQRYSVIVNipLNEAGSSFYLRAKMD 333 ************97555567999**************98788779******998 PP AA1.hmm 250 s...a....afdnttalailrYkg.....assas.................... 271 + + ta+ai+r + + + 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 334 PdcwPwvtnD-LQGTAYAIIRVVApgsrqR---Qvpskqrpttqdwaektnnqc 383 8666154533.57899*****977554440...155666777888888889999 PP AA1.hmm 272 ...................................................... 271 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 384 mdldpnslvpiipvrvptavlgtgtftnalgfkvlssppassnpssgktrtakr 437 99**************************************************** PP AA1.hmm 272 ..........................................nvsf.vepstsl 282 n++ +p++++ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 438 qldlsghqmipplgmnttspgqtnntqippfppqtvgrffinNITAvLTPQQPV 491 **9999999999999999999999999999999999999999555525667777 PP AA1.hmm 283 lea.y...sgv....detka..................klklnhp..lhghdfv 308 l++ + sg+ + ++ +nhp lhg d++ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 492 LHDlVhggSGIvnssN---IasvvfpelgyydlylvntDAATNHPfhLHGPDMH 542 7774344322253331...134455555555555555566777*********** PP AA1.hmm 309 vv...........nfd.....aedeakrdtvavpkggwvvirfvadnpgvwllh 346 +v + +e++ +rdt++++ g +v+r+++d pgvw+lh 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 543 IVaqgsglptpenL-KtltyrTENPLRRDTMVIQGGTFTVVRINTDLPGVWFLH 595 **887777766540.255555888888*************************** PP AA1.hmm 347 chieaHlsmGla 358 ch+++H+++Gla 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 596 CHMDWHVESGLA 607 **********96 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 217.8 0.1 4.3e-68 4.3e-68 8 291 .. 46 353 .. 40 383 .. 0.83 2 ? 1.0 0.0 0.044 0.044 192 232 .. 506 546 .. 471 549 .. 0.82 3 ? 1.9 0.0 0.023 0.023 104 141 .. 585 622 .. 572 630 .. 0.78 Alignments for each domain: == domain 1 score: 217.8 bits; conditional E-value: 4.3e-68 AA1_3.hmm 8 pktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknn 61 ++++tr+ytl v+++t++pDG+ +e+l++n+q+Pgp+iea+ GD+le+tv n+ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 46 TSKTQTRKYTLVVHNTTASPDGFWREVLAINNQMPGPLIEANEGDRLEITVINR 99 56789************************************************* PP AA1_3.hmm 62 lkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGtswY. 113 l+ ++HwHGi q+ tn++DG +g+tqCpi+ g ++tY+f+ + q+Gt 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 100 LD-SPLTMHWHGIYQNGTNWEDGPAGITQCPIPVGGTYTYQFSLDgQFGTYCKp 152 *8.5688***********************************98769**97642 PP AA1_3.hmm 114 HsHyslQyadGvlGplvinGP...asanydvdl.gpllltdwshesafelveea 163 +Hy +G+ Gpl+i+ P + + d d +l+ltdw+h+ a+++v + 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 153 PAHYESLRVEGINGPLIIHSPrdpLKRKIDFDQeMVLMLTDWFHTPADQIVPQI 206 69*****************99443356777776246789************999 PP AA1_3.hmm 164 e......asggppvadniLingknkvkkskk.....eeegeysevklekgkkyr 206 +pp+ ++ Ling ++++++ + ++++ e+++ +g + r 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 207 LshtgyhGFPTPPSPNSALINGIGEWDCRFAtttqrCRQNAPPEFTVVAGSRIR 260 86665444456799**************88866554445566679********* PP AA1_3.hmm 207 lrlintsvdstfkfsidgHkltviaaDfvpiep....yttdslligigqRydvi 256 rlin++++++f fs d+H+l+v +aD p++ +++ ++ + gqRy vi 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 261 YRLINSGSHAMFFFSADNHTLNVTEADATPVHGrefiTNVHRVIFHNGQRYSVI 314 *******************************97332234678999********* PP AA1_3.hmm 257 veanqe..eenywlraelaeaCskl..naeekeikailr 291 v+ + ++++lra+++ +C + n+ + ++ ai+r 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 315 VNIPLNeaGSSFYLRAKMDPDCWPWvtNDLQGTAYAIIR 353 997544449*************87622334444555554 PP == domain 2 score: 1.0 bits; conditional E-value: 0.044 AA1_3.hmm 192 geysevklekgkkyrlrlintsvdstfkfsidgHkltviaa 232 +++++v + + y l l+nt + + f++ g +++++a+ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 506 SNIASVVFPELGYYDLYLVNTDAATNHPFHLHGPDMHIVAQ 546 566677777778899**********************9985 PP == domain 3 score: 1.9 bits; conditional E-value: 0.023 AA1_3.hmm 104 ratqyGtswYHsHyslQyadGvlGplvinGPasanydv 141 +++ G + H H G++G lv++ + +++++ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 585 NTDLPGVWFLHCHMDWHVESGLAGVLVVQPEKVKSFEI 622 5556688899*****************99877777766 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 193.6 0.0 9.7e-61 9.7e-61 2 260 .. 70 356 .. 69 401 .. 0.89 2 ! 4.5 0.0 0.0033 0.0033 149 194 .. 500 545 .. 470 561 .. 0.83 3 ! 6.7 0.0 0.00072 0.00072 74 106 .. 585 616 .. 571 625 .. 0.79 Alignments for each domain: == domain 1 score: 193.6 bits; conditional E-value: 9.7e-61 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGa 55 r+v+++N+q P p ie+n+gdr+e+++ N+l d++ ++H+HG++qngtn+ DG+ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 70 REVLAINNQMPGPLIEANEGDRLEITVINRL-DSPLTMHWHGIYQNGTNWEDGP 122 89*****************************.99******************** PP AA1_2.hmm 56 smvtqCpippgetltYeftveeqvGtYWy.HsHskgqYeDGlrgpliiedkeep 108 +++tqCpip g t+tY+f+++ q GtY +H+++ + G+ gplii+ +++p 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 123 AGITQCPIPVGGTYTYQFSLDGQFGTYCKpPAHYESLRVEGINGPLIIHSPRDP 176 ***************************86369******************9988 PP AA1_2.hmm 109 y....eydeeltltlsdwYheeskelvkeflskynptg..aepipdsllv.... 152 ++d+e++l+l+dw+h+ +++v ++ls++ +g + p p+s+l+ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 177 LkrkiDFDQEMVLMLTDWFHTPADQIVPQILSHTGYHGfpTPPSPNSALIngig 230 77777**************************99655552278************ PP AA1_2.hmm 153 .............netenatlevepgktYllriinvgafasqylvledhemtiv 193 +++ +++v +g + + r+in g a+++++ ++h++++ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 231 ewdcrfatttqrcRQNAPPEFTVVAGSRIRYRLINSGSHAMFFFSADNHTLNVT 284 **********9988888889********************************** PP AA1_2.hmm 194 evDGvdvepse....vdslyiavaQRysvLvkak.ndtsknyalvakmdetmld 242 e+D++ v+ e v+ + +QRysv+v+ n++ +++ l akmd + + 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 285 EADATPVHGREfitnVHRVIFHNGQRYSVIVNIPlNEAGSSFYLRAKMDPDCWP 338 *******987655447778899*********98626788*************** PP AA1_2.hmm 243 vvpddlqlnvtstlvydk 260 v +dlq + + ++ + 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 339 WVTNDLQGTAYAIIRVVA 356 ******988887776554 PP == domain 2 score: 4.5 bits; conditional E-value: 0.0033 AA1_2.hmm 149 sllvnetenatlevepgktYllriinvgafasqylvledhemtive 194 s +vn+++ a++ + + Y l ++n+ a +++ ++l + +m+iv 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 500 SGIVNSSNIASVVFPELGYYDLYLVNTDAATNHPFHLHGPDMHIVA 545 5677999999999999999*************************97 PP == domain 3 score: 6.7 bits; conditional E-value: 0.00072 AA1_2.hmm 74 tveeqvGtYWyHsHskgqYeDGlrgpliiedke 106 + ++ G + +H+H++ + e Gl g+l++++++ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 585 N-TDLPGVWFLHCHMDWHVESGLAGVLVVQPEK 616 3.36789***********************987 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 201.5 0.0 3.5e-63 3.5e-63 2 272 .. 64 358 .. 63 402 .. 0.83 2 ? -0.2 0.0 0.093 0.093 180 211 .. 517 548 .. 496 561 .. 0.79 3 ? 0.9 0.0 0.046 0.046 86 113 .. 586 613 .. 572 619 .. 0.82 Alignments for each domain: == domain 1 score: 201.5 bits; conditional E-value: 3.5e-63 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglf 55 spDGf r++ +n+++pgpli +++gd+++i+v+n+L+ + ++hwhg++ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 64 SPDGFWREVLAINNQMPGPLIEANEGDRLEITVINRLDSP-----LTMHWHGIY 112 7***********************************9876.....589****** PP AA1_1.hmm 56 qkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwY.HshlstqycdglrG 108 q+gtnw+dgpa +tqCPi g +++y+f++++q Gt+ +h+++ ++g+ G 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 113 QNGTNWEDGPAGITQCPIPVGGTYTYQFSLDGQFGTYCKpPAHYESLRVEGING 166 *************************************97369************ PP AA1_1.hmm 109 alvvydpedplkslydvddestvitladwyhtaakell............klva 150 +l+++ p+dplk+ d+d+e v++l+dw+ht+a ++ +++ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 167 PLIIHSPRDPLKRKIDFDQE-MVLMLTDWFHTPADQIVpqilshtgyhgfPTPP 219 *****************987.699************999999999999888889 PP AA1_1.hmm 151 vadstlinGlgrya....gg....peaelavvnvekgkrYrfrlvsiscdpnft 196 ++s+linG+g + ++ ++ +v +g r r rl++ +++ f 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 220 SPNSALINGIGEWDcrfaTTtqrcRQNAPPEFTVVAGSRIRYRLINSGSHAMFF 273 **********97653321333333334456799********************* PP AA1_1.hmm 197 fsidghnltvieadgvntkp....ltvdsiqifagqrysvvlea..nqevdnYw 244 fs d+h+l+v ead++ ++ ++v+++ gqrysv+++ n++ + ++ 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 274 FSADNHTLNVTEADATPVHGrefiTNVHRVIFHNGQRYSVIVNIplNEAGSSFY 327 ****************988622225789998999*******9965599999*** PP AA1_1.hmm 245 iranpnlgk...ntgfegginsailrykgap 272 +ra+++ t+ +g+ ai+r + 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 328 LRAKMDPDCwpwVTNDLQGTAYAIIRVVAPG 358 ****998877777888889999999986432 PP == domain 2 score: -0.2 bits; conditional E-value: 0.093 AA1_1.hmm 180 krYrfrlvsiscdpnftfsidghnltvieadg 211 Y + lv++ + +n+ f + g +++++ + + 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 517 GYYDLYLVNTDAATNHPFHLHGPDMHIVAQGS 548 569999********************998765 PP == domain 3 score: 0.9 bits; conditional E-value: 0.046 AA1_1.hmm 86 pdqaGtfwYHshlstqycdglrGalvvy 113 +d G ++ H h+ gl G lvv 43546|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 586 TDLPGVWFLHCHMDWHVESGLAGVLVVQ 613 5778999*******************96 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (636 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 128.96 // Query: 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 [L=550] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.4e-55 177.3 0.0 1.8e-55 177.0 0.0 1.1 1 AA1.hmm 4.8e-38 119.0 0.0 1.1e-35 111.3 0.0 3.0 3 AA1_2.hmm 2.1e-35 110.4 0.0 4.2e-34 106.2 0.0 2.2 2 AA1_3.hmm 4.6e-32 99.4 0.0 1.1e-31 98.2 0.0 1.6 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 177.0 0.0 1.8e-55 1.8e-55 100 357 .. 2 511 .. 1 512 [. 0.81 Alignments for each domain: == domain 1 score: 177.0 bits; conditional E-value: 1.8e-55 AA1.hmm 100 adGlrGaliirdpks..kekydvddeelvillsdwyhktaeell......ken.at 146 adG+ G++ii++pk+ k+++d+d e++v++lsdwyh+t+++++ ++ t 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 2 ADGINGPMIIHSPKDplKRSVDFD-EDVVLMLSDWYHNTSSDIVremlseAGHiGT 56 79*********9955444499998.899****************888865223677 PP AA1.hmm 147 gaepapdsllinGkgrlync....s.......sklevlkvepgktyrlrlinaaln 191 a+p ++s+linG g+ nc + ++ ++++++g++ r+rlina+++ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 57 AAAPGANSALINGVGEW-NCslatTtqqckqvTSPPEFTITAGQRIRFRLINAGVH 111 88888**********97.5635440445545655569******************* PP AA1.hmm 192 aeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywi 244 a++++s+d+H l++ eaD ++v p + ++ ++ Gqry+v++++++++ +n+ + 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 112 AMFFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKDagRNFHM 167 *********************9659*******************88888767**** PP AA1.hmm 245 raslds...a....afdnttalailrYkgassas...................... 271 ra++ds + + + ta ++lr +++ ++ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 168 RATMDSdcwSwvpnD-IQDTAFGVLRVVNDNAKPvkiskalpntrgwpqdfpqecl 222 **9999766255534.578999*****887666689999999************** PP AA1.hmm 272 ........................................................ 271 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 223 didpkimvpivkrsvpasvvgsgrfeagfgfqfinntqehlsrsdavkiaeelnld 278 ******************************************************** PP AA1.hmm 272 ........................................................ 271 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 279 wtrdqnlrekkkfvtpsqpvarsadsksaaedrngshviprrsgsgrgethqekss 334 *********88777777777777777777777777777777777777777777777 PP AA1.hmm 272 ..................................................nvsf.v 276 n+s+ + 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 335 plralsnkrqveitheipppfgyrpsllgvtrlagppptpvgtigkyfmnNISWaT 390 77777777777777777777777777777777777777777777777777777745 PP AA1.hmm 277 epstslleay..sgv...detkaklkln..........................hp 301 p +++l+++ gv + hp 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 391 YPYQPVLHDLtpGGVgtiN--------SsrvanvifptpewydlylvnvdatgsHP 438 5666666663232224331........033333344455555555556667788** PP AA1.hmm 302 ..lhghdfvvv...............nfdaedeakrdtvavpkggwvvirfvadnp 340 lh +d+++v +++++++ +rdtv+vp+ + vvir+ ad p 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 439 yhLHAMDMHIVafgrgfptaerlsqlEYNTDNPLRRDTVVVPPASFVVIRILADIP 494 ***********888777766666555555888888********************* PP AA1.hmm 341 gvwllhchieaHlsmGl 357 g w++hchi +H++ G 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 495 GAWIMHCHIGWHIAGGF 511 *************9997 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 111.3 0.0 1.1e-35 1.1e-35 93 265 .. 2 200 .. 1 242 [. 0.90 2 ? 1.9 0.0 0.021 0.021 151 194 .. 407 450 .. 378 459 .. 0.83 3 ? 2.0 0.0 0.02 0.02 77 114 .. 492 530 .. 477 545 .. 0.79 Alignments for each domain: == domain 1 score: 111.3 bits; conditional E-value: 1.1e-35 AA1_2.hmm 93 eDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflskynp..tg 142 DG+ gp+ii+ +++p ++de+++l+lsdwYh++s+++v+e+ls++ t+ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 2 ADGINGPMIIHSPKDPLkrsvDFDEDVVLMLSDWYHNTSSDIVREMLSEAGHigTA 57 6*************8887888***************************97651166 PP AA1_2.hmm 143 aepipdsllv..................netenatlevepgktYllriinvgafas 180 a p +s+l+ + t+ ++++++g++ ++r+in g+ a+ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 58 AAPGANSALIngvgewncslatttqqckQVTSPPEFTITAGQRIRFRLINAGVHAM 113 7788899999**************99988889999********************* PP AA1_2.hmm 181 qylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalva 234 ++ ++++h ++i e+D++ v ps ++ + +QRysv++++k++ + +n+++ a 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 114 FFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKdAGRNFHMRA 169 ******************9953889*******************98466******* PP AA1_2.hmm 235 kmdetmldvvpddlqlnvtstlvydksaala 265 +md++ + vp+d+q + +l+ +++a++ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 170 TMDSDCWSWVPNDIQDTAFGVLRVVNDNAKP 200 ***************9999988776666655 PP == domain 2 score: 1.9 bits; conditional E-value: 0.021 AA1_2.hmm 151 lvnetenatlevepgktYllriinvgafasqylvledhemtive 194 +n+++ a++ + + + Y l ++nv a s+ +l +m+iv 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 407 TINSSRVANVIFPTPEWYDLYLVNVDATGSHPYHLHAMDMHIVA 450 67888889999999999***********************9996 PP == domain 3 score: 2.0 bits; conditional E-value: 0.02 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.epyeydee 114 + G++ +H+H + + G+ g ++++++ +e ee 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 492 DIPGAWIMHCHIGWHIAGGFAGIVVVQPDAvRRFEIPEE 530 5579999********************987556666555 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 106.2 0.0 4.2e-34 4.2e-34 122 292 .. 2 193 .. 1 211 [. 0.84 2 ? 1.8 0.0 0.024 0.024 103 156 .. 489 542 .. 477 547 .. 0.82 Alignments for each domain: == domain 1 score: 106.2 bits; conditional E-value: 4.2e-34 AA1_3.hmm 122 adGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae......as 166 adG+ Gp++i+ P s ++d+d+ +l+l+dw+h++ +++v+e+ + 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 2 ADGINGPMIIHSPkdplkRSVDFDEDV-VLMLSDWYHNTSSDIVREMLseaghiGT 56 79**********955444478899986.789***********99999877776556 PP AA1_3.hmm 167 ggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrlintsvds 216 +++p a++ Ling +++++s + ++ ++ e+++++g++ r+rlin++v++ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 57 AAAPGANSALINGVGEWNCSLAtttqqcKQVTSPPEFTITAGQRIRFRLINAGVHA 112 677999*************9886666555555666799****************** PP AA1_3.hmm 217 tfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe..eenywlr 269 +f +s+d+H l++ +aD p+ p + +++++ gqRy vi++++++ +n+ +r 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 113 MFFYSVDEHMLNITEADSTPVYgPSDFRHVWLHNGQRYSVIIQTKEKdaGRNFHMR 168 *********************759999******************998899***** PP AA1_3.hmm 270 aelaeaCskl..naeekeikailrY 292 a+++++C ++ n+ ++++ ++lr 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 169 ATMDSDCWSWvpNDIQDTAFGVLRV 193 *******997444556666666665 PP == domain 2 score: 1.8 bits; conditional E-value: 0.024 AA1_3.hmm 103 fratqyGtswYHsHyslQyadGvlGplvinGPasanydvdlgpllltdwshesa 156 a+ G H H+ a G +G +v++ a +++ + + l d +e + 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 489 ILADIPGAWIMHCHIGWHIAGGFAGIVVVQPDAVRRFEIPEESIALCDSRTEPM 542 55666688899*******************99******9999999998877765 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 98.2 0.0 1.1e-31 1.1e-31 103 253 .. 2 175 .. 1 208 [. 0.83 2 ? -3.2 0.0 0.8 0.8 84 113 .. 489 518 .. 478 521 .. 0.78 Alignments for each domain: == domain 1 score: 98.2 bits; conditional E-value: 1.1e-31 AA1_1.hmm 103 cdglrGalvvydpedplkslydvddestvitladwyhtaakell............ 146 dg+ G+++++ p+dplk+ d+d+ + v++l+dwyh++++++ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 2 ADGINGPMIIHSPKDPLKRSVDFDE-DVVLMLSDWYHNTSSDIVremlseaghigt 56 69*********************85.689************999999999999988 PP AA1_1.hmm 147 klvavadstlinGlgrya...ggpeaelavv......nvekgkrYrfrlvsiscdp 193 ++++ a+s+linG+g ++ ++++++ v ++++g+r rfrl++ ++ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 57 AAAPGANSALINGVGEWNcslATTTQQCKQVtsppefTITAGQRIRFRLINAGVHA 112 78899***********995443444444443222222799**************** PP AA1_1.hmm 194 nftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqe..vdnYwir 246 f +s+d+h l++ ead++ + p + ++ + gqrysv+++++++ +n+ +r 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 113 MFFYSVDEHMLNITEADSTPVyGPSDFRHVWLHNGQRYSVIIQTKEKdaGRNFHMR 168 ******************987369******************998751156***** PP AA1_1.hmm 247 anpnlgk 253 a++++ 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 169 ATMDSDC 175 *998765 PP == domain 2 score: -3.2 bits; conditional E-value: 0.8 AA1_1.hmm 84 kvpdqaGtfwYHshlstqycdglrGalvvy 113 ++d G++ H h+ g G +vv 276|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 489 ILADIPGAWIMHCHIGWHIAGGFAGIVVVQ 518 5577889999********999999999885 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (550 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 107.47 // Query: 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 [L=690] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.1e-101 326.8 0.6 6.3e-101 326.5 0.6 1.1 1 AA1.hmm 3.2e-76 244.5 3.1 1.7e-74 238.8 0.5 2.5 2 AA1_3.hmm 1.2e-72 232.8 0.4 1.5e-69 222.6 0.2 2.8 3 AA1_2.hmm 7.4e-71 226.7 0.3 6.1e-70 223.7 0.2 2.0 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 326.5 0.6 6.3e-101 6.3e-101 6 357 .. 71 641 .. 66 642 .. 0.85 Alignments for each domain: == domain 1 score: 326.5 bits; conditional E-value: 6.3e-101 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlr 52 + + rsv+++N+q+PgP+ieanegD +++tV+N + e++tiHwhGl 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 71 TaapdgFLRSVLAINNQIPGPLIEANEGDSLEITVVNY-SGEPLTIHWHGLY 121 4445557799***************************9.47*********** PP AA1.hmm 53 qlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlr 104 q+gtnw+DG+ g+tqcpi+ g s+tY+f+v++q Gt+wyH+H+ adG++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 122 QNGTNWEDGPTGITQCPIPVGVSYTYKFNVDNQFGTFWYHAHSLNTMADGIH 173 **************************************************** PP AA1.hmm 105 Galiirdpkske....kydvddeelvillsdwyhktaeell......ken.. 144 G++i+++p+ + d+d ee+v++l+dwyh+t+++++ + 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 174 GPFIVHSPR--DplvrGIDFD-EEVVLVLADWYHNTSAQIVhdlfytD-Qgy 221 ******994..3457789988.999****************9999962.444 PP AA1.hmm 145 .atgaepapdsllinGkgrlync.....s......sklevlkvepgktyrlr 184 t ++p p+s+++nG g+ +c + + l ++ v +g++ r+r 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 222 fGTPGTPSPNSVVMNGVGEW-DCkyattEqfctptTLLPEFPVVAGNKIRFR 272 67777888**********96.674555415664545567************* PP AA1.hmm 185 linaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllka 235 lin +++++++fs d+H+++v eaD+++v p +v+ l+ + Gqry+v+++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 273 LINSGSHSMIFFSADGHEMNVTEADATPVYgPSNVHRLKFHNGQRYSVIVTI 324 ****************************9659*******************9 PP AA1.hmm 236 nqsa..gnywiraslds...a....afdnttalailrYkg.....assas.. 271 +q++ ++++iras+d+ a + ++ta++i++ + + s 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 325 DQKEagSSFYIRASVDTdcwAwvsaD-LQKTARGIVKVLQpgktvS---Ste 372 9988767******9999666255544.4677888888866555541...145 PP AA1.hmm 272 .................................................... 271 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 373 nqvrpnsndwsdpangpcidlepdsltpiipksvpstvtgagqfanafgfvs 424 567788889999999************************************* PP AA1.hmm 272 .................................................... 271 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 425 iltgdkvpnppsqpnnngstgnitgsskalgsvkgsaqnddipiilkrqist 476 **************************************************** PP AA1.hmm 272 ......................................nvsf.vepstslle 284 nv++ + p +++l+ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 477 gvdistmstgpaalppnytivpglpsiprkargaffvnNVTWaTYPYQPILH 528 *************************************999996778999999 PP AA1.hmm 285 ay..sgv......detka..................klklnhp..lhghdfv 308 ++ gv ++ ++h lhg+d++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 529 DLapGGVgkvnseR---VanvvyptadwydlylvnmDAAVAHTyhLHGMDMH 577 95453335443330...2344444555555555555555559999******* PP AA1.hmm 309 vv...........nfd.....aedeakrdtvavpkggwvvirfvadnpgvwl 344 +v + ++++ +rdt+a+ +g +vv r+ ad pgvw+ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 578 IVaigqgqptpqnL-TnlvynTKNPLRRDTIAIAPGTYVVARLLADLPGVWA 628 **888777665540.155555888888************************* PP AA1.hmm 345 lhchieaHlsmGl 357 +hch+ +Hl++G 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 629 MHCHFGWHLAIGF 641 ***********97 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 238.8 0.5 1.7e-74 1.7e-74 10 293 .. 57 362 .. 51 380 .. 0.88 2 ! 5.2 0.1 0.0022 0.0022 92 145 .. 608 661 .. 529 680 .. 0.83 Alignments for each domain: == domain 1 score: 238.8 bits; conditional E-value: 1.7e-74 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknn 61 + tr+y++ +t++t+apDG+ +++l++n+q+Pgp+iea+ GD+le+tv+n 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 57 EKLTRKYEFVITNTTAAPDGFLRSVLAINNQIPGPLIEANEGDSLEITVVNY 108 5679**********************************************97 PP AA1_3.hmm 62 lkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGtsw 112 + +iHwHG+ q+ tn++DG +g+tqCpi+ g s+tY+f+++ q+Gt w 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 109 S-GEPLTIHWHGLYQNGTNWEDGPTGITQCPIPVGVSYTYKFNVDnQFGTFW 159 5.58899************************************9549***** PP AA1_3.hmm 113 YHsHyslQyadGvlGplvinGPas.....anydvdlgpllltdwshesafel 159 YH+H +adG+ Gp +++ P ++d+++ +l+l+dw+h++ ++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 160 YHAHSLNTMADGIHGPFIVHSPRDplvrgIDFDEEV-VLVLADWYHNTSAQI 210 *********************965332224666664.6789********999 PP AA1_3.hmm 160 veeae.......asggppvadniLingknkvkkskk......eeegeysevk 198 v++ + g+p+ +++++ng ++++++ + + ++ e+ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 211 VHDLFytdqgyfGTPGTPSPNSVVMNGVGEWDCKYAtteqfcTPTTLLPEFP 262 998877666766677889***************88888888777888889** PP AA1_3.hmm 199 lekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligi 249 + +g+k r+rlin++++s++ fs dgH+++v +aD p+ p +++ l + 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 263 VVAGNKIRFRLINSGSHSMIFFSADGHEMNVTEADATPVYgPSNVHRLKFHN 314 ***************************************65999******** PP AA1_3.hmm 250 gqRydviveanqe..eenywlraelaeaCskl..naeekeikailrYe 293 gqRy viv+ +q+ +++++ra+++++C ++ ++ +k++++i++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 315 GQRYSVIVTIDQKeaGSSFYIRASVDTDCWAWvsADLQKTARGIVKVL 362 ***********998899************9973235566777787654 PP == domain 2 score: 5.2 bits; conditional E-value: 0.0022 AA1_3.hmm 92 piapgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydvdl 143 +iapg+ ++ + a+ G H H+ a G +G +v++ + an+++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 608 AIAPGTYVVARLLADLPGVWAMHCHFGWHLAIGFAGVVVVQPDKIANFEIPD 659 699999999999*****************************99999999865 PP AA1_3.hmm 144 gp 145 ++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 660 EN 661 55 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 222.6 0.2 1.5e-69 1.5e-69 2 254 .. 79 357 .. 78 384 .. 0.92 2 ! 6.6 0.0 0.00076 0.00076 161 197 .. 547 583 .. 507 599 .. 0.78 3 ? -0.6 0.0 0.12 0.12 77 109 .. 622 655 .. 608 666 .. 0.79 Alignments for each domain: == domain 1 score: 222.6 bits; conditional E-value: 1.5e-69 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamD 53 r+v+++N+q P p ie+n+gd++e+++ N e+ ++H+HGl+qngtn+ D 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 79 RSVLAINNQIPGPLIEANEGDSLEITVVNYS-GEPLTIHWHGLYQNGTNWED 129 899**************************87.6799**************** PP AA1_2.hmm 54 GasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedk 105 G++++tqCpip g ++tY+f+v++q Gt+WyH+Hs + DG+ gp+i++ + 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 130 GPTGITQCPIPVGVSYTYKFNVDNQFGTFWYHAHSLNTMADGIHGPFIVHSP 181 **************************************************** PP AA1_2.hmm 106 eepy....eydeeltltlsdwYheeskelvke.flsk..ynptgaepipdsl 150 ++p ++dee++l+l+dwYh++s ++v++ f + y t p p+s+ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 182 RDPLvrgiDFDEEVVLVLADWYHNTSAQIVHDlFYTDqgYFGTPGTPSPNSV 233 *9988999************************7777645556677899**** PP AA1_2.hmm 151 lv..................netenatlevepgktYllriinvgafasqylv 184 ++ +t +++v +g++ ++r+in g ++ +++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 234 VMngvgewdckyatteqfctPTTLLPEFPVVAGNKIRFRLINSGSHSMIFFS 285 ****************99987888889************************* PP AA1_2.hmm 185 ledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalva 234 ++hem++ e+D++ v ps+v+ l+ +QRysv+v+ ++ + +++ + a 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 286 ADGHEMNVTEADATPVYgPSNVHRLKFHNGQRYSVIVTIDQKeAGSSFYIRA 337 **************9853899*****************98873669****** PP AA1_2.hmm 235 kmdetmldvvpddlqlnvts 254 ++d++ + v +dlq + 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 338 SVDTDCWAWVSADLQKTARG 357 ************99987655 PP == domain 2 score: 6.6 bits; conditional E-value: 0.00076 AA1_2.hmm 161 evepgktYllriinvgafasqylvledhemtivevDG 197 + Y l ++n+ a ++++ +l + +m+iv + 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 547 VYPTADWYDLYLVNMDAAVAHTYHLHGMDMHIVAIGQ 583 44556679*************************9854 PP == domain 3 score: -0.6 bits; conditional E-value: 0.12 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.epy 109 + G + +H+H + + G+ g++++++++ +++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 622 DLPGVWAMHCHFGWHLAIGFAGVVVVQPDKiANF 655 56788899*******************9985555 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 223.7 0.2 6.1e-70 6.1e-70 2 252 .. 73 342 .. 72 375 .. 0.91 2 ? 0.4 0.0 0.061 0.061 178 216 .. 550 588 .. 533 597 .. 0.74 Alignments for each domain: == domain 1 score: 223.7 bits; conditional E-value: 6.1e-70 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 +pDGf rs+ +n+++pgpli +++gd+++i+vvn + +ihwhg 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 73 APDGFLRSVLAINNQIPGPLIEANEGDSLEITVVNYSGE-----PLTIHWHG 119 7*********************************97554.....579***** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdg 105 l+q+gtnw+dgp+ +tqCPi g s++y+f+v++q GtfwYH+h + + dg 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 120 LYQNGTNWEDGPTGITQCPIPVGVSYTYKFNVDNQFGTFWYHAHSLNTMADG 171 **************************************************** PP AA1_1.hmm 106 lrGalvvydpedplkslydvddestvitladwyhtaakell........... 146 ++G+++v+ p+dpl + d+d+e v+ ladwyh+++ ++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 172 IHGPFIVHSPRDPLVRGIDFDEE-VVLVLADWYHNTSAQIVhdlfytdqgyf 222 ********************865.799***********999999****9999 PP AA1_1.hmm 147 ..klvavadstlinGlgryagg.........peaelavvnvekgkrYrfrlv 187 ++ ++s ++nG+g + + p++ l v +g++ rfrl+ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 223 gtPGTPSPNSVVMNGVGEWDCKyatteqfctPTTLLPEFPVVAGNKIRFRLI 274 877789***********98744333455555788888999************ PP AA1_1.hmm 188 siscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanq 238 + +++ fs dgh+++v ead++ + p +v++++ gqrysv+++ +q 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 275 NSGSHSMIFFSADGHEMNVTEADATPVyGPSNVHRLKFHNGQRYSVIVTIDQ 326 ************************986369*********************9 PP AA1_1.hmm 239 evd..nYwiranpnlg 252 + + ++ira+ ++ 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 327 KEAgsSFYIRASVDTD 342 875348*****98875 PP == domain 2 score: 0.4 bits; conditional E-value: 0.061 AA1_1.hmm 178 kgkrYrfrlvsiscdpnftfsidghnltvieadgvntkp 216 + Y + lv++ + +t+ + g +++++ + + +p 225169|Melame1_GeneCatalog_proteins_20180827.aa.fasta|AA1 550 TADWYDLYLVNMDAAVAHTYHLHGMDMHIVAIGQGQPTP 588 45679999*************999999999876555555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (690 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 112.47 // Query: 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 [L=708] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.9e-102 329.3 0.0 1.3e-101 328.8 0.0 1.2 1 AA1.hmm 1.8e-80 258.5 0.2 2.2e-79 254.9 0.3 2.0 2 AA1_3.hmm 2.1e-75 241.9 0.0 2.3e-74 238.4 0.0 2.1 2 AA1_2.hmm 6e-71 227.0 0.0 1.3e-70 225.9 0.0 1.5 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 328.8 0.0 1.3e-101 1.3e-101 6 357 .. 67 669 .. 62 670 .. 0.85 Alignments for each domain: == domain 1 score: 328.8 bits; conditional E-value: 1.3e-101 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlg 55 + + r+v+++Ngq+PgP+i+anegD++++tV N++ s g+t+HwhGl q+g 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 67 TaaldgFLRPVLAINGQIPGPLIQANEGDRLEITVINQM-SVGLTLHWHGLYQNG 120 4555557799****************************9.79************* PP AA1.hmm 56 tnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGalii 109 tnw+DGv gvtqcpi+p g sftYef++++q Gt+wyHsH++ adG+ G+lii 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 121 TNWEDGVTGVTQCPIPPdGGSFTYEFSLHGQFGTFWYHSHHQNLMADGINGPLII 175 ******************************************************* PP AA1.hmm 110 rdpks..kekydvddeelvillsdwyhktaeell....ken...atgaepapdsl 155 ++p++ k++ d+d +e+v++l+dwyh+t+++++ +e+ t a+p ++s+ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 176 HSPRDplKRHIDFD-QEVVLMLADWYHNTSTDIVehmlSEAgyfGTPAAPGANSA 229 *9966444499999.899***************9888833343455666669*** PP AA1.hmm 156 linGkgrlyncs...........sklevlkvepgktyrlrlinaalnaeltfsid 199 linG g+ ncs ++ ++++++g + r+rl+na+++a++++s+d 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 230 LINGVGEW-NCSqaskaqeceqiHSPPEFTFKAGDKIRFRLVNAGVHAMFFYSVD 283 ******97.5633444555655644569*************************** PP AA1.hmm 200 nHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywiraslds. 250 +H+l+v eaDg+ v p ++ + ++ Gqry+v++k+++++ +++++ra++ds 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 284 EHTLNVTEADGTGVYgPSAMHRVWLHNGQRYSVVIKTKKEDagRSFYLRATMDSd 338 ***********9985499******************88888767******99997 PP AA1.hmm 251 ..a....afdnttalailrYkgassas............................ 271 a + + ta +ilr + +s++ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 339 cwAwvpdD-IQLTAFGILRLVDGESKRqtistarpqtqdwpdeilgdcvdlptss 392 66255644.57899******6644444578888999999**************** PP AA1.hmm 272 ....................................................... 271 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 393 lvpilqesvptsvagfggfkagfgfqfinntalhitraeavrlaqqanssglslt 447 ******************************************************* PP AA1.hmm 272 ....................................................... 271 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 448 tnprteeletsndlgsflrngsrtsrtllnarsktvqglwkagdfeasnhdlsrr 502 *****************99999999999999999999999999999999999999 PP AA1.hmm 272 ........................................nvsf.vepstsllea 285 n+s+ + p ++l++ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 503 qvlvgqddlprgnrtsplgvtrtggppptpvgtigkfflnNISWaTYPYRPVLHD 557 9999999999999999999999999999999999999999888856677788877 PP AA1.hmm 286 y..sgv...detka.klkln....................hp..lhghdfvvv.. 310 + gv ++++ + hp lh d+++v 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 558 LtpGGVgavNDSNVaN---ViyptsdwydlylanidpagsHPyhLHALDMHIVae 609 4342335542222231...123345555566667778889*************87 PP AA1.hmm 311 .............nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaH 352 ++++ ++ +rdt++vp+ + +v+r++ad pg w++hchi +H 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 610 gkglptpanlanvTYNTVNPLRRDTIVVPPASFTVLRLRADIPGAWIVHCHIGWH 664 7777766655544444667777********************************* PP AA1.hmm 353 lsmGl 357 ++ G 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 665 IAAGF 669 **997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 254.9 0.3 2.2e-79 2.2e-79 9 294 .. 52 359 .. 47 377 .. 0.86 2 ? 1.2 0.0 0.038 0.038 94 141 .. 638 685 .. 633 694 .. 0.84 Alignments for each domain: == domain 1 score: 254.9 bits; conditional E-value: 2.2e-79 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlk 63 + +tr+yt++vte+t+a DG+ +++l++ngq+Pgp+i+a+ GD+le+tv n+++ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 52 AKPKTRKYTFHVTETTAALDGFLRPVLAINGQIPGPLIQANEGDRLEITVINQMS 106 5679*************************************************98 PP AA1_3.hmm 64 knGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefrat.qyGtswYHsH 116 G ++HwHG+ q+ tn++DGv+gvtqCpi+p g sftYef+ + q+Gt wYHsH 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 107 -VGLTLHWHGLYQNGTNWEDGVTGVTQCPIPPdGGSFTYEFSLHgQFGTFWYHSH 160 .8*****************************9789******9755********** PP AA1_3.hmm 117 yslQyadGvlGplvinGP...asanydvdlg.pllltdwshesafelveeae... 164 ++ +adG+ Gpl+i+ P + + d d + +l+l+dw+h++ +++ve++ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 161 HQNLMADGINGPLIIHSPrdpLKRHIDFDQEvVLMLADWYHNTSTDIVEHMLsea 215 ****************99443355666666415789***********99998777 PP AA1_3.hmm 165 ...asggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrli 210 + ++p a++ Ling +++++s++ e+ ++ e+++++g k r+rl+ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 216 gyfGTPAAPGANSALINGVGEWNCSQAskaqecEQIHSPPEFTFKAGDKIRFRLV 270 76555667999*************99877766555566667************** PP AA1_3.hmm 211 ntsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe.. 262 n++v+++f +s+d+H+l+v +aD + p ++ ++++ gqRy v++++++e 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 271 NAGVHAMFFYSVDEHTLNVTEADGTGVYgPSAMHRVWLHNGQRYSVVIKTKKEda 325 **************************9658999******************9988 PP AA1_3.hmm 263 eenywlraelaeaCskl..naeekeikailrYee 294 ++++lra+++++C ++ ++ + ++ +ilr + 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 326 GRSFYLRATMDSDCWAWvpDDIQLTAFGILRLVD 359 99************98733355556667776544 PP == domain 2 score: 1.2 bits; conditional E-value: 0.038 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydv 141 +p + ++ + ra+ G H H+ a+G +G +v++ a +++++ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 638 PPASFTVLRLRADIPGAWIVHCHIGWHIAAGFAGVVVVQPDAIKEFQI 685 5666677788999999999*******************9888887765 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 238.4 0.0 2.3e-74 2.3e-74 2 267 .. 75 366 .. 74 424 .. 0.90 2 ? 1.0 0.0 0.038 0.038 77 107 .. 650 681 .. 636 692 .. 0.79 Alignments for each domain: == domain 1 score: 238.4 bits; conditional E-value: 2.3e-74 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGas 56 r+v+++Ngq P p i++n+gdr+e+++ N++ +lH+HGl+qngtn+ DG++ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 75 RPVLAINGQIPGPLIQANEGDRLEITVINQM-SVGLTLHWHGLYQNGTNWEDGVT 128 899****************************.8899******************* PP AA1_2.hmm 57 mvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeepy. 109 +vtqCpipp g ++tYef+++ q Gt+WyHsH+++ DG+ gplii+ +++p 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 129 GVTQCPIPPdGGSFTYEFSLHGQFGTFWYHSHHQNLMADGINGPLIIHSPRDPLk 183 *******984689************************************997777 PP AA1_2.hmm 110 ...eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv....... 152 ++d+e++l+l+dwYh++s+++v+++ls+ y t a p +s+l+ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 184 rhiDFDQEVVLMLADWYHNTSTDIVEHMLSEagYFGTPAAPGANSALIngvgewn 238 778***************************955556778888899999******* PP AA1_2.hmm 153 ...........netenatlevepgktYllriinvgafasqylvledhemtivevD 196 + ++ ++++++g + ++r++n g+ a+++ ++++h++++ e+D 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 239 csqaskaqeceQIHSPPEFTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEAD 293 ******998876677789************************************* PP AA1_2.hmm 197 Gvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetmldvvpddlq 249 G+ v ps ++ + + +QRysv++k+k++ + +++ l a+md++ + vpdd+q 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 294 GTGVYgPSAMHRVWLHNGQRYSVVIKTKKEdAGRSFYLRATMDSDCWAWVPDDIQ 348 **99638889*****************997366********************** PP AA1_2.hmm 250 lnvtstlvydksaalaea 267 l + l+ + +++ ++ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 349 LTAFGILRLVDGESKRQT 366 *99998887666555554 PP == domain 2 score: 1.0 bits; conditional E-value: 0.038 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.e 107 + G++ +H+H + + G+ g+++++++ + 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 650 DIPGAWIVHCHIGWHIAAGFAGVVVVQPDAiK 681 5579999********************98743 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 225.9 0.0 1.3e-70 1.3e-70 3 252 .. 70 338 .. 68 378 .. 0.87 2 ? -3.2 0.0 0.76 0.76 85 113 .. 648 676 .. 636 681 .. 0.78 Alignments for each domain: == domain 1 score: 225.9 bits; conditional E-value: 1.3e-70 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqk 57 DGf r + +ng++pgpli++++gd+++i+v+n+ m ++hwhgl+q+ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 70 LDGFLRPVLAINGQIPGPLIQANEGDRLEITVINQ-----MSVGLTLHWHGLYQN 119 6********************************97.....668899********* PP AA1_1.hmm 58 gtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqycdglrGalv 111 gtnw+dg++ vtqCPi p g sf+y+f++++q GtfwYHsh+++ + dg+ G+l+ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 120 GTNWEDGVTGVTQCPIPPdGGSFTYEFSLHGQFGTFWYHSHHQNLMADGINGPLI 174 ****************99678********************************** PP AA1_1.hmm 112 vydpedplkslydvddestvitladwyhtaakell............klvavads 154 ++ p+dplk+ d+d+e v++ladwyh++++++ +++ a+s 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 175 IHSPRDPLKRHIDFDQE-VVLMLADWYHNTSTDIVehmlseagyfgtPAAPGANS 228 **************987.699***********99989999999997777799*** PP AA1_1.hmm 155 tlinGlgryagg...peaelavv......nvekgkrYrfrlvsiscdpnftfsid 200 +linG+g ++ + +++e + + ++g + rfrlv+ ++ f +s+d 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 229 ALINGVGEWNCSqasKAQECEQIhsppefTFKAGDKIRFRLVNAGVHAMFFYSVD 283 ********9955122333344432222226899********************** PP AA1_1.hmm 201 ghnltvieadgvnt.kpltvdsiqifagqrysvvleanqevd..nYwiranpnlg 252 +h+l+v eadg+ + p ++++ + gqrysvv+++++e + +++ra++++ 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 284 EHTLNVTEADGTGVyGPSAMHRVWLHNGQRYSVVIKTKKEDAgrSFYLRATMDSD 338 ***********976379*******************9886532389999998875 PP == domain 2 score: -3.2 bits; conditional E-value: 0.76 AA1_1.hmm 85 vpdqaGtfwYHshlstqycdglrGalvvy 113 +d G++ H h+ g G +vv 3802|Puctr1_GeneCatalog_proteins_20131203.aa.fasta|AA1 648 RADIPGAWIVHCHIGWHIAAGFAGVVVVQ 676 4677899999**************99995 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (708 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 113.96 // Query: 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 [L=732] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.6e-98 318.6 2.3 8.1e-81 260.4 0.6 2.1 2 AA1.hmm 1.2e-76 245.9 1.8 9.7e-56 177.2 0.4 2.6 3 AA1_3.hmm 2.6e-69 221.8 2.2 2.8e-56 179.0 0.1 3.6 4 AA1_2.hmm 1.2e-67 216.2 2.5 1.3e-55 176.7 0.5 2.6 3 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 57.8 0.0 3e-19 3e-19 6 55 .. 70 123 .. 65 129 .. 0.86 2 ! 260.4 0.6 8.1e-81 8.1e-81 48 356 .. 158 692 .. 153 694 .. 0.85 Alignments for each domain: == domain 1 score: 57.8 bits; conditional E-value: 3e-19 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrq 53 k + r+v+++Ngq+PgP+ieanegD++++tV Nk+ + ++t+HwhGl q 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 70 KaaldgFLRQVMAINGQIPGPLIEANEGDRLEITVINKM-NIELTMHWHGLYQ 121 455555789*****************************9.789*********9 PP AA1.hmm 54 lg 55 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 122 AS 123 65 PP == domain 2 score: 260.4 bits; conditional E-value: 8.1e-81 AA1.hmm 48 whGlrqlgtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqy 99 ++ ++q+gtnw+DGv gvtqcpi++ g +tY+f +++q Gt+wyHsH++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 158 FNRVQQNGTNWEDGVTGVTQCPIPSnGGIYTYKFDTNGQFGTFWYHSHHQNLM 210 67899******************98899************************* PP AA1.hmm 100 adGlrGaliirdpks..kekydvddeelvillsdwyhktaeell....ken.. 144 adG+ G++ii++p++ k++ d+d +++v++++dwyh+t+++++ +e+ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 211 ADGINGPMIIHSPRDplKRSIDFD-HDVVLMMADWYHNTSSDIVqemlSEAgy 262 ***********9966444499998.788***************9887733343 PP AA1.hmm 145 .atgaepapdsllinGkgrlync....s.......sklevlkvepgktyrlrl 185 t a+p ++ +linG g+ nc + ++ +++v++g++ r+rl 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 263 fGTPAAPGANCALINGVGQW-NCslatTtqqcnqvTSPPKFTVTAGQRIRFRL 314 455556669*********97.563544044554665556************** PP AA1.hmm 186 inaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanq 237 ina+++a+++fs+d+H l++ eaD + + p + ++ ++ Gqry+v++++++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 315 INAGVHAMFFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTKE 367 *************************998549*******************988 PP AA1.hmm 238 sa..gnywiraslds...a....afdnttalailrYkgassas.......... 271 ++ +n+++ra+++s a + + tal+ilr +++ + 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 368 EDvdRNFYMRATMNSdcwAwvpnD-IQDTALGILRLAHDDARPenvskarpdt 419 88767******9998676255534.68899******87554446778889999 PP AA1.hmm 272 ..................................................... 271 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 420 qgwpqdfpqecididpslmvpilkstvpasvvgsgtfqagfgfqlinntaehl 472 999************************************************** PP AA1.hmm 272 ..................................................... 271 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 473 treeavrlakeahhdssrdpnlrgkkkvpatfhgkgggyqensssrhaavdtg 525 ***************************************************** PP AA1.hmm 272 .........................................nvsf.vepstsl 282 nvs+ + p +++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 526 qeknrqhnpqrfggrkspagitrlagppptpagtigkyfvnNVSWtTFPYQPV 578 ****************************9999999999999999967889999 PP AA1.hmm 283 leay..sgv......detka..............klkln.......hp..lhg 304 l+++ gv hp lh 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 579 LHDLtpGGVgtingsR---VanvifptaewydlyL---VnvdaagsHPyhLHA 625 9985353335544431...1333344444444441...15556677******* PP AA1.hmm 305 hdfvvv...............nfdaedeakrdtvavpkggwvvirfvadnpgv 342 +d+++v ++++e++ +rdtv+vp+ + vv+r++ad pg 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 626 MDMHIVaygrgfptpeklskiKYSTENPLRRDTVVVPSASFVVVRLNADIPGA 678 ******766666655544433333888888*********************** PP AA1.hmm 343 wllhchieaHlsmG 356 w++hchi +H++ G 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 679 WIMHCHIGWHIAGG 692 ***********998 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 67.0 0.0 3.5e-22 3.5e-22 10 79 .. 56 124 .. 49 132 .. 0.90 2 ! 177.2 0.4 9.7e-56 9.7e-56 72 301 .. 159 410 .. 152 422 .. 0.86 3 ? -2.8 0.0 0.63 0.63 104 132 .. 672 700 .. 661 720 .. 0.74 Alignments for each domain: == domain 1 score: 67.0 bits; conditional E-value: 3.5e-22 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnl 62 + +tr+y+l+vte+++a DG+ ++++++ngq+Pgp+iea+ GD+le+tv n++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 56 KPTTRRYNLTVTETKAALDGFLRQVMAINGQIPGPLIEANEGDRLEITVINKM 108 5689************************************************* PP AA1_3.hmm 63 kknGtsiHwHGirqlnt 79 + + ++HwHG+ q ++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 109 NIE-LTMHWHGLYQASE 124 976.679*****99875 PP == domain 2 score: 177.2 bits; conditional E-value: 9.7e-56 AA1_3.hmm 72 HGirqlntneqDGvpgvtqCpiap.gesftYefrat.qyGtswYHsHyslQya 122 ++q+ tn++DGv+gvtqCpi+ g +tY+f ++ q+Gt wYHsH++ +a 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 159 NRVQQNGTNWEDGVTGVTQCPIPSnGGIYTYKFDTNgQFGTFWYHSHHQNLMA 211 56899*****************864789*****9865**************** PP AA1_3.hmm 123 dGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae...... 164 dG+ Gp++i+ P s ++d+d+ +l+++dw+h++ +++v+e+ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 212 DGINGPMIIHSPrdplkRSIDFDHDV-VLMMADWYHNTSSDIVQEMLseagyf 263 ***********955544467777775.6899***********99998777655 PP AA1_3.hmm 165 asggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrlin 211 + ++p a+ Ling +++++s + ++ ++ ++++++g++ r+rlin 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 264 GTPAAPGANCALINGVGQWNCSLAtttqqcNQVTSPPKFTVTAGQRIRFRLIN 316 5566689999***********9886666655556666799************* PP AA1_3.hmm 212 tsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe. 262 ++v+++f fs+d+H l++ +aD i p + +++++ gqRy viv++++e 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 317 AGVHAMFFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTKEEd 369 **************************659999*******************99 PP AA1_3.hmm 263 .eenywlraelaeaCskl..naeekeikailrYeeassaept 301 ++n+++ra+++++C ++ n+ ++++ +ilr ++++ p+ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 370 vDRNFYMRATMNSDCWAWvpNDIQDTALGILRLAHDDA-RPE 410 99*************99855677888899999877765.444 PP == domain 3 score: -2.8 bits; conditional E-value: 0.63 AA1_3.hmm 104 ratqyGtswYHsHyslQyadGvlGplvin 132 +a+ G H H+ a G +G +v++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 672 NADIPGAWIMHCHIGWHIAGGYAGVVVVQ 700 55555777788888888888888888876 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 38.3 0.1 1.8e-13 1.8e-13 2 49 .. 78 124 .. 77 131 .. 0.93 2 ! 179.0 0.1 2.8e-56 2.8e-56 44 267 .. 161 411 .. 153 450 .. 0.90 3 ? 1.0 0.0 0.038 0.038 151 194 .. 589 632 .. 563 647 .. 0.84 4 ? -0.7 0.0 0.13 0.13 77 105 .. 674 702 .. 660 710 .. 0.84 Alignments for each domain: == domain 1 score: 38.3 bits; conditional E-value: 1.8e-13 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngt 49 r+v+++Ngq P p ie+n+gdr+e+++ N++ + + ++H+HGl+q ++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 78 RQVMAINGQIPGPLIEANEGDRLEITVINKM-NIELTMHWHGLYQASE 124 89*****************************.88999*******9865 PP == domain 2 score: 179.0 bits; conditional E-value: 2.8e-56 AA1_2.hmm 44 lfqngtnamDGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDG 95 + qngtn+ DG+++vtqCpip g +tY+f+++ q Gt+WyHsH+++ DG 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 161 VQQNGTNWEDGVTGVTQCPIPSnGGIYTYKFDTNGQFGTFWYHSHHQNLMADG 213 569*****************9626679************************** PP AA1_2.hmm 96 lrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflskynptg.. 142 + gp+ii+ +++p ++d++++l+++dwYh++s+++v+e+ls++ g 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 214 INGPMIIHSPRDPLkrsiDFDHDVVLMMADWYHNTSSDIVQEMLSEAGYFGtp 266 *********998887788****************************6665500 PP AA1_2.hmm 143 aepipdsllv..................netenatlevepgktYllriinvga 177 a p + +l+ + t+ +++v++g++ ++r+in g+ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 267 AAPGANCALIngvgqwncslatttqqcnQVTSPPKFTVTAGQRIRFRLINAGV 319 5666666777**************99977788899****************** PP AA1_2.hmm 178 fasqylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsk 228 a++++++++h ++i e+D++ + ps ++ + +QRysv+v++k++ ++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 320 HAMFFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTKEEdVDR 372 ********************98853889*******************97589* PP AA1_2.hmm 229 nyalvakmdetmldvvpddlqlnvtstlvydksaalaea 267 n+ + a+m+++ + vp+d+q + l+ +++ a +e+ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 373 NFYMRATMNSDCWAWVPNDIQDTALGILRLAHDDARPEN 411 **********************99999998888777765 PP == domain 3 score: 1.0 bits; conditional E-value: 0.038 AA1_2.hmm 151 lvnetenatlevepgktYllriinvgafasqylvledhemtive 194 +n ++ a++ + + + Y l ++nv a s+ +l +m+iv 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 589 TINGSRVANVIFPTAEWYDLYLVNVDAAGSHPYHLHAMDMHIVA 632 56777888888999999***********************9996 PP == domain 4 score: -0.7 bits; conditional E-value: 0.13 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedk 105 + G++ +H+H + + G g+++++++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 674 DIPGAWIMHCHIGWHIAGGYAGVVVVQPD 702 4579999*******************987 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 38.5 0.0 1.5e-13 1.5e-13 3 59 .. 73 124 .. 71 136 .. 0.89 2 ! 176.7 0.5 1.3e-55 1.3e-55 50 267 .. 157 401 .. 150 420 .. 0.83 3 ? -3.5 0.0 0.95 0.95 75 113 .. 662 700 .. 660 702 .. 0.79 Alignments for each domain: == domain 1 score: 38.5 bits; conditional E-value: 1.5e-13 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglf 55 DGf r+++ +ng++pgpli +++gd+++i+v+n++ + + ++hwhgl+ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 73 LDGFLRQVMAINGQIPGPLIEANEGDRLEITVINKM-----NIELTMHWHGLY 120 6********************************975.....56789******* PP AA1_1.hmm 56 qkgt 59 q+++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 121 QASE 124 9865 PP == domain 2 score: 176.7 bits; conditional E-value: 1.3e-55 AA1_1.hmm 50 hwhglfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstq 101 ++ + q+gtnw+dg++ vtqCPi + g ++y+f++++q GtfwYHsh+++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 157 AFNRVQQNGTNWEDGVTGVTQCPIPSnGGIYTYKFDTNGQFGTFWYHSHHQNL 209 677889******************873578*********************** PP AA1_1.hmm 102 ycdglrGalvvydpedplkslydvddestvitladwyhtaakell........ 146 + dg+ G+++++ p+dplk+ d+d++ v+++adwyh++++++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 210 MADGINGPMIIHSPRDPLKRSIDFDHD-VVLMMADWYHNTSSDIVqemlseag 261 ************************986.799**********999889999999 PP AA1_1.hmm 147 ....klvavadstlinGlgrya...ggpeaela......vvnvekgkrYrfrl 186 +++ a+ +linG+g+++ ++++++ +v++g+r rfrl 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 262 yfgtPAAPGANCALINGVGQWNcslATTTQQCNqvtsppKFTVTAGQRIRFRL 314 9977777999**********9954433333333111111568*********** PP AA1_1.hmm 187 vsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanq 238 ++ ++ f fs+d+h l++ ead++ + p + +i + gqrysv++++++ 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 315 INAGVHAMFFFSVDEHMLNITEADSTGIyGPSDFRHIWLHNGQRYSVIVQTKE 367 *************************976379******************9976 PP AA1_1.hmm 239 e.vd.nYwiranpnlgk...ntgfegginsailr 267 e vd n+++ra++n+ + +++ ilr 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 368 EdVDrNFYMRATMNSDCwawVPNDIQDTALGILR 401 52445********998744333333344445555 PP == domain 3 score: -3.5 bits; conditional E-value: 0.95 AA1_1.hmm 75 pgnsflydfkvpdqaGtfwYHshlstqycdglrGalvvy 113 p++sf+ +d G++ H h+ g G +vv 14295|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 662 PSASFVVVRLNADIPGAWIMHCHIGWHIAGGYAGVVVVQ 700 5666666555678889999******99999999999985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (732 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 116.48 // Query: 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 [L=628] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.3e-105 341.1 0.2 3e-105 340.7 0.2 1.1 1 AA1.hmm 8.5e-80 256.3 0.5 5.5e-78 250.3 0.3 2.8 3 AA1_3.hmm 9.1e-76 243.1 0.0 3.4e-71 228.0 0.0 3.1 3 AA1_2.hmm 1.6e-75 242.1 0.0 7e-74 236.7 0.0 2.7 3 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 340.7 0.2 3e-105 3e-105 7 358 .] 68 602 .. 57 602 .. 0.84 Alignments for each domain: == domain 1 score: 340.7 bits; conditional E-value: 3e-105 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwa 59 + r+v+++N+q+PgP+ieanegD++++tV+Nkl + ++t+HwhG+ q+gtnw+ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 68 FWREVLAINNQMPGPLIEANEGDRLEITVVNKL-NSPLTMHWHGMYQNGTNWE 119 789*****************************9.78***************** PP AA1.hmm 60 DGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdp 112 DG++gvtqcpi++g+++tY+f++++q GtywyH+H+ + +++G+ G+lii++p 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 120 DGPSGVTQCPIPAGETYTYKFSLDGQFGTYWYHAHYPTLRVEGVDGPLIIHSP 172 ***************************************************99 PP AA1.hmm 113 ks..kekydvddeelvillsdwyhktaeell.......ken.atgaepapdsl 155 ++ k+k d+d +e+v++l+dwyh+ a++++ ++p p+s+ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 173 RDplKRKIDFD-QEMVLMLTDWYHTPADQIVpqilsstG-YrGYPTAPSPNSA 223 66444499999.889****************99886431.234455666**** PP AA1.hmm 156 linGkgrlync......s.....sklevlkvepgktyrlrlinaalnaeltfs 197 linG g+ +c + +++v +g + r rlina+++a+++fs 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 224 LINGVGEW-DCrfatttQrcrqiG-PPEFTVVAGSRVRYRLINAGAHAMFFFS 274 ******96.664655441443332.349************************* PP AA1.hmm 198 idnHkltvieaDgvyvkpyevdslqiapGqrydvllk..anqsagnywirasl 248 dnH+l+v eaD+++v+ +++ ++ + Gqry+v+++ n++ +++++ra++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 275 ADNHTLNVTEADATPVHGPNIHRVVFHNGQRYSVIVNipMNEAGTSFYLRAKM 327 *************************************87777778******99 PP AA1.hmm 249 ds...a....afdnttalailrYkgassas....................... 271 d + + ta+ai+r + s+++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 328 DPdcwPwvtnD-LQDTAYAIIRVVAPSTEKnqvqskqrptsqdwaertnnqcm 379 88666155534.57899*****98744433566677888999999999999** PP AA1.hmm 272 ..................................................... 271 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 380 dldpnslvpiipvrvpttvlgtgsfmnalgfkanslpsaspnpssgmigaenr 432 ***************************************************** PP AA1.hmm 272 ..........................................nvsf.vepsts 281 n++ +p+++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 433 plnlpahrvlpplgtnttspgqtnntqvpapppgtgfrffinNITAvLKPQQP 485 **999999999999999999999999999999999999999966553677888 PP AA1.hmm 282 llea.ysgv....detka..................klklnhp..lhghdfvv 309 +l++ ++g ++t+ ++ +nhp lhg d+++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 486 ILHDlVRGGsgfvNSTNIasivfpklgyydlylvntDAATNHPfhLHGPDMHI 538 88884433344463333355566655666666666666777************ PP AA1.hmm 310 v...........nfd.....aedeakrdtvavpkggwvvirfvadnpgvwllh 346 v +e++ +rdt +++ g +v r+++d pgvw+lh 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 539 VaqgnglptpenL-RnltyrTENPLRRDTLMIQGGTFTVARINTDLPGVWFLH 590 *877766665540.145465888888*************************** PP AA1.hmm 347 chieaHlsmGla 358 ch+++Hl++Gla 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 591 CHMDWHLESGLA 602 **********96 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 250.3 0.3 5.5e-78 5.5e-78 10 299 .. 48 356 .. 41 378 .. 0.85 2 ? 0.7 0.0 0.053 0.053 193 232 .. 502 541 .. 473 543 .. 0.83 3 ? 1.2 0.0 0.038 0.038 107 140 .. 583 616 .. 568 624 .. 0.79 Alignments for each domain: == domain 1 score: 250.3 bits; conditional E-value: 5.5e-78 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnl 62 + +tr+ytl v+++t++pDG+ +e+l++n+q+Pgp+iea+ GD+le+tv+n+l 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 48 KPQTRKYTLVVHNTTASPDGFWREVLAINNQMPGPLIEANEGDRLEITVVNKL 100 6689************************************************* PP AA1_3.hmm 63 kknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGtswYH 114 + ++HwHG+ q+ tn++DG +gvtqCpi+ ge++tY+f+ + q+Gt wYH 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 101 N-SPLTMHWHGMYQNGTNWEDGPSGVTQCPIPAGETYTYKFSLDgQFGTYWYH 152 8.5688***********************************98669******* PP AA1_3.hmm 115 sHyslQyadGvlGplvinGP...asanydvdl.gpllltdwshesafelveea 163 +Hy + +Gv Gpl+i+ P + + d d +l+ltdw+h+ a+++v + 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 153 AHYPTLRVEGVDGPLIIHSPrdpLKRKIDFDQeMVLMLTDWYHTPADQIVPQI 205 ******************99443356777776246789************999 PP AA1_3.hmm 164 e......asggppvadniLingknkvkkskkeeegeyse.....vklekgkky 205 ++p+ ++ Ling ++++++ ++++++ + +++ +g + 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 206 LsstgyrGYPTAPSPNSALINGVGEWDCRFATTTQRCRQigppeFTVVAGSRV 258 966554333455999*************998555554444444499******* PP AA1_3.hmm 206 rlrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydvive 258 r rlin++++++f fs d+H+l+v +aD p++ + + ++ + gqRy viv+ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 259 RYRLINAGAHAMFFFSADNHTLNVTEADATPVHGPNIHRVVFHNGQRYSVIVN 311 ***************************************************99 PP AA1_3.hmm 259 anqe..eenywlraelaeaCskl..naeekeikailrYeeassae 299 + ++++lra+++ +C + n+ ++++ ai+r + s+++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 312 IPMNeaGTSFYLRAKMDPDCWPWvtNDLQDTAYAIIRVVAPSTEK 356 75554599************9863345667777888765555433 PP == domain 2 score: 0.7 bits; conditional E-value: 0.053 AA1_3.hmm 193 eysevklekgkkyrlrlintsvdstfkfsidgHkltviaa 232 +++++ + k y l l+nt + + f++ g +++++a+ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 502 NIASIVFPKLGYYDLYLVNTDAATNHPFHLHGPDMHIVAQ 541 55666667777899**********************9985 PP == domain 3 score: 1.2 bits; conditional E-value: 0.038 AA1_3.hmm 107 qyGtswYHsHyslQyadGvlGplvinGPasanyd 140 G + H H G++G lv++ + ++++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 583 LPGVWFLHCHMDWHLESGLAGVLVVQPEKVKSFE 616 5588889*****************9977777776 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 228.0 0.0 3.4e-71 3.4e-71 2 279 .. 70 370 .. 69 421 .. 0.88 2 ! 4.6 0.0 0.0031 0.0031 150 194 .. 496 540 .. 469 555 .. 0.83 3 ! 6.8 0.0 0.00065 0.00065 76 106 .. 581 611 .. 567 621 .. 0.80 Alignments for each domain: == domain 1 score: 228.0 bits; conditional E-value: 3.4e-71 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 r+v+++N+q P p ie+n+gdr+e+++ N+l +++ ++H+HG++qngtn+ DG 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 70 REVLAINNQMPGPLIEANEGDRLEITVVNKL-NSPLTMHWHGMYQNGTNWEDG 121 89*****************************.89******************* PP AA1_2.hmm 55 asmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkee 107 +s+vtqCpip get+tY+f+++ q GtYWyH+H+ + + G+ gplii+ +++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 122 PSGVTQCPIPAGETYTYKFSLDGQFGTYWYHAHYPTLRVEGVDGPLIIHSPRD 174 **************************************************998 PP AA1_2.hmm 108 py....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.. 152 p ++d+e++l+l+dwYh+ +++v ++ls y+ + p p+s+l+ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 175 PLkrkiDFDQEMVLMLTDWYHTPADQIVPQILSStgYRGYPTAPSPNSALIng 227 877777************************9999556666789********** PP AA1_2.hmm 153 ...............netenatlevepgktYllriinvgafasqylvledhem 190 + +++v +g + + r+in ga a+++++ ++h++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 228 vgewdcrfatttqrcRQIGPPEFTVVAGSRVRYRLINAGAHAMFFFSADNHTL 280 *********9998777777789******************************* PP AA1_2.hmm 191 tivevDGvdvepsevdslyiavaQRysvLvkak.ndtsknyalvakmdetmld 242 ++ e+D++ v+ +++ + +QRysv+v+ n++ +++ l akmd + + 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 281 NVTEADATPVHGPNIHRVVFHNGQRYSVIVNIPmNEAGTSFYLRAKMDPDCWP 333 ******************************98615688*************** PP AA1_2.hmm 243 vvpddlqlnvtstlvydksaalaeastvdelealdDf 279 v +dlq + + ++ + +++++ + ++ + +D+ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 334 WVTNDLQDTAYAIIRVVAPSTEKNQVQSKQRPTSQDW 370 ******9999888877665555555544444444444 PP == domain 2 score: 4.6 bits; conditional E-value: 0.0031 AA1_2.hmm 150 llvnetenatlevepgktYllriinvgafasqylvledhemtive 194 vn+t+ a++ + + Y l ++n+ a +++ ++l + +m+iv 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 496 GFVNSTNIASIVFPKLGYYDLYLVNTDAATNHPFHLHGPDMHIVA 540 45699999999999999**************************96 PP == domain 3 score: 6.8 bits; conditional E-value: 0.00065 AA1_2.hmm 76 eeqvGtYWyHsHskgqYeDGlrgpliiedke 106 ++ G + +H+H++ + e Gl g+l++++++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 581 TDLPGVWFLHCHMDWHLESGLAGVLVVQPEK 611 367899**********************987 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 236.7 0.0 7e-74 7e-74 2 280 .. 64 360 .. 63 396 .. 0.86 2 ? -0.2 0.0 0.097 0.097 175 209 .. 507 541 .. 489 555 .. 0.79 3 ? 1.3 0.0 0.034 0.034 85 113 .. 580 608 .. 568 614 .. 0.82 Alignments for each domain: == domain 1 score: 236.7 bits; conditional E-value: 7e-74 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhgl 54 spDGf r++ +n+++pgpli +++gd+++i+vvn+L+ + ++hwhg+ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 64 SPDGFWREVLAINNQMPGPLIEANEGDRLEITVVNKLNSP-----LTMHWHGM 111 7************************************876.....589***** PP AA1_1.hmm 55 fqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglr 107 +q+gtnw+dgp+ vtqCPi +g++++y+f++++q Gt+wYH+h+ t ++g+ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 112 YQNGTNWEDGPSGVTQCPIPAGETYTYKFSLDGQFGTYWYHAHYPTLRVEGVD 164 ***************************************************** PP AA1_1.hmm 108 Galvvydpedplkslydvddestvitladwyhtaakell............kl 148 G+l+++ p+dplk+ d+d+e v++l+dwyht+a ++ + 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 165 GPLIIHSPRDPLKRKIDFDQE-MVLMLTDWYHTPADQIVpqilsstgyrgyPT 216 ******************987.699************9999999999998778 PP AA1_1.hmm 149 vavadstlinGlgrya...ggpeaelav.....vnvekgkrYrfrlvsiscdp 193 ++ ++s+linG+g + +++++ +v +g r r rl++ +++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 217 APSPNSALINGVGEWDcrfATTTQRCRQigppeFTVVAGSRVRYRLINAGAHA 269 899**********7763333333333331222279****************** PP AA1_1.hmm 194 nftfsidghnltvieadgvntkpltvdsiqifagqrysvvle..anqevdnYw 244 f fs d+h+l+v ead++ ++ +++++ gqrysv+++ n++ ++ 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 270 MFFFSADNHTLNVTEADATPVHGPNIHRVVFHNGQRYSVIVNipMNEAGTSFY 322 ****************************************9944589999*** PP AA1_1.hmm 245 iranpnlgk...ntgfegginsailrykgapeaePttkq 280 +ra+++ t+ +++ ai+r + p++e ++ q 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 323 LRAKMDPDCwpwVTNDLQDTAYAIIRVVA-PSTEKNQVQ 360 ****9988777767777788899999864.443333333 PP == domain 2 score: -0.2 bits; conditional E-value: 0.097 AA1_1.hmm 175 nvekgkrYrfrlvsiscdpnftfsidghnltviea 209 k Y + lv++ + +n+ f + g +++++ + 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 507 VFPKLGYYDLYLVNTDAATNHPFHLHGPDMHIVAQ 541 5555567999********************99975 PP == domain 3 score: 1.3 bits; conditional E-value: 0.034 AA1_1.hmm 85 vpdqaGtfwYHshlstqycdglrGalvvy 113 +d G ++ H h+ gl G lvv 660182|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 580 NTDLPGVWFLHCHMDWHLESGLAGVLVVQ 608 46778999*******************96 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (628 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 103.15 // Query: 499699|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 [L=380] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.9e-17 50.9 0.0 4.6e-17 50.6 0.0 1.1 1 AA1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 50.6 0.0 1.2e-17 4.6e-17 271 357 .. 171 341 .. 91 342 .. 0.67 Alignments for each domain: == domain 1 score: 50.6 bits; conditional E-value: 1.2e-17 AA1.hmm 271 s...........................................nvsf.veps 279 n+s+ + p 499699|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 171 YnkrqvkvgqhnlpsgnrtnqlgitrtggppptpagtigkfflnNISWtTYPY 223 03333334555555555666666666666666677777777777777755677 PP AA1.hmm 280 tslleay..sgv...detka....klkln.................hp..lhg 304 +++l+++ gv ++++ hp lh 499699|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 224 QPILHDLtpGGVgavNDSNVanviY---PtaewydlylanvdpagsHPyhLHA 273 7777774342225442222233330...144555556667778889******* PP AA1.hmm 305 hdfvvv...............nfdaedeakrdtvavpkggwvvirfvadnpgv 342 d+++v +++++++ +rdt++vp+ + +v+r++ad pg 499699|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 274 LDMHIVaegkglptpqnlanaTYNTDNPLRRDTIVVPPASFIVVRLQADVPGA 326 ******988888777666544444888888*********************** PP AA1.hmm 343 wllhchieaHlsmGl 357 w++hchi +H++ G 499699|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 327 WIVHCHIGWHIAAGF 341 ************997 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (380 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 3 (0.75); expected 0.1 (0.02) Passed bias filter: 3 (0.75); expected 0.1 (0.02) Passed Vit filter: 1 (0.25); expected 0.0 (0.001) Passed Fwd filter: 1 (0.25); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 241.60 // Query: 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 [L=664] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9.7e-99 319.3 0.0 1.4e-98 318.8 0.0 1.2 1 AA1.hmm 3.3e-76 244.5 0.2 6e-76 243.6 0.2 1.3 1 AA1_3.hmm 6.1e-73 233.8 0.8 7.7e-72 230.1 0.0 2.2 2 AA1_2.hmm 5.5e-70 223.9 0.0 1e-69 223.0 0.0 1.4 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 318.8 0.0 1.4e-98 1.4e-98 7 357 .. 62 623 .. 52 624 .. 0.78 Alignments for each domain: == domain 1 score: 318.8 bits; conditional E-value: 1.4e-98 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtn 57 + r v+++N+q+PgP+ieanegD++ +tV N+l + +tiHwhGl q+gtn 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 62 FLRGVLAINNQIPGPLIEANEGDHLDITVINNL-DSALTIHWHGLYQNGTN 111 567899***************************.689************** PP AA1.hmm 58 waDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGali 108 +DGv g+tqcpi++g +tY+f++++q Gt+wyH+H++ adGl+G+li 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 112 SEDGVTGITQCPIPSGGRYTYKFQLNGQFGTFWYHAHHQNLLADGLYGPLI 162 *************************************************** PP AA1.hmm 109 irdpks..kekydvddeelvillsdwyhktaeell......ken.atgaep 150 i++p++ k+ d+d e++v++++dwyh+t++e++ ++ t a+p 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 163 IHSPRDplKRGIDFD-EDVVLMIADWYHNTSSEIVkhmlsePGYfGTPAAP 212 **9965444489988.899****************8888653335777888 PP AA1.hmm 151 apdsllinGkgrlync.......s.....sklevlkvepgktyrlrlinaa 189 p+s+++nG g+ +c + ++l v++v gk+ r+r+ina+ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 213 SPNSVIMNGIGDW-DCnrfatihQrcektNSLPVFNVVGGKRIRFRIINAG 262 8**********97.5645555541454556688****************** PP AA1.hmm 190 lnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa 239 ++a+++fs d+H+l+v eaD ++v p +v+ ++ + Gqry+v++++++++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 263 SHAMIYFSGDEHSLNVTEADSTPVYgPSNVHRIKFHNGQRYSVIINTQEKE 313 ***********************9659*******************88888 PP AA1.hmm 240 ..gnywiraslds...a....afdnttalailrYkgassas.......... 271 +++++r ++d+ a + ++t+lai+r + ++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 314 vgSSFYLRGTMDTdcfAwvagD-IQKTGLAIVRVIKPDEDMkslkeftipn 363 766******9999766255544.58999*****977333224667778888 PP AA1.hmm 272 ................................................... 271 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 364 tkdwsdekagscvdldpellnpiipidvpetvagsgtlanafgfqvistgv 414 888888999999999999999999999999999999999999999999999 PP AA1.hmm 272 ................................................... 271 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 415 siprdqasklsseprsissssssssspssysspisrikqrqlkldstrkvl 465 999999988888888776665555543333333333333333332222222 PP AA1.hmm 272 .nvsfvepstslleaysgvdetkaklkln...................... 299 + 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 466 pL--------------------------Gtatssapeknqdgppptpagar 490 20..........................13333333333344444444444 PP AA1.hmm 300 ................................................... 299 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 491 gvffvndanwktypyhpvlhdmlpggpgsldnaeianvvypnaewydlylv 541 444444445555555566666666666666666777777778888888888 PP AA1.hmm 300 .......hp..lhghdfvvv..........nfd......aedeakrdtvav 325 h lh +d+++v n ++++ +rdt+++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 542 nldpaisHSyhLHAMDMHLVafgkgkptpeN-LsklkyrTKNPLRRDTIVI 591 99898988889*********76666555441.0444455777777****** PP AA1.hmm 326 pkggwvvirfvadnpgvwllhchieaHlsmGl 357 + +++v+r+ ad pgvw++hchi +Hl+ G 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 592 DAASYAVVRVLADIPGVWIMHCHIGWHLAGGF 623 ****************************9996 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 243.6 0.2 6e-76 6e-76 10 285 .. 42 337 .. 36 363 .. 0.90 Alignments for each domain: == domain 1 score: 243.6 bits; conditional E-value: 6e-76 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvkn 60 +vtr++++ t++t++pDG+ + +l++n+q+Pgp+iea+ GD+l +tv n 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 42 GAVTRKFEFVCTNTTASPDGFLRGVLAINNQIPGPLIEANEGDHLDITVIN 92 579************************************************ PP AA1_3.hmm 61 nlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGt 110 nl+ + +iHwHG+ q+ tn++DGv+g+tqCpi+ g +tY+f+ + q+Gt 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 93 NLD-SALTIHWHGLYQNGTNSEDGVTGITQCPIPSGGRYTYKFQLNgQFGT 142 **8.6899************************************865**** PP AA1_3.hmm 111 swYHsHyslQyadGvlGplvinGPas.....anydvdlgpllltdwshesa 156 wYH+H++ adG++Gpl+i+ P ++d+d+ +l+++dw+h++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 143 FWYHAHHQNLLADGLYGPLIIHSPRDplkrgIDFDEDV-VLMIADWYHNTS 192 ***********************964222226788885.7899******** PP AA1_3.hmm 157 felveeae......asggppvadniLingknkvkkskk.......eeegey 194 +e+v+++ + ++p+ +++++ng + +++++ e++++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 193 SEIVKHMLsepgyfGTPAAPSPNSVIMNGIGDWDCNRFatihqrcEKTNSL 243 *****99977876666677999*************7768999888888888 PP AA1_3.hmm 195 sevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttds 244 +++ gk+ r+r+in+++++++ fs d+H+l+v +aD p+ p +++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 244 PVFNVVGGKRIRFRIINAGSHAMIYFSGDEHSLNVTEADSTPVYgPSNVHR 294 99*****************************************65999*** PP AA1_3.hmm 245 lligigqRydviveanqe..eenywlraelaeaCsklnaeeke 285 + + gqRy vi++++++ ++++lr +++++C ++ a + + 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 295 IKFHNGQRYSVIINTQEKevGSSFYLRGTMDTDCFAWVAGDIQ 337 ****************999999************987544333 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 230.1 0.0 7.7e-72 7.7e-72 2 257 .. 64 345 .. 63 376 .. 0.91 2 ? 1.8 0.1 0.022 0.022 77 106 .. 604 633 .. 588 643 .. 0.84 Alignments for each domain: == domain 1 score: 230.1 bits; conditional E-value: 7.7e-72 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnam 52 r v+++N+q P p ie+n+gd++ +++ N+l d++ ++H+HGl+qngtn+ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 64 RGVLAINNQIPGPLIEANEGDHLDITVINNL-DSALTIHWHGLYQNGTNSE 113 6799***************************.9999*************** PP AA1_2.hmm 53 DGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliie 103 DG++++tqCpip g ++tY+f+++ q Gt+WyH+H+++ DGl gplii+ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 114 DGVTGITQCPIPSGGRYTYKFQLNGQFGTFWYHAHHQNLLADGLYGPLIIH 164 *************************************************** PP AA1_2.hmm 104 dkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipd 148 +++p ++de+++l+++dwYh++s+e+vk++ls+ y t a p p+ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 165 SPRDPLkrgiDFDEDVVLMIADWYHNTSSEIVKHMLSEpgYFGTPAAPSPN 215 ***9988888***************************98888999****** PP AA1_2.hmm 149 sllv...................netenatlevepgktYllriinvgafas 180 s+++ ++++ ++v gk+ ++riin g a+ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 216 SVIMngigdwdcnrfatihqrceKTNSLPVFNVVGGKRIRFRIINAGSHAM 266 ********************98655666689******************** PP AA1_2.hmm 181 qylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tskn 229 y++ ++h++++ e+D++ v ps+v+ ++ +QRysv+++++++ ++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 267 IYFSGDEHSLNVTEADSTPVYgPSNVHRIKFHNGQRYSVIINTQEKeVGSS 317 ******************9853899*******************984669* PP AA1_2.hmm 230 yalvakmdetmldvvpddlqlnvtstlv 257 + l +md++ + v+ d+q + ++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 318 FYLRGTMDTDCFAWVAGDIQKTGLAIVR 345 *************999998877666554 PP == domain 2 score: 1.8 bits; conditional E-value: 0.022 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke 106 + G + +H+H + + G+ g++i+++++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 604 DIPGVWIMHCHIGWHLAGGFAGVVIVQPNK 633 45688889*******************987 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 223.0 0.0 1e-69 1e-69 2 253 .. 58 328 .. 57 357 .. 0.89 Alignments for each domain: == domain 1 score: 223.0 bits; conditional E-value: 1e-69 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwh 52 spDGf r + +n+++pgpli +++gd+++i+v+n+L+ + +ihwh 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 58 SPDGFLRGVLAINNQIPGPLIEANEGDHLDITVINNLDS-----ALTIHWH 103 7***********************************975.....569**** PP AA1_1.hmm 53 glfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqyc 103 gl+q+gtn +dg++ +tqCPi +g ++y+f++++q GtfwYH+h+++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 104 GLYQNGTNSEDGVTGITQCPIPSGGRYTYKFQLNGQFGTFWYHAHHQNLLA 154 *************************************************** PP AA1_1.hmm 104 dglrGalvvydpedplkslydvddestvitladwyhtaakell........ 146 dgl G+l+++ p+dplk+ d+d+ + v+++adwyh++++e+ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 155 DGLYGPLIIHSPRDPLKRGIDFDE-DVVLMIADWYHNTSSEIVkhmlsepg 204 **********************85.6899**********999989999999 PP AA1_1.hmm 147 ....klvavadstlinGlgryagg..........peaelavvnvekgkrYr 183 +++ ++s ++nG+g + + ++++l v nv gkr r 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 205 yfgtPAAPSPNSVIMNGIGDWDCNrfatihqrceKTNSLPVFNVVGGKRIR 255 998777799**********8875556666777768889************* PP AA1_1.hmm 184 frlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvv 233 fr+++ +++ fs d+h+l+v ead++ + p +v++i+ gqrysv+ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 256 FRIINAGSHAMIYFSGDEHSLNVTEADSTPVyGPSNVHRIKFHNGQRYSVI 306 ****************************987369***************** PP AA1_1.hmm 234 leanqe.vd.nYwiranpnlgk 253 ++++++ v+ +++r ++++ 124650|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 307 INTQEKeVGsSFYLRGTMDTDC 328 *997541433788888877765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (664 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 107.40 // Query: 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 [L=667] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-86 278.4 0.0 5.7e-86 277.3 0.0 1.5 1 AA1.hmm 8.6e-65 207.0 0.2 1.1e-63 203.3 0.1 2.5 3 AA1_3.hmm 2.5e-59 189.0 0.0 1.3e-55 176.8 0.0 3.4 3 AA1_2.hmm 2.4e-57 182.4 0.0 1.2e-56 180.1 0.0 2.1 3 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 277.3 0.0 5.7e-86 5.7e-86 7 357 .. 71 627 .. 60 628 .. 0.80 Alignments for each domain: == domain 1 score: 277.3 bits; conditional E-value: 5.7e-86 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwa 59 + r+v+++N q+PgP+iean gD++++tV N+l + +++ HwhGl+q+gtnw+ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 71 FLRRVLVINKQMPGPLIEANDGDNLEITVINQL-NSPLSFHWHGLHQNGTNWE 122 6789****************************9.78***************** PP AA1.hmm 60 DGvagvtqcpiap.gksftYeftvteqaGtyw......yH.........sHvs 96 DG vtqcpi++ g +tY+f++ +q+Gt+ yH +H++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 123 DGITAVTQCPIPAsGGRYTYKFQLRKQYGTFCkdqlnsYHtlkdclyqtAHHQ 175 ***********989****************95555555887777777778*** PP AA1.hmm 97 lqyadGlrGaliirdpkske....kydvddeelvillsdwyhktaeell.... 141 +adG+ G+li+++ + + +d+d +e+v++l+dwyh+ ++e++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 176 NLKADGILGPLIVHSTE--DplkrGVDFD-QEIVLMLTDWYHTMSSEIVrqlr 225 **************642..2344589988.999****************9998 PP AA1.hmm 142 ...ken.atgaepapdsllinGkgrlync.....s.....sklevlkvepgkt 180 + ++p p+s+l+nG g++ nc s ++ +++v +g + 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 226 spkG-YaGSASAPSPNSALMNGVGEY-NCrfatkSercktTSPPEFSVAAGSK 276 7532.236677788**********96.665666514554555669******** PP AA1.hmm 181 yrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvl 232 r+r+i+ ++ a+++fs d+H l+v eaD+++v+ p+ ++ ++++ Gqry+++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 277 VRFRIIGGGSLAMFYFSADQHVLNVTEADATPVHgPTGIHRVKLHNGQRYSAI 329 ********************************986899*************** PP AA1.hmm 233 lk..anqsagnywiraslds...a....afdnttalailrYkg.......ass 269 ++ ++++ ++++ir +++s + + + ta++i+r + + s 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 330 VTigEKEAGSSFYIRGTMESdcwSwvnnD-VQLTAYGIVRVSPingytnpQ-S 380 **74444347******8888666244432.456667777764465565442.2 PP AA1.hmm 270 as................................................... 271 s 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 381 -Sqkrpvsrdwkdepdgscvdlnpnelspiipvsppkkvagtgqftsafgfqs 432 .24688999999999999999999999************************** PP AA1.hmm 272 ..................................................... 271 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 433 ifnnsqiapdapppppgtvipglkkrqvqitaadgtaprgnaplpapitknag 485 **999999999999999999999999999999999999999999999999999 PP AA1.hmm 272 ..........................................nvsfvepstsl 282 + 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 486 pppipkngvarwfvnnvtweaftyqpilfdltpggvgrvngtR---------- 528 9999999988888884444444444444444444444333330.......... PP AA1.hmm 283 leaysgvdetka..................klklnhp..lhghdfvvv..... 310 ++ lnhp lhg+d+++v 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 529 -----------VpsvtfptaewydlylvntDAGLNHPfhLHGMDMHLVafgkg 570 ...........122222323333333333356667*************66666 PP AA1.hmm 311 ..........nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHl 353 ++ ++++ +rdtv+v+ g+ vv r++ad +gvw++hch+ Hl 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 571 lptpdvlsklEYRTDNPLRRDTVMVEGGSFVVARVRADLVGVWMMHCHMGGHL 623 6655554433333888888********************************** PP AA1.hmm 354 smGl 357 s G 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 624 SGGF 627 9995 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 203.3 0.1 1.1e-63 1.1e-63 7 304 .. 48 382 .. 43 389 .. 0.84 2 ? -1.3 0.0 0.22 0.22 194 231 .. 529 566 .. 512 567 .. 0.80 3 ? -0.6 0.0 0.13 0.13 100 132 .. 602 634 .. 594 640 .. 0.84 Alignments for each domain: == domain 1 score: 203.3 bits; conditional E-value: 1.1e-63 AA1_3.hmm 7 vpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvk 59 ++ +gvtr++ lev + t++pDG+ +++l++n+q+Pgp+iea+ GD+le+tv 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 48 INAKGVTRNFVLEVANITASPDGFLRRVLVINKQMPGPLIEANDGDNLEITVI 100 5679************************************************* PP AA1_3.hmm 60 nnlkknGtsiHwHGirqlntneqDGvpgvtqCpi.apgesftYefra.tqyGt 110 n+l+ s+HwHG++q+ tn++DG+++vtqCpi a g +tY+f+ +qyGt 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 101 NQLN-SPLSFHWHGLHQNGTNWEDGITAVTQCPIpASGGRYTYKFQLrKQYGT 152 ***8.689**************************44699******97479**9 PP AA1_3.hmm 111 ......swYH.........sHyslQyadGvlGplvinG...Pasanydvdl.g 144 YH +H++ adG+lGpl+++ P + d d 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 153 fckdqlNSYHtlkdclyqtAHHQNLKADGILGPLIVHStedPLKRGVDFDQeI 205 55444446995555444445999999**********97333667777777624 PP AA1_3.hmm 145 pllltdwshesafelveeae......asggppvadniLingknkvkkskk... 188 +l+ltdw+h+ +e+v++ + s+++p+ ++ L+ng ++++++ + 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 206 VLMLTDWYHTMSSEIVRQLRspkgyaGSASAPSPNSALMNGVGEYNCRFAtks 258 6799************99987777665667799**************888666 PP AA1_3.hmm 189 ..eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie. 238 ++++ e+++ +g k r+r+i ++ ++f fs d+H l+v +aD p++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 259 erCKTTSPPEFSVAAGSKVRFRIIGGGSLAMFYFSADQHVLNVTEADATPVHg 311 555566667799***************************************86 PP AA1_3.hmm 239 pyttdslligigqRydviveanqe..eenywlraelaeaCskl..naeekeik 287 p + + ++ gqRy iv+ ++ +++++r +++++C ++ n+ + ++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 312 PTGIHRVKLHNGQRYSAIVTIGEKeaGSSFYIRGTMESDCWSWvnNDVQLTAY 364 8889**************9987776799************9974335556677 PP AA1_3.hmm 288 ailrYeeass.aeptska 304 +i+r + + ++p+s++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 365 GIVRVSPINGyTNPQSSQ 382 888877766656666655 PP == domain 2 score: -1.3 bits; conditional E-value: 0.22 AA1_3.hmm 194 ysevklekgkkyrlrlintsvdstfkfsidgHkltvia 231 +v++ + + y l l+nt + f++ g +++++a 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 529 VPSVTFPTAEWYDLYLVNTDAGLNHPFHLHGMDMHLVA 566 55677888888999999999999999998888887775 PP == domain 3 score: -0.6 bits; conditional E-value: 0.13 AA1_3.hmm 100 tYefratqyGtswYHsHyslQyadGvlGplvin 132 + + ra+ G + H H + G +G +v++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 602 VARVRADLVGVWMMHCHMGGHLSGGFVGVVVVQ 634 557789999*******************99986 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 176.8 0.0 1.3e-55 1.3e-55 2 257 .. 73 368 .. 72 398 .. 0.90 2 ? 1.6 0.0 0.025 0.025 141 194 .. 484 566 .. 478 572 .. 0.80 3 ! 6.0 0.0 0.0011 0.0011 76 106 .. 607 637 .. 592 646 .. 0.81 Alignments for each domain: == domain 1 score: 176.8 bits; conditional E-value: 1.3e-55 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 rrv+ +N q P p ie+n gd++e+++ N+l +++ s+H+HGl+qngtn+ DG 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 73 RRVLVINKQMPGPLIEANDGDNLEITVINQL-NSPLSFHWHGLHQNGTNWEDG 124 89*****************************.99******************* PP AA1_2.hmm 55 asmvtqCpip.pgetltYeftveeqvGtYW......yH.........sHskgq 91 ++vtqCpip g ++tY+f++++q+Gt+ yH +H+++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 125 ITAVTQCPIPaSGGRYTYKFQLRKQYGTFCkdqlnsYHtlkdclyqtAHHQNL 177 *********835899**************655555578555555555688899 PP AA1_2.hmm 92 YeDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..y 138 DG+ gpli++ +e+p ++d+e++l+l+dwYh+ s+e+v+++ s+ y 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 178 KADGILGPLIVHSTEDPLkrgvDFDQEIVLMLTDWYHTMSSEIVRQLRSPkgY 230 99*************9988888*************************999555 PP AA1_2.hmm 139 nptgaepipdsllv.................netenatlevepgktYllriin 174 ++ p p+s+l+ ++t+ +++v +g + ++rii 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 231 AGSASAPSPNSALMngvgeyncrfatksercKTTSPPEFSVAAGSKVRFRIIG 283 566678***********************99999999**************** PP AA1_2.hmm 175 vgafasqylvledhemtivevDGvdvepse.vdslyiavaQRysvLvkaknd. 225 g +a++y++ ++h +++ e+D++ v+ + ++ +++ +QRys +v+ ++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 284 GGSLAMFYFSADQHVLNVTEADATPVHGPTgIHRVKLHNGQRYSAIVTIGEKe 336 **************************955549****************98773 PP AA1_2.hmm 226 tsknyalvakmdetmldvvpddlqlnvtstlv 257 + +++ + +m+++ + v +d+ql + ++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 337 AGSSFYIRGTMESDCWSWVNNDVQLTAYGIVR 368 669********************998877665 PP == domain 2 score: 1.6 bits; conditional E-value: 0.025 AA1_2.hmm 141 tgaepipdsllv.............................netenatlevep 164 g pip++ + n t+ ++++ + 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 484 AGPPPIPKNGVArwfvnnvtweaftyqpilfdltpggvgrvNGTRVPSVTFPT 536 56677777777777777777777777777778888888887888888899999 PP AA1_2.hmm 165 gktYllriinvgafasqylvledhemtive 194 + Y l ++n+ a ++ ++l + +m++v 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 537 AEWYDLYLVNTDAGLNHPFHLHGMDMHLVA 566 999999999999999999999999999885 PP == domain 3 score: 6.0 bits; conditional E-value: 0.0011 AA1_2.hmm 76 eeqvGtYWyHsHskgqYeDGlrgpliiedke 106 + vG + +H+H++g+ + G+ g+++++++e 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 607 ADLVGVWMMHCHMGGHLSGGFVGVVVVQPDE 637 46799999********************987 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 180.1 0.0 1.2e-56 1.2e-56 2 255 .. 67 353 .. 66 389 .. 0.83 2 ? -2.5 0.0 0.47 0.47 159 207 .. 520 565 .. 503 570 .. 0.79 3 ? -2.6 0.0 0.52 0.52 78 113 .. 599 634 .. 594 642 .. 0.79 Alignments for each domain: == domain 1 score: 180.1 bits; conditional E-value: 1.2e-56 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhgl 54 spDGf r++ ++n+++pgpli ++ gd+++i+v+n+L+ + s hwhgl 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 67 SPDGFLRRVLVINKQMPGPLIEANDGDNLEITVINQLNSP-----LSFHWHGL 114 7***********************************9875.....69****** PP AA1_1.hmm 55 fqkgtnwadgpafvtqCPi.apgnsflydfkvpdqaGtfw......YH..... 95 +q+gtnw+dg + vtqCPi a+g ++y+f++++q Gtf YH 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 115 HQNGTNWEDGITAVTQCPIpASGGRYTYKFQLRKQYGTFCkdqlnsYHtlkdc 167 *******************446899**************55555559944443 PP AA1_1.hmm 96 ....shlstqycdglrGalvvydpedplkslydvddestvitladwyhtaake 144 +h+++ dg+ G+l+v+ edplk+ d+d+e v++l+dwyht+++e 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 168 lyqtAHHQNLKADGILGPLIVHSTEDPLKRGVDFDQE-IVLMLTDWYHTMSSE 219 333347777779**********************987.699***********9 PP AA1_1.hmm 145 ll............klvavadstlinGlgryagg........peaelavvnve 177 + + ++ ++s+l+nG+g y+ ++++ +v+ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 220 IVrqlrspkgyagsASAPSPNSALMNGVGEYNCRfatksercKTTSPPEFSVA 272 999999999999887889***********9984433334444555566789** PP AA1_1.hmm 178 kgkrYrfrlvsiscdpnftfsidghnltvieadgvn.tkpltvdsiqifagqr 229 +g + rfr++ + + f fs d+h l+v ead++ + p+ ++++++ gqr 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 273 AGSKVRFRIIGGGSLAMFYFSADQHVLNVTEADATPvHGPTGIHRVKLHNGQR 325 **********************************98256999*********** PP AA1_1.hmm 230 ysvvleanqe..vdnYwiranpnlgknt 255 ys +++ ++ + ++ir ++++ + 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 326 YSAIVTIGEKeaGSSFYIRGTMESDCWS 353 ****997554114589999999887633 PP == domain 2 score: -2.5 bits; conditional E-value: 0.47 AA1_1.hmm 159 GlgryaggpeaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvi 207 G+gr++g+ + v+ + + Y + lv++ + n+ f + g +++++ 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 520 GVGRVNGTR---VPSVTFPTAEWYDLYLVNTDAGLNHPFHLHGMDMHLV 565 666666543...3456667778899999999999999999999888776 PP == domain 3 score: -2.6 bits; conditional E-value: 0.52 AA1_1.hmm 78 sflydfkvpdqaGtfwYHshlstqycdglrGalvvy 113 sf+ +d G + H h+ g G +vv 199234|Melli1_GeneCatalog_proteins_20150227.aa.fasta|AA1 599 SFVVARVRADLVGVWMMHCHMGGHLSGGFVGVVVVQ 634 6666666678899999***************99985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (667 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 57.50 // Query: 6799|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 [L=107] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-15 45.8 0.0 1.4e-15 45.7 0.0 1.1 1 AA1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.7 0.0 3.6e-16 1.4e-15 310 357 .. 21 68 .. 2 69 .. 0.89 Alignments for each domain: == domain 1 score: 45.7 bits; conditional E-value: 3.6e-16 AA1.hmm 310 vnfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 +++++e++ +rdtv+vp+ + vvir++ad pg w++hchi +H++ G 6799|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 21 IQYNTENPLRRDTVVVPPASFVVIRLHADIPGAWIMHCHIGWHIAGGF 68 4788999999***********************************997 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (107 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 3 (0.75); expected 0.0 (0.001) Passed Fwd filter: 1 (0.25); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 141.62 // Query: 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 [L=543] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-53 171.0 0.0 1.6e-53 170.6 0.0 1.2 1 AA1.hmm 9.5e-37 114.8 0.0 1.4e-35 110.9 0.0 2.2 2 AA1_2.hmm 5.6e-32 99.2 0.0 3.7e-31 96.5 0.0 1.9 2 AA1_3.hmm 1.8e-30 94.1 0.0 4e-30 93.0 0.0 1.6 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 170.6 0.0 1.6e-53 1.6e-53 100 357 .. 2 504 .. 1 505 [. 0.79 Alignments for each domain: == domain 1 score: 170.6 bits; conditional E-value: 1.6e-53 AA1.hmm 100 adGlrGaliirdpks..kekydvddeelvillsdwyhktaeell....ke 143 adG+ G+lii++p++ k+++d+d +++v++l+dwyh+t+++++ +e 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 2 ADGINGPLIIHSPRDplKRHVDFD-QDVVLILADWYHNTSTDIVehmlSE 50 79*********9966444489998.889***************9888833 PP AA1.hmm 144 n...atgaepapdsllinGkgrlyncs...........sklevlkvepgk 179 + t a+p p+s+linG g+ ncs ++ ++++++g 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 51 AgyfGTPAAPGPNSALINGIGEW-NCSqaskaqqckqiNPPPEFTFKAGD 99 34345666666**********97.563344455554555556******** PP AA1.hmm 180 tyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqr 228 + r+rlina+++a++++s+d+H+l+v eaDg+ v p ++ + ++ Gqr 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 100 KIRFRLINAGVHAMFFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQR 149 *******************************99854899*********** PP AA1.hmm 229 ydvllkanqsa..gnywiraslds...a....afdnttalailrYkgass 269 y+v++k+++++ +++++ra++ds a + + t+ +ilr +++s 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 150 YSVVIKTKKEDagKSFYLRATMDSdcwAwvpdD-IQLTGFGILRLVDDES 198 ******98888777******9999766255644.57899******77433 PP AA1.hmm 270 as................................................ 271 + 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 199 KIkkisqsqtrpqtkdwpdeilgdcidlptsslvpilkesvpnsvvgsgs 248 325677777889999*********************************** PP AA1.hmm 272 .................................................. 271 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 249 fkagfgfqfinntalhltraqavklaqkvnasslslttnprteelqttnd 298 *************9999999999999999999999999998888888888 PP AA1.hmm 272 .................................................. 271 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 299 tasflrngtartllnarsksveglwnldesesltalakrqvsvgqknlpp 348 88888888888888888888877777777777777777777777777777 PP AA1.hmm 272 .............................nvsf.vepstslleaysgvde 291 n+s+ + p ++l+++ 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 349 gnrtnmlgitrtggppptpagtigkfflnNISWtTYPYRPVLHDL----- 393 777777777777777777777777777766666444555665553..... PP AA1.hmm 292 tkaklkln...................................hp..lhg 304 hp lh 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 394 -------TpggvgavngsnvanviyptsewydlylanidpagsHPyhLHA 436 .......033333333333333445555666666777888899******* PP AA1.hmm 305 hdfvvv...............nfdaedeakrdtvavpkggwvvirfvadn 339 +d+++v ++++ ++ +rdt++vp+ + +vir++ad 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 437 MDMHIVaegkglptpenlakvSYNTANPLRRDTIVVPPASFTVIRLRADI 486 ******877777766655544444777777******************** PP AA1.hmm 340 pgvwllhchieaHlsmGl 357 pg w++hchi +H++ G 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 487 PGAWIVHCHIGWHIAAGF 504 ***************997 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 110.9 0.0 1.4e-35 1.4e-35 93 268 .. 2 203 .. 1 227 [. 0.89 2 ? 1.3 0.0 0.031 0.031 77 106 .. 485 514 .. 471 522 .. 0.83 Alignments for each domain: == domain 1 score: 110.9 bits; conditional E-value: 1.4e-35 AA1_2.hmm 93 eDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk. 137 DG+ gplii+ +++p ++d++++l+l+dwYh++s+++v+++ls+ 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 2 ADGINGPLIIHSPRDPLkrhvDFDQDVVLILADWYHNTSTDIVEHMLSEa 51 6***********997776777***************************96 PP AA1_2.hmm 138 .ynptgaepipdsllv..................netenatlevepgktY 168 y t a p p+s+l+ + + ++++++g + 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 52 gYFGTPAAPGPNSALIngigewncsqaskaqqckQINPPPEFTFKAGDKI 101 66778899*********************9998877778899******** PP AA1_2.hmm 169 llriinvgafasqylvledhemtivevDGvdve.psevdslyiavaQRys 217 ++r+in g+ a+++ ++++h++++ e+DG+ v p + + + +QRys 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 102 RFRLINAGVHAMFFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRYS 151 ******************************9972556899********** PP AA1_2.hmm 218 vLvkaknd.tsknyalvakmdetmldvvpddlqlnvtstlvydksaalae 266 v++k+k++ + k++ l a+md++ + vpdd+ql l+ +++++ + 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 152 VVIKTKKEdAGKSFYLRATMDSDCWAWVPDDIQLTGFGILRLVDDESKIK 201 *****997366***********************9999988777666655 PP AA1_2.hmm 267 as 268 + 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 202 KI 203 54 PP == domain 2 score: 1.3 bits; conditional E-value: 0.031 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke 106 + G++ +H+H + + G+ g++i++++ 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 485 DIPGAWIVHCHIGWHIAAGFAGVVIVQPDV 514 5579999*******************9875 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 96.5 0.0 3.7e-31 3.7e-31 122 291 .. 2 192 .. 1 213 [. 0.80 2 ? 0.1 0.0 0.079 0.079 94 139 .. 473 518 .. 470 529 .. 0.80 Alignments for each domain: == domain 1 score: 96.5 bits; conditional E-value: 3.7e-31 AA1_3.hmm 122 adGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae.. 164 adG+ Gpl+i+ P + ++d+d+ +l+l+dw+h++ +++ve++ 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 2 ADGINGPLIIHSPrdplkRHVDFDQDV-VLILADWYHNTSTDIVEHMLse 50 79**********954433346677665.6789***********9999877 PP AA1_3.hmm 165 ....asggppvadniLingknkvkkskk......eeegeysevklekgkk 204 + ++p ++ Ling +++++s++ ++ + e+++++g k 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 51 agyfGTPAAPGPNSALINGIGEWNCSQAskaqqcKQINPPPEFTFKAGDK 100 765555667899*************998665444444445569******* PP AA1_3.hmm 205 yrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRy 253 r+rlin++v+++f +s+d+H+l+v +aD + p + ++++ gqRy 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 101 IRFRLINAGVHAMFFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRY 150 ********************************9658899*********** PP AA1_3.hmm 254 dviveanqe..eenywlraelaeaCskl..naeekeikailr 291 v++++++e ++++lra+++++C ++ ++ + + +ilr 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 151 SVVIKTKKEdaGKSFYLRATMDSDCWAWvpDDIQLTGFGILR 192 *******998899************98622233444445555 PP == domain 2 score: 0.1 bits; conditional E-value: 0.079 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasany 139 +p + ++ + ra+ G H H+ a+G +G ++++ +++ 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 473 PPASFTVIRLRADIPGAWIVHCHIGWHIAAGFAGVVIVQPDVIKQF 518 5666666788899999999****************99986655555 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 93.0 0.0 4e-30 4e-30 103 251 .. 2 173 .. 1 198 [. 0.84 Alignments for each domain: == domain 1 score: 93.0 bits; conditional E-value: 4e-30 AA1_1.hmm 103 cdglrGalvvydpedplkslydvddestvitladwyhtaakell...... 146 dg+ G+l+++ p+dplk+ d+d++ v+ ladwyh++++++ 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 2 ADGINGPLIIHSPRDPLKRHVDFDQD-VVLILADWYHNTSTDIVehmlse 50 69*********************976.6899**********999899999 PP AA1_1.hmm 147 ......klvavadstlinGlgryagg...peaelavvn......vekgkr 181 +++ ++s+linG+g ++ + ++++ +n ++g + 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 51 agyfgtPAAPGPNSALINGIGEWNCSqasKAQQCKQINpppeftFKAGDK 100 99998777799***********9955122333344443222222899*** PP AA1_1.hmm 182 Yrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqry 230 rfrl++ ++ f +s+d+h+l+v eadg+ + p +++ + gqry 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 101 IRFRLINAGVHAMFFYSVDEHTLNVTEADGTGVyGPPALHRVWLHNGQRY 150 ******************************97636999************ PP AA1_1.hmm 231 svvleanqe..vdnYwiranpnl 251 svv+++++e + +++ra++++ 6812|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 151 SVVIKTKKEdaGKSFYLRATMDS 173 ****9987621468999999876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (543 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.01s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 119.97 // Query: 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 [L=643] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.9e-100 323.1 0.1 8.9e-100 322.7 0.1 1.1 1 AA1.hmm 3.8e-77 247.5 0.0 1e-76 246.2 0.0 1.6 3 AA1_3.hmm 2.1e-71 228.5 0.0 7.8e-71 226.7 0.0 1.7 2 AA1_1.hmm 3.5e-70 224.7 0.1 1.6e-68 219.2 0.0 2.9 4 AA1_2.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 322.7 0.1 8.9e-100 8.9e-100 6 354 .. 59 601 .. 54 607 .. 0.84 Alignments for each domain: == domain 1 score: 322.7 bits; conditional E-value: 8.9e-100 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGl 51 + + rsv+++N+q+PgP+ieanegD v+vtV Nkl + ++tiHwhGl 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 59 TgapdgFWRSVLAINNQMPGPLIEANEGDDVEVTVINKL-DSPLTIHWHGL 108 455555789******************************.68********* PP AA1.hmm 52 rqlgtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadG 102 q+gtnw+DG +g+tqcpi++g ++tY+ft+ +q+Gt+wyH+H++ ++dG 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 109 YQNGTNWEDGISGITQCPIPAGVTYTYKFTLANQYGTFWYHAHYQSLKTDG 159 *************************************************** PP AA1.hmm 103 lrGaliirdpks..kekydvddeelvillsdwyhktaeell.....ken.. 144 l+G+l++++p++ k+ d+d ee+v+ll+dwyh+ ++ + + + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 160 LVGPLVVHSPRDplKRGIDFD-EEIVLLLQDWYHTPSNVIDpqmrsT-Qgy 208 ********9965444489998.999***********99888777752.233 PP AA1.hmm 145 .atgaepapdsllinGkgrlync......s....sklevlkvepgktyrlr 184 ++p ++s+linG g+ +c + ++ ++++ +g++ r+r 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 209 mGFPSPPSANSALINGIGQW-DCrfaltdDrcrkNSPPEFHLVAGTKTRFR 258 455667779*********96.565666551454444569************ PP AA1.hmm 185 linaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllk 234 li a+++a+++fs d+H+l+v eaD+++v+ p ++ ++ + Gqry+v+l+ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 259 LIQAGSHAMFFFSADEHTLNVTEADATPVHgPPAIHRVKFHNGQRYSVILS 309 ****************************9868999**************** PP AA1.hmm 235 ..anqsagnywiraslds...a....afdnttalailrYkgassas..... 271 an++ +++ +ras+d + ++ta ai+r +a++ + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 310 vaANETGTSFFLRASMDPdcwVwvtsD-LQKTAFAIIRVVDATTRTfstkr 359 87777779******9988666155544.57899******987766688899 PP AA1.hmm 272 ................................................... 271 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 360 ptsrdwadringdcrdldpntlvpiipvrvpqtvdgagalavglgfrvfst 410 99999********************************************** PP AA1.hmm 272 ................................................... 271 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 411 gaqlptsagvpssnnsrpthpvlqikdiksgivsipppgtnttlpsitvna 461 *************************************99999999999999 PP AA1.hmm 272 ................nvsfvepstsllea.y.sgv.....detka..... 294 nv+++ ++++ + + + d + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 462 qvtsapagaggayfvnNVTWQANQLNPVLHdFaA-GgpgrtD---Nskias 508 9999999999999999899988876543333532.2354442...122355 PP AA1.hmm 295 ................klklnhp..lhghdfvvv.............nfd. 313 + +nhp lhg ++++v n 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 509 vvyptlgwydlylvnlEQATNHPfhLHGPEMHIVaigtgtptpenlrN-Lt 558 555555666555554444445*************88877776654441.04 PP AA1.hmm 314 ..aedeakrdtvavpkggwvvirfvadnpgvwllhchieaHls 354 ++++ +rdt+ ++ g ++vir+++d pg+w++hchi++Hl+ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 559 ysTQNPLRRDTIFLQGGTYAVIRLRTDLPGIWAVHCHIQFHLT 601 55888888*********************************85 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 246.2 0.0 1e-76 1e-76 6 303 .. 41 358 .. 36 370 .. 0.85 2 ? -3.7 0.0 1.2 1.2 204 231 .. 516 543 .. 491 544 .. 0.78 3 ? -3.9 0.0 1.4 1.4 113 139 .. 592 618 .. 582 620 .. 0.80 Alignments for each domain: == domain 1 score: 246.2 bits; conditional E-value: 1e-76 AA1_3.hmm 6 kvpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlev 56 +v ++ + r+y++ vt++t apDG+ +++l++n+q+Pgp+iea+ GD +ev 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 41 EVSSKKRLRKYEWIVTNTTGAPDGFWRSVLAINNQMPGPLIEANEGDDVEV 91 56678899******************************************* PP AA1_3.hmm 57 tvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr.at 106 tv n+l+ +iHwHG+ q+ tn++DG++g+tqCpi+ g ++tY+f+ a+ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 92 TVINKLD-SPLTIHWHGLYQNGTNWEDGISGITQCPIPAGVTYTYKFTlAN 141 ******8.5789***********************************7589 PP AA1_3.hmm 107 qyGtswYHsHyslQyadGvlGplvinGPas.....anydvdlgpllltdws 152 qyGt wYH+Hy+ +dG++Gplv++ P ++d++ +lll+dw+ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 142 QYGTFWYHAHYQSLKTDGLVGPLVVHSPRDplkrgIDFDEE-IVLLLQDWY 191 ***************************95422211455555.46789**** PP AA1_3.hmm 153 hesafelveeae......asggppvadniLingknkvkkskk.....eeeg 192 h+ + + +++ +pp+a++ Ling ++++++ + +++ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 192 HTPSNVIDPQMRstqgymGFPSPPSANSALINGIGQWDCRFAltddrCRKN 242 *998777666664445544556799**************888888776678 PP AA1_3.hmm 193 eysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pytt 242 + e++l +g+k r+rli ++++++f fs d+H+l+v +aD p++ p 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 243 SPPEFHLVAGTKTRFRLIQAGSHAMFFFSADEHTLNVTEADATPVHgPPAI 293 8889*****************************************868899 PP AA1_3.hmm 243 dslligigqRydvi..veanqeeenywlraelaeaCskl..naeekeikai 289 + + + gqRy vi v an++ ++++lra+++ +C + ++ +k++ ai 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 294 HRVKFHNGQRYSVIlsVAANETGTSFFLRASMDPDCWVWvtSDLQKTAFAI 344 **************44467888**************987323556677788 PP AA1_3.hmm 290 lrYeeassaeptsk 303 +r +a++++ ++k 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 345 IRVVDATTRTFSTK 358 88877777554333 PP == domain 2 score: -3.7 bits; conditional E-value: 1.2 AA1_3.hmm 204 kyrlrlintsvdstfkfsidgHkltvia 231 y l l+n + f++ g +++++a 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 516 WYDLYLVNLEQATNHPFHLHGPEMHIVA 543 5888899999999999999999998886 PP == domain 3 score: -3.9 bits; conditional E-value: 1.4 AA1_3.hmm 113 YHsHyslQyadGvlGplvinGPasany 139 H H++ +d lG +vi+ + +n+ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 592 VHCHIQFHLTDWFLGMIVIQPDKIKNF 618 699999999999999999987666665 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 226.7 0.0 7.8e-71 7.8e-71 2 282 .. 61 361 .. 61 391 .. 0.88 2 ? -1.4 0.0 0.22 0.22 180 218 .. 515 553 .. 484 562 .. 0.77 Alignments for each domain: == domain 1 score: 226.7 bits; conditional E-value: 7.8e-71 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwh 52 +pDGf rs+ +n+++pgpli +++gd+++++v+n+L+ + +ihwh 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 61 APDGFWRSVLAINNQMPGPLIEANEGDDVEVTVINKLDSP-----LTIHWH 106 69**********************************9876.....68**** PP AA1_1.hmm 53 glfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqyc 103 gl+q+gtnw+dg + +tqCPi +g +++y+f++++q GtfwYH+h+++ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 107 GLYQNGTNWEDGISGITQCPIPAGVTYTYKFTLANQYGTFWYHAHYQSLKT 157 *************************************************** PP AA1_1.hmm 104 dglrGalvvydpedplkslydvddestvitladwyhtaakell........ 146 dgl G+lvv+ p+dplk+ d+d+e v+ l dwyht+++ + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 158 DGLVGPLVVHSPRDPLKRGIDFDEE-IVLLLQDWYHTPSNVIDpqmrstqg 207 **********************865.7999*********999889999999 PP AA1_1.hmm 147 ....klvavadstlinGlgryagg........peaelavvnvekgkrYrfr 185 ++ a+s+linG+g++ +++ + +g++ rfr 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 208 ymgfPSPPSANSALINGIGQWDCRfaltddrcRKNSPPEFHLVAGTKTRFR 258 99887889***********988443333444455556789999******** PP AA1_1.hmm 186 lvsiscdpnftfsidghnltvieadgvn.tkpltvdsiqifagqrysvvle 235 l++ +++ f fs d+h+l+v ead++ + p +++++ gqrysv+l+ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 259 LIQAGSHAMFFFSADEHTLNVTEADATPvHGPPAIHRVKFHNGQRYSVILS 309 **************************9825699****************85 PP AA1_1.hmm 236 ..anqevdnYwiranpnlgk...ntgfegginsailrykgapeaePttkqk 281 an++ +++ra+++ t+ +++ ai+r a++ +tk+ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 310 vaANETGTSFFLRASMDPDCwvwVTSDLQKTAFAIIRVVDATTRTFSTKRP 360 4499***********998876665555567778999999998776666554 PP AA1_1.hmm 282 a 282 + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 361 T 361 4 PP == domain 2 score: -1.4 bits; conditional E-value: 0.22 AA1_1.hmm 180 krYrfrlvsiscdpnftfsidghnltvieadgvntkplt 218 Y + lv++ +n+ f + g +++++ + + + +p + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 515 GWYDLYLVNLEQATNHPFHLHGPEMHIVAIGTGTPTPEN 553 569999********************9988766666655 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 219.2 0.0 1.6e-68 1.6e-68 2 268 .. 67 357 .. 66 413 .. 0.86 2 ? -3.4 0.0 0.85 0.85 297 326 .. 457 487 .. 452 496 .. 0.63 3 ? 0.5 0.0 0.055 0.055 168 198 .. 517 547 .. 501 563 .. 0.83 4 ? 0.2 0.1 0.066 0.066 78 106 .. 586 614 .. 573 620 .. 0.83 Alignments for each domain: == domain 1 score: 219.2 bits; conditional E-value: 1.6e-68 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnam 52 r+v+++N+q P p ie+n+gd vev++ N+l d++ ++H+HGl+qngtn+ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 67 RSVLAINNQMPGPLIEANEGDDVEVTVINKL-DSPLTIHWHGLYQNGTNWE 116 899****************************.99***************** PP AA1_2.hmm 53 DGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliie 103 DG s++tqCpip g t+tY+ft+ +q+Gt+WyH+H+++ +DGl gpl+++ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 117 DGISGITQCPIPAGVTYTYKFTLANQYGTFWYHAHYQSLKTDGLVGPLVVH 167 *************************************************** PP AA1_2.hmm 104 dkeepy....eydeeltltlsdwYheeskelvkeflskynptg..aepipd 148 +++p ++dee++l l dwYh+ s+ + ++ s++ g p + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 168 SPRDPLkrgiDFDEEIVLLLQDWYHTPSNVIDPQMRSTQGYMGfpSPPSAN 218 ***9988888*************************9997777622567778 PP AA1_2.hmm 149 sllv.................netenatlevepgktYllriinvgafasqy 182 s+l+ +++ ++++ +g++ ++r+i g a+++ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 219 SALIngigqwdcrfaltddrcRKNSPPEFHLVAGTKTRFRLIQAGSHAMFF 269 8999***************998889999*********************** PP AA1_2.hmm 183 lvledhemtivevDGvdvepse.vdslyiavaQRysvLvk.akndtsknya 231 ++ ++h++++ e+D++ v+ + ++ ++ +QRysv+++ a n+t +++ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 270 FSADEHTLNVTEADATPVHGPPaIHRVKFHNGQRYSVILSvAANETGTSFF 320 ******************96554999***********9983667799**** PP AA1_2.hmm 232 lvakmdetmldvvpddlqlnvtstlvydksaalaeas 268 l a+md + + v +dlq + + ++ ++++ + ++ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 321 LRASMDPDCWVWVTSDLQKTAFAIIRVVDATTRTFST 357 ******************9999988766555444333 PP == domain 2 score: -3.4 bits; conditional E-value: 0.85 AA1_2.hmm 297 ieldvemdnlkdg.vnyaffNnitYvapkvp 326 i+++ ++++ g +f+Nn+t++a + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 457 ITVNAQVTSAPAGaGGAYFVNNVTWQANQLN 487 4555555555555223567899999987654 PP == domain 3 score: 0.5 bits; conditional E-value: 0.055 AA1_2.hmm 168 YllriinvgafasqylvledhemtivevDGv 198 Y l ++n+ + +++ ++l + em+iv + 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 517 YDLYLVNLEQATNHPFHLHGPEMHIVAIGTG 547 9999**********************98654 PP == domain 4 score: 0.2 bits; conditional E-value: 0.066 AA1_2.hmm 78 qvGtYWyHsHskgqYeDGlrgpliiedke 106 G + +H+H + + +D + g+++i++++ 124658|Mellp2_3_GeneCatalog_proteins_20151130.aa.fasta|AA1 586 LPGIWAVHCHIQFHLTDWFLGMIVIQPDK 614 5688889*******************987 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (643 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 122.71 // Query: 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 [L=693] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.4e-89 289.2 0.0 1.8e-89 288.8 0.0 1.1 1 AA1.hmm 1e-67 216.6 0.3 3.7e-67 214.8 0.1 1.8 2 AA1_3.hmm 5.8e-62 197.7 0.1 5e-60 191.3 0.0 2.8 3 AA1_2.hmm 4.5e-57 181.5 0.1 9.4e-57 180.4 0.0 1.5 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 288.8 0.0 1.8e-89 1.8e-89 7 357 .. 93 655 .. 82 656 .. 0.78 Alignments for each domain: == domain 1 score: 288.8 bits; conditional E-value: 1.8e-89 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgt..n 57 ++r+v+++Ngq+PgP+ie+negDt++vtV+N l ++g++iHwhG++q+gt 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 93 FSRPVLVINGQTPGPLIEVNEGDTLEVTVVNLL-DDGLSIHWHGIHQNGTksV 144 899*****************************9.78***********887336 PP AA1.hmm 58 waDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGalii 109 w+DG g+tqcpi+ g +tY+ft+++q Gt+ ++H++ +adG++G+li+ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 145 WEDGITGITQCPIPErGGIYTYRFTINKQFGTF-CNAHHKNLKADGIMGPLIV 196 9************989***************96.69***************** PP AA1.hmm 110 rdpkske....kydvddeelvillsdwyhktaeell.....ken...atgaep 150 ++ + + + +d ee+v++++dwyh++++ ++ + + +++a+p 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 197 HSVR--DplkrGVHFD-EEMVVMVTDWYHDQSSVVIdqmrsN-QgyrNSSAAP 245 *753..2233445555.999***********99988888762.2345678888 PP AA1.hmm 151 apdsllinGkgrlync.....s.....sklevlkvepgktyrlrlinaalnae 193 ++s+linG g +c s ++ + ++ +gk+ rlr in +++a+ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 246 SANSGLINGVGLW-DCrfastSercklNSPPEYTFAAGKRLRLRWINGGSHAM 297 8*********975.675665414555644569********************* PP AA1.hmm 194 ltfsidnHkltvieaDgvyvkp.yevdslqiapGqrydvllkanqsa..gnyw 243 +++s d H+l+v+eaD++ v e++ ++i+ Gqry+++++ +++ +++w 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 298 FYVSADRHTLNVVEADATAVYSaNEIHRVKIHNGQRYSAIITLGSDEvgQSFW 350 *******************9873579****************54444457*** PP AA1.hmm 244 iraslds...a....afdnttalailrYkgassas.................. 271 +ra +++ + + tala++r + s++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 351 LRAVMETdcwVwvtgD-IQLTALAVIRVISPGSEEfpqanqplptttdwadlp 402 ***8888666154544.578889999997733333566667789999999999 PP AA1.hmm 272 ..................................................... 271 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 403 dgsctdldsntllpilpvsvpsmpagtgtftaafgfqsiatgaqvplpppsnt 455 99999999***********************************9999999988 PP AA1.hmm 272 ..................................................... 271 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 456 stptnsstqsnssaptdpsttttsrspamrrrqvnvtpydplppfgtatsqpp 508 88887777777666666666666666666666666666666666666666666 PP AA1.hmm 272 .....................nvsfvepstslleaysgvdetkaklkln.... 299 n+++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 509 vvvnggppsppagtegrffvnNITY-----------------------Vthpf 538 6666666666666655555554444.......................03333 PP AA1.hmm 300 ..........................................hp..lhghdfv 308 hp lhg+d++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 539 qpvlydvapggsgfvnstsiasvefptaewydlilvsvdpidHPfhLHGMDMH 591 333333333334444444444444555577777777888888*********** PP AA1.hmm 309 vv...............nfdaedeakrdtvavpkggwvvirfvadnpgvwllh 346 +v ++ +e++ +rdtv+v g+ ++ r+ ad pg w++h 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 592 IVgtgqglptpenlgkvKYRTENPLRRDTVVVSGGSFLIARVLADLPGAWMMH 644 **988888776655544444999999*************************** PP AA1.hmm 347 chieaHlsmGl 357 ch+ +Hl +G 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 645 CHMGWHLGVGF 655 *******9995 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 214.8 0.1 3.7e-67 3.7e-67 7 279 .. 70 362 .. 66 394 .. 0.86 2 ? -1.4 0.0 0.24 0.24 108 142 .. 638 672 .. 620 679 .. 0.86 Alignments for each domain: == domain 1 score: 214.8 bits; conditional E-value: 3.7e-67 AA1_3.hmm 7 vpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvk 59 +++ gv+r+++l v+++t apDG+++++l++ngq+Pgp+ie + GDtlevtv+ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 70 INQSGVIRRFQLVVSNVTGAPDGFSRPVLVINGQTPGPLIEVNEGDTLEVTVV 122 5679************************************************* PP AA1_3.hmm 60 nnlkknGtsiHwHGirqlnt..neqDGvpgvtqCpia.pgesftYefra.tqy 108 n l+ +G siHwHGi+q+ t ++DG++g+tqCpi+ +g +tY+f++ +q+ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 123 NLLD-DGLSIHWHGIHQNGTksVWEDGITGITQCPIPeRGGIYTYRFTInKQF 174 9886.8***********8652269************73699******983578 PP AA1_3.hmm 109 GtswYHsHyslQyadGvlGplvinG...P..asanydvdlgpllltdwshesa 156 Gt + +H+ adG++Gpl+++ P ++d++ ++++tdw+h++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 175 GT-FCNAHHKNLKADGIMGPLIVHSvrdPlkRGVHFDEE-MVVMVTDWYHDQS 225 87.7789999999*********99733353234677777.47899*******9 PP AA1_3.hmm 157 felveeae......asggppvadniLingknkvkkskk.....eeegeysevk 198 + ++++++ +s+++p+a+++Ling + ++++ + + ++ e + 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 226 SVVIDQMRsnqgyrNSSAAPSANSGLINGVGLWDCRFAstserCKLNSPPEYT 278 99999888777877777889***************88766554445556679* PP AA1_3.hmm 199 lekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepy.ttdslligig 250 + +gk+ rlr in +++++f +s d H+l+v++aD ++ + + + + i+ g 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 279 FAAGKRLRLRWINGGSHAMFYVSADRHTLNVVEADATAVYSAnEIHRVKIHNG 331 ***************************************87615699****** PP AA1_3.hmm 251 qRydviveanqe..eenywlraelaeaCskl 279 qRy i++ ++ +++wlra ++++C + 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 332 QRYSAIITLGSDevGQSFWLRAVMETDCWVW 362 ******997776679*************764 PP == domain 2 score: -1.4 bits; conditional E-value: 0.24 AA1_3.hmm 108 yGtswYHsHyslQyadGvlGplvinGPasanydvd 142 G + H H + G G ++++ + a++d+ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 638 PGAWMMHCHMGWHLGVGFGGVVIVQRDKIAQFDIP 672 588899*******************9999999985 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 191.3 0.0 5e-60 5e-60 2 259 .. 95 378 .. 94 421 .. 0.89 2 ? -0.5 0.0 0.11 0.11 312 331 .. 525 545 .. 459 550 .. 0.83 3 ? 2.4 0.0 0.014 0.014 72 106 .. 631 665 .. 620 673 .. 0.79 Alignments for each domain: == domain 1 score: 191.3 bits; conditional E-value: 5e-60 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngt..nam 52 r+v+ +Ngq P p ievn+gd++ev++ N l d s+H+HG++qngt + 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 95 RPVLVINGQTPGPLIEVNEGDTLEVTVVNLL-DDGLSIHWHGIHQNGTksVWE 146 99*****************************.779***********9944567 PP AA1_2.hmm 53 DGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrgpliied 104 DG +++tqCpip+ g +tY+ft+++q Gt+ +H+k+ DG+ gpli++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 147 DGITGITQCPIPErGGIYTYRFTINKQFGTF-CNAHHKNLKADGIMGPLIVHS 198 ***********9735679************9.679999999************ PP AA1_2.hmm 105 keepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsll 151 ++p ++dee++++++dwYh++s+ +++++ s+ y+++ a p +s l 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 199 VRDPLkrgvHFDEEMVVMVTDWYHDQSSVVIDQMRSNqgYRNSSAAPSANSGL 251 9988877889***********************9988779999********** PP AA1_2.hmm 152 v.................netenatlevepgktYllriinvgafasqylvled 187 + + ++ + ++ +gk+ +lr in g a++y++ + 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 252 IngvglwdcrfastsercKLNSPPEYTFAAGKRLRLRWINGGSHAMFYVSADR 304 ************9999987777788899************************* PP AA1_2.hmm 188 hemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmde 238 h++++ve+D+++v ++e++ ++i +QRys +++ +d ++++l a m++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 305 HTLNVVEADATAVYsANEIHRVKIHNGQRYSAIITLGSDeVGQSFWLRAVMET 357 ***********99615679***************98776377*********** PP AA1_2.hmm 239 tmldvvpddlqlnvtstlvyd 259 + + v d+ql + ++++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 358 DCWVWVTGDIQLTALAVIRVI 378 **********99998887654 PP == domain 2 score: -0.5 bits; conditional E-value: 0.11 AA1_2.hmm 312 yaffNnitYva.pkvptlltv 331 + f+NnitYv+ p p l+ v 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 525 RFFVNNITYVThPFQPVLYDV 545 5689*****853788998866 PP == domain 3 score: 2.4 bits; conditional E-value: 0.014 AA1_2.hmm 72 eftveeqvGtYWyHsHskgqYeDGlrgpliiedke 106 + + G++ +H+H++ + G+ g++i++ ++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 631 ARVLADLPGAWMMHCHMGWHLGVGFGGVVIVQRDK 665 5555677899*********************9876 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 180.4 0.0 9.4e-57 9.4e-57 2 261 .. 89 367 .. 88 401 .. 0.83 2 ? -3.3 0.0 0.84 0.84 75 113 .. 624 662 .. 622 668 .. 0.83 Alignments for each domain: == domain 1 score: 180.4 bits; conditional E-value: 9.4e-57 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhgl 54 +pDGfsr + ++ng++pgpli ++gd+++++vvn L+d sihwhg+ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 89 APDGFSRPVLVINGQTPGPLIEVNEGDTLEVTVVNLLDDG-----LSIHWHGI 136 69**********************************9985.....69****** PP AA1_1.hmm 55 fqkgtn..wadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqycd 104 +q+gt+ w+dg + +tqCPi + g ++y+f++++q Gtf +h+++ d 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 137 HQNGTKsvWEDGITGITQCPIPErGGIYTYRFTINKQFGTFC-NAHHKNLKAD 188 **7654339************875789*************97.577777789* PP AA1_1.hmm 105 glrGalvvydpedplkslydvddestvitladwyhtaakell........... 146 g+ G+l+v+ +dplk+ +d+e v++++dwyh +++ + 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 189 GIMGPLIVHSVRDPLKRGVHFDEE-MVVMVTDWYHDQSSVVIdqmrsnqgyrn 240 ********************9976.57789*******9998889999999998 PP AA1_1.hmm 147 .klvavadstlinGlgryagg..peaelav......vnvekgkrYrfrlvsis 190 ++++ a+s+linG+g + +++e + ++gkr r+r ++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 241 sSAAPSANSGLINGVGLWDCRfaSTSERCKlnsppeYTFAAGKRLRLRWINGG 293 87889**********96653211333333300011156799************ PP AA1_1.hmm 191 cdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvle..anqev 240 +++ f +s d h+l+v+ead++ + ++ ++++++i gqrys +++ +++ 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 294 SHAMFYVSADRHTLNVVEADATAVySANEIHRVKIHNGQRYSAIITlgSDEVG 346 ********************998725679*************99763267778 PP AA1_1.hmm 241 dnYwiranpnlgkntgfeggi 261 + +w+ra +++ ++g+i 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 347 QSFWLRAVMETDCWVWVTGDI 367 89*****99987744444444 PP == domain 2 score: -3.3 bits; conditional E-value: 0.84 AA1_1.hmm 75 pgnsflydfkvpdqaGtfwYHshlstqycdglrGalvvy 113 +g sfl ++d G++ H h+ g G ++v 678661|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 624 SGGSFLIARVLADLPGAWMMHCHMGWHLGVGFGGVVIVQ 662 677888888889999*********999999999998886 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (693 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 114.38 // Query: 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 [L=695] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.3e-84 270.8 0.0 7.4e-84 270.4 0.0 1.2 1 AA1.hmm 2.8e-64 205.3 0.0 1.6e-63 202.8 0.1 1.9 2 AA1_3.hmm 9.7e-59 187.1 0.0 1.1e-57 183.6 0.0 2.1 2 AA1_2.hmm 2e-52 166.2 0.0 4.1e-52 165.2 0.0 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 270.4 0.0 7.4e-84 7.4e-84 7 357 .. 73 657 .. 62 658 .. 0.81 Alignments for each domain: == domain 1 score: 270.4 bits; conditional E-value: 7.4e-84 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGv 62 + r+v+++Ngq+PgP+ieanegD++++tV+N++ s g+t+HwhG+ q t+ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 73 FLRPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQASTQL---- 123 6799****************************9.79***********99985.... PP AA1.hmm 63 agvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpks..k 115 +vtqcpi++ g sftY+f ++ HsH++ adG+ G+lii++p++ k 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 124 HSVTQCPIPAdGGSFTYTFDLH-------GHSHHQNLMADGINGPLIIHSPRDplK 172 79******989*********98.......6*******************9966444 PP AA1.hmm 116 ekydvddeelvillsdwyhktaeell....ken...atgaepapdsllinGkgrly 164 +++d+d +++v++l+dwyh+t+++++ +e+ t a+p p+s+linG g+ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 173 RHVDFD-QDVVLILADWYHNTSTDIVehmlSEAgyfGTPAAPGPNSALINGIGEW- 226 489998.889***************988883334345666666**********97. PP AA1.hmm 165 ncs...........sklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaD 209 ncs ++ ++++++g + r+rlina+++a++++s+d+H+l+v eaD 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 227 NCSqaskaqqckqiNPPPEFTFKAGDKIRFRLINAGVHAMFFYSVDEHTLNVTEAD 282 563344455554555556************************************** PP AA1.hmm 210 gvyvk.pyevdslqiapGqrydvllkanqsa..gnywiraslds...a....afdn 255 g+ v p ++ + ++ Gqry+v++k+++++ +++++ra++ds a + + 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 283 GTGVYgPPALHRVWLHNGQRYSVVIKTKKEDagKSFYLRATMDSdcwAwvpdD-IQ 337 *99854899*****************98888777******9999766255644.57 PP AA1.hmm 256 ttalailrYkgassas........................................ 271 t+ +ilr +++s+ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 338 LTGFGILRLVDDESKIkkisqsqtrpqtkdwpdeilgdcidlptsslvpilkesvp 393 899******77433325677777889999*************************** PP AA1.hmm 272 ........................................................ 271 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 394 nsvvgsgsfkagfgfqfinntalhltraqavklaqkvnasslslttnprteelqtt 449 *********************99999999999999999999999999988888888 PP AA1.hmm 272 ........................................................ 271 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 450 ndtasflrngtartllnarsksveglwnldesesltalakrqvsvgqknlppgnrt 505 88888888888888888888888777777777777777777777777777777777 PP AA1.hmm 272 .........................nvsf.vepstslleaysgvdetkaklkln.. 299 n+s+ + p ++l+++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 506 nmlgitrtggppptpagtigkfflnNISWtTYPYRPVLHDL------------Tpg 549 77777777777777777777777766666444555665553............033 PP AA1.hmm 300 .................................hp..lhghdfvvv.......... 310 hp lh +d+++v 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 550 gvgavngsnvanviyptsewydlylanidpagsHPyhLHAMDMHIVaegkglptpe 605 333333333333445555666666777888899*************8777777666 PP AA1.hmm 311 .....nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 ++++ ++ +rdt++vp+ + +vir++ad pg w++hchi +H++ G 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 606 nlakvSYNTANPLRRDTIVVPPASFTVIRLRADIPGAWIVHCHIGWHIAAGF 657 55544444777777***********************************997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 202.8 0.1 1.6e-63 1.6e-63 8 280 .. 51 332 .. 46 366 .. 0.85 2 ? -0.3 0.0 0.11 0.11 94 139 .. 626 671 .. 623 682 .. 0.80 Alignments for each domain: == domain 1 score: 202.8 bits; conditional E-value: 1.6e-63 AA1_3.hmm 8 pktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlk 63 ++ +tr+yt++vtest+a DG+ +++l++ngq+Pgp+iea+ GD+le+tv+n+++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 51 TDKPKTRKYTFHVTESTAALDGFLRPVLAINGQIPGPLIEANEGDHLEITVVNQMS 106 56789*************************************************98 PP AA1_3.hmm 64 knGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefratqyGtswYHsHys 118 G ++HwHGi q +t+ +vtqCpi+ g sftY+f + G HsH++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 107 -VGLTLHWHGIYQASTQL----HSVTQCPIPAdGGSFTYTFDLH--G----HSHHQ 151 .8************9985....69******65499******864..5....9**** PP AA1_3.hmm 119 lQyadGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae..... 164 +adG+ Gpl+i+ P + ++d+d+ +l+l+dw+h++ +++ve++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 152 NLMADGINGPLIIHSPrdplkRHVDFDQDV-VLILADWYHNTSTDIVEHMLseagy 206 ***************954433346677665.6789***********9999877765 PP AA1_3.hmm 165 .asggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrlints 213 + ++p ++ Ling +++++s++ ++ + e+++++g k r+rlin++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 207 fGTPAAPGPNSALINGIGEWNCSQAskaqqcKQINPPPEFTFKAGDKIRFRLINAG 262 555667899*************998665444444445569**************** PP AA1_3.hmm 214 vdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe..eeny 266 v+++f +s+d+H+l+v +aD + p + ++++ gqRy v++++++e +++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 263 VHAMFFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRYSVVIKTKKEdaGKSF 318 ***********************9658899******************998899** PP AA1_3.hmm 267 wlraelaeaCskln 280 +lra+++++C ++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 319 YLRATMDSDCWAWV 332 **********9863 PP == domain 2 score: -0.3 bits; conditional E-value: 0.11 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasany 139 +p + ++ + ra+ G H H+ a+G +G ++++ +++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 626 PPASFTVIRLRADIPGAWIVHCHIGWHIAAGFAGVVIVQPDVIKQF 671 5666666788899999999****************99986655555 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.6 0.0 1.1e-57 1.1e-57 2 268 .. 75 356 .. 74 378 .. 0.90 2 ? 0.9 0.0 0.042 0.042 77 106 .. 638 667 .. 624 675 .. 0.83 Alignments for each domain: == domain 1 score: 183.6 bits; conditional E-value: 1.1e-57 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasm 57 r+v+++Ngq P p ie+n+gd++e+++ N++ +lH+HG++q +t+ + 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 75 RPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQASTQL----HS 125 899****************************.8899**********9996....68 PP AA1_2.hmm 58 vtqCpip.pgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeepy... 109 vtqCpip +g ++tY+f++ HsH+++ DG+ gplii+ +++p 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 126 VTQCPIPaDGGSFTYTFDL-------HGHSHHQNLMADGINGPLIIHSPRDPLkrh 174 ******845899*******.......45********************99777677 PP AA1_2.hmm 110 .eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.......... 152 ++d++++l+l+dwYh++s+++v+++ls+ y t a p p+s+l+ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 175 vDFDQDVVLILADWYHNTSTDIVEHMLSEagYFGTPAAPGPNSALIngigewncsq 230 7***************************9666778899****************** PP AA1_2.hmm 153 ........netenatlevepgktYllriinvgafasqylvledhemtivevDGvdv 200 + + ++++++g + ++r+in g+ a+++ ++++h++++ e+DG+ v 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 231 askaqqckQINPPPEFTFKAGDKIRFRLINAGVHAMFFYSVDEHTLNVTEADGTGV 286 ***9998877778899**************************************99 PP AA1_2.hmm 201 e.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetmldvvpddlqlnvts 254 p + + + +QRysv++k+k++ + k++ l a+md++ + vpdd+ql 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 287 YgPPALHRVWLHNGQRYSVVIKTKKEdAGKSFYLRATMDSDCWAWVPDDIQLTGFG 342 72556899***************997366***********************9999 PP AA1_2.hmm 255 tlvydksaalaeas 268 l+ +++++ ++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 343 ILRLVDDESKIKKI 356 98877766665554 PP == domain 2 score: 0.9 bits; conditional E-value: 0.042 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke 106 + G++ +H+H + + G+ g++i++++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 638 DIPGAWIVHCHIGWHIAAGFAGVVIVQPDV 667 5579999*******************9875 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 165.2 0.0 4.1e-52 4.1e-52 3 251 .. 70 326 .. 68 350 .. 0.87 Alignments for each domain: == domain 1 score: 165.2 bits; conditional E-value: 4.1e-52 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkg 58 DGf r + +ng++pgpli +++gd+++i+vvn+ m ++hwhg++q++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 70 LDGFLRPVLAINGQIPGPLIEANEGDHLEITVVNQ-----MSVGLTLHWHGIYQAS 120 6********************************97.....668899*********9 PP AA1_1.hmm 59 tnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqycdglrGalvvy 113 t+ ++vtqCPi + g sf+y+f++++ Hsh+++ + dg+ G+l+++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 121 TQL----HSVTQCPIPAdGGSFTYTFDLHG-------HSHHQNLMADGINGPLIIH 165 987....58******65489*******965.......******************* PP AA1_1.hmm 114 dpedplkslydvddestvitladwyhtaakell............klvavadstli 157 p+dplk+ d+d++ v+ ladwyh++++++ +++ ++s+li 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 166 SPRDPLKRHVDFDQD-VVLILADWYHNTSTDIVehmlseagyfgtPAAPGPNSALI 220 ************976.6899**********99989999999998777799****** PP AA1_1.hmm 158 nGlgryagg...peaelavvn......vekgkrYrfrlvsiscdpnftfsidghnl 204 nG+g ++ + ++++ +n ++g + rfrl++ ++ f +s+d+h+l 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 221 NGIGEWNCSqasKAQQCKQINpppeftFKAGDKIRFRLINAGVHAMFFYSVDEHTL 276 *****9955122333344443222222899************************** PP AA1_1.hmm 205 tvieadgvnt.kpltvdsiqifagqrysvvleanqe..vdnYwiranpnl 251 +v eadg+ + p +++ + gqrysvv+++++e + +++ra++++ 140|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 277 NVTEADGTGVyGPPALHRVWLHNGQRYSVVIKTKKEdaGKSFYLRATMDS 326 *******97636999****************9987621468999998876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (695 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 113.32 // Query: 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 [L=703] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-101 327.8 0.0 4.9e-101 326.9 0.0 1.4 1 AA1.hmm 1.3e-78 252.3 0.0 1e-77 249.4 0.2 2.0 2 AA1_3.hmm 3.3e-73 234.6 0.0 1.3e-71 229.4 0.0 2.9 3 AA1_2.hmm 5.2e-69 220.7 0.1 1.1e-68 219.6 0.1 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 326.9 0.0 4.9e-101 4.9e-101 6 357 .. 66 664 .. 61 665 .. 0.84 Alignments for each domain: == domain 1 score: 326.9 bits; conditional E-value: 4.9e-101 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwh 49 + + r+v+++N+q+PgP+ieanegD++++tV N++ + ++t+Hwh 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 66 TaaldgFLRPVLAINNQIPGPLIEANEGDRLEITVINQM-NISLTMHWH 113 4555557899****************************9.789****** PP AA1.hmm 50 GlrqlgtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvsl 97 Gl q+g+nw+DGv gvtqcpi+p g ++tY+f +++q Gt+wyHsH++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 114 GLYQNGSNWEDGVTGVTQCPIPPnGGTYTYKFDLNGQFGTFWYHSHHQN 162 ***********************9************************* PP AA1.hmm 98 qyadGlrGaliirdpks..kekydvddeelvillsdwyhktaeell... 141 adG+ G++ii++p++ k+ +d+d +++vi+l+dwyh+t+++++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 163 LMADGINGPMIIHSPRDplKRWVDFD-HDVVIMLNDWYHNTSSDIVkrm 210 *************9965443378887.788****************988 PP AA1.hmm 142 ....kenatgaepapdsllinGkgrlync....s.......sklevlkv 175 + t a+p ++s+linG g+ nc ++ ++ + 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 211 lseaGYAGTPAAPGANSALINGVGEW-NCslatRtqrceqvASPPEFII 258 854322255566669*********97.5745540455545544469*** PP AA1.hmm 176 epgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqi 223 +g++ r+rlina+++a++++s+d+H+l++ eaD + + p + ++ + 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 259 AAGEKIRFRLINAGVHAMFFYSVDEHTLNITEADSTGIYgPSDFRQIWL 307 ***********************************998549******** PP AA1.hmm 224 apGqrydvllkanqsa..gnywiraslds...a....afdnttalailr 263 + Gqry+v++++++++ ++ ++ra++ds + + + ta +ilr 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 308 HNGQRYSVIVQTKKEDagKSIYMRATMDSdcwSwvpnD-IQDTAFGILR 355 ***********98888777******9999766255534.68899***** PP AA1.hmm 264 Ykgassas......................................... 271 ++++ + 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 356 LVDDENRPgnvsiarpttrawpqefpeecldinprmmvpilkrsvpstv 404 *88776668889999999999999999********************** PP AA1.hmm 272 ................................................. 271 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 405 vgsgsfeagfgfqlinntekrvtraqaarlaeelnldwtrdrnqrakkk 453 **********************************999999999999999 PP AA1.hmm 272 ................................................. 271 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 454 fatpreddentnrnwpvartvrwrkakrvsaesswlqsgsvkrqveips 502 9999999999999999999999999999999999999999999999999 PP AA1.hmm 272 ...................................nvsf.vepstslle 284 nvs+ + p +++l+ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 503 qisapfgirtnssgvtrlagppptpvgtigkyfinNVSWsTFPYQPVLH 551 9999999999999999999999999999999999888887778888888 PP AA1.hmm 285 ay..sgv......detka...........klkln..........hp..l 302 ++ gv + hp l 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 552 DLtiGGVgsinssR---VaniiyptaewyD---LylvnvdatgsHPyhL 594 84343345443320...2334444334441...04445556677***** PP AA1.hmm 303 hghdfvvv...............nfdaedeakrdtvavpkggwvvirfv 336 h +d+++v +++++++ +rdtv+vp+ + v++r++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 595 HAMDMHIVafgrgfptaerlkqvEYNTDNPLRRDTVVVPPASFVIVRLN 643 ********777777766655555555888888***************** PP AA1.hmm 337 adnpgvwllhchieaHlsmGl 357 ad pg w++hchi +H++ G 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 644 ADIPGAWIMHCHIGWHIAGGF 664 *****************9997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 249.4 0.2 1e-77 1e-77 9 296 .. 51 360 .. 45 380 .. 0.87 2 ? -0.0 0.0 0.089 0.089 96 155 .. 635 694 .. 630 699 .. 0.78 Alignments for each domain: == domain 1 score: 249.4 bits; conditional E-value: 1e-77 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevt 57 + +tr+ytl+vte+t+a DG+ +++l++n+q+Pgp+iea+ GD+le+t 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 51 AEPTTRRYTLTVTETTAALDGFLRPVLAINNQIPGPLIEANEGDRLEIT 99 45689******************************************** PP AA1_3.hmm 58 vknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefra 105 v n+++ ++HwHG+ q+ +n++DGv+gvtqCpi+p g ++tY+f 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 100 VINQMN-ISLTMHWHGLYQNGSNWEDGVTGVTQCPIPPnGGTYTYKFDL 147 ****98.5788**************************9678******97 PP AA1_3.hmm 106 t.qyGtswYHsHyslQyadGvlGplvinGPas.....anydvdlgplll 148 + q+Gt wYHsH++ +adG+ Gp++i+ P ++d+d+ +++l 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 148 NgQFGTFWYHSHHQNLMADGINGPMIIHSPRDplkrwVDFDHDV-VIML 195 55***************************964332225777775.6899 PP AA1_3.hmm 149 tdwshesafelveeae......asggppvadniLingknkvkkskk... 188 +dw+h++ +++v+++ + ++p a++ Ling +++++s + 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 196 NDWYHNTSSDIVKRMLseagyaGTPAAPGANSALINGVGEWNCSLAtrt 244 ***********9999877765445556899*************988777 PP AA1_3.hmm 189 ...eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDf 234 e+ ++ e+ + +g+k r+rlin++v+++f +s+d+H+l++ +aD 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 245 qrcEQVASPPEFIIAAGEKIRFRLINAGVHAMFFYSVDEHTLNITEADS 293 7766677777899************************************ PP AA1_3.hmm 235 vpie.pyttdslligigqRydviveanqe..eenywlraelaeaCskl. 279 i p + +++++ gqRy viv++++e ++ ++ra+++++C ++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 294 TGIYgPSDFRQIWLHNGQRYSVIVQTKKEdaGKSIYMRATMDSDCWSWv 342 ***659999******************9988999***********9974 PP AA1_3.hmm 280 .naeekeikailrYeeas 296 n+ ++++ +ilr +++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 343 pNDIQDTAFGILRLVDDE 360 456777778888765554 PP == domain 2 score: -0.0 bits; conditional E-value: 0.089 AA1_3.hmm 96 gesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydvdlg 144 + + + +a+ G H H+ a G +G +v++ a + + + + 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 635 ASFVIVRLNADIPGAWIMHCHIGWHIAGGFAGIVVVQPEAISRFVIPEE 683 555556677777899999***************9999888888887777 PP AA1_3.hmm 145 pllltdwshes 155 ++ l d +e 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 684 NMALCDLRTEP 694 77777776665 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 229.4 0.0 1.3e-71 1.3e-71 2 264 .. 74 362 .. 73 384 .. 0.92 2 ? -0.1 0.0 0.084 0.084 153 194 .. 562 603 .. 535 613 .. 0.82 3 ? 0.5 0.0 0.056 0.056 77 106 .. 645 674 .. 630 693 .. 0.81 Alignments for each domain: == domain 1 score: 229.4 bits; conditional E-value: 1.3e-71 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtn 50 r+v+++N+q P p ie+n+gdr+e+++ N++ + + ++H+HGl+qng+n 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 74 RPVLAINNQIPGPLIEANEGDRLEITVINQM-NISLTMHWHGLYQNGSN 121 899****************************.8999************* PP AA1_2.hmm 51 amDGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrg 98 + DG+++vtqCpipp g t+tY+f+++ q Gt+WyHsH+++ DG+ g 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 122 WEDGVTGVTQCPIPPnGGTYTYKFDLNGQFGTFWYHSHHQNLMADGING 170 *************984689****************************** PP AA1_2.hmm 99 pliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynpt 141 p+ii+ +++p ++d++++++l dwYh++s+++vk++ls+ y t 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 171 PMIIHSPRDPLkrwvDFDHDVVIMLNDWYHNTSSDIVKRMLSEagYAGT 219 ********98888889**************************9566677 PP AA1_2.hmm 142 gaepipdsllv..................netenatlevepgktYllri 172 a p +s+l+ + + ++ + +g++ ++r+ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 220 PAAPGANSALIngvgewncslatrtqrceQVASPPEFIIAAGEKIRFRL 268 78888899999**************9988778888999*********** PP AA1_2.hmm 173 invgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLv 220 in g+ a+++ ++++h+++i e+D++ + ps ++ + +QRysv+v 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 269 INAGVHAMFFYSVDEHTLNITEADSTGIYgPSDFRQIWLHNGQRYSVIV 317 *************************98853889**************** PP AA1_2.hmm 221 kaknd.tsknyalvakmdetmldvvpddlqlnvtstlvydksaal 264 ++k++ + k+ + a+md++ + vp+d+q + l+ ++++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 318 QTKKEdAGKSIYMRATMDSDCWSWVPNDIQDTAFGILRLVDDENR 362 **9973669********************9988887776655555 PP == domain 2 score: -0.1 bits; conditional E-value: 0.084 AA1_2.hmm 153 netenatlevepgktYllriinvgafasqylvledhemtive 194 n+++ a++ + + Y l ++nv a s+ +l +m+iv 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 562 NSSRVANIIYPTAEWYDLYLVNVDATGSHPYHLHAMDMHIVA 603 666666677777788999999999999999999999999986 PP == domain 3 score: 0.5 bits; conditional E-value: 0.056 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke 106 + G++ +H+H + + G+ g ++++++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 645 DIPGAWIMHCHIGWHIAGGFAGIVVVQPEA 674 5579999*******************9976 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 219.6 0.1 1.1e-68 1.1e-68 3 253 .. 69 338 .. 67 369 .. 0.86 Alignments for each domain: == domain 1 score: 219.6 bits; conditional E-value: 1.1e-68 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihw 51 DGf r + +n+++pgpli +++gd+++i+v+n+ m+ s ++hw 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 69 LDGFLRPVLAINNQIPGPLIEANEGDRLEITVINQ-----MNISLTMHW 112 6********************************97.....678999*** PP AA1_1.hmm 52 hglfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshls 99 hgl+q+g+nw+dg++ vtqCPi p g +++y+f++++q GtfwYHsh++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 113 HGLYQNGSNWEDGVTGVTQCPIPPnGGTYTYKFDLNGQFGTFWYHSHHQ 161 **********************994579********************* PP AA1_1.hmm 100 tqycdglrGalvvydpedplkslydvddestvitladwyhtaakell.. 146 + + dg+ G+++++ p+dplk+ d+d++ vi+l dwyh++++++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 162 NLMADGINGPMIIHSPRDPLKRWVDFDHD-VVIMLNDWYHNTSSDIVkr 209 **************************986.799***********99989 PP AA1_1.hmm 147 ..........klvavadstlinGlgryagg.........peaelavvnv 176 +++ a+s+linG+g ++ + + a+ + 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 210 mlseagyagtPAAPGANSALINGVGEWNCSlatrtqrceQVASPPEFII 258 999999987767799***********99542222222222222234568 PP AA1_1.hmm 177 ekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqi 224 ++g++ rfrl++ ++ f +s+d+h+l++ ead++ + p + +i + 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 259 AAGEKIRFRLINAGVHAMFFYSVDEHTLNITEADSTGIyGPSDFRQIWL 307 99*********************************976379******** PP AA1_1.hmm 225 fagqrysvvleanqevd..nYwiranpnlgk 253 gqrysv++++++e + ++ra++++ 10767|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 308 HNGQRYSVIVQTKKEDAgkSIYMRATMDSDC 338 ***********98875422677888877655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (703 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.01s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 75.19 // Query: 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 [L=592] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.4e-80 258.8 0.0 2.9e-80 258.5 0.0 1.1 1 AA1.hmm 2.1e-66 212.3 0.0 3.5e-66 211.5 0.0 1.3 1 AA1_3.hmm 2.4e-61 195.6 0.0 3.5e-61 195.1 0.0 1.2 1 AA1_2.hmm 1.2e-59 189.9 0.0 1.8e-59 189.3 0.0 1.2 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 258.5 0.0 2.9e-80 2.9e-80 6 345 .. 62 592 .] 57 592 .] 0.80 Alignments for each domain: == domain 1 score: 258.5 bits; conditional E-value: 2.9e-80 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrql 54 + + r+v+++N+q+PgP+ieanegD +++tV N+l + ++tiHwhGl q+ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 62 TagpdgFWRTVLAINNQIPGPLIEANEGDSLEITVINHL-DSPVTIHWHGLYQN 114 4555557899****************************9.68************ PP AA1.hmm 55 gtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGal 107 gtnw+DGv gvtqcpi+ g + Y+ft+t H+H++ adG+ G+l 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 115 GTNWEDGVTGVTQCPIPGsGGMYIYKFTLT-------GHAHHQNLMADGISGPL 161 ****************87899********9.......6**************** PP AA1.hmm 108 iirdpks..kekydvddeelvillsdwyhktaeell......ken.atgaepap 152 ii++p++ k+ d+d e++v++l+dwyh+t+++++ ++ +t a+p p 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 162 IIHSPRDplKRGIDFD-EDIVLMLTDWYHNTSSQIVehmlsePGYfHTPAAPSP 214 ***9965444489988.999***************988886533367888899* PP AA1.hmm 153 dsllinGkgrlync......s....sklevlkvepgktyrlrlinaalnaeltf 196 +s+l+nG g+ +c + ++ +++v +g + r+rl+na+++a+++ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 215 NSALVNGVGEW-DCrwatttQrcekTSPPEFRVLAGHRVRFRLVNAGAHAMFYW 267 *********96.565665541454455569************************ PP AA1.hmm 197 sidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywiras 247 s d+H+l+v eaD + v p +++ ++ + Gqry+v++k ++++ +++++r + 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 268 SADEHTLNVTEADSTAVYgPSDIHRIKFHNGQRYSVIVKIDSKEagSSFYLRGT 321 **************998549*******************77777656******9 PP AA1.hmm 248 lds...a....afdnttalailrYkgassas....................... 271 +ds a + ++talai+r +++ s 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 322 MDSdcwAwvagD-LQRTALAIVRVVESRLDSprkgtrpttkdwsdqldgvcqdl 374 999776255555.57899*****9774433356667777888999999999999 PP AA1.hmm 272 ...................................................... 271 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 375 dpnllspilpvnvprtvagsrtlanafgfevistgafiprggnssnispaspaq 428 9999999999*99999**************************888666666666 PP AA1.hmm 272 ................................................nvsf.v 276 v++ + 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 429 arirrqievgksekrpalgtstvpppftriggppptpagarglfyvdnPVTWkT 482 666666666666666666666666666666666666666666666665455544 PP AA1.hmm 277 epstslleaysgvdetkaklkln............................... 299 p +++l+++ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 483 FPYQPILHDL------------Tpggtgfidstrvanvvypsadwydlilvnld 524 5555555553............03333333333333334556666666777777 PP AA1.hmm 300 ....hp..lhghdfvvv.........nfd........aedeakrdtvavpkggw 330 hp lh +d+++v + +e++ +rdtv++++ + 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 525 palsHPyhLHAMDMHLVafgkglppnV-EnlrnltyrIENPLRRDTVVIEPASF 577 8888*************6666666640.144445555777777*********** PP AA1.hmm 331 vvirfvadnpgvwll 345 +++r+ +d pg+w++ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 578 AIVRILTDIPGIWIM 592 *************98 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 211.5 0.0 3.5e-66 3.5e-66 5 300 .. 43 352 .. 39 364 .. 0.85 Alignments for each domain: == domain 1 score: 211.5 bits; conditional E-value: 3.5e-66 AA1_3.hmm 5 ekvpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtv 58 +++ + r+y+l +t++t+ pDG+ +++l++n+q+Pgp+iea+ GD+le+tv 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 43 FEINARASLRRYELVITNTTAGPDGFWRTVLAINNQIPGPLIEANEGDSLEITV 96 556677899********************************************* PP AA1_3.hmm 59 knnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefratqyGts 111 n+l+ ++iHwHG+ q+ tn++DGv+gvtqCpi+ g ++ Y+f+ t G 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 97 INHLD-SPVTIHWHGLYQNGTNWEDGVTGVTQCPIPGsGGMYIYKFTLT--G-- 145 ****8.5688*************************63255666666555..5.. PP AA1_3.hmm 112 wYHsHyslQyadGvlGplvinGPas.....anydvdlgpllltdwshesafelv 160 H+H++ +adG+ Gpl+i+ P ++d+d+ +l+ltdw+h++ +++v 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 146 --HAHHQNLMADGISGPLIIHSPRDplkrgIDFDEDI-VLMLTDWYHNTSSQIV 196 ..9*******************964222226788885.789************* PP AA1_3.hmm 161 eeae......asggppvadniLingknkvkkskk.....eeegeysevklekgk 203 e++ ++ ++p+ ++ L+ng ++++++ + e+++ e+++ +g+ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 197 EHMLsepgyfHTPAAPSPNSALVNGVGEWDCRWAtttqrCEKTSPPEFRVLAGH 250 *99988998888889****************887665544455666799***** PP AA1_3.hmm 204 kyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydvi 256 + r+rl+n++++++f s d+H+l+v +aD ++ p + + + + gqRy vi 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 251 RVRFRLVNAGAHAMFYWSADEHTLNVTEADSTAVYgPSDIHRIKFHNGQRYSVI 304 **********************************65999*************** PP AA1_3.hmm 257 veanqe..eenywlraelaeaCskln..aeekeikailrYeeassaep 300 v+ +++ ++++lr +++++C ++ + ++++ ai+r e++ ++p 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 305 VKIDSKeaGSSFYLRGTMDSDCWAWVagDLQRTALAIVRVVESRLDSP 352 *999887799************99752345556667777666655555 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 195.1 0.0 3.5e-61 3.5e-61 2 261 .. 70 347 .. 69 382 .. 0.91 Alignments for each domain: == domain 1 score: 195.1 bits; conditional E-value: 3.5e-61 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGa 55 r+v+++N+q P p ie+n+gd++e+++ N+l d+++++H+HGl+qngtn+ DG+ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 70 RTVLAINNQIPGPLIEANEGDSLEITVINHL-DSPVTIHWHGLYQNGTNWEDGV 122 899****************************.99******************** PP AA1_2.hmm 56 smvtqCpip.pgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeep 108 ++vtqCpip g ++Y+ft+ +G H+H+++ DG+ gplii+ +++p 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 123 TGVTQCPIPgSGGMYIYKFTL---TG----HAHHQNLMADGISGPLIIHSPRDP 169 ********94577889**999...55....**********************99 PP AA1_2.hmm 109 y....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.... 152 ++de+++l+l+dwYh++s+++v+++ls+ y t a p p+s+lv 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 170 LkrgiDFDEDIVLMLTDWYHNTSSQIVEHMLSEpgYFHTPAAPSPNSALVngvg 223 88888***************************989999**************** PP AA1_2.hmm 153 .............netenatlevepgktYllriinvgafasqylvledhemtiv 193 ++t+ +++v +g++ ++r++n ga a++y + ++h++++ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 224 ewdcrwatttqrcEKTSPPEFRVLAGHRVRFRLVNAGAHAMFYWSADEHTLNVT 277 ***********99999999*********************************** PP AA1_2.hmm 194 evDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetmldvvp 245 e+D+++v ps ++ ++ +QRysv+vk ++ + +++ l +md++ + v+ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 278 EADSTAVYgPSDIHRIKFHNGQRYSVIVKIDSKeAGSSFYLRGTMDSDCWAWVA 331 *****9963888*****************99873669***************** PP AA1_2.hmm 246 ddlqlnvtstlvydks 261 dlq + + ++ +s 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 332 GDLQRTALAIVRVVES 347 ***9998887765443 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 189.3 0.0 1.8e-59 1.8e-59 3 280 .. 65 356 .. 63 374 .. 0.85 Alignments for each domain: == domain 1 score: 189.3 bits; conditional E-value: 1.8e-59 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfq 56 pDGf r++ +n+++pgpli +++gd+++i+v+n+L+ + +ihwhgl+q 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 65 PDGFWRTVLAINNQIPGPLIEANEGDSLEITVINHLDSP-----VTIHWHGLYQ 113 9**********************************9865.....79******** PP AA1_1.hmm 57 kgtnwadgpafvtqCPia.pgnsflydfkvpdqaGtfwYHshlstqycdglrGa 109 +gtnw+dg++ vtqCPi +g + y+f++++ H+h+++ + dg+ G+ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 114 NGTNWEDGVTGVTQCPIPgSGGMYIYKFTLTG-------HAHHQNLMADGISGP 160 *****************835899*****9954.......99************* PP AA1_1.hmm 110 lvvydpedplkslydvddestvitladwyhtaakell............klvav 151 l+++ p+dplk+ d+d+ + v++l+dwyh++++++ +++ 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 161 LIIHSPRDPLKRGIDFDE-DIVLMLTDWYHNTSSQIVehmlsepgyfhtPAAPS 213 ****************85.689************99999999999997777799 PP AA1_1.hmm 152 adstlinGlgrya....gg....peaelavvnvekgkrYrfrlvsiscdpnftf 197 ++s+l+nG+g + ++ ++++ +v +g+r rfrlv+ +++ f + 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 214 PNSALVNGVGEWDcrwaTTtqrcEKTSPPEFRVLAGHRVRFRLVNAGAHAMFYW 267 **********7763332333333444556799********************** PP AA1_1.hmm 198 sidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqev..dnYwiran 248 s d+h+l+v ead++ + p ++++i+ gqrysv+++ + + + +++r + 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 268 SADEHTLNVTEADSTAVyGPSDIHRIKFHNGQRYSVIVKIDSKEagSSFYLRGT 321 *************9986379******************9886541168999999 PP AA1_1.hmm 249 pnlgk...ntgfegginsailrykgapeaePttkq 280 +++ +g + + ai+r ++ P++ + 66288|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 322 MDSDCwawVAGDLQRTALAIVRVVESRLDSPRKGT 356 99888544445555566788888887777777655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (592 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 114.47 // Query: WAR60204.1|AA1 [L=137] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.1e-23 69.8 0.0 6.4e-23 69.4 0.0 1.1 1 AA1_3.hmm 2.7e-20 61.3 0.0 3.7e-20 60.8 0.0 1.1 1 AA1.hmm 8.8e-15 42.5 0.0 1.3e-14 42.0 0.0 1.2 1 AA1_2.hmm 1e-14 42.4 0.0 1.4e-14 41.9 0.0 1.2 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 69.4 0.0 6.4e-23 6.4e-23 11 79 .. 55 122 .. 47 125 .. 0.92 Alignments for each domain: == domain 1 score: 69.4 bits; conditional E-value: 6.4e-23 AA1_3.hmm 11 gvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqlnt 79 +tr+y+l+vte+t+a DG+ +++l++ngq+Pgp+iea+ GD+le+tv+n+++ ++HwHG+ q ++ WAR60204.1|AA1 55 PTTRRYNLTVTETTAALDGFLRPVLAINGQIPGPLIEANEGDRLEITVNNQMN-ISLTMHWHGLYQASE 122 579***********************************************997.6789******99865 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 60.8 0.0 3.7e-20 3.7e-20 5 56 .. 67 122 .. 63 125 .. 0.87 Alignments for each domain: == domain 1 score: 60.8 bits; conditional E-value: 3.7e-20 AA1.hmm 5 ek.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgt 56 ++ + r+v+++Ngq+PgP+ieanegD++++tV+N++ + ++t+HwhGl q + WAR60204.1|AA1 67 TTaaldgFLRPVLAINGQIPGPLIEANEGDRLEITVNNQM-NISLTMHWHGLYQASE 122 5555566789*****************************9.789*********9765 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.0 0.0 1.3e-14 1.3e-14 2 49 .. 76 122 .. 75 127 .. 0.94 Alignments for each domain: == domain 1 score: 42.0 bits; conditional E-value: 1.3e-14 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngt 49 r+v+++Ngq P p ie+n+gdr+e++++N++ + + ++H+HGl+q ++ WAR60204.1|AA1 76 RPVLAINGQIPGPLIEANEGDRLEITVNNQM-NISLTMHWHGLYQASE 122 89*****************************.8999*********876 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.9 0.0 1.4e-14 1.4e-14 3 60 .. 71 123 .. 69 129 .. 0.91 Alignments for each domain: == domain 1 score: 41.9 bits; conditional E-value: 1.4e-14 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqkgtn 60 DGf r + +ng++pgpli +++gd+++i+v+n+ m+ s ++hwhgl+q++++ WAR60204.1|AA1 71 LDGFLRPVLAINGQIPGPLIEANEGDRLEITVNNQ-----MNISLTMHWHGLYQASET 123 6*******************************886.....67899*********8765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (137 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 133.52 // Query: 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 [L=153] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.5e-29 88.7 0.1 1e-28 88.4 0.1 1.1 1 AA1_3.hmm 1.4e-25 78.7 0.1 1.6e-25 78.5 0.1 1.2 1 AA1.hmm 7.2e-18 52.7 0.0 9.3e-18 52.4 0.0 1.2 1 AA1_1.hmm 1.5e-17 51.7 0.1 1.8e-17 51.4 0.1 1.2 1 AA1_2.hmm Domain annotation for each model (and alignments): >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 88.4 0.1 1e-28 1e-28 8 103 .. 51 148 .. 46 151 .. 0.86 Alignments for each domain: == domain 1 score: 88.4 bits; conditional E-value: 1e-28 AA1_3.hmm 8 pktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevt 57 ++ +tr+yt++vtest+a DG+ +++l++ngq+Pgp+iea+ GD+le+t 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 51 TDKPKTRKYTFHVTESTAALDGFLRPVLAINGQIPGPLIEANEGDHLEIT 100 56789********************************************* PP AA1_3.hmm 58 vknnlkknGtsiHwHGirqlntneqDGv...pgvtqCpiapgesftYef 103 v+n+++ G ++HwHGi q+ tn++DGv p+ + C +++ ++f 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 101 VVNQMS-VGLTLHWHGIYQNGTNWEDGVteyPSFSRCYPMSHSCRWWKF 148 ****98.8*******************9444466777555555555555 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 78.5 0.1 1.6e-25 1.6e-25 6 66 .. 67 128 .. 55 150 .. 0.88 Alignments for each domain: == domain 1 score: 78.5 bits; conditional E-value: 1.6e-25 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhG 50 + + r+v+++Ngq+PgP+ieanegD++++tV+N++ s g+t+HwhG 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 67 TaaldgFLRPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHG 115 4445557799****************************9.79******** PP AA1.hmm 51 lrqlgtnwaDGvagvt 66 + q+gtnw+DGv t 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 116 IYQNGTNWEDGV---T 128 ***********8...4 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 52.4 0.0 9.3e-18 9.3e-18 3 66 .. 70 128 .. 68 149 .. 0.91 Alignments for each domain: == domain 1 score: 52.4 bits; conditional E-value: 9.3e-18 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwh 52 DGf r + +ng++pgpli +++gd+++i+vvn+ m ++hwh 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 70 LDGFLRPVLAINGQIPGPLIEANEGDHLEITVVNQ-----MSVGLTLHWH 114 6********************************97.....668899**** PP AA1_1.hmm 53 glfqkgtnwadgpa 66 g++q+gtnw+dg++ 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 115 GIYQNGTNWEDGVT 128 ************86 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 51.4 0.1 1.8e-17 1.8e-17 2 56 .. 75 128 .. 74 150 .. 0.92 Alignments for each domain: == domain 1 score: 51.4 bits; conditional E-value: 1.8e-17 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtna 51 r+v+++Ngq P p ie+n+gd++e+++ N++ +lH+HG++qngtn+ 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 75 RPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQNGTNW 123 89*****************************.8899************** PP AA1_2.hmm 52 mDGas 56 DG++ 6811|Pgt_Ug99_C1_GeneCatalog_proteins_20191003.aa.fasta|AA1 124 EDGVT 128 ***86 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (153 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 127.79 // Query: 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 [L=681] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.7e-84 270.5 0.4 8.7e-84 270.1 0.4 1.1 1 AA1.hmm 1.5e-60 193.1 3.0 2.9e-60 192.1 3.0 1.4 1 AA1_3.hmm 1.6e-59 189.7 0.4 9.1e-58 183.9 0.7 2.8 3 AA1_2.hmm 2.7e-50 159.2 0.4 4.4e-50 158.5 0.4 1.3 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 270.1 0.4 8.7e-84 8.7e-84 7 357 .. 76 622 .. 65 623 .. 0.85 Alignments for each domain: == domain 1 score: 270.1 bits; conditional E-value: 8.7e-84 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrql 54 + ++v+++N+q+PgP+ie+negD++++tV+N++ s g+tiHwhG+ q+ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 76 YFKPVLAINNQIPGPLIEVNEGDQLEITVVNRM-SLGLTIHWHGIYQN 122 56899***************************9.79***********9 PP AA1.hmm 55 gtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyad 101 gt+ +tqcpi+p g ++tY+f++t H+H + ad 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 123 GTKL-----RITQCPIPPhGGQYTYKFKIT-------EHAHQQNFMAD 158 9975.....6********9**********9.......7********** PP AA1.hmm 102 GlrGaliirdpks..kekydvddeelvillsdwyhktaeell...... 141 G+ G++i+++ ++ k+++d+d +e+v++l+dwyh+t+e+++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 159 GISGPFIVHSIRDplKRSVDFD-QEVVLFLADWYHNTSETIVhnmlte 205 *********7422224489999.899****************999864 PP AA1.hmm 142 ken..atgaepapdsllinGkgrlync.....s.....skle.vlkve 176 k t a+p p+s+linG g+ nc s +k + ++++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 206 K-GyyGTPAAPSPNSALINGVGNW-NCdkatsSekcvqKKSHiQFNFV 251 2.2357778888**********97.5655554155554332359**** PP AA1.hmm 177 pgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqi 223 +g+t r+rlin a++a++++s+d+H+l+v eaD++ v p +++ ++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 252 AGETIRFRLINGASHAMFYYSVDEHTLNVTEADATGVYgPSNIHRIKF 299 **********************************998549******** PP AA1.hmm 224 apGqrydvllkanqsa..gnywiraslds...a...afdnttalailr 263 + Gqry+v++k+n+++ +n+ +ra++ds a + + tal+i++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 300 HNGQRYSVMIKTNKKDagKNFFMRAQMDSdcwAwvaNDAELTALGIIN 347 ***********99999877******999977625554478899***** PP AA1.hmm 264 Ykgassas........................................ 271 + s+++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 348 LIDGSEKHhtsveledslprtidwkdemggecadlnssslkpilpsrv 395 9664444457899999999***************************** PP AA1.hmm 272 ................................................ 271 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 396 pkvavgtgtlanafgfqviltgelvprgaastpsnatfangqnpssng 443 ************************************************ PP AA1.hmm 272 ................................................ 271 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 444 ssprrlvkkqvqigdddgsnipngksseqagisriggppptpvgtigk 491 *********************************************999 PP AA1.hmm 272 ....nvsf.vepstslleay..sgv...detka....klkln...... 299 n+++ + p +++l+++ sg ++t+ + 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 492 ffvnNITWlTAPYQPILHDLigSGAgevNQTRVssvtF---Htpewyd 536 99999999778888999885362224455555564440...2444555 PP AA1.hmm 300 ...........hp..lhghdfvvv............nfdaedeak... 319 hp lh +d+++v + k 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 537 lhivnldpalsHPyhLHAMDMHLVaqgkgvpnketlS-------Kley 577 55556777788*************7666555433330.......1444 PP AA1.hmm 320 .......rdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 rdt+++++ + +v+r+ +d pgvw+lhchi +Hl+ G 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 578 dtinplrRDTIVIEPASFAVVRILTDIPGVWILHCHIGWHLAGGF 622 4455555**********************************9996 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 192.1 3.0 2.9e-60 2.9e-60 9 291 .. 55 347 .. 50 364 .. 0.88 Alignments for each domain: == domain 1 score: 192.1 bits; conditional E-value: 2.9e-60 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlev 56 + +v r y++ vt++t+a DG+ k++l++n+q+Pgp+ie + GD+le+ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 55 DVSVKRVYKFIVTNTTAALDGYFKPVLAINNQIPGPLIEVNEGDQLEI 102 67899******************************************* PP AA1_3.hmm 57 tvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYef 103 tv+n+++ G +iHwHGi q+ t+ +tqCpi+p g ++tY+f 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 103 TVVNRMS-LGLTIHWHGIYQNGTKL-----RITQCPIPPhGGQYTYKF 144 *****98.8************9996.....5******99789****** PP AA1_3.hmm 104 ratqyGtswYHsHyslQyadGvlGplvinG...Pasanydvdlg.pll 147 ++t+ H+H + +adG+ Gp +++ P + + d d + +l+ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 145 KITE------HAHQQNFMADGISGPFIVHSirdPLKRSVDFDQEvVLF 186 **99......99**************9875444877777777751578 PP AA1_3.hmm 148 ltdwshesafelveeae......asggppvadniLingknkvkkskk. 188 l+dw+h++ +++v+++ + ++p+ ++ Ling ++++++k+ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 187 LADWYHNTSETIVHNMLtekgyyGTPAAPSPNSALINGVGNWNCDKAt 234 9*************99976665545566999*************9989 PP AA1_3.hmm 189 .....eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltvia 231 ++++ ++++ +g++ r+rlin +++++f +s+d+H+l+v + 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 235 ssekcVQKKSHIQFNFVAGETIRFRLINGASHAMFYYSVDEHTLNVTE 282 9999888999999*********************************** PP AA1_3.hmm 232 aDfvpie.pyttdslligigqRydviveanqe..eenywlraelaeaC 276 aD + p + + + + gqRy v++++n++ +n+++ra+++++C 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 283 ADATGVYgPSNIHRIKFHNGQRYSVMIKTNKKdaGKNFFMRAQMDSDC 330 *****9659999*******************99999************ PP AA1_3.hmm 277 skl..naeekeikailr 291 ++ n+ e ++ +i++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 331 WAWvaNDAELTALGIIN 347 99822344444555655 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.9 0.7 9.1e-58 9.1e-58 2 262 .. 78 352 .. 77 375 .. 0.90 2 ? 1.3 0.0 0.032 0.032 152 194 .. 519 561 .. 472 578 .. 0.83 3 ? -0.5 0.0 0.11 0.11 79 111 .. 605 637 .. 590 643 .. 0.84 Alignments for each domain: == domain 1 score: 183.9 bits; conditional E-value: 9.1e-58 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngt 49 ++v+++N+q P p ievn+gd++e+++ N++ ++H+HG++qngt 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 78 KPVLAINNQIPGPLIEVNEGDQLEITVVNRM-SLGLTIHWHGIYQNGT 124 6899***************************.7899***********9 PP AA1_2.hmm 50 namDGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGl 96 + +tqCpipp g ++tY+f+++ H+H+++ DG+ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 125 KL-----RITQCPIPPhGGQYTYKFKIT-------EHAHQQNFMADGI 160 85.....7******984689*******3.......5************ PP AA1_2.hmm 97 rgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..y 138 gp+i++ ++p ++d+e++l l+dwYh++s+++v+++l++ y 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 161 SGPFIVHSIRDPLkrsvDFDQEVVLFLADWYHNTSETIVHNMLTEkgY 208 *******9887776777************************9999566 PP AA1_2.hmm 139 nptgaepipdsllv..................netenatlevepgktY 168 t a p p+s+l+ ++++++++++ +g+t 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 209 YGTPAAPSPNSALIngvgnwncdkatssekcvQKKSHIQFNFVAGETI 256 778899**************************99************** PP AA1_2.hmm 169 llriinvgafasqylvledhemtivevDGvdve.psevdslyiavaQR 215 ++r+in + a++y ++++h++++ e+D++ v ps+++ ++ +QR 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 257 RFRLINGASHAMFYYSVDEHTLNVTEADATGVYgPSNIHRIKFHNGQR 304 *****************************99853899*********** PP AA1_2.hmm 216 ysvLvkaknd.tsknyalvakmdetmldvvpddlqlnvtstlvydksa 262 ysv++k++++ + kn+ + a+md++ + v++d +l + ++ + 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 305 YSVMIKTNKKdAGKNFFMRAQMDSDCWAWVANDAELTALGIINLIDGS 352 ******9886377******************99999988877654444 PP == domain 2 score: 1.3 bits; conditional E-value: 0.032 AA1_2.hmm 152 vnetenatlevepgktYllriinvgafasqylvledhemtive 194 vn+t+ ++++++ + Y l+i+n+ s+ +l +m++v 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 519 VNQTRVSSVTFHTPEWYDLHIVNLDPALSHPYHLHAMDMHLVA 561 5999999999*************99999999999999998875 PP == domain 3 score: -0.5 bits; conditional E-value: 0.11 AA1_2.hmm 79 vGtYWyHsHskgqYeDGlrgpliiedkeepyey 111 G + +H+H + + G+ +++++++++ + e+ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 605 PGVWILHCHIGWHLAGGFASVVVVQPERIKSEF 637 688889*******************99866655 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 158.5 0.4 4.4e-50 4.4e-50 3 253 .. 73 330 .. 71 358 .. 0.88 Alignments for each domain: == domain 1 score: 158.5 bits; conditional E-value: 4.4e-50 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsih 50 DG+ + + +n+++pgpli ++gd+++i+vvn+ m +ih 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 73 LDGYFKPVLAINNQIPGPLIEVNEGDQLEITVVNR-----MSLGLTIH 115 6********************************96.....678999** PP AA1_1.hmm 51 whglfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHsh 97 whg++q+gt+ +tqCPi p g +++y+fk+++ H+h 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 116 WHGIYQNGTKL-----RITQCPIPPhGGQYTYKFKITE-------HAH 151 ********986.....6******996789*******77.......89* PP AA1_1.hmm 98 lstqycdglrGalvvydpedplkslydvddestvitladwyhtaakel 145 ++ + dg+ G+++v+ +dplk+ d+d+e v+ ladwyh++++++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 152 QQNFMADGISGPFIVHSIRDPLKRSVDFDQE-VVLFLADWYHNTSETI 198 ****************************987.699***********99 PP AA1_1.hmm 146 l............klvavadstlinGlgryagg.........peaela 172 +++ ++s+linG+g ++ + ++++ + 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 199 VhnmltekgyygtPAAPSPNSALINGVGNWNCDkatssekcvQKKSHI 246 989999999997777799************966444444444444566 PP AA1_1.hmm 173 vvnvekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltv 219 n +g+ rfrl++ ++++ f +s+d+h+l+v ead++ + p ++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 247 QFNFVAGETIRFRLINGASHAMFYYSVDEHTLNVTEADATGVyGPSNI 294 67889999******************************997637**** PP AA1_1.hmm 220 dsiqifagqrysvvleanqev..dnYwiranpnlgk 253 ++i+ gqrysv++++n++ +n+++ra++++ 3119380|PhapaK8108_GeneCatalog_proteins_20210126.aa.fasta|AA1 295 HRIKFHNGQRYSVMIKTNKKDagKNFFMRAQMDSDC 330 ******************975226*******98765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (681 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 139.84 // Query: 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 [L=646] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.8e-86 277.9 0.1 5.9e-86 277.3 0.1 1.2 1 AA1.hmm 7.1e-73 233.5 0.7 1.2e-72 232.8 0.7 1.3 1 AA1_3.hmm 3.3e-62 198.5 0.1 1.3e-61 196.6 0.0 1.8 2 AA1_2.hmm 2.2e-58 185.8 0.1 3e-58 185.3 0.1 1.2 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 277.3 0.1 5.9e-86 5.9e-86 6 345 .. 59 605 .. 54 611 .. 0.79 Alignments for each domain: == domain 1 score: 277.3 bits; conditional E-value: 5.9e-86 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrql 54 + + r+v+++Ngq+PgP+ieanegD+v++tV+N+l + +tiHwhG++q+ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 59 TaaldgFWRPVLAINGQIPGPLIEANEGDHVEITVVNQL-DSHLTIHWHGIHQN 111 455566789******************************.679*********** PP AA1.hmm 55 gtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGal 107 gtnw+DG++g+tqcpi+p g +tY+ft++ q+Gty sH+s +adG++G++ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 112 GTNWEDGPSGITQCPIPPfGGLYTYKFTLK-QYGTYCT-SHFSNLKADGVFGPM 163 *****************************8.****986.*************** PP AA1.hmm 108 iirdpks..kekydvddeelvillsdwyhktaeell.....ken...atgaepa 151 ii++p++ k+ +d+d +++v++++dwyh+ ++ ++ + + + +++p 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 164 IIHSPRDplKRGVDYD-RDIVLMVADWYHDISSVIVtqlnsN-QgyrNHSTAPS 215 ***9955443345544.889**********999888888752.23456677788 PP AA1.hmm 152 pdsllinGkgrlync.....s....skle.vlkvepgktyrlrlinaalnaelt 195 p+s++inG g+ +c + + + ++++ +g + r+rlina+++a+++ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 216 PNSAIINGVGTW-DCrfattTqrcrKTFPpQFSLVAGSKTRFRLINAGSHAMFY 268 *********996.664655414454333359*********************** PP AA1.hmm 196 fsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywira 246 +s dnH+l+v eaD+++v p+ v+ ++ + Gqry++++++ ++ +++++ra 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 269 VSADNHTLNVTEADATPVYgPTGVHRITFHNGQRYSIIVDTPLAEagTSFYLRA 322 *****************964999*****************76666557****** PP AA1.hmm 247 slds...a....afdnttalailrYkgassas...................... 271 +++ a + + t+lai+r ++ +++ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 323 KMNLncwAwvasD-VQDTGLAIIRVVHSGQQRnrrlrkdlpttqdwadrsdeqc 375 8887566255544.58999*****977544445678888888888888999999 PP AA1.hmm 272 ...................................................... 271 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 376 mdldsnllvpiipvrvpktvtgsqtmaatfgfrsiatgvrvpvapapaapvspa 429 999999999999999999999999999999999999999999999999988888 PP AA1.hmm 272 ...................................................... 271 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 430 alstpaslerkfhpiinkrqvkipvfqrppslgrngtapsiidqggppptpagt 483 888888888888888888888887777777777777777777777777766666 PP AA1.hmm 272 .........................nvsfvepstslleaysgvdetkaklkln. 299 + 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 484 eprfyvnniagevfsyqatlndlapG--------------------------Gs 511 66555554444433333322222221..........................02 PP AA1.hmm 300 ...............................hp..lhghdfvvv.......... 310 hp lhg+d+++v 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 512 gvvntsrmatvfyntsdwqdlylvnldsgldHPfhLHGMDMHIVavgngtptpe 565 2222223333333355555555556667788*************8887666655 PP AA1.hmm 311 .nfd.....aedeakrdtvavpkggwvvirfvadnpgvwll 345 +e++ +rdt++v+ g +v r+ +d pgvw++ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 566 nL-RnltyrTENPLRRDTFLVKGGTFLVARILTDLPGVWMM 605 40.145465888888*************************9 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 232.8 0.7 1.2e-72 1.2e-72 9 291 .. 44 345 .. 38 371 .. 0.86 Alignments for each domain: == domain 1 score: 232.8 bits; conditional E-value: 1.2e-72 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnl 62 ++ ++r+++l vt++t+a DG+ +++l++ngq+Pgp+iea+ GD++e+tv+n+l 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 44 SERQVRKFKLVVTNTTAALDGFWRPVLAINGQIPGPLIEANEGDHVEITVVNQL 97 56789************************************************* PP AA1_3.hmm 63 kknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefratqyGtswYHs 115 +++ +iHwHGi+q+ tn++DG +g+tqCpi+p g +tY+f+ +qyGt + s 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 98 DSH-LTIHWHGIHQNGTNWEDGPSGITQCPIPPfGGLYTYKFTLKQYGT-YCTS 149 965.78**************************98899***********8.679* PP AA1_3.hmm 116 HyslQyadGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae 164 H+s adGv+Gp++i+ P +yd d+ +l+++dw+h+ + +v++ + 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 150 HFSNLKADGVFGPMIIHSPrdplkRGVDYDRDI-VLMVADWYHDISSVIVTQLN 202 ******************944333347899996.7899*****98887777766 PP AA1_3.hmm 165 ......asggppvadniLingknkvkkskkeeegeyse.....vklekgkkyrl 207 +++++p+ ++ +ing ++++++ ++++++ + ++l +g k r+ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 203 snqgyrNHSTAPSPNSAIINGVGTWDCRFATTTQRCRKtfppqFSLVAGSKTRF 256 666787778889***************98854444433333448999******* PP AA1_3.hmm 208 rlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydvivean 260 rlin++++++f +s d+H+l+v +aD p+ p ++ ++ + gqRy +iv++ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 257 RLINAGSHAMFYVSADNHTLNVTEADATPVYgPTGVHRITFHNGQRYSIIVDTP 310 ******************************758999****************97 PP AA1_3.hmm 261 qe..eenywlraelaeaCskln..aeekeikailr 291 + ++++lra+++ +C ++ + +++ ai+r 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 311 LAeaGTSFYLRAKMNLNCWAWVasDVQDTGLAIIR 345 665699************99751134444455554 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 196.6 0.0 1.3e-61 1.3e-61 2 279 .. 67 367 .. 66 406 .. 0.91 2 ? -0.7 0.0 0.13 0.13 152 309 .. 514 560 .. 495 576 .. 0.59 Alignments for each domain: == domain 1 score: 196.6 bits; conditional E-value: 1.3e-61 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGa 55 r+v+++Ngq P p ie+n+gd+ve+++ N+l d++ ++H+HG++qngtn+ DG+ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 67 RPVLAINGQIPGPLIEANEGDHVEITVVNQL-DSHLTIHWHGIHQNGTNWEDGP 119 899****************************.8999****************** PP AA1_2.hmm 56 smvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeep 108 s++tqCpipp g +tY+ft+ +q+GtY sH ++ DG+ gp+ii+ +++p 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 120 SGITQCPIPPfGGLYTYKFTL-KQYGTYC-TSHFSNLKADGVFGPMIIHSPRDP 171 ********9967889******.******5.6*********************99 PP AA1_2.hmm 109 y....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.... 152 +yd++++l+++dwYh+ s+ +v+++ s+ y+++ + p p+s+++ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 172 LkrgvDYDRDIVLMVADWYHDISSVIVTQLNSNqgYRNHSTAPSPNSAIIngvg 225 88888************************98887799999************** PP AA1_2.hmm 153 .............netenatlevepgktYllriinvgafasqylvledhemtiv 193 +t ++++ +g + ++r+in g a++y++ ++h++++ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 226 twdcrfatttqrcRKTFPPQFSLVAGSKTRFRLINAGSHAMFYVSADNHTLNVT 279 *********99988888999********************************** PP AA1_2.hmm 194 evDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetmldvvp 245 e+D++ v p+ v+ ++ +QRys++v + + +++ l akm+ + + v+ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 280 EADATPVYgPTGVHRITFHNGQRYSIIVDTPLAeAGTSFYLRAKMNLNCWAWVA 333 *****9963667*****************9875277****************** PP AA1_2.hmm 246 ddlqlnvtstlvydksaalaeastvdelealdDf 279 +d+q + ++ +s ++ + ++l +++D+ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 334 SDVQDTGLAIIRVVHSGQQRNRRLRKDLPTTQDW 367 ****999999988888777777766666555554 PP == domain 2 score: -0.7 bits; conditional E-value: 0.13 AA1_2.hmm 152 vnetenatlevepgktYllriinvgafasqylvledhemtivevDGvdvepsev 205 vn+++ at+ ++ l ++n+ + ++l + +m+iv v 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 514 VNTSRMATVFYNTSDWQDLYLVNLDSGLDHPFHLHGMDMHIVAV---------- 557 55555555555555555555666666666666666666666655.......... PP AA1_2.hmm 206 dslyiavaQRysvLvkakndtsknyalvakmdetmldvvpddlqlnvtstlvyd 259 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 - ------------------------------------------------------ - ...................................................... PP AA1_2.hmm 260 ksaalaeastvdelealdDfkleplekeelleepdkeieldvemdnlkdg 309 ++g 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 558 -----------------------------------------------GNG 560 ...............................................333 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 185.3 0.1 3e-58 3e-58 3 267 .. 62 345 .. 60 392 .. 0.86 Alignments for each domain: == domain 1 score: 185.3 bits; conditional E-value: 3e-58 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfq 56 DGf r + +ng++pgpli +++gd+++i+vvn+L+ + +ihwhg++q 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 62 LDGFWRPVLAINGQIPGPLIEANEGDHVEITVVNQLDSH-----LTIHWHGIHQ 110 6***********************************875.....58******** PP AA1_1.hmm 57 kgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqycdglrGa 109 +gtnw+dgp+ +tqCPi p g ++y+f++ +q Gt+ sh+s+ dg+ G+ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 111 NGTNWEDGPSGITQCPIPPfGGLYTYKFTL-KQYGTYC-TSHFSNLKADGVFGP 162 ******************98899*****99.899**96.7************** PP AA1_1.hmm 110 lvvydpedplkslydvddestvitladwyhtaakell............klvav 151 ++++ p+dplk+ d d + v+++adwyh ++ + ++++ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 163 MIIHSPRDPLKRGVDYDRD-IVLMVADWYHDISSVIVtqlnsnqgyrnhSTAPS 215 ***************9876.799********9999888899999999888889* PP AA1_1.hmm 152 adstlinGlgrya....ggpeae....lavvnvekgkrYrfrlvsiscdpnftf 197 ++s++inG+g + ++++ + +g + rfrl++ +++ f + 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 216 PNSAIINGVGTWDcrfaTTTQRCrktfPPQFSLVAGSKTRFRLINAGSHAMFYV 269 *********97653321443322111134578999******************* PP AA1_1.hmm 198 sidghnltvieadgvnt.kpltvdsiqifagqrysvvlean..qevdnYwiran 248 s d+h+l+v ead++ + p+ v++i+ gqrys+++++ ++ +++ra+ 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 270 SADNHTLNVTEADATPVyGPTGVHRITFHNGQRYSIIVDTPlaEAGTSFYLRAK 323 **************9873699*****************985215567899**** PP AA1_1.hmm 249 pnlgk...ntgfegginsailr 267 +nl+ ++ +++ ai+r 37096|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 324 MNLNCwawVASDVQDTGLAIIR 345 9998744423333334445555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (646 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 108.51 // Query: WAQ80831.1|AA1 [L=724] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.1e-90 290.6 0.0 2.1e-89 288.6 0.0 1.8 1 AA1.hmm 3.9e-69 221.2 0.0 4.2e-67 214.6 0.0 2.9 2 AA1_3.hmm 3e-62 198.6 0.0 4.3e-61 194.8 0.0 2.3 2 AA1_2.hmm 3.4e-58 185.2 0.0 8.4e-57 180.6 0.0 2.4 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 288.6 0.0 2.1e-89 2.1e-89 6 357 .. 67 686 .. 62 687 .. 0.85 Alignments for each domain: == domain 1 score: 288.6 bits; conditional E-value: 2.1e-89 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnw.................aDGvagvtqcpiap.gksft 77 + + r+v+++Ngq+PgP+i+anegD++++tV N++ s g+t+HwhGl q + +DGv gvtqcpi+p g sft WAQ80831.1|AA1 67 TaaldgFLRPVLAINGQIPGPLIQANEGDRLEITVINQM-SVGLTLHWHGLYQASIQTciiiyailfgscngtnwEDGVTGVTQCPIPPdGGSFT 160 4555557799****************************9.79***********8777777999999999999999******************** PP AA1.hmm 78 YeftvteqaGtywyHsHvslqyadGlrGaliirdpks..kekydvddeelvillsdwyhktaeell....ken...atgaepapdsllinGkgrl 163 Yef++++q + +HsH++ adG+ G+lii++p++ k++ d+d +e+v++l+dwyh+t+++++ +e+ t a+p ++s+linG g+ WAQ80831.1|AA1 161 YEFSLHGQLSFDVFHSHHQNLMADGINGPLIIHSPRDplKRHIDFD-QEVVLMLADWYHNTSTDIVehmlSEAgyfGTPAAPGANSALINGVGEW 254 *********************************9966444499999.899***************9888833343455666669*********97 PP AA1.hmm 164 yncs...........sklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywi 244 ncs ++ ++++++g + r+rl+na+++a++++s+d+H+l+v eaDg+ v p ++ + ++ Gqry+v++k+++++ +++++ WAQ80831.1|AA1 255 -NCSqaskaqeceqiHSPPEFTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEADGTGVYgPSAMHRVWLHNGQRYSVVIKTKKEDagRSFYL 348 .5633444555655644569**************************************9985499******************88888767**** PP AA1.hmm 245 raslds...a....afdnttalailrYkgassas............................................................. 271 ra++ds a + + ta +ilr + +s++ WAQ80831.1|AA1 349 RATMDSdcwAwvpdD-IQLTAFGILRLVDGESKRqtistarpqtqdwpdeilgdcvdlptsslvpilqesvptsvagfggfkagfgfqfinntal 442 **9999766255644.57899******6644444578888999999************************************************* PP AA1.hmm 272 ............................................................................................... 271 WAQ80831.1|AA1 443 hitraeavrlaqqanssglslttnprteeletsndlgsflrngsrtsrtllnarsktvqglwkagdfeasnhdlsrrqvlvgqddlprgnrtspl 537 ***************************************99999999999999999999999999999999999999999999999999999999 PP AA1.hmm 272 ......................nvsf.vepstslleay..sgv...detka.klkln....................hp..lhghdfvvv..... 310 n+s+ + p ++l+++ gv ++++ + hp lh d+++v WAQ80831.1|AA1 538 gvtrtggppptpvgtigkfflnNISWaTYPYRPVLHDLtpGGVgavNDSNVaN---ViyptsdwydlylanidpagsHPyhLHALDMHIVaegkg 629 99999999999999999999998888566777888774342335542222231...123345555566667778889*************87777 PP AA1.hmm 311 ..........nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 ++++ ++ +rdt++vp+ + +v+r++ad pg w++hchi +H++ G WAQ80831.1|AA1 630 lptpanlanvTYNTVNPLRRDTIVVPPASFTVLRLRADIPGAWIVHCHIGWHIAAGF 686 7766655544444667777***********************************997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 214.6 0.0 4.2e-67 4.2e-67 9 294 .. 52 376 .. 47 394 .. 0.83 2 ? 1.1 0.0 0.039 0.039 94 141 .. 655 702 .. 650 711 .. 0.84 Alignments for each domain: == domain 1 score: 214.6 bits; conditional E-value: 4.2e-67 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqln.................tneqDGvp 86 + +tr+yt++vte+t+a DG+ +++l++ngq+Pgp+i+a+ GD+le+tv n+++ G ++HwHG+ q + tn++DGv+ WAQ80831.1|AA1 52 AKPKTRKYTFHVTETTAALDGFLRPVLAINGQIPGPLIQANEGDRLEITVINQMS-VGLTLHWHGLYQASiqtciiiyailfgscngTNWEDGVT 145 5679*************************************************98.8*********98532233333333333333389****** PP AA1_3.hmm 87 gvtqCpiap.gesftYefrat.qyGtswYHsHyslQyadGvlGplvinGP...asanydvdlg.pllltdwshesafelveeae......asggp 169 gvtqCpi+p g sftYef+ + q +HsH++ +adG+ Gpl+i+ P + + d d + +l+l+dw+h++ +++ve++ + ++ WAQ80831.1|AA1 146 GVTQCPIPPdGGSFTYEFSLHgQLSFDVFHSHHQNLMADGINGPLIIHSPrdpLKRHIDFDQEvVLMLADWYHNTSTDIVEHMLseagyfGTPAA 240 ********9789******975488899*********************99443355666666415789***********9999877776555667 PP AA1_3.hmm 170 pvadniLingknkvkkskk......eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviv 257 p a++ Ling +++++s++ e+ ++ e+++++g k r+rl+n++v+++f +s+d+H+l+v +aD + p ++ ++++ gqRy v++ WAQ80831.1|AA1 241 PGANSALINGVGEWNCSQAskaqecEQIHSPPEFTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEADGTGVYgPSAMHRVWLHNGQRYSVVI 335 999*************99877766555566667****************************************9658999*************** PP AA1_3.hmm 258 eanqe..eenywlraelaeaCskl..naeekeikailrYee 294 ++++e ++++lra+++++C ++ ++ + ++ +ilr + WAQ80831.1|AA1 336 KTKKEdaGRSFYLRATMDSDCWAWvpDDIQLTAFGILRLVD 376 ***998899************98733355556667776544 PP == domain 2 score: 1.1 bits; conditional E-value: 0.039 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydv 141 +p + ++ + ra+ G H H+ a+G +G +v++ a +++++ WAQ80831.1|AA1 655 PPASFTVLRLRADIPGAWIVHCHIGWHIAAGFAGVVVVQPDAIKEFQI 702 5666677788999999999*******************9888887765 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 194.8 0.0 4.3e-61 4.3e-61 2 267 .. 75 383 .. 74 441 .. 0.90 2 ? 1.0 0.0 0.039 0.039 77 107 .. 667 698 .. 653 709 .. 0.79 Alignments for each domain: == domain 1 score: 194.8 bits; conditional E-value: 4.3e-61 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngt.................namDGasmvtqCpipp.getltYeftveeq 78 r+v+++Ngq P p i++n+gdr+e+++ N++ +lH+HGl+q + n+ DG+++vtqCpipp g ++tYef+++ q WAQ80831.1|AA1 75 RPVLAINGQIPGPLIQANEGDRLEITVINQM-SVGLTLHWHGLYQASIqtciiiyailfgscngtNWEDGVTGVTQCPIPPdGGSFTYEFSLHGQ 168 899****************************.8899*********988889*************9**************984689********** PP AA1_2.hmm 79 vGtYWyHsHskgqYeDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv............... 152 +HsH+++ DG+ gplii+ +++p ++d+e++l+l+dwYh++s+++v+++ls+ y t a p +s+l+ WAQ80831.1|AA1 169 LSFDVFHSHHQNLMADGINGPLIIHSPRDPLkrhiDFDQEVVLMLADWYHNTSTDIVEHMLSEagYFGTPAAPGANSALIngvgewncsqaskaq 263 *9999*********************997777778***************************955556778888899999*************99 PP AA1_2.hmm 153 ...netenatlevepgktYllriinvgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetmld 242 + ++ ++++++g + ++r++n g+ a+++ ++++h++++ e+DG+ v ps ++ + + +QRysv++k+k++ + +++ l a+md++ + WAQ80831.1|AA1 264 eceQIHSPPEFTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEADGTGVYgPSAMHRVWLHNGQRYSVVIKTKKEdAGRSFYLRATMDSDCWA 358 8876677789***************************************99638889*****************997366*************** PP AA1_2.hmm 243 vvpddlqlnvtstlvydksaalaea 267 vpdd+ql + l+ + +++ ++ WAQ80831.1|AA1 359 WVPDDIQLTAFGILRLVDGESKRQT 383 ********99998887666555554 PP == domain 2 score: 1.0 bits; conditional E-value: 0.039 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.e 107 + G++ +H+H + + G+ g+++++++ + WAQ80831.1|AA1 667 DIPGAWIVHCHIGWHIAAGFAGVVVVQPDAiK 698 5579999********************98743 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 180.6 0.0 8.4e-57 8.4e-57 3 252 .. 70 355 .. 68 392 .. 0.82 2 ? -3.2 0.0 0.78 0.78 85 113 .. 665 693 .. 653 698 .. 0.78 Alignments for each domain: == domain 1 score: 180.6 bits; conditional E-value: 8.4e-57 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqk.................gtnwadgpafvtqCPiap.gnsf 79 DGf r + +ng++pgpli++++gd+++i+v+n+++ ++hwhgl+q+ gtnw+dg++ vtqCPi p g sf WAQ80831.1|AA1 70 LDGFLRPVLAINGQIPGPLIQANEGDRLEITVINQMS-----VGLTLHWHGLYQAsiqtciiiyailfgscnGTNWEDGVTGVTQCPIPPdGGSF 159 6********************************9864.....5556666666554222222222222222227889************99678** PP AA1_1.hmm 80 lydfkvpdqaGtfwYHshlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgr 162 +y+f++++q +Hsh+++ + dg+ G+l+++ p+dplk+ d+d+e v++ladwyh++++++ +++ a+s+linG+g WAQ80831.1|AA1 160 TYEFSLHGQLSFDVFHSHHQNLMADGINGPLIIHSPRDPLKRHIDFDQE-VVLMLADWYHNTSTDIVehmlseagyfgtPAAPGANSALINGVGE 253 ***********99*********************************987.699***********99989999999997777799*********** PP AA1_1.hmm 163 yagg...peaelavv......nvekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqevd..nYwi 245 ++ + +++e + + ++g + rfrlv+ ++ f +s+d+h+l+v eadg+ + p ++++ + gqrysvv+++++e + +++ WAQ80831.1|AA1 254 WNCSqasKAQECEQIhsppefTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEADGTGVyGPSAMHRVWLHNGQRYSVVIKTKKEDAgrSFYL 348 9955122333344432222226899*********************************976379*******************988653238999 PP AA1_1.hmm 246 ranpnlg 252 ra++++ WAQ80831.1|AA1 349 RATMDSD 355 9998865 PP == domain 2 score: -3.2 bits; conditional E-value: 0.78 AA1_1.hmm 85 vpdqaGtfwYHshlstqycdglrGalvvy 113 +d G++ H h+ g G +vv WAQ80831.1|AA1 665 RADIPGAWIVHCHIGWHIAAGFAGVVVVQ 693 4677899999**************99995 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (724 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02 # Mc/sec: 44.22 // Query: 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 [L=725] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.4e-86 279.3 1.1 1.1e-80 259.9 0.5 2.1 2 AA1.hmm 1.1e-67 216.5 0.7 9.1e-56 177.3 0.3 2.6 3 AA1_3.hmm 3.1e-60 191.9 0.9 1.6e-55 176.4 0.5 2.6 3 AA1_1.hmm 1.7e-59 189.6 0.6 3.3e-56 178.7 0.0 3.6 4 AA1_2.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.0 0.0 3.8e-07 3.8e-07 6 31 .. 70 100 .. 65 104 .. 0.82 2 ! 259.9 0.5 1.1e-80 1.1e-80 48 356 .. 151 685 .. 145 687 .. 0.85 Alignments for each domain: == domain 1 score: 18.0 bits; conditional E-value: 3.8e-07 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtv 31 + + r+v+++Ngq+PgP+ieaneg+ + 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 70 TaaldgFLRQVMAINGQIPGPLIEANEGEWI 100 455556789*******************987 PP == domain 2 score: 259.9 bits; conditional E-value: 1.1e-80 AA1.hmm 48 whGlrqlgtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqya 100 ++ ++q+gtnw+DGv gvtqcpi++ g +tY+f +++q Gt+wyHsH++ a 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 151 FNRVQQNGTNWEDGVTGVTQCPIPSnGGIYTYKFDTNGQFGTFWYHSHHQNLMA 204 67899******************98899************************** PP AA1.hmm 101 dGlrGaliirdpks..kekydvddeelvillsdwyhktaeell....ken...a 145 dG+ G++ii++p++ k++ d+d +++v++++dwyh+t+++++ +e+ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 205 DGINGPMIIHSPRDplKRSIDFD-HDVVLMMADWYHNTSSDIVqemlSEAgyfG 257 **********9966444499998.788***************988773334345 PP AA1.hmm 146 tgaepapdsllinGkgrlync....s.......sklevlkvepgktyrlrlina 188 t a+p ++ +linG g+ nc + ++ +++v++g++ r+rlina 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 258 TPAAPGANCALINGVGQW-NCslatTtqqcnqvTSPPEFTVTAGQRIRFRLINA 310 5556669*********97.5635440445546655569**************** PP AA1.hmm 189 alnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa.. 239 +++a+++fs+d+H l++ eaD + + p + ++ ++ Gqry+v++++++++ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 311 GVHAMFFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTKEEDvd 364 **********************998549*******************9888876 PP AA1.hmm 240 gnywiraslds...a....afdnttalailrYkgassas............... 271 +n+++ra+++s a + + tal+ilr +++ + 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 365 RNFYMRATMNSdcwAwvpnD-IQDTALGILRLAHDDARPenvskarpdtqgwpq 417 7******9998676255534.68899******87554446778889999999** PP AA1.hmm 272 ...................................................... 271 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 418 dfpqecididpslmvpilkstvpasvvgsgtfqagfgfqlinntaehltreeav 471 ****************************************************** PP AA1.hmm 272 ...................................................... 271 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 472 rlakeahhdssrdpnlrgkkkvpatfhgkgggyqensssrhaavdtgqeknrqh 525 ****************************************************** PP AA1.hmm 272 ..................................nvsf.vepstslleay..sg 288 nvs+ + p +++l+++ g 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 526 npqrfggrkspagitrlagppptpagtigkyfvnNVSWtTFPYQPVLHDLtpGG 579 *********************999999999999999996788999999853533 PP AA1.hmm 289 v......detka..............klkln.......hp..lhghdfvvv... 310 v hp lh +d+++v 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 580 VgtingsR---VanvifptaewydlyL---VnvdaagsHPyhLHAMDMHIVayg 627 35544431...1333344444444441...15556677*************766 PP AA1.hmm 311 ............nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaH 352 ++++e++ +rdtv+vp+ + vv+r++ad pg w++hchi +H 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 628 rgfptpeklskiKYSTENPLRRDTVVVPSASFVVVRLNADIPGAWIMHCHIGWH 681 666655544433333888888********************************* PP AA1.hmm 353 lsmG 356 ++ G 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 682 IAGG 685 *998 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.5 0.0 6.9e-13 6.9e-13 10 55 .. 56 101 .. 49 108 .. 0.90 2 ! 177.3 0.3 9.1e-56 9.1e-56 72 301 .. 152 403 .. 144 415 .. 0.86 3 ? -2.8 0.0 0.63 0.63 104 132 .. 665 693 .. 654 713 .. 0.74 Alignments for each domain: == domain 1 score: 36.5 bits; conditional E-value: 6.9e-13 AA1_3.hmm 10 tgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtle 55 + +tr+y+l+vte+t+a DG+ ++++++ngq+Pgp+iea+ G++++ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 56 KPTTRRYDLTVTETTAALDGFLRQVMAINGQIPGPLIEANEGEWIV 101 5689**************************************9985 PP == domain 2 score: 177.3 bits; conditional E-value: 9.1e-56 AA1_3.hmm 72 HGirqlntneqDGvpgvtqCpiap.gesftYefrat.qyGtswYHsHyslQyad 123 ++q+ tn++DGv+gvtqCpi+ g +tY+f ++ q+Gt wYHsH++ +ad 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 152 NRVQQNGTNWEDGVTGVTQCPIPSnGGIYTYKFDTNgQFGTFWYHSHHQNLMAD 205 56899*****************864789*****9865***************** PP AA1_3.hmm 124 GvlGplvinGP.....asanydvdlgpllltdwshesafelveeae......as 166 G+ Gp++i+ P s ++d+d+ +l+++dw+h++ +++v+e+ + 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 206 GINGPMIIHSPrdplkRSIDFDHDV-VLMMADWYHNTSSDIVQEMLseagyfGT 258 **********955544467777775.6899***********9999877765555 PP AA1_3.hmm 167 ggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrlintsv 214 ++p a+ Ling +++++s + ++ ++ e+++++g++ r+rlin++v 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 259 PAAPGANCALINGVGQWNCSLAtttqqcNQVTSPPEFTVTAGQRIRFRLINAGV 312 66689999***********988666665555666679***************** PP AA1_3.hmm 215 dstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe..een 265 +++f fs+d+H l++ +aD i p + +++++ gqRy viv++++e ++n 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 313 HAMFFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTKEEdvDRN 366 ***********************659999*******************9999** PP AA1_3.hmm 266 ywlraelaeaCskl..naeekeikailrYeeassaept 301 +++ra+++++C ++ n+ ++++ +ilr ++++ p+ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 367 FYMRATMNSDCWAWvpNDIQDTALGILRLAHDDA-RPE 403 ***********99855677888899999877765.444 PP == domain 3 score: -2.8 bits; conditional E-value: 0.63 AA1_3.hmm 104 ratqyGtswYHsHyslQyadGvlGplvin 132 +a+ G H H+ a G +G +v++ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 665 NADIPGAWIMHCHIGWHIAGGYAGVVVVQ 693 55555777788888888888888888876 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.0 0.0 9.4e-06 9.4e-06 3 29 .. 73 99 .. 71 106 .. 0.91 2 ! 176.4 0.5 1.6e-55 1.6e-55 50 267 .. 150 394 .. 142 413 .. 0.83 3 ? -3.5 0.0 0.94 0.94 75 113 .. 655 693 .. 653 695 .. 0.79 Alignments for each domain: == domain 1 score: 13.0 bits; conditional E-value: 9.4e-06 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdk 29 DGf r+++ +ng++pgpli +++g+ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 73 LDGFLRQVMAINGQIPGPLIEANEGEW 99 6***********************985 PP == domain 2 score: 176.4 bits; conditional E-value: 1.6e-55 AA1_1.hmm 50 hwhglfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqy 102 ++ + q+gtnw+dg++ vtqCPi + g ++y+f++++q GtfwYHsh+++ + 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 150 AFNRVQQNGTNWEDGVTGVTQCPIPSnGGIYTYKFDTNGQFGTFWYHSHHQNLM 203 677889******************873578************************ PP AA1_1.hmm 103 cdglrGalvvydpedplkslydvddestvitladwyhtaakell.......... 146 dg+ G+++++ p+dplk+ d+d++ v+++adwyh++++++ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 204 ADGINGPMIIHSPRDPLKRSIDFDHD-VVLMMADWYHNTSSDIVqemlseagyf 256 ***********************986.799**********99988999999999 PP AA1_1.hmm 147 ..klvavadstlinGlgrya...ggpeaelavv......nvekgkrYrfrlvsi 189 +++ a+ +linG+g+++ ++++++ v +v++g+r rfrl++ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 257 gtPAAPGANCALINGVGQWNcslATTTQQCNQVtsppefTVTAGQRIRFRLINA 310 77777999**********9954434444443332222228************** PP AA1_1.hmm 190 scdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqe.vd 241 ++ f fs+d+h l++ ead++ + p + +i + gqrysv++++++e vd 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 311 GVHAMFFFSVDEHMLNITEADSTGIyGPSDFRHIWLHNGQRYSVIVQTKEEdVD 364 **********************976379******************99765244 PP AA1_1.hmm 242 .nYwiranpnlgk...ntgfegginsailr 267 n+++ra++n+ + +++ ilr 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 365 rNFYMRATMNSDCwawVPNDIQDTALGILR 394 5********998744333333344445555 PP == domain 3 score: -3.5 bits; conditional E-value: 0.94 AA1_1.hmm 75 pgnsflydfkvpdqaGtfwYHshlstqycdglrGalvvy 113 p++sf+ +d G++ H h+ g G +vv 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 655 PSASFVVVRLNADIPGAWIMHCHIGWHIAGGYAGVVVVQ 693 5666666555678889999******99999999999985 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 4.7 0.0 0.0028 0.0028 2 25 .. 78 101 .. 77 117 .. 0.85 2 ! 178.7 0.0 3.3e-56 3.3e-56 44 267 .. 154 404 .. 144 443 .. 0.90 3 ? 1.0 0.0 0.038 0.038 151 194 .. 582 625 .. 556 640 .. 0.84 4 ? -0.7 0.0 0.12 0.12 77 105 .. 667 695 .. 653 703 .. 0.84 Alignments for each domain: == domain 1 score: 4.7 bits; conditional E-value: 0.0028 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrve 25 r+v+++Ngq P p ie+n+g+ ++ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 78 RQVMAINGQIPGPLIEANEGEWIV 101 89******************9765 PP == domain 2 score: 178.7 bits; conditional E-value: 3.3e-56 AA1_2.hmm 44 lfqngtnamDGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGl 96 + qngtn+ DG+++vtqCpip g +tY+f+++ q Gt+WyHsH+++ DG+ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 154 VQQNGTNWEDGVTGVTQCPIPSnGGIYTYKFDTNGQFGTFWYHSHHQNLMADGI 207 569*****************9626679*************************** PP AA1_2.hmm 97 rgpliiedkeepy....eydeeltltlsdwYheeskelvkeflskynptg..ae 144 gp+ii+ +++p ++d++++l+++dwYh++s+++v+e+ls++ g a 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 208 NGPMIIHSPRDPLkrsiDFDHDVVLMMADWYHNTSSDIVQEMLSEAGYFGtpAA 261 ********998887788****************************666550056 PP AA1_2.hmm 145 pipdsllv..................netenatlevepgktYllriinvgafas 180 p + +l+ + t+ +++v++g++ ++r+in g+ a+ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 262 PGANCALIngvgqwncslatttqqcnQVTSPPEFTVTAGQRIRFRLINAGVHAM 315 66666777**************99977788899********************* PP AA1_2.hmm 181 qylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyal 232 +++++++h ++i e+D++ + ps ++ + +QRysv+v++k++ ++n+ + 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 316 FFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTKEEdVDRNFYM 369 *****************98853889*******************97589***** PP AA1_2.hmm 233 vakmdetmldvvpddlqlnvtstlvydksaalaea 267 a+m+++ + vp+d+q + l+ +++ a +e+ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 370 RATMNSDCWAWVPNDIQDTALGILRLAHDDARPEN 404 ******************99999998888777765 PP == domain 3 score: 1.0 bits; conditional E-value: 0.038 AA1_2.hmm 151 lvnetenatlevepgktYllriinvgafasqylvledhemtive 194 +n ++ a++ + + + Y l ++nv a s+ +l +m+iv 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 582 TINGSRVANVIFPTAEWYDLYLVNVDAAGSHPYHLHAMDMHIVA 625 56777888888999999***********************9996 PP == domain 4 score: -0.7 bits; conditional E-value: 0.12 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedk 105 + G++ +H+H + + G g+++++++ 2242|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 667 DIPGAWIMHCHIGWHIAGGYAGVVVVQPD 695 4579999*******************987 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (725 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 116.95 // Query: 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 [L=703] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-101 327.8 0.0 4.9e-101 326.9 0.0 1.4 1 AA1.hmm 1.3e-78 252.3 0.0 1e-77 249.4 0.2 2.0 2 AA1_3.hmm 3.3e-73 234.7 0.0 1.3e-71 229.4 0.0 2.9 3 AA1_2.hmm 5.2e-69 220.7 0.1 1.1e-68 219.6 0.1 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 326.9 0.0 4.9e-101 4.9e-101 6 357 .. 66 664 .. 61 665 .. 0.84 Alignments for each domain: == domain 1 score: 326.9 bits; conditional E-value: 4.9e-101 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwh 49 + + r+v+++N+q+PgP+ieanegD++++tV N++ + ++t+Hwh 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 66 TaaldgFLRPVLAINNQIPGPLIEANEGDRLEITVINQM-NISLTMHWH 113 4555557899****************************9.789****** PP AA1.hmm 50 GlrqlgtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvsl 97 Gl q+g+nw+DGv gvtqcpi+p g ++tY+f +++q Gt+wyHsH++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 114 GLYQNGSNWEDGVTGVTQCPIPPnGGTYTYKFDLNGQFGTFWYHSHHQN 162 ***********************9************************* PP AA1.hmm 98 qyadGlrGaliirdpks..kekydvddeelvillsdwyhktaeell... 141 adG+ G++ii++p++ k+ +d+d +++vi+l+dwyh+t+++++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 163 LMADGINGPMIIHSPRDplKRWVDFD-HDVVIMLNDWYHNTSSDIVkrm 210 *************9965443378887.788****************988 PP AA1.hmm 142 ....kenatgaepapdsllinGkgrlync....s.......sklevlkv 175 + t a+p ++s+linG g+ nc ++ ++ + 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 211 lseaGYAGTPAAPGANSALINGVGEW-NCslatRtqrceqvASPPEFII 258 854322255566669*********97.5745540455545544469*** PP AA1.hmm 176 epgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqi 223 +g++ r+rlina+++a++++s+d+H+l++ eaD + + p + ++ + 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 259 AAGEKIRFRLINAGVHAMFFYSVDEHTLNITEADSTGIYgPSDFRQIWL 307 ***********************************998549******** PP AA1.hmm 224 apGqrydvllkanqsa..gnywiraslds...a....afdnttalailr 263 + Gqry+v++++++++ ++ ++ra++ds + + + ta +ilr 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 308 HNGQRYSVIVQTKKEDagKSIYMRATMDSdcwSwvpnD-IQDTAFGILR 355 ***********98888777******9999766255534.68899***** PP AA1.hmm 264 Ykgassas......................................... 271 ++++ + 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 356 LVDDENRPgnvsiarpttrawpqefpeecldinprmmvpilkrsvpstv 404 *88776668889999999999999999********************** PP AA1.hmm 272 ................................................. 271 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 405 vgsgsfeagfgfqlinntekrvtraqaarlveelnldwtrdrnqrakkk 453 **********************************999999999999999 PP AA1.hmm 272 ................................................. 271 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 454 fatpreddentnrnwpvartvrwrkakrvsaesswlqsgsvkrqveips 502 9999999999999999999999999999999999999999999999999 PP AA1.hmm 272 ...................................nvsf.vepstslle 284 nvs+ + p +++l+ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 503 qisapfgirtnssgvtrlagppptpvgtigkyfinNVSWsTFPYQPVLH 551 9999999999999999999999999999999999888887778888888 PP AA1.hmm 285 ay..sgv......detka...........klkln..........hp..l 302 ++ gv + hp l 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 552 DLtiGGVgsinssR---VaniiyptaewyD---LylvnvdatgsHPyhL 594 84343345443320...2334444334441...04445556677***** PP AA1.hmm 303 hghdfvvv...............nfdaedeakrdtvavpkggwvvirfv 336 h +d+++v +++++++ +rdtv+vp+ + v++r++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 595 HAMDMHIVafgrgfptaerlkqvEYNTDNPLRRDTVVVPPASFVIVRLN 643 ********777777766655555555888888***************** PP AA1.hmm 337 adnpgvwllhchieaHlsmGl 357 ad pg w++hchi +H++ G 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 644 ADIPGAWIMHCHIGWHIAGGF 664 *****************9997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 249.4 0.2 1e-77 1e-77 9 296 .. 51 360 .. 45 380 .. 0.87 2 ? -0.0 0.0 0.089 0.089 96 155 .. 635 694 .. 630 699 .. 0.78 Alignments for each domain: == domain 1 score: 249.4 bits; conditional E-value: 1e-77 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevt 57 + +tr+ytl+vte+t+a DG+ +++l++n+q+Pgp+iea+ GD+le+t 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 51 AEPTTRRYTLTVTETTAALDGFLRPVLAINNQIPGPLIEANEGDRLEIT 99 45689******************************************** PP AA1_3.hmm 58 vknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefra 105 v n+++ ++HwHG+ q+ +n++DGv+gvtqCpi+p g ++tY+f 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 100 VINQMN-ISLTMHWHGLYQNGSNWEDGVTGVTQCPIPPnGGTYTYKFDL 147 ****98.5788**************************9678******97 PP AA1_3.hmm 106 t.qyGtswYHsHyslQyadGvlGplvinGPas.....anydvdlgplll 148 + q+Gt wYHsH++ +adG+ Gp++i+ P ++d+d+ +++l 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 148 NgQFGTFWYHSHHQNLMADGINGPMIIHSPRDplkrwVDFDHDV-VIML 195 55***************************964332225777775.6899 PP AA1_3.hmm 149 tdwshesafelveeae......asggppvadniLingknkvkkskk... 188 +dw+h++ +++v+++ + ++p a++ Ling +++++s + 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 196 NDWYHNTSSDIVKRMLseagyaGTPAAPGANSALINGVGEWNCSLAtrt 244 ***********9999877765445556899*************988777 PP AA1_3.hmm 189 ...eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDf 234 e+ ++ e+ + +g+k r+rlin++v+++f +s+d+H+l++ +aD 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 245 qrcEQVASPPEFIIAAGEKIRFRLINAGVHAMFFYSVDEHTLNITEADS 293 7766677777899************************************ PP AA1_3.hmm 235 vpie.pyttdslligigqRydviveanqe..eenywlraelaeaCskl. 279 i p + +++++ gqRy viv++++e ++ ++ra+++++C ++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 294 TGIYgPSDFRQIWLHNGQRYSVIVQTKKEdaGKSIYMRATMDSDCWSWv 342 ***659999******************9988999***********9974 PP AA1_3.hmm 280 .naeekeikailrYeeas 296 n+ ++++ +ilr +++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 343 pNDIQDTAFGILRLVDDE 360 456777778888765554 PP == domain 2 score: -0.0 bits; conditional E-value: 0.089 AA1_3.hmm 96 gesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydvdlg 144 + + + +a+ G H H+ a G +G +v++ a + + + + 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 635 ASFVIVRLNADIPGAWIMHCHIGWHIAGGFAGIVVVQPEAISRFVIPEE 683 555556677777899999***************9999888888887777 PP AA1_3.hmm 145 pllltdwshes 155 ++ l d +e 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 684 NMALCDLRTEP 694 77777776665 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 229.4 0.0 1.3e-71 1.3e-71 2 264 .. 74 362 .. 73 384 .. 0.92 2 ? -0.1 0.0 0.084 0.084 153 194 .. 562 603 .. 535 613 .. 0.82 3 ? 0.5 0.0 0.056 0.056 77 106 .. 645 674 .. 630 693 .. 0.81 Alignments for each domain: == domain 1 score: 229.4 bits; conditional E-value: 1.3e-71 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtn 50 r+v+++N+q P p ie+n+gdr+e+++ N++ + + ++H+HGl+qng+n 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 74 RPVLAINNQIPGPLIEANEGDRLEITVINQM-NISLTMHWHGLYQNGSN 121 899****************************.8999************* PP AA1_2.hmm 51 amDGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrg 98 + DG+++vtqCpipp g t+tY+f+++ q Gt+WyHsH+++ DG+ g 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 122 WEDGVTGVTQCPIPPnGGTYTYKFDLNGQFGTFWYHSHHQNLMADGING 170 *************984689****************************** PP AA1_2.hmm 99 pliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynpt 141 p+ii+ +++p ++d++++++l dwYh++s+++vk++ls+ y t 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 171 PMIIHSPRDPLkrwvDFDHDVVIMLNDWYHNTSSDIVKRMLSEagYAGT 219 ********98888889**************************9566677 PP AA1_2.hmm 142 gaepipdsllv..................netenatlevepgktYllri 172 a p +s+l+ + + ++ + +g++ ++r+ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 220 PAAPGANSALIngvgewncslatrtqrceQVASPPEFIIAAGEKIRFRL 268 78888899999**************9988778888999*********** PP AA1_2.hmm 173 invgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLv 220 in g+ a+++ ++++h+++i e+D++ + ps ++ + +QRysv+v 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 269 INAGVHAMFFYSVDEHTLNITEADSTGIYgPSDFRQIWLHNGQRYSVIV 317 *************************98853889**************** PP AA1_2.hmm 221 kaknd.tsknyalvakmdetmldvvpddlqlnvtstlvydksaal 264 ++k++ + k+ + a+md++ + vp+d+q + l+ ++++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 318 QTKKEdAGKSIYMRATMDSDCWSWVPNDIQDTAFGILRLVDDENR 362 **9973669********************9988887776655555 PP == domain 2 score: -0.1 bits; conditional E-value: 0.084 AA1_2.hmm 153 netenatlevepgktYllriinvgafasqylvledhemtive 194 n+++ a++ + + Y l ++nv a s+ +l +m+iv 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 562 NSSRVANIIYPTAEWYDLYLVNVDATGSHPYHLHAMDMHIVA 603 666666677777788999999999999999999999999986 PP == domain 3 score: 0.5 bits; conditional E-value: 0.056 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke 106 + G++ +H+H + + G+ g ++++++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 645 DIPGAWIMHCHIGWHIAGGFAGIVVVQPEA 674 5579999*******************9976 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 219.6 0.1 1.1e-68 1.1e-68 3 253 .. 69 338 .. 67 369 .. 0.86 Alignments for each domain: == domain 1 score: 219.6 bits; conditional E-value: 1.1e-68 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihw 51 DGf r + +n+++pgpli +++gd+++i+v+n+ m+ s ++hw 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 69 LDGFLRPVLAINNQIPGPLIEANEGDRLEITVINQ-----MNISLTMHW 112 6********************************97.....678999*** PP AA1_1.hmm 52 hglfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshls 99 hgl+q+g+nw+dg++ vtqCPi p g +++y+f++++q GtfwYHsh++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 113 HGLYQNGSNWEDGVTGVTQCPIPPnGGTYTYKFDLNGQFGTFWYHSHHQ 161 **********************994579********************* PP AA1_1.hmm 100 tqycdglrGalvvydpedplkslydvddestvitladwyhtaakell.. 146 + + dg+ G+++++ p+dplk+ d+d++ vi+l dwyh++++++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 162 NLMADGINGPMIIHSPRDPLKRWVDFDHD-VVIMLNDWYHNTSSDIVkr 209 **************************986.799***********99989 PP AA1_1.hmm 147 ..........klvavadstlinGlgryagg.........peaelavvnv 176 +++ a+s+linG+g ++ + + a+ + 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 210 mlseagyagtPAAPGANSALINGVGEWNCSlatrtqrceQVASPPEFII 258 999999987767799***********99542222222222222234568 PP AA1_1.hmm 177 ekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqi 224 ++g++ rfrl++ ++ f +s+d+h+l++ ead++ + p + +i + 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 259 AAGEKIRFRLINAGVHAMFFYSVDEHTLNITEADSTGIyGPSDFRQIWL 307 99*********************************976379******** PP AA1_1.hmm 225 fagqrysvvleanqevd..nYwiranpnlgk 253 gqrysv++++++e + ++ra++++ 13475|PuccoNC29_1_GeneCatalog_proteins_20170808.aa.fasta|AA1 308 HNGQRYSVIVQTKKEDAgkSIYMRATMDSDC 338 ***********98875422677888877655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (703 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 74.33 // Query: 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 [L=708] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-102 330.8 0.5 5e-102 330.1 0.5 1.3 1 AA1.hmm 1.8e-79 255.2 0.1 2e-78 251.7 0.3 2.0 2 AA1_3.hmm 3e-74 238.1 0.0 5.3e-73 234.0 0.0 2.2 2 AA1_2.hmm 1.9e-69 222.1 0.0 3.7e-69 221.2 0.0 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 330.1 0.5 5e-102 5e-102 4 357 .. 66 669 .. 63 670 .. 0.84 Alignments for each domain: == domain 1 score: 330.1 bits; conditional E-value: 5e-102 AA1.hmm 4 eek.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGl 51 e++ + r+v+++Ngq+PgP+ieanegD++++tV N++ + g+t+HwhGl 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 66 ETTaaldgFLRPVLAINGQVPGPLIEANEGDQLEITVINHM-KVGLTLHWHGL 117 55555566789*****************************9.68********* PP AA1.hmm 52 rqlgtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGl 103 q+gtnw+DGv gvtqcpi+p g s+tY+f++++q Gt+wyHsH++ adG+ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 118 YQNGTNWEDGVTGVTQCPIPPdGGSYTYRFRTDGQFGTFWYHSHHQNLMADGI 170 ***************************************************** PP AA1.hmm 104 rGaliirdpks..kekydvddeelvillsdwyhktaeell......ken.atg 147 G+lii++p++ k++ d+d +e+v++l+dwyh+t+++++ ++ t 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 171 NGPLIIHSPRDplKRHTDFD-QEVVLVLADWYHNTSTDIVehmlsePGYfGTP 222 *******9966544489998.899****************8887542224666 PP AA1.hmm 148 aepapdsllinGkgrlync....s.......sklevlkvepgktyrlrlinaa 189 a+p p+s+linG g+ + c + ++ ++++e+g + r+rlina+ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 223 AAPGPNSALINGIGEWN-CsqatKseqckqiNSPPEFTFEAGGKIRFRLINAG 274 6777**********975.634440455556644569***************** PP AA1.hmm 190 lnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa.. 239 ++a++++s+d+H+l+v eaDg+ + p ++ + ++ Gqry+v++++ +++ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 275 VHAMFFYSVDEHTLNVTEADGTGIYgPPALHRVWLHNGQRYSVVINTREEDag 327 *********************99854899*****************8888876 PP AA1.hmm 240 gnywiraslds...a....afdnttalailrYkg....assas.......... 271 +++++ra++ds a + + ta +ilr + a + 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 328 RSFYLRATMDSdcwAwvpnD-IQLTAFGILRLVDggynA---Kkvshsrpvtq 376 7******9999766255534.578999****85545541...23446778889 PP AA1.hmm 272 ..................................................... 271 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 377 dwsdeilgdcvdlptssmvpilkqsvptsvvgsgsfkagfgfqfindtsehvs 429 999999999999999999*********************************** PP AA1.hmm 272 ..................................................... 271 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 430 raeavqlaqqvnstslllttnprtedlnetsdtsnylrndtgrtllaerihpa 482 ************99999999999999999999999999999999999999999 PP AA1.hmm 272 ..................................................... 271 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 483 rglskaqsqpeypqtaynkrqvkvgqhnlpsgnrtnqlgitrtggppptpagt 535 99999999999999999999888888888888888888888888888888888 PP AA1.hmm 272 .......nvsf.vepstslleay..sgv...detkaklkln............ 299 n+s+ + p +++l+++ gv ++++ + 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 536 igkfflnNISWtTYPYQPILHDLtpGGVgavNDSNV----Anviyptaewydl 584 888888888885567788888743422354422222....0223344555566 PP AA1.hmm 300 ..........hp..lhghdfvvv...............nfdaedeakrdtvav 325 hp lh d+++v +++++++ +rdt++v 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 585 ylanvdpagsHPyhLHALDMHIVaegkglptpqnlanaTYNTDNPLRRDTIVV 637 6667778899*************988888777666544444888888****** PP AA1.hmm 326 pkggwvvirfvadnpgvwllhchieaHlsmGl 357 p+ + +v+r++ad pg w++hchi +H++ G 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 638 PPASFIVVRLQADVPGAWIVHCHIGWHIAAGF 669 *****************************997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 251.7 0.3 2e-78 2e-78 9 280 .. 53 344 .. 48 379 .. 0.87 2 ? 0.8 0.0 0.051 0.051 94 141 .. 638 685 .. 635 693 .. 0.83 Alignments for each domain: == domain 1 score: 251.7 bits; conditional E-value: 2e-78 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknn 61 ++ +tr+yt++vte+t+a DG+ +++l++ngq+Pgp+iea+ GD+le+tv n+ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 53 EERITRTYTFNVTETTAALDGFLRPVLAINGQVPGPLIEANEGDQLEITVINH 105 56789************************************************ PP AA1_3.hmm 62 lkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefrat.qyGtsw 112 +k G ++HwHG+ q+ tn++DGv+gvtqCpi+p g s+tY+fr++ q+Gt w 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 106 MK-VGLTLHWHGLYQNGTNWEDGVTGVTQCPIPPdGGSYTYRFRTDgQFGTFW 157 98.8*****************************9789*******9769***** PP AA1_3.hmm 113 YHsHyslQyadGvlGplvinGP...asanydvdl.gpllltdwshesafelve 161 YHsH++ +adG+ Gpl+i+ P + + d d +l+l+dw+h++ +++ve 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 158 YHSHHQNLMADGINGPLIIHSPrdpLKRHTDFDQeVVLVLADWYHNTSTDIVE 210 ********************99444234445555135789************* PP AA1_3.hmm 162 eae......asggppvadniLingknkvkkskk......eeegeysevklekg 202 ++ + ++p ++ Ling +++++s++ ++ ++ e+++e+g 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 211 HMLsepgyfGTPAAPGPNSALINGIGEWNCSQAtkseqcKQINSPPEFTFEAG 263 99977776556667999*************998776655555566679***** PP AA1_3.hmm 203 kkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRyd 254 k r+rlin++v+++f +s+d+H+l+v +aD i p + ++++ gqRy 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 264 GKIRFRLINAGVHAMFFYSVDEHTLNVTEADGTGIYgPPALHRVWLHNGQRYS 316 ***********************************758899************ PP AA1_3.hmm 255 viveanqe..eenywlraelaeaCskln 280 v++++++e ++++lra+++++C ++ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 317 VVINTREEdaGRSFYLRATMDSDCWAWV 344 *****9998899************9863 PP == domain 2 score: 0.8 bits; conditional E-value: 0.051 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydv 141 +p + ++ + +a+ G H H+ a+G +G ++++ +n+++ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 638 PPASFIVVRLQADVPGAWIVHCHIGWHIAAGFAGVVIVQPDVIKNFEI 685 5666677788889999999******************99888888876 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 234.0 0.0 5.3e-73 5.3e-73 2 257 .. 76 357 .. 75 425 .. 0.90 2 ? 1.8 0.0 0.022 0.022 74 106 .. 648 679 .. 621 689 .. 0.82 Alignments for each domain: == domain 1 score: 234.0 bits; conditional E-value: 5.3e-73 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDG 54 r+v+++Ngq P p ie+n+gd++e+++ N++ + +lH+HGl+qngtn+ DG 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 76 RPVLAINGQVPGPLIEANEGDQLEITVINHM-KVGLTLHWHGLYQNGTNWEDG 127 899****************************.8899***************** PP AA1_2.hmm 55 asmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedke 106 +++vtqCpipp g ++tY+f+++ q Gt+WyHsH+++ DG+ gplii+ ++ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 128 VTGVTQCPIPPdGGSYTYRFRTDGQFGTFWYHSHHQNLMADGINGPLIIHSPR 180 *********984689************************************99 PP AA1_2.hmm 107 epy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv. 152 +p ++d+e++l+l+dwYh++s+++v+++ls+ y t a p p+s+l+ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 181 DPLkrhtDFDQEVVLVLADWYHNTSTDIVEHMLSEpgYFGTPAAPGPNSALIn 233 77766779**************************98888999*********** PP AA1_2.hmm 153 .................netenatlevepgktYllriinvgafasqylvledh 188 + ++ ++++e+g + ++r+in g+ a+++ ++++h 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 234 gigewncsqatkseqckQINSPPEFTFEAGGKIRFRLINAGVHAMFFYSVDEH 286 *************998877788899**************************** PP AA1_2.hmm 189 emtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdet 239 ++++ e+DG+ + p + + + +QRysv+++++++ + +++ l a+md++ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 287 TLNVTEADGTGIYgPPALHRVWLHNGQRYSVVINTREEdAGRSFYLRATMDSD 339 **********9972566899****************97366************ PP AA1_2.hmm 240 mldvvpddlqlnvtstlv 257 + vp+d+ql + l+ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 340 CWAWVPNDIQLTAFGILR 357 **********99887775 PP == domain 2 score: 1.8 bits; conditional E-value: 0.022 AA1_2.hmm 74 tveeqvGtYWyHsHskgqYeDGlrgpliiedke 106 ++ + G++ +H+H + + G+ g++i++++ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 648 QA-DVPGAWIVHCHIGWHIAAGFAGVVIVQPDV 679 44.6689999*******************9875 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 221.2 0.0 3.7e-69 3.7e-69 3 252 .. 71 339 .. 69 377 .. 0.88 Alignments for each domain: == domain 1 score: 221.2 bits; conditional E-value: 3.7e-69 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglf 55 DGf r + +ng++pgpli +++gd+++i+v+n+ m+ ++hwhgl+ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 71 LDGFLRPVLAINGQVPGPLIEANEGDQLEITVINH-----MKVGLTLHWHGLY 118 6********************************96.....678899******* PP AA1_1.hmm 56 qkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqycdglr 107 q+gtnw+dg++ vtqCPi p g s++y+f++++q GtfwYHsh+++ + dg+ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 119 QNGTNWEDGVTGVTQCPIPPdGGSYTYRFRTDGQFGTFWYHSHHQNLMADGIN 171 ******************99678****************************** PP AA1_1.hmm 108 Galvvydpedplkslydvddestvitladwyhtaakell............kl 148 G+l+++ p+dplk+ d+d+e v+ ladwyh++++++ + 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 172 GPLIIHSPRDPLKRHTDFDQE-VVLVLADWYHNTSTDIVehmlsepgyfgtPA 223 ******************987.6999**********99989999999998777 PP AA1_1.hmm 149 vavadstlinGlgrya...ggpeaelavvn......vekgkrYrfrlvsiscd 192 ++ ++s+linG+g ++ ++++ + +n e+g + rfrl++ + 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 224 APGPNSALINGIGEWNcsqATKSEQCKQINsppeftFEAGGKIRFRLINAGVH 276 799***********984323334445555422222278999************ PP AA1_1.hmm 193 pnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqe..vdn 242 + f +s+d+h+l+v eadg+ + p +++ + gqrysvv+++ +e + 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 277 AMFFYSVDEHTLNVTEADGTGIyGPPALHRVWLHNGQRYSVVINTREEdaGRS 329 *******************98636999*****************976511568 PP AA1_1.hmm 243 Ywiranpnlg 252 +++ra++++ 14301|Pucstr1_GeneCatalog_proteins_20170922.aa.fasta|AA1 330 FYLRATMDSD 339 9999998875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (708 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 111.96 // Query: 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 [L=681] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.7e-84 270.5 0.4 8.7e-84 270.1 0.4 1.1 1 AA1.hmm 1.5e-60 193.1 3.0 2.9e-60 192.1 3.0 1.4 1 AA1_3.hmm 1.6e-59 189.7 0.4 9.1e-58 183.9 0.7 2.8 3 AA1_2.hmm 2.7e-50 159.2 0.4 4.4e-50 158.5 0.4 1.3 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 270.1 0.4 8.7e-84 8.7e-84 7 357 .. 76 622 .. 65 623 .. 0.85 Alignments for each domain: == domain 1 score: 270.1 bits; conditional E-value: 8.7e-84 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnw 58 + ++v+++N+q+PgP+ie+negD++++tV+N++ s g+tiHwhG+ q+gt+ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 76 YFKPVLAINNQIPGPLIEVNEGDQLEITVVNRM-SLGLTIHWHGIYQNGTKL 126 56899***************************9.79***********99975 PP AA1.hmm 59 aDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGalii 109 +tqcpi+p g ++tY+f++t H+H + adG+ G++i+ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 127 -----RITQCPIPPhGGQYTYKFKIT-------EHAHQQNFMADGISGPFIV 166 .....6********9**********9.......7****************** PP AA1.hmm 110 rdpks..kekydvddeelvillsdwyhktaeell......ken..atgaepa 151 ++ ++ k+++d+d +e+v++l+dwyh+t+e+++ k t a+p 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 167 HSIRDplKRSVDFD-QEVVLFLADWYHNTSETIVhnmlteK-GyyGTPAAPS 216 *7422224489999.899****************9998642.2357778888 PP AA1.hmm 152 pdsllinGkgrlync.....s.....skle.vlkvepgktyrlrlinaalna 192 p+s+linG g+ nc s +k + ++++ +g+t r+rlin a++a 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 217 PNSALINGVGNW-NCdkatsSekcvqKKSHiQFNFVAGETIRFRLINGASHA 267 **********97.5655554155554332359******************** PP AA1.hmm 193 eltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gn 241 ++++s+d+H+l+v eaD++ v p +++ ++ + Gqry+v++k+n+++ +n 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 268 MFYYSVDEHTLNVTEADATGVYgPSNIHRIKFHNGQRYSVMIKTNKKDagKN 319 ******************998549*******************99999877* PP AA1.hmm 242 ywiraslds...a...afdnttalailrYkgassas................ 271 + +ra++ds a + + tal+i++ + s+++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 320 FFMRAQMDSdcwAwvaNDAELTALGIINLIDGSEKHhtsveledslprtidw 371 *****999977625554478899*****9664444457899999999***** PP AA1.hmm 272 .................................................... 271 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 372 kdemggecadlnssslkpilpsrvpkvavgtgtlanafgfqviltgelvprg 423 **************************************************** PP AA1.hmm 272 .................................................... 271 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 424 aastpsnatfangqnpssngssprrlvkkqvqigdddgsnipngksseqagi 475 **************************************************** PP AA1.hmm 272 ....................nvsf.vepstslleay..sgv...detka... 294 n+++ + p +++l+++ sg ++t+ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 476 sriggppptpvgtigkffvnNITWlTAPYQPILHDLigSGAgevNQTRVssv 527 *************999999999997788889998853622244555555644 PP AA1.hmm 295 .klkln.................hp..lhghdfvvv............nfda 314 + hp lh +d+++v + 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 528 tF---HtpewydlhivnldpalsHPyhLHAMDMHLVaqgkgvpnketlS--- 573 40...244455555556777788*************7666555433330... PP AA1.hmm 315 edeak..........rdtvavpkggwvvirfvadnpgvwllhchieaHlsmG 356 k rdt+++++ + +v+r+ +d pgvw+lhchi +Hl+ G 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 574 ----KleydtinplrRDTIVIEPASFAVVRILTDIPGVWILHCHIGWHLAGG 621 ....14444455555**********************************999 PP AA1.hmm 357 l 357 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 622 F 622 6 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 192.1 3.0 2.9e-60 2.9e-60 9 291 .. 55 347 .. 50 364 .. 0.88 Alignments for each domain: == domain 1 score: 192.1 bits; conditional E-value: 2.9e-60 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvkn 60 + +v r y++ vt++t+a DG+ k++l++n+q+Pgp+ie + GD+le+tv+n 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 55 DVSVKRVYKFIVTNTTAALDGYFKPVLAINNQIPGPLIEVNEGDQLEITVVN 106 67899*********************************************** PP AA1_3.hmm 61 nlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefratqyGts 111 +++ G +iHwHGi q+ t+ +tqCpi+p g ++tY+f++t+ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 107 RMS-LGLTIHWHGIYQNGTKL-----RITQCPIPPhGGQYTYKFKITE---- 148 *98.8************9996.....5******99789********99.... PP AA1_3.hmm 112 wYHsHyslQyadGvlGplvinG...Pasanydvdlg.pllltdwshesafel 159 H+H + +adG+ Gp +++ P + + d d + +l+l+dw+h++ +++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 149 --HAHQQNFMADGISGPFIVHSirdPLKRSVDFDQEvVLFLADWYHNTSETI 198 ..99**************98754448777777777515789*********** PP AA1_3.hmm 160 veeae......asggppvadniLingknkvkkskk......eeegeysevkl 199 v+++ + ++p+ ++ Ling ++++++k+ ++++ ++++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 199 VHNMLtekgyyGTPAAPSPNSALINGVGNWNCDKAtssekcVQKKSHIQFNF 250 **99976665545566999*************99899999888999999*** PP AA1_3.hmm 200 ekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligig 250 +g++ r+rlin +++++f +s+d+H+l+v +aD + p + + + + g 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 251 VAGETIRFRLINGASHAMFYYSVDEHTLNVTEADATGVYgPSNIHRIKFHNG 302 *************************************9659999******** PP AA1_3.hmm 251 qRydviveanqe..eenywlraelaeaCskl..naeekeikailr 291 qRy v++++n++ +n+++ra+++++C ++ n+ e ++ +i++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 303 QRYSVMIKTNKKdaGKNFFMRAQMDSDCWAWvaNDAELTALGIIN 347 ***********99999************99822344444555655 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.9 0.7 9.1e-58 9.1e-58 2 262 .. 78 352 .. 77 375 .. 0.90 2 ? 1.3 0.0 0.032 0.032 152 194 .. 519 561 .. 472 578 .. 0.83 3 ? -0.5 0.0 0.11 0.11 79 111 .. 605 637 .. 590 643 .. 0.84 Alignments for each domain: == domain 1 score: 183.9 bits; conditional E-value: 9.1e-58 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamD 53 ++v+++N+q P p ievn+gd++e+++ N++ ++H+HG++qngt+ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 78 KPVLAINNQIPGPLIEVNEGDQLEITVVNRM-SLGLTIHWHGIYQNGTKL-- 126 6899***************************.7899***********985.. PP AA1_2.hmm 54 GasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrgpliied 104 +tqCpipp g ++tY+f+++ H+H+++ DG+ gp+i++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 127 ---RITQCPIPPhGGQYTYKFKIT-------EHAHQQNFMADGISGPFIVHS 168 ...7******984689*******3.......5*******************9 PP AA1_2.hmm 105 keepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsl 150 ++p ++d+e++l l+dwYh++s+++v+++l++ y t a p p+s+ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 169 IRDPLkrsvDFDQEVVLFLADWYHNTSETIVHNMLTEkgYYGTPAAPSPNSA 220 887776777************************9999566778899****** PP AA1_2.hmm 151 lv..................netenatlevepgktYllriinvgafasqylv 184 l+ ++++++++++ +g+t ++r+in + a++y + 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 221 LIngvgnwncdkatssekcvQKKSHIQFNFVAGETIRFRLINGASHAMFYYS 272 ********************99****************************** PP AA1_2.hmm 185 ledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalva 234 +++h++++ e+D++ v ps+++ ++ +QRysv++k++++ + kn+ + a 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 273 VDEHTLNVTEADATGVYgPSNIHRIKFHNGQRYSVMIKTNKKdAGKNFFMRA 324 *************99853899*****************9886377******* PP AA1_2.hmm 235 kmdetmldvvpddlqlnvtstlvydksa 262 +md++ + v++d +l + ++ + 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 325 QMDSDCWAWVANDAELTALGIINLIDGS 352 ***********99999988877654444 PP == domain 2 score: 1.3 bits; conditional E-value: 0.032 AA1_2.hmm 152 vnetenatlevepgktYllriinvgafasqylvledhemtive 194 vn+t+ ++++++ + Y l+i+n+ s+ +l +m++v 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 519 VNQTRVSSVTFHTPEWYDLHIVNLDPALSHPYHLHAMDMHLVA 561 5999999999*************99999999999999998875 PP == domain 3 score: -0.5 bits; conditional E-value: 0.11 AA1_2.hmm 79 vGtYWyHsHskgqYeDGlrgpliiedkeepyey 111 G + +H+H + + G+ +++++++++ + e+ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 605 PGVWILHCHIGWHLAGGFASVVVVQPERIKSEF 637 688889*******************99866655 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 158.5 0.4 4.4e-50 4.4e-50 3 253 .. 73 330 .. 71 358 .. 0.88 Alignments for each domain: == domain 1 score: 158.5 bits; conditional E-value: 4.4e-50 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhgl 54 DG+ + + +n+++pgpli ++gd+++i+vvn+ m +ihwhg+ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 73 LDGYFKPVLAINNQIPGPLIEVNEGDQLEITVVNR-----MSLGLTIHWHGI 119 6********************************96.....678999****** PP AA1_1.hmm 55 fqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqycdg 105 +q+gt+ +tqCPi p g +++y+fk+++ H+h ++ + dg 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 120 YQNGTKL-----RITQCPIPPhGGQYTYKFKITE-------HAHQQNFMADG 159 ****986.....6******996789*******77.......89********* PP AA1_1.hmm 106 lrGalvvydpedplkslydvddestvitladwyhtaakell........... 146 + G+++v+ +dplk+ d+d+e v+ ladwyh++++++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 160 ISGPFIVHSIRDPLKRSVDFDQE-VVLFLADWYHNTSETIVhnmltekgyyg 210 ********************987.699***********99989999999997 PP AA1_1.hmm 147 .klvavadstlinGlgryagg.........peaelavvnvekgkrYrfrlvs 188 +++ ++s+linG+g ++ + ++++ + n +g+ rfrl++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 211 tPAAPSPNSALINGVGNWNCDkatssekcvQKKSHIQFNFVAGETIRFRLIN 262 777799************96644444444444456667889999******** PP AA1_1.hmm 189 iscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqe 239 ++++ f +s+d+h+l+v ead++ + p ++++i+ gqrysv++++n++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 263 GASHAMFYYSVDEHTLNVTEADATGVyGPSNIHRIKFHNGQRYSVMIKTNKK 314 **********************997637**********************97 PP AA1_1.hmm 240 v..dnYwiranpnlgk 253 +n+++ra++++ 4583668|Phapa1_GeneCatalog_proteins_20210123.aa.fasta|AA1 315 DagKNFFMRAQMDSDC 330 5226*******98765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (681 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 112.78 // Query: 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 [L=707] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-101 328.9 0.1 1.6e-101 328.4 0.1 1.2 1 AA1.hmm 1.6e-79 255.3 0.1 9.3e-79 252.8 0.2 1.9 2 AA1_3.hmm 5.3e-75 240.5 0.0 5.8e-74 237.1 0.0 2.1 2 AA1_2.hmm 1.6e-69 222.3 0.0 3.2e-69 221.4 0.0 1.5 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 328.4 0.1 1.6e-101 1.6e-101 7 357 .. 73 668 .. 62 669 .. 0.82 Alignments for each domain: == domain 1 score: 328.4 bits; conditional E-value: 1.6e-101 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlg 55 + r+v+++Ngq+PgP+ieanegD++++tV+N++ s g+t+HwhG+ q+g 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 73 FLRPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQNG 120 6799****************************9.79************* PP AA1.hmm 56 tnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGl 103 tnw+DGv gvtqcpi++ g sftY+f +++q Gt+wyHsH++ adG+ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 121 TNWEDGVTGVTQCPIPAdGGSFTYTFDLHGQFGTFWYHSHHQNLMADGI 169 ***************989******************************* PP AA1.hmm 104 rGaliirdpks..kekydvddeelvillsdwyhktaeell....ken.. 144 G+lii++p++ k+++d+d +++v++l+dwyh+t+++++ +e+ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 170 NGPLIIHSPRDplKRHVDFD-QDVVLILADWYHNTSTDIVehmlSEAgy 217 *******9966444489998.889***************9888833343 PP AA1.hmm 145 .atgaepapdsllinGkgrlyncs...........sklevlkvepgkty 181 t a+p p+s+linG g+ ncs ++ ++++++g + 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 218 fGTPAAPGPNSALINGIGEW-NCSqaskaqqckqiNPPPEFTFKAGDKI 265 45666666**********97.563344455554555556********** PP AA1.hmm 182 rlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqry 229 r+rlina+++a++++s+d+H+l+v eaDg+ v p ++ + ++ Gqry 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 266 RFRLINAGVHAMFFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRY 314 *****************************99854899************ PP AA1.hmm 230 dvllkanqsa..gnywiraslds...a....afdnttalailrYkgass 269 +v++k+++++ +++++ra++ds a + + t+ +ilr +++s 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 315 SVVIKTKKEDagKSFYLRATMDSdcwAwvpdD-IQLTGFGILRLVDDES 362 *****98888777******9999766255644.57899******77433 PP AA1.hmm 270 as............................................... 271 + 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 363 KIkkisqsqtrpqtkdwpdeilgdcidlptsslvpilkesvpnsvvgsg 411 325677777889999********************************** PP AA1.hmm 272 ................................................. 271 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 412 sfkagfgfqfinntalhltraqavklaqkvnasslslttnprteelqtt 460 ********************99999999999999999999999988888 PP AA1.hmm 272 ................................................. 271 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 461 ndtasflrngtartllnarsksveglwnldesesltalakrqvsvgqkn 509 8888888888888888888888888887777777777777777777777 PP AA1.hmm 272 ................................nvsf.vepstslleay. 286 n+s+ + p ++l+++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 510 lppgnrtnmlgitrtggppptpagtigkfflnNISWtTYPYRPVLHDLt 558 7777777777777777777777777777777766664455666666632 PP AA1.hmm 287 .sgvdetkaklkln................................hp. 301 + hp 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 559 pG-----------GvgtvngsnvanviyptsewydlylanidpagsHPy 596 32...........022233333333345555666666777888899*** PP AA1.hmm 302 .lhghdfvvv...............nfdaedeakrdtvavpkggwvvir 334 lh +d+++v ++++ ++ +rdt++vp+ + +vir 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 597 hLHAMDMHIVaegkglptpenlakvSYNTANPLRRDTIVVPPASFTVIR 645 **********877777766655544444777777*************** PP AA1.hmm 335 fvadnpgvwllhchieaHlsmGl 357 ++ad pg w++hchi +H++ G 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 646 LRADIPGAWIVHCHIGWHIAAGF 668 ********************997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 252.8 0.2 9.3e-79 9.3e-79 8 280 .. 51 343 .. 46 377 .. 0.86 2 ? -0.3 0.0 0.11 0.11 94 139 .. 637 682 .. 634 693 .. 0.80 Alignments for each domain: == domain 1 score: 252.8 bits; conditional E-value: 9.3e-79 AA1_3.hmm 8 pktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlev 56 ++ +tr+yt++vtest+a DG+ +++l++ngq+Pgp+iea+ GD+le+ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 51 TDKPKTRKYTFHVTESTAALDGFLRPVLAINGQIPGPLIEANEGDHLEI 99 56789******************************************** PP AA1_3.hmm 57 tvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefr 104 tv+n+++ G ++HwHGi q+ tn++DGv+gvtqCpi+ g sftY+f 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 100 TVVNQMS-VGLTLHWHGIYQNGTNWEDGVTGVTQCPIPAdGGSFTYTFD 147 *****98.8****************************75499******9 PP AA1_3.hmm 105 at.qyGtswYHsHyslQyadGvlGplvinGP.....asanydvdlgpll 147 + q+Gt wYHsH++ +adG+ Gpl+i+ P + ++d+d+ +l+ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 148 LHgQFGTFWYHSHHQNLMADGINGPLIIHSPrdplkRHVDFDQDV-VLI 195 755***************************954433346677665.678 PP AA1_3.hmm 148 ltdwshesafelveeae......asggppvadniLingknkvkkskk.. 188 l+dw+h++ +++ve++ + ++p ++ Ling +++++s++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 196 LADWYHNTSTDIVEHMLseagyfGTPAAPGPNSALINGIGEWNCSQAsk 244 9***********9999877765555667899*************99866 PP AA1_3.hmm 189 ....eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaD 233 ++ + e+++++g k r+rlin++v+++f +s+d+H+l+v +aD 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 245 aqqcKQINPPPEFTFKAGDKIRFRLINAGVHAMFFYSVDEHTLNVTEAD 293 5444444445569************************************ PP AA1_3.hmm 234 fvpie.pyttdslligigqRydviveanqe..eenywlraelaeaCskl 279 + p + ++++ gqRy v++++++e ++++lra+++++C ++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 294 GTGVYgPPALHRVWLHNGQRYSVVIKTKKEdaGKSFYLRATMDSDCWAW 342 ***9658899******************998899************986 PP AA1_3.hmm 280 n 280 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 343 V 343 3 PP == domain 2 score: -0.3 bits; conditional E-value: 0.11 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasany 139 +p + ++ + ra+ G H H+ a+G +G ++++ +++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 637 PPASFTVIRLRADIPGAWIVHCHIGWHIAAGFAGVVIVQPDVIKQF 682 5666666788899999999***************999986655555 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 237.1 0.0 5.8e-74 5.8e-74 2 268 .. 75 367 .. 74 389 .. 0.92 2 ? 0.8 0.0 0.043 0.043 77 106 .. 649 678 .. 635 686 .. 0.83 Alignments for each domain: == domain 1 score: 237.1 bits; conditional E-value: 5.8e-74 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtn 50 r+v+++Ngq P p ie+n+gd++e+++ N++ +lH+HG++qngtn 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 75 RPVLAINGQIPGPLIEANEGDHLEITVVNQM-SVGLTLHWHGIYQNGTN 122 899****************************.8899************* PP AA1_2.hmm 51 amDGasmvtqCpip.pgetltYeftveeqvGtYWyHsHskgqYeDGlrg 98 + DG+++vtqCpip +g ++tY+f+++ q Gt+WyHsH+++ DG+ g 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 123 WEDGVTGVTQCPIPaDGGSFTYTFDLHGQFGTFWYHSHHQNLMADGING 171 *************845899****************************** PP AA1_2.hmm 99 pliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynpt 141 plii+ +++p ++d++++l+l+dwYh++s+++v+++ls+ y t 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 172 PLIIHSPRDPLkrhvDFDQDVVLILADWYHNTSTDIVEHMLSEagYFGT 220 ******997776777***************************9666778 PP AA1_2.hmm 142 gaepipdsllv..................netenatlevepgktYllri 172 a p p+s+l+ + + ++++++g + ++r+ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 221 PAAPGPNSALIngigewncsqaskaqqckQINPPPEFTFKAGDKIRFRL 269 899*********************9998877778899************ PP AA1_2.hmm 173 invgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLv 220 in g+ a+++ ++++h++++ e+DG+ v p + + + +QRysv++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 270 INAGVHAMFFYSVDEHTLNVTEADGTGVYgPPALHRVWLHNGQRYSVVI 318 **************************9972556899************* PP AA1_2.hmm 221 kaknd.tsknyalvakmdetmldvvpddlqlnvtstlvydksaalaeas 268 k+k++ + k++ l a+md++ + vpdd+ql l+ +++++ ++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 319 KTKKEdAGKSFYLRATMDSDCWAWVPDDIQLTGFGILRLVDDESKIKKI 367 **997366***********************999998877766665554 PP == domain 2 score: 0.8 bits; conditional E-value: 0.043 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke 106 + G++ +H+H + + G+ g++i++++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 649 DIPGAWIVHCHIGWHIAAGFAGVVIVQPDV 678 5579999*******************9875 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 221.4 0.0 3.2e-69 3.2e-69 3 251 .. 70 337 .. 68 361 .. 0.88 Alignments for each domain: == domain 1 score: 221.4 bits; conditional E-value: 3.2e-69 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihw 51 DGf r + +ng++pgpli +++gd+++i+vvn+ m ++hw 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 70 LDGFLRPVLAINGQIPGPLIEANEGDHLEITVVNQ-----MSVGLTLHW 113 6********************************97.....668899*** PP AA1_1.hmm 52 hglfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshls 99 hg++q+gtnw+dg++ vtqCPi + g sf+y+f++++q GtfwYHsh++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 114 HGIYQNGTNWEDGVTGVTQCPIPAdGGSFTYTFDLHGQFGTFWYHSHHQ 162 **********************65489********************** PP AA1_1.hmm 100 tqycdglrGalvvydpedplkslydvddestvitladwyhtaakell.. 146 + + dg+ G+l+++ p+dplk+ d+d++ v+ ladwyh++++++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 163 NLMADGINGPLIIHSPRDPLKRHVDFDQD-VVLILADWYHNTSTDIVeh 210 **************************976.6899**********99989 PP AA1_1.hmm 147 ..........klvavadstlinGlgryagg...peaelavvn......v 176 +++ ++s+linG+g ++ + ++++ +n 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 211 mlseagyfgtPAAPGPNSALINGIGEWNCSqasKAQQCKQINpppeftF 259 999999998777799***********99551223333444432222228 PP AA1_1.hmm 177 ekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqi 224 ++g + rfrl++ ++ f +s+d+h+l+v eadg+ + p +++ + 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 260 KAGDKIRFRLINAGVHAMFFYSVDEHTLNVTEADGTGVyGPPALHRVWL 308 99*********************************97636999****** PP AA1_1.hmm 225 fagqrysvvleanqe..vdnYwiranpnl 251 gqrysvv+++++e + +++ra++++ 11105|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 309 HNGQRYSVVIKTKKEdaGKSFYLRATMDS 337 **********9987621468999998876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (707 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 117.47 // Query: 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 [L=637] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1e-86 279.7 0.0 1.5e-86 279.2 0.0 1.2 1 AA1.hmm 4.8e-67 214.4 0.0 1.4e-66 212.8 0.0 1.6 2 AA1_3.hmm 1e-63 203.4 0.0 7.3e-62 197.3 0.0 2.1 2 AA1_2.hmm 3.4e-61 195.0 0.0 5.6e-61 194.3 0.0 1.3 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 279.2 0.0 1.5e-86 1.5e-86 7 346 .. 68 606 .. 40 611 .. 0.83 Alignments for each domain: == domain 1 score: 279.2 bits; conditional E-value: 1.5e-86 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaD 60 + r+v+++Ngq+PgP+ieanegD++++tV N+l ++++tiHwhGl q+gtnw+D 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 68 FLRHVLAINGQIPGPLIEANEGDRLEITVINEL-EDPLTIHWHGLYQNGTNWED 120 6789*****************************.57****************** PP AA1.hmm 61 Gvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpk 113 G++g+tqcpi+p g ++tY f +++q Gt+ ++H+++ ++dG++G+lii++p+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 121 GPSGITQCPIPPsGGKYTYIFPLDKQFGTF-CNAHHDALKVDGIVGPLIIHSPR 173 ************9***************96.69******************996 PP AA1.hmm 114 s..kekydvddeelvillsdwyhktaeell.....ken...atgaepapdslli 157 + k+k d+d +e+v+l++dw+h+ ++ ++ + + ++p p+s+l+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 174 DplKRKIDFD-QEIVVLMQDWWHTMSSVIMeqlltN-QgyrGRTTAPSPSSVLM 225 6444499999.999***********99888888862.33345566777****** PP AA1.hmm 158 nGkgrlync......s....sklevlkvepgktyrlrlinaalnaeltfsidnH 201 nG g+ +c + ++ ++++ +g + r+r+ina++ a++++s dnH 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 226 NGVGAW-DCrfarttErcqkTSPPEFNLVAGSKTRFRFINAGARAMFYMSADNH 278 ****96.565665541454455569***************************** PP AA1.hmm 202 kltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa.g.nywiraslds.. 250 l+v eaD+++v p+ ++ + + Gqry+v++++ ++ g n+ +ra++++ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 279 ILNVTEADATPVYgPTGIQRVIFHNGQRYSVIVETPLEEaGiNFFLRARMNRdc 332 ***********964899*****************77766557******999966 PP AA1.hmm 251 .a....afdnttalailrYkgassas............................ 271 + + talai+r + +s+s 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 333 wPwissD-LQDTALAIVRVISPQSQSgtqksnkelptttdwtrptnetrmdldp 385 6155544.57889*****97744444677788899999999999999******* PP AA1.hmm 272 ...................................................... 271 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 386 dtlvpiipvrvpnkvagsqtlanalgfqpiatrekvrpksrptptpaalrafrm 439 ****************************************************** PP AA1.hmm 272 ...................................................nvs 274 nv+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 440 arrlsskrrqlkrlvserllplgknkttpfvtdliktipapagteprfyvnNVT 493 **9999999999999999999999999999999999999999999888888666 PP AA1.hmm 275 f.vepstsllea.ysgv....detka....klkln.................hp 301 v+p +++l++ ++g ++t+ + hp 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 494 AqVLPYQPILQDlARGGsgsvNSTRIasatF---HtvdwydlylvnmdqgidHP 544 5467888888884322234343332243330...144555556666777799** PP AA1.hmm 302 ..lhghdfvvv...............nfdaedeakrdtvavpkggwvvirfvad 338 lhg+d+++v ++++e++ +rdtv++ g+ +v r+ +d 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 545 fhLHGMDMHIVatgkgsptrenlkklRYNTENPLRRDTVVISGGSFLVARILTD 598 ***********888776665544433333777777******************* PP AA1.hmm 339 npgvwllh 346 pgvw++ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 599 LPGVWFMV 606 ******95 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 212.8 0.0 1.4e-66 1.4e-66 7 298 .. 45 356 .. 41 371 .. 0.84 2 ? -1.8 0.0 0.3 0.3 191 232 .. 516 557 .. 501 558 .. 0.80 Alignments for each domain: == domain 1 score: 212.8 bits; conditional E-value: 1.4e-66 AA1_3.hmm 7 vpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvkn 60 + +t +tr+++l+vt+++++pDG+ +++l++ngq+Pgp+iea+ GD+le+tv n 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 45 ISSTKQTRKFELRVTNTSASPDGFLRHVLAINGQIPGPLIEANEGDRLEITVIN 98 557899************************************************ PP AA1_3.hmm 61 nlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftYefra.tqyGtsw 112 +l++ +iHwHG+ q+ tn++DG +g+tqCpi+p g ++tY f +q+Gt + 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 99 ELED-PLTIHWHGLYQNGTNWEDGPSGITQCPIPPsGGKYTYIFPLdKQFGT-F 150 **95.688*************************997899*****87257887.7 PP AA1_3.hmm 113 YHsHyslQyadGvlGplvinGP...asanydvdl.gpllltdwshesafelvee 162 +H+ + dG++Gpl+i+ P + + d d ++l++dw h+ + ++e+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 151 CNAHHDALKVDGIVGPLIIHSPrdpLKRKIDFDQeIVVLMQDWWHTMSSVIMEQ 204 789999999***********99444356666666246789*****998888887 PP AA1_3.hmm 163 ae......asggppvadniLingknkvkkskk.....eeegeysevklekgkky 205 ++++p+ +++L+ng + ++++ + ++++ e++l +g k 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 205 LLtnqgyrGRTTAPSPSSVLMNGVGAWDCRFArtterCQKTSPPEFNLVAGSKT 258 7665566555667999*************88866665556666779******** PP AA1_3.hmm 206 rlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydvive 258 r+r+in+++ ++f +s d+H l+v +aD p+ p + ++ + gqRy vive 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 259 RFRFINAGARAMFYMSADNHILNVTEADATPVYgPTGIQRVIFHNGQRYSVIVE 312 ********************************758889**************** PP AA1_3.hmm 259 anqe..eenywlraelaeaCskl..naeekeikailrYeeassa 298 + e n++lra+++++C + ++ ++++ ai+r + +s+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 313 TPLEeaGINFFLRARMNRDCWPWisSDLQDTALAIVRVISPQSQ 356 98776688************886323455666677766555544 PP == domain 2 score: -1.8 bits; conditional E-value: 0.3 AA1_3.hmm 191 egeysevklekgkkyrlrlintsvdstfkfsidgHkltviaa 232 ++++++ ++++ y l l+n f++ g +++++a+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 516 STRIASATFHTVDWYDLYLVNMDQGIDHPFHLHGMDMHIVAT 557 556677888888889999999998888889999988888875 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 197.3 0.0 7.3e-62 7.3e-62 2 279 .. 70 372 .. 69 404 .. 0.88 2 ! 4.0 0.0 0.0047 0.0047 152 195 .. 503 557 .. 475 572 .. 0.81 Alignments for each domain: == domain 1 score: 197.3 bits; conditional E-value: 7.3e-62 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGa 55 r+v+++Ngq P p ie+n+gdr+e+++ N+led + ++H+HGl+qngtn+ DG+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 70 RHVLAINGQIPGPLIEANEGDRLEITVINELED-PLTIHWHGLYQNGTNWEDGP 122 899****************************55.899***************** PP AA1_2.hmm 56 smvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeep 108 s++tqCpipp g ++tY f +++q Gt+ +H+++ +DG+ gplii+ +++p 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 123 SGITQCPIPPsGGKYTYIFPLDKQFGTF-CNAHHDALKVDGIVGPLIIHSPRDP 175 ********985789*************9.689******************9988 PP AA1_2.hmm 109 y....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv.... 152 ++d+e+++ + dw+h+ s+ +++++l++ y+ +++ p p+s+l+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 176 LkrkiDFDQEIVVLMQDWWHTMSSVIMEQLLTNqgYRGRTTAPSPSSVLMngvg 229 77777************************8888567777889************ PP AA1_2.hmm 153 .............netenatlevepgktYllriinvgafasqylvledhemtiv 193 ++t+ ++++ +g + ++r+in ga a++y++ ++h +++ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 230 awdcrfarttercQKTSPPEFNLVAGSKTRFRFINAGARAMFYMSADNHILNVT 283 ***********99999999*********************************** PP AA1_2.hmm 194 evDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetmldvvp 245 e+D++ v p+ ++ + +QRysv+v++ + + n+ l a+m+++ + + 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 284 EADATPVYgPTGIQRVIFHNGQRYSVIVETPLEeAGINFFLRARMNRDCWPWIS 337 *****9963666******************9763669***************** PP AA1_2.hmm 246 ddlqlnvtstlvydksaalaeas.tvdelealdDf 279 +dlq + + ++ + +++ ++ +el ++ D+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 338 SDLQDTALAIVRVISPQSQSGTQkSNKELPTTTDW 372 **999888877655444443333144555555554 PP == domain 2 score: 4.0 bits; conditional E-value: 0.0047 AA1_2.hmm 152 v...........netenatlevepgktYllriinvgafasqylvledhemtive 194 + n+t+ a+ ++++ Y l ++n+ + + ++l + +m+iv 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 503 LqdlarggsgsvNSTRIASATFHTVDWYDLYLVNMDQGIDHPFHLHGMDMHIVA 556 445555555555999999999*******************************97 PP AA1_2.hmm 195 v 195 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 557 T 557 5 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 194.3 0.0 5.6e-61 5.6e-61 2 278 .. 64 360 .. 63 397 .. 0.85 Alignments for each domain: == domain 1 score: 194.3 bits; conditional E-value: 5.6e-61 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglf 55 spDGf r++ +ng++pgpli +++gd+++i+v+neL+d+ +ihwhgl+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 64 SPDGFLRHVLAINGQIPGPLIEANEGDRLEITVINELEDP-----LTIHWHGLY 112 7*************************************98.....58******* PP AA1_1.hmm 56 qkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYHshlstqycdglrG 108 q+gtnw+dgp+ +tqCPi p g ++y f +++q Gtf +h+ + +dg+ G 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 113 QNGTNWEDGPSGITQCPIPPsGGKYTYIFPLDKQFGTFC-NAHHDALKVDGIVG 165 ******************985789*************97.678888889***** PP AA1_1.hmm 109 alvvydpedplkslydvddestvitladwyhtaakell............klva 150 +l+++ p+dplk+ d+d+e v+ + dw+ht+++ ++ ++++ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 166 PLIIHSPRDPLKRKIDFDQEI-VVLMQDWWHTMSSVIMeqlltnqgyrgrTTAP 218 *****************9986.6679********99988999999999988889 PP AA1_1.hmm 151 vadstlinGlgrya....gg....peaelavvnvekgkrYrfrlvsiscdpnft 196 + s l+nG+g + + ++++ n +g + rfr+++ +++ f 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 219 SPSSVLMNGVGAWDcrfaRTtercQKTSPPEFNLVAGSKTRFRFINAGARAMFY 272 **********9665222233333345566789********************** PP AA1_1.hmm 197 fsidghnltvieadgvnt.kpltvdsiqifagqrysvvlea..nqevdnYwira 247 +s d+h l+v ead++ + p+ ++++ gqrysv++e+ +++ n+++ra 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 273 MSADNHILNVTEADATPVyGPTGIQRVIFHNGQRYSVIVETplEEAGINFFLRA 326 ***************98736999****999**********93345566****** PP AA1_1.hmm 248 npnlgk...ntgfegginsailrykgapeaePtt 278 +n ++ +++ ai+r + +++ t+ 37157|Croqu1_GeneCatalog_proteins_20120612.aa.fasta|AA1 327 RMNRDCwpwISSDLQDTALAIVRVISPQSQSGTQ 360 **99875554444455566777765555444444 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (637 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 105.49 // Query: WAR51721.1|AA1 [L=724] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.6e-88 285.7 0.0 6.8e-88 283.6 0.0 1.8 1 AA1.hmm 2.3e-67 215.4 0.0 2.5e-65 208.7 0.0 2.9 2 AA1_3.hmm 1.9e-60 192.7 0.0 2.7e-59 188.9 0.0 2.3 2 AA1_2.hmm 1.5e-56 179.7 0.0 3.8e-55 175.1 0.0 2.4 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 283.6 0.0 6.8e-88 6.8e-88 6 357 .. 67 686 .. 62 687 .. 0.85 Alignments for each domain: == domain 1 score: 283.6 bits; conditional E-value: 6.8e-88 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnw.................aDGvagvtqcpiap.gksft 77 + + r+v+++Ngq+PgP+i+anegD++++tV N++ s g+t+HwhGl q + +DGv gvtqcpi+p g sft WAR51721.1|AA1 67 TaaldgFLRPVLAINGQIPGPLIQANEGDRLEITVINQM-SVGLTLHWHGLYQASIQTciiiyailfgscngtnwEDGVTGVTQCPIPPdGGSFT 160 4555557799****************************9.79***********8777777999999999999999******************** PP AA1.hmm 78 YeftvteqaGtywyHsHvslqyadGlrGaliirdpks..kekydvddeelvillsdwyhktaeell....ken...atgaepapdsllinGkgrl 163 Yef++++q + + sH++ adG+ G+lii++p++ k++ d+d +e+v++l+dwyh+t+++++ +e+ t a+p ++s+linG g+ WAR51721.1|AA1 161 YEFSLHGQLSFDVFDSHHQNLMADGINGPLIIHSPRDplKRHIDFD-QEVVLMLADWYHNTSTDIVehmlSEAgyfGTPAAPGANSALINGVGEW 254 *********************************9966444499999.899***************9888833343455666669*********97 PP AA1.hmm 164 yncs...........sklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywi 244 ncs ++ ++++++g + r+rl+na+++a++++s+d+H+l+v eaDg+ v p ++ + ++ Gqry+v++k+++++ +++++ WAR51721.1|AA1 255 -NCSqaskaqeceqiHSPPEFTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEADGTGVYgPSAMHRVWLHNGQRYSVVIKTKKEDagRSFYL 348 .5633444555655644569**************************************9985499******************88888767**** PP AA1.hmm 245 raslds...a....afdnttalailrYkgassas............................................................. 271 ra++ds a + + ta +ilr + +s++ WAR51721.1|AA1 349 RATMDSdcwAwvpdD-IQLTAFGILRLVDGESKRqtistarpqtqdwpdeilgdcvdlptsslvpilqesvptsvagfggfkagfgfqfinntal 442 **9999766255644.57899******6644444578888999999************************************************* PP AA1.hmm 272 ............................................................................................... 271 WAR51721.1|AA1 443 hitraeavrlaqqanssglslttnprteeletsndlgsflrngsrtsrtllnarsktvqglwkagdfeasnhdlsrrqvlvgqddlprgnrtspl 537 ***************************************99999999999999999999999999999999999999999999999999999999 PP AA1.hmm 272 ......................nvsf.vepstslleay..sgv...detka.klkln....................hp..lhghdfvvv..... 310 n+s+ + p ++l+++ gv ++++ + hp lh d+++v WAR51721.1|AA1 538 gvtrtggppptpvgtigkfflnNISWaTYPYRPVLHDLtpGGVgavNDSNVaN---ViyptsdwydlylanidpagsHPyhLHALDMHIVaegkg 629 99999999999999999999998888566777888774342335542222231...123345555566667778889*************87777 PP AA1.hmm 311 ..........nfdaedeakrdtvavpkggwvvirfvadnpgvwllhchieaHlsmGl 357 ++++ ++ +rdt++vp+ + +v+r++ad pg w++hchi +H++ G WAR51721.1|AA1 630 lptpanlanvTYNTVNPLRRDTIVVPPASFTVLRLRADIPGAWIVHCHIGWHIAAGF 686 7766655544444667777***********************************997 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 208.7 0.0 2.5e-65 2.5e-65 9 294 .. 52 376 .. 47 394 .. 0.83 2 ? 1.1 0.0 0.039 0.039 94 141 .. 655 702 .. 650 711 .. 0.84 Alignments for each domain: == domain 1 score: 208.7 bits; conditional E-value: 2.5e-65 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkknGtsiHwHGirqln.................tneqDGvp 86 + +tr+yt++vte+t+a DG+ +++l++ngq+Pgp+i+a+ GD+le+tv n+++ G ++HwHG+ q + tn++DGv+ WAR51721.1|AA1 52 AKPKTRKYTFHVTETTAALDGFLRPVLAINGQIPGPLIQANEGDRLEITVINQMS-VGLTLHWHGLYQASiqtciiiyailfgscngTNWEDGVT 145 5679*************************************************98.8*********98532233333333333333389****** PP AA1_3.hmm 87 gvtqCpiap.gesftYefrat.qyGtswYHsHyslQyadGvlGplvinGP...asanydvdlg.pllltdwshesafelveeae......asggp 169 gvtqCpi+p g sftYef+ + q + sH++ +adG+ Gpl+i+ P + + d d + +l+l+dw+h++ +++ve++ + ++ WAR51721.1|AA1 146 GVTQCPIPPdGGSFTYEFSLHgQLSFDVFDSHHQNLMADGINGPLIIHSPrdpLKRHIDFDQEvVLMLADWYHNTSTDIVEHMLseagyfGTPAA 240 ********9789******9754888999********************99443355666666415789***********9999877776555667 PP AA1_3.hmm 170 pvadniLingknkvkkskk......eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviv 257 p a++ Ling +++++s++ e+ ++ e+++++g k r+rl+n++v+++f +s+d+H+l+v +aD + p ++ ++++ gqRy v++ WAR51721.1|AA1 241 PGANSALINGVGEWNCSQAskaqecEQIHSPPEFTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEADGTGVYgPSAMHRVWLHNGQRYSVVI 335 999*************99877766555566667****************************************9658999*************** PP AA1_3.hmm 258 eanqe..eenywlraelaeaCskl..naeekeikailrYee 294 ++++e ++++lra+++++C ++ ++ + ++ +ilr + WAR51721.1|AA1 336 KTKKEdaGRSFYLRATMDSDCWAWvpDDIQLTAFGILRLVD 376 ***998899************98733355556667776544 PP == domain 2 score: 1.1 bits; conditional E-value: 0.039 AA1_3.hmm 94 apgesftYefratqyGtswYHsHyslQyadGvlGplvinGPasanydv 141 +p + ++ + ra+ G H H+ a+G +G +v++ a +++++ WAR51721.1|AA1 655 PPASFTVLRLRADIPGAWIVHCHIGWHIAAGFAGVVVVQPDAIKEFQI 702 5666677788999999999*******************9888887765 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 188.9 0.0 2.7e-59 2.7e-59 2 267 .. 75 383 .. 74 440 .. 0.91 2 ? 1.0 0.0 0.039 0.039 77 107 .. 667 698 .. 653 709 .. 0.79 Alignments for each domain: == domain 1 score: 188.9 bits; conditional E-value: 2.7e-59 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngt.................namDGasmvtqCpipp.getltYeftveeq 78 r+v+++Ngq P p i++n+gdr+e+++ N++ +lH+HGl+q + n+ DG+++vtqCpipp g ++tYef+++ q WAR51721.1|AA1 75 RPVLAINGQIPGPLIQANEGDRLEITVINQM-SVGLTLHWHGLYQASIqtciiiyailfgscngtNWEDGVTGVTQCPIPPdGGSFTYEFSLHGQ 168 899****************************.8899*********988889*************9**************984689*******999 PP AA1_2.hmm 79 vGtYWyHsHskgqYeDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk..ynptgaepipdsllv............... 152 + sH+++ DG+ gplii+ +++p ++d+e++l+l+dwYh++s+++v+++ls+ y t a p +s+l+ WAR51721.1|AA1 169 LSFDVFDSHHQNLMADGINGPLIIHSPRDPLkrhiDFDQEVVLMLADWYHNTSTDIVEHMLSEagYFGTPAAPGANSALIngvgewncsqaskaq 263 999999********************997777778***************************955556778888899999*************99 PP AA1_2.hmm 153 ...netenatlevepgktYllriinvgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalvakmdetmld 242 + ++ ++++++g + ++r++n g+ a+++ ++++h++++ e+DG+ v ps ++ + + +QRysv++k+k++ + +++ l a+md++ + WAR51721.1|AA1 264 eceQIHSPPEFTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEADGTGVYgPSAMHRVWLHNGQRYSVVIKTKKEdAGRSFYLRATMDSDCWA 358 8876677789***************************************99638889*****************997366*************** PP AA1_2.hmm 243 vvpddlqlnvtstlvydksaalaea 267 vpdd+ql + l+ + +++ ++ WAR51721.1|AA1 359 WVPDDIQLTAFGILRLVDGESKRQT 383 ********99998887666555544 PP == domain 2 score: 1.0 bits; conditional E-value: 0.039 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedke.e 107 + G++ +H+H + + G+ g+++++++ + WAR51721.1|AA1 667 DIPGAWIVHCHIGWHIAAGFAGVVVVQPDAiK 698 5579999********************98743 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 175.1 0.0 3.8e-55 3.8e-55 3 252 .. 70 355 .. 68 392 .. 0.82 2 ? -3.2 0.0 0.78 0.78 85 113 .. 665 693 .. 653 698 .. 0.78 Alignments for each domain: == domain 1 score: 175.1 bits; conditional E-value: 3.8e-55 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfqk.................gtnwadgpafvtqCPiap.gnsf 79 DGf r + +ng++pgpli++++gd+++i+v+n+++ ++hwhgl+q+ gtnw+dg++ vtqCPi p g sf WAR51721.1|AA1 70 LDGFLRPVLAINGQIPGPLIQANEGDRLEITVINQMS-----VGLTLHWHGLYQAsiqtciiiyailfgscnGTNWEDGVTGVTQCPIPPdGGSF 159 6********************************9864.....5556666666554222222222222222227889************99678** PP AA1_1.hmm 80 lydfkvpdqaGtfwYHshlstqycdglrGalvvydpedplkslydvddestvitladwyhtaakell............klvavadstlinGlgr 162 +y+f++++q + sh+++ + dg+ G+l+++ p+dplk+ d+d+e v++ladwyh++++++ +++ a+s+linG+g WAR51721.1|AA1 160 TYEFSLHGQLSFDVFDSHHQNLMADGINGPLIIHSPRDPLKRHIDFDQE-VVLMLADWYHNTSTDIVehmlseagyfgtPAAPGANSALINGVGE 253 ***********99*********************************987.699***********99989999999997777799*********** PP AA1_1.hmm 163 yagg...peaelavv......nvekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqevd..nYwi 245 ++ + +++e + + ++g + rfrlv+ ++ f +s+d+h+l+v eadg+ + p ++++ + gqrysvv+++++e + +++ WAR51721.1|AA1 254 WNCSqasKAQECEQIhsppefTFKAGDKIRFRLVNAGVHAMFFYSVDEHTLNVTEADGTGVyGPSAMHRVWLHNGQRYSVVIKTKKEDAgrSFYL 348 9955122333344432222226899*********************************976379*******************988653238999 PP AA1_1.hmm 246 ranpnlg 252 ra++++ WAR51721.1|AA1 349 RATMDSD 355 9998865 PP == domain 2 score: -3.2 bits; conditional E-value: 0.78 AA1_1.hmm 85 vpdqaGtfwYHshlstqycdglrGalvvy 113 +d G++ H h+ g G +vv WAR51721.1|AA1 665 RADIPGAWIVHCHIGWHIAAGFAGVVVVQ 693 4677899999**************99995 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (724 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 44.48 // Query: 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 [L=513] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.4e-46 144.6 0.0 9.2e-26 78.8 0.0 2.1 2 AA1_3.hmm 8.5e-45 141.9 0.0 1.8e-26 81.6 0.0 2.1 2 AA1.hmm 3.2e-33 103.2 0.0 2.8e-20 60.6 0.0 2.2 2 AA1_2.hmm 5.1e-31 95.9 0.0 4.7e-19 56.6 0.0 2.2 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 63.7 0.0 3.5e-21 3.5e-21 12 80 .. 61 128 .. 54 131 .. 0.92 2 ! 78.8 0.0 9.2e-26 9.2e-26 166 300 .. 158 302 .. 135 314 .. 0.82 Alignments for each domain: == domain 1 score: 63.7 bits; conditional E-value: 3.5e-21 AA1_3.hmm 12 vtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvkn 60 +tr+++l+vt++t+a DG+ +++l++ngq+Pgp+iea+ GD+le+tvkn 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 61 TTRTFNLTVTQTTAALDGFLRPVLAINGQIPGPLIEANEGDRLEITVKN 109 79**********************************************9 PP AA1_3.hmm 61 nlkknGtsiHwHGirqlntn 80 ++ ++HwHG+ q ++n 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 110 LMD-TPLTMHWHGLYQASQN 128 876.6789*******98876 PP == domain 2 score: 78.8 bits; conditional E-value: 9.2e-26 AA1_3.hmm 166 sggppvadniLingknkvkkskk......eeegeysevklekgkkyrlr 208 + ++p a++ Ling +++++s + ++ ++ e+++++g++ r+r 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 158 TPAAPGANSALINGVGEWNCSLAttsqqcKQVSSPPEFTVTAGQRIRFR 206 4667889*************988777666566666779*********** PP AA1_3.hmm 209 lintsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydvi 256 lin++v+++f +s+d+H l++ +aD pi p + +++++ gqRy vi 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 207 LINSGVHAMFFYSVDEHMLNITEADSTPIYgPSDFRHIWLHNGQRYSVI 255 *****************************759999************** PP AA1_3.hmm 257 veanqe..eenywlraelaeaCskl..naeekeikailrYeeassaep 300 v++++e +++ +ra+++++C ++ n+ ++++ +ilr ++++ +p 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 256 VQTKKEdaGRSFHMRATMDSDCWAWipNDIQDTAFGILRVVNEDT-KP 302 ****998899************99855677888899999888776.34 PP >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 58.7 0.0 1.6e-19 1.6e-19 6 57 .. 73 128 .. 68 140 .. 0.88 2 ! 81.6 0.0 1.8e-26 1.8e-26 131 280 .. 144 312 .. 132 487 .. 0.74 Alignments for each domain: == domain 1 score: 58.7 bits; conditional E-value: 1.6e-19 AA1.hmm 6 k.....versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwh 49 + + r+v+++Ngq+PgP+ieanegD++++tV+N + ++++t+Hwh 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 73 TaaldgFLRPVLAINGQIPGPLIEANEGDRLEITVKNLM-DTPLTMHWH 120 4555567899****************************9.78******* PP AA1.hmm 50 Glrqlgtn 57 Gl q +n 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 121 GLYQASQN 128 ****8877 PP == domain 2 score: 81.6 bits; conditional E-value: 1.8e-26 AA1.hmm 131 dwyhktaeellken.atgaepapdsllinGkgrlync.....s...... 167 d +h+ +e t a+p ++s+linG g+ nc s 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 144 DIVHELLSEAG--HiGTPAAPGANSALINGVGEW-NCslattSqqckqv 189 44444444333..2356778889*********97.56455441455456 PP AA1.hmm 168 sklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvk.p 215 s+ +++v++g++ r+rlin +++a++++s+d+H l++ eaD +++ p 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 190 SSPPEFTVTAGQRIRFRLINSGVHAMFFYSVDEHMLNITEADSTPIYgP 238 55569****************************************9659 PP AA1.hmm 216 yevdslqiapGqrydvllkanqsa..gnywiraslds...a....afdn 255 + ++ ++ Gqry+v++++++++ +++ +ra++ds a + + 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 239 SDFRHIWLHNGQRYSVIVQTKKEDagRSFHMRATMDSdcwAwipnD-IQ 286 *******************88888767******9999666255534.57 PP AA1.hmm 256 ttalailrYkgassas.nvsfvepst 280 ta +ilr ++++++ ++s + p+t 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 287 DTAFGILRVVNEDTKPeKISKARPKT 312 88899999966444433344444433 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.6 0.0 3.5e-14 3.5e-14 2 51 .. 81 129 .. 80 135 .. 0.94 2 ! 60.6 0.0 2.8e-20 2.8e-20 127 267 .. 142 304 .. 133 342 .. 0.83 Alignments for each domain: == domain 1 score: 40.6 bits; conditional E-value: 3.5e-14 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtn 50 r+v+++Ngq P p ie+n+gdr+e++++N + d++ ++H+HGl+q ++n 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 81 RPVLAINGQIPGPLIEANEGDRLEITVKNLM-DTPLTMHWHGLYQASQN 128 899**************************99.99***********9998 PP AA1_2.hmm 51 a 51 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 129 I 129 6 PP == domain 2 score: 60.6 bits; conditional E-value: 2.8e-20 AA1_2.hmm 127 skelvkeflskynptg..aepipdsllv..................net 155 s+++v+e+ls++ g a p +s+l+ + + 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 142 SSDIVHELLSEAGHIGtpAAPGANSALIngvgewncslattsqqckQVS 190 6677777777755544115566677777888888888888887777777 PP AA1_2.hmm 156 enatlevepgktYllriinvgafasqylvledhemtivevDGvdve.ps 203 + +++v++g++ ++r+in g+ a+++ ++++h ++i e+D++ + ps 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 191 SPPEFTVTAGQRIRFRLINSGVHAMFFYSVDEHMLNITEADSTPIYgPS 239 77899**************************************985388 PP AA1_2.hmm 204 evdslyiavaQRysvLvkaknd.tsknyalvakmdetmldvvpddlqln 251 ++ + +QRysv+v++k++ + +++++ a+md++ + +p+d+q 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 240 DFRHIWLHNGQRYSVIVQTKKEdAGRSFHMRATMDSDCWAWIPNDIQDT 288 9******************997366**********************99 PP AA1_2.hmm 252 vtstlvydksaalaea 267 + l+ ++ +++e+ 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 289 AFGILRVVNEDTKPEK 304 9888877666665554 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.3 0.0 3.6e-13 3.6e-13 3 61 .. 76 129 .. 74 140 .. 0.90 2 ! 56.6 0.0 4.7e-19 4.7e-19 147 253 .. 159 277 .. 136 312 .. 0.74 Alignments for each domain: == domain 1 score: 37.3 bits; conditional E-value: 3.6e-13 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihw 51 DGf r + +ng++pgpli +++gd+++i+v+n + + ++hw 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 76 LDGFLRPVLAINGQIPGPLIEANEGDRLEITVKNLM-----DTPLTMHW 119 6*******************************9864.....556789** PP AA1_1.hmm 52 hglfqkgtnw 61 hgl+q+++n+ 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 120 HGLYQASQNI 129 *****99986 PP == domain 2 score: 56.6 bits; conditional E-value: 4.7e-19 AA1_1.hmm 147 klvavadstlinGlgrya...ggpeaelav......vnvekgkrYrfrl 186 +++ a+s+linG+g ++ ++++++ +v++g+r rfrl 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 159 PAAPGANSALINGVGEWNcslATTSQQCKQvssppeFTVTAGQRIRFRL 207 566899**********9944423333333311122268*********** PP AA1_1.hmm 187 vsiscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvl 234 ++ ++ f +s+d+h l++ ead++ + p + +i + gqrysv++ 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 208 INSGVHAMFFYSVDEHMLNITEADSTPIyGPSDFRHIWLHNGQRYSVIV 256 **************************86369****************** PP AA1_1.hmm 235 eanqevd..nYwiranpnlgk 253 ++++e + + +ra++++ 11090|Pgt_Ug99_A1_GeneCatalog_proteins_20191003.aa.fasta|AA1 257 QTKKEDAgrSFHMRATMDSDC 277 *98865323899999998766 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (513 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 48.87 // Query: 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 [L=613] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.8e-68 219.7 0.0 4.1e-68 218.6 0.0 1.4 1 AA1.hmm 3.4e-52 165.6 2.9 1.4e-51 163.5 2.9 1.9 1 AA1_3.hmm 1.2e-43 137.4 1.0 6.1e-42 131.8 0.7 3.0 3 AA1_2.hmm 3.4e-40 126.1 0.5 2.1e-39 123.5 0.5 2.0 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 218.6 0.0 4.1e-68 4.1e-68 7 348 .. 76 562 .. 65 567 .. 0.81 Alignments for each domain: == domain 1 score: 218.6 bits; conditional E-value: 4.1e-68 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrq 53 + ++v+++N+q+PgP+ie+negD++++tV+N++ s g+tiHwhG 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 76 YFKPVLAINNQIPGPLIEVNEGDQLEITVVNRM-SLGLTIHWHG--- 118 56899***************************9.79*******9... PP AA1.hmm 54 lgtnwaDGvagvtqcpiap.gksftYeftvteqaGtywyHsHvslqy 99 +tqcpi+p g ++tY+f++t H+H + 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 119 -----------ITQCPIPPhGGQYTYKFKIT-------EHAHQQNFM 147 ...........589*****9**********9.......7******** PP AA1.hmm 100 adGlrGaliirdpks..kekydvddeelvillsdwyhktaeellken 144 adG+ G++i+++ ++ k+++d+d +e v+l s+ + ++ + 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 148 ADGISGPFIVHSIRDplKRSVDFD-QE-VVLTSETIVHNMLTEKGYY 192 ***********7433224478988.55.6666666665555444345 PP AA1.hmm 145 atgaepapdsllinGkgrlync.....s.....skle.vlkvepgkt 180 t a+p p+s+linG g+ nc s +k + ++++ +g+t 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 193 GTPAAPSPNSALINGVGNW-NCdkatsSekcvqKKSHiQFNFVAGET 238 7999999**********97.5655554155554332359******** PP AA1.hmm 181 yrlrlinaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapG 226 r+rlin a++a++++s+d+H+l+v eaD++ v p +++ ++ + G 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 239 IRFRLINGASHAMFYYSVDEHTLNVTEADATGVYgPSNIHRIKFHNG 285 ******************************998549*********** PP AA1.hmm 227 qrydvllkanqsa..gnywiraslds...a...afdnttalailrYk 265 qry+v++k+n+++ +n+ +ra++ds a + + tal+i++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 286 QRYSVMIKTNKKDagKNFFMRAQMDSdcwAwvaNDAELTALGIINLI 332 ********99999877******999977625554478899*****96 PP AA1.hmm 266 gassas......................................... 271 + s+++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 333 DGSEKHhtsveledslprtidwkdemggecadlnssslkpilpsrvp 379 644444578999999999999999999******************** PP AA1.hmm 272 ............................................... 271 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 380 kvavgtgtlanafgfqviltgelvprgaastpsnatsangqnpssng 426 ***************************99999999999999999999 PP AA1.hmm 272 ...................nvsfvepstslleay..sgv...detka 294 n+ + p +++l+++ sg ++t+ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 427 ssprrlvkkqvqigdddgsNIPNAAPYQPILHDLigSGAgevNQTRV 473 99999999999999999887777888888887743522243454444 PP AA1.hmm 295 ....klkln.................hp..lhghdfvvv........ 310 + hp lh +d+++v 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 474 ssvtF---HtpewydlhivnldpalsHPyhLHAMDMHLVaqgkgvpn 517 54440...244555555556677788*************76665554 PP AA1.hmm 311 ....nfdaedeak..........rdtvavpkggwvvirfvadnpgvw 343 + k rdt+++++ + +v+r+ +d pgvw 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 518 ketlS-------KleydtinplrRDTIVIEPASFAVVRILTDIPGVW 557 33330.......14444455555************************ PP AA1.hmm 344 llhch 348 +lhc 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 558 ILHCF 562 ****5 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 163.5 2.9 1.4e-51 1.4e-51 9 291 .. 55 330 .. 50 347 .. 0.88 Alignments for each domain: == domain 1 score: 163.5 bits; conditional E-value: 1.4e-51 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtle 55 + +v r y++ vt++t+a DG+ k++l++n+q+Pgp+ie + GD+le 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 55 DVSVKRVYKFIVTNTTAALDGYFKPVLAINNQIPGPLIEVNEGDQLE 101 67899****************************************** PP AA1_3.hmm 56 vtvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiap.gesftY 101 +tv+n+++ G +iHwHG +tqCpi+p g ++tY 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 102 ITVVNRMS-LGLTIHWHG--------------ITQCPIPPhGGQYTY 133 ******98.8*******7..............69****99789**** PP AA1_3.hmm 102 efratqyGtswYHsHyslQyadGvlGplvinG...Pasanydvdlgp 145 +f++t+ H+H + +adG+ Gp +++ P + + d d ++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 134 KFKITE------HAHQQNFMADGISGPFIVHSirdPLKRSVDFDQEV 174 ****99......99**************9875444999*******99 PP AA1_3.hmm 146 llltdwshesafelveeaeasggppvadniLingknkvkkskk.... 188 +l ++ +++ + + ++p+ ++ Ling ++++++k+ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 175 VLTSETIVHNMLTEKGYYG-TPAAPSPNSALINGVGNWNCDKAtsse 220 9999987776665555544.78999***************9989999 PP AA1_3.hmm 189 ..eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaD 233 ++++ ++++ +g++ r+rlin +++++f +s+d+H+l+v +aD 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 221 kcVQKKSHIQFNFVAGETIRFRLINGASHAMFYYSVDEHTLNVTEAD 267 9888999999************************************* PP AA1_3.hmm 234 fvpie.pyttdslligigqRydviveanqe..eenywlraelaeaCs 277 + p + + + + gqRy v++++n++ +n+++ra+++++C 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 268 ATGVYgPSNIHRIKFHNGQRYSVMIKTNKKdaGKNFFMRAQMDSDCW 314 ***9659999*******************99999************9 PP AA1_3.hmm 278 kl..naeekeikailr 291 ++ n+ e ++ +i++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 315 AWvaNDAELTALGIIN 330 9822344444555655 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.4 0.0 0.42 0.42 137 180 .. 32 74 .. 21 78 .. 0.76 2 ! 131.8 0.7 6.1e-42 6.1e-42 2 262 .. 78 335 .. 77 358 .. 0.88 3 ? 1.7 0.0 0.023 0.023 152 194 .. 462 510 .. 414 527 .. 0.81 Alignments for each domain: == domain 1 score: -2.4 bits; conditional E-value: 0.42 AA1_2.hmm 137 kynptgaepipdsllvnetenatlevepgktYllriinvgafas 180 +++p++a p ++ ++ + n+t +v+ ++ Y++ + n++a 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 32 NSEPQTASPKSQEYILSPKFNIT-DVSVKRVYKFIVTNTTAALD 74 36788999999999999888886.89999999999999988765 PP == domain 2 score: 131.8 bits; conditional E-value: 6.1e-42 AA1_2.hmm 2 rrvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqng 48 ++v+++N+q P p ievn+gd++e+++ N++ ++H+HG 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 78 KPVLAINNQIPGPLIEVNEGDQLEITVVNRM-SLGLTIHWHG----- 118 6899***************************.7899*****9..... PP AA1_2.hmm 49 tnamDGasmvtqCpipp.getltYeftveeqvGtYWyHsHskgqYeD 94 +tqCpipp g ++tY+f+++ H+H+++ D 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 119 ---------ITQCPIPPhGGQYTYKFKIT-------EHAHQQNFMAD 149 .........69****984689*******3.......5********** PP AA1_2.hmm 95 Glrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflsk 137 G+ gp+i++ ++p ++d+e++lt s+++v+++l++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 150 GISGPFIVHSIRDPLkrsvDFDQEVVLT--------SETIVHNMLTE 188 **********987776766999999886........45666666665 PP AA1_2.hmm 138 ..ynptgaepipdsllv..................netenatlevep 164 y t a p p+s+l+ ++++++++++ + 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 189 kgYYGTPAAPSPNSALIngvgnwncdkatssekcvQKKSHIQFNFVA 235 346678899**************************99********** PP AA1_2.hmm 165 gktYllriinvgafasqylvledhemtivevDGvdve.psevdslyi 210 g+t ++r+in + a++y ++++h++++ e+D++ v ps+++ ++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 236 GETIRFRLINGASHAMFYYSVDEHTLNVTEADATGVYgPSNIHRIKF 282 *********************************99853899****** PP AA1_2.hmm 211 avaQRysvLvkaknd.tsknyalvakmdetmldvvpddlqlnvtstl 256 +QRysv++k++++ + kn+ + a+md++ + v++d +l + + 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 283 HNGQRYSVMIKTNKKdAGKNFFMRAQMDSDCWAWVANDAELTALGII 329 ***********9886377******************99999988877 PP AA1_2.hmm 257 vydksa 262 + + 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 330 NLIDGS 335 654444 PP == domain 3 score: 1.7 bits; conditional E-value: 0.023 AA1_2.hmm 152 v......netenatlevepgktYllriinvgafasqylvledhemti 192 n+t+ ++++++ + Y l+i+n+ s+ +l +m++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 462 GsgagevNQTRVSSVTFHTPEWYDLHIVNLDPALSHPYHLHAMDMHL 508 24444449999999****************99999999999999988 PP AA1_2.hmm 193 ve 194 v 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 509 VA 510 85 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 123.5 0.5 2.1e-39 2.1e-39 3 252 .. 73 312 .. 71 329 .. 0.86 Alignments for each domain: == domain 1 score: 123.5 bits; conditional E-value: 2.1e-39 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsi 49 DG+ + + +n+++pgpli ++gd+++i+vvn+ m +i 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 73 LDGYFKPVLAINNQIPGPLIEVNEGDQLEITVVNR-----MSLGLTI 114 6********************************96.....678999* PP AA1_1.hmm 50 hwhglfqkgtnwadgpafvtqCPiap.gnsflydfkvpdqaGtfwYH 95 hwhg+ tqCPi p g +++y+fk+++ H 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 115 HWHGI--------------TQCPIPPhGGQYTYKFKITE-------H 140 ***95..............89***996789*******77.......8 PP AA1_1.hmm 96 shlstqycdglrGalvvydpedplkslydvddestvitladwyhtaa 142 +h ++ + dg+ G+++v+ +dplk+ d+d+e v+t h++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 141 AHQQNFMADGISGPFIVHSIRDPLKRSVDFDQE-VVLTSETIVHNML 186 9*****************************988.5777777777766 PP AA1_1.hmm 143 kell....klvavadstlinGlgryagg.........peaelavvnv 176 +e +++ ++s+linG+g ++ + ++++ + n 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 187 TEKGyygtPAAPSPNSALINGVGNWNCDkatssekcvQKKSHIQFNF 233 5554466677899************9664444444444445666788 PP AA1_1.hmm 177 ekgkrYrfrlvsiscdpnftfsidghnltvieadgvnt.kpltvdsi 222 +g+ rfrl++ ++++ f +s+d+h+l+v ead++ + p ++++i 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 234 VAGETIRFRLINGASHAMFYYSVDEHTLNVTEADATGVyGPSNIHRI 280 9999******************************997637******* PP AA1_1.hmm 223 qifagqrysvvleanqev..dnYwiranpnlg 252 + gqrysv++++n++ +n+++ra++++ 4193683|PpacPPUFV02_GeneCatalog_proteins_20210128.aa.fasta|AA1 281 KFHNGQRYSVMIKTNKKDagKNFFMRAQMDSD 312 ***************975226******99875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (613 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01 # Mc/sec: 44.92 // Query: 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 [L=553] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-53 170.8 0.0 2.9e-53 169.7 0.0 1.5 1 AA1.hmm 1e-35 111.4 0.0 5.9e-35 108.9 0.0 1.9 2 AA1_2.hmm 3.5e-35 109.7 0.0 9.6e-35 108.3 0.0 1.6 2 AA1_3.hmm 2.4e-33 103.6 0.1 5.2e-33 102.4 0.0 1.5 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 169.7 0.0 2.9e-53 2.9e-53 99 356 .. 9 513 .. 4 515 .. 0.84 Alignments for each domain: == domain 1 score: 169.7 bits; conditional E-value: 2.9e-53 AA1.hmm 99 yadGlrGaliirdpks..kekydvddeelvillsdwyhktaeell....ken. 144 adG+ G++ii++p++ k++ d+d +++v++++dwyh+t+++++ +e+ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 9 MADGINGPMIIHSPRDplKRSIDFD-HDVVLMMADWYHNTSSDIVqemlSEAg 60 69**********9966444499998.788***************988773334 PP AA1.hmm 145 ..atgaepapdsllinGkgrlync....s.......sklevlkvepgktyrlr 184 t a+p ++ +linG g+ nc + ++ +++v++g++ r+r 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 61 yfGTPAAPGANCALINGVGQW-NCslatTtqqcnqvTSPPEFTVTAGQRIRFR 112 3455556669*********97.5635440445546655569************ PP AA1.hmm 185 linaalnaeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkan 236 lina+++a+++fs+d+H l++ eaD + + p + ++ ++ Gqry+v+++++ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 113 LINAGVHAMFFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTK 165 **************************998549*******************98 PP AA1.hmm 237 qsa..gnywiraslds...a....afdnttalailrYkgassas......... 271 +++ +n+++ra+++s a + + tal+ilr +++ + 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 166 EEDvdRNFYMRATMNSdcwAwvpnD-IQDTALGILRLAHDDARPenvskarpd 217 888767******9998676255534.68899******8855444677888999 PP AA1.hmm 272 ..................................................... 271 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 218 tqgwpqdfpqecididpslmvpilkstvpasvvgsgtfqagfgfqlinntaeh 270 999************************************************** PP AA1.hmm 272 ..................................................... 271 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 271 ltreeavrlakeahhdssrdpnlrgkkkyvtishrakhyrdrsdgsaedlhdv 323 ***************************************************** PP AA1.hmm 272 ..................................................... 271 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 324 crvpatfhgkgggyqensssrhaavdtgqeknrqhnpqrfggrkspagitrla 376 ********************999999999999999999999999999999999 PP AA1.hmm 272 ................nvsf.vepstslleay..sgv.........detkakl 296 nvs+ + p +++l+++ gv + 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 377 gppptpagtigkyfvnNVSWtTFPYQPVLHDLtpGGVgtingsrvaN------ 423 99999999999999999999678899999885353335443332220...... PP AA1.hmm 297 kln.............hp....lhghdfvvv...............nfdaede 317 h h +d+++v ++++e++ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 424 --VifptaewydlylfHGieltWHAMDMHIVaygrgfptpeklskiKYSTENP 474 ..123333444555555445568889999986666555555444333338888 PP AA1.hmm 318 akrdtvavpkggwvvirfvadnpgvwllhchieaHlsmG 356 +rdtv+vp+ + vv+r++ad pg w++hchi +H++ G 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 475 LRRDTVVVPSASFVVVRLNADIPGAWIMHCHIGWHIAGG 513 88**********************************998 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 108.9 0.0 5.9e-35 5.9e-35 93 267 .. 10 210 .. 6 251 .. 0.89 2 ? -0.2 0.0 0.087 0.087 77 105 .. 495 523 .. 481 533 .. 0.84 Alignments for each domain: == domain 1 score: 108.9 bits; conditional E-value: 5.9e-35 AA1_2.hmm 93 eDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflskynpt 141 DG+ gp+ii+ +++p ++d++++l+++dwYh++s+++v+e+ls++ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 10 ADGINGPMIIHSPRDPLkrsiDFDHDVVLMMADWYHNTSSDIVQEMLSEAGYF 62 6***********998887788****************************6665 PP AA1_2.hmm 142 g..aepipdsllv..................netenatlevepgktYllriin 174 g a p + +l+ + t+ +++v++g++ ++r+in 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 63 GtpAAPGANCALIngvgqwncslatttqqcnQVTSPPEFTVTAGQRIRFRLIN 115 5005666666777**************99977788899*************** PP AA1_2.hmm 175 vgafasqylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd. 225 g+ a++++++++h ++i e+D++ + ps ++ + +QRysv+v++k++ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 116 AGVHAMFFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTKEEd 168 ***********************98853889*******************975 PP AA1_2.hmm 226 tsknyalvakmdetmldvvpddlqlnvtstlvydksaalaea 267 ++n+ + a+m+++ + vp+d+q + l+ +++ a +e+ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 169 VDRNFYMRATMNSDCWAWVPNDIQDTALGILRLAHDDARPEN 210 89***********************99999998888777765 PP == domain 2 score: -0.2 bits; conditional E-value: 0.087 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgpliiedk 105 + G++ +H+H + + G g+++++++ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 495 DIPGAWIMHCHIGWHIAGGYAGVVVVQPD 523 4579999*******************987 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 108.3 0.0 9.6e-35 9.6e-35 122 301 .. 10 209 .. 7 221 .. 0.84 2 ? -2.2 0.0 0.42 0.42 104 132 .. 493 521 .. 482 543 .. 0.74 Alignments for each domain: == domain 1 score: 108.3 bits; conditional E-value: 9.6e-35 AA1_3.hmm 122 adGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae..... 164 adG+ Gp++i+ P s ++d+d+ +l+++dw+h++ +++v+e+ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 10 ADGINGPMIIHSPrdplkRSIDFDHDV-VLMMADWYHNTSSDIVQEMLseagy 61 79**********955544467777775.6899***********9999877765 PP AA1_3.hmm 165 .asggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrli 210 + ++p a+ Ling +++++s + ++ ++ e+++++g++ r+rli 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 62 fGTPAAPGANCALINGVGQWNCSLAtttqqcNQVTSPPEFTVTAGQRIRFRLI 114 55566689999***********988666665555666679************* PP AA1_3.hmm 211 ntsvdstfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe 262 n++v+++f fs+d+H l++ +aD i p + +++++ gqRy viv++++e 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 115 NAGVHAMFFFSVDEHMLNITEADSTGIYgPSDFRHIWLHNGQRYSVIVQTKEE 167 ***************************659999*******************9 PP AA1_3.hmm 263 ..eenywlraelaeaCskl..naeekeikailrYeeassaept 301 ++n+++ra+++++C ++ n+ ++++ +ilr ++++ p+ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 168 dvDRNFYMRATMNSDCWAWvpNDIQDTALGILRLAHDDA-RPE 209 999*************99855677888899999877765.444 PP == domain 2 score: -2.2 bits; conditional E-value: 0.42 AA1_3.hmm 104 ratqyGtswYHsHyslQyadGvlGplvin 132 +a+ G H H+ a G +G +v++ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 493 NADIPGAWIMHCHIGWHIAGGYAGVVVVQ 521 55555777788888888888888888876 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 102.4 0.0 5.2e-33 5.2e-33 103 267 .. 10 200 .. 5 219 .. 0.80 2 ? -3.0 0.0 0.68 0.68 75 113 .. 483 521 .. 481 523 .. 0.79 Alignments for each domain: == domain 1 score: 102.4 bits; conditional E-value: 5.2e-33 AA1_1.hmm 103 cdglrGalvvydpedplkslydvddestvitladwyhtaakell......... 146 dg+ G+++++ p+dplk+ d+d++ v+++adwyh++++++ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 10 ADGINGPMIIHSPRDPLKRSIDFDHD-VVLMMADWYHNTSSDIVqemlseagy 61 7**********************986.799**********9998899999999 PP AA1_1.hmm 147 ...klvavadstlinGlgrya...ggpeaelavv......nvekgkrYrfrlv 187 +++ a+ +linG+g+++ ++++++ v +v++g+r rfrl+ 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 62 fgtPAAPGANCALINGVGQWNcslATTTQQCNQVtsppefTVTAGQRIRFRLI 114 977777999**********9954434444443332222228************ PP AA1_1.hmm 188 siscdpnftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqe 239 + ++ f fs+d+h l++ ead++ + p + +i + gqrysv++++++e 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 115 NAGVHAMFFFSVDEHMLNITEADSTGIyGPSDFRHIWLHNGQRYSVIVQTKEE 167 ************************976379******************99765 PP AA1_1.hmm 240 .vd.nYwiranpnlgk...ntgfegginsailr 267 vd n+++ra++n+ + +++ ilr 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 168 dVDrNFYMRATMNSDCwawVPNDIQDTALGILR 200 2445********998744433333444445555 PP == domain 2 score: -3.0 bits; conditional E-value: 0.68 AA1_1.hmm 75 pgnsflydfkvpdqaGtfwYHshlstqycdglrGalvvy 113 p++sf+ +d G++ H h+ g G +vv 486762|Pucst1_GeneCatalog_proteins_20130920.aa.fasta|AA1 483 PSASFVVVRLNADIPGAWIMHCHIGWHIAGGYAGVVVVQ 521 5666666555678889999******99999999999985 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (553 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 80.51 // Query: 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 [L=380] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.8e-38 120.4 0.0 2.9e-38 120.4 0.0 1.0 1 AA1.hmm 8.5e-35 108.4 0.0 1.1e-34 108.0 0.0 1.1 1 AA1_3.hmm 3.2e-34 106.5 0.0 4e-34 106.2 0.0 1.1 1 AA1_2.hmm 1.6e-31 97.6 0.0 2.2e-31 97.1 0.0 1.2 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 120.4 0.0 2.9e-38 2.9e-38 100 280 .. 2 210 .. 1 340 [. 0.75 Alignments for each domain: == domain 1 score: 120.4 bits; conditional E-value: 2.9e-38 AA1.hmm 100 adGlrGaliirdpks..kekydvddeelvillsdwyhktaeell......ken.at 146 adG+ G++ii++p++ k+++d+d +++v++l+dwyh+t+++++ ++ t 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 2 ADGINGPMIIHSPRDplKRSVDFD-HDVVLMLTDWYHNTSSDIVhellseAGHiGT 56 79*********9966444499998.788****************999854222566 PP AA1.hmm 147 gaepapdsllinGkgrlync.....s......sklevlkvepgktyrlrlinaaln 191 a+p ++s+linG g+ nc s s+ +++v++g++ r+rlin +++ 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 57 PAAPGANSALINGVGEW-NCslattSqqckqvSSPPEFTVTAGQRIRFRLINSGVH 111 677779*********97.5645544145545655569******************* PP AA1.hmm 192 aeltfsidnHkltvieaDgvyvk.pyevdslqiapGqrydvllkanqsa..gnywi 244 a++++s+d+H l++ eaD +++ p + ++ ++ Gqry+v++++++++ +++ + 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 112 AMFFYSVDEHMLNITEADSTPIYgPSDFRHIWLHNGQRYSVIVQTKKEDagRSFHM 167 *********************9659*******************88888767**** PP AA1.hmm 245 raslds...a....afdnttalailrYkgassas.nvsfvepst 280 ra++ds a + + ta +ilr ++++++ ++s + p+t 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 168 RATMDSdcwAwipnD-IQDTAFGILRVVNEDTKPeKISKARPKT 210 **9999666255534.5788899999966444433344444443 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 108.0 0.0 1.1e-34 1.1e-34 122 300 .. 2 200 .. 1 213 [. 0.85 Alignments for each domain: == domain 1 score: 108.0 bits; conditional E-value: 1.1e-34 AA1_3.hmm 122 adGvlGplvinGP.....asanydvdlgpllltdwshesafelveeae......as 166 adG+ Gp++i+ P s ++d+d+ +l+ltdw+h++ +++v+e + 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 2 ADGINGPMIIHSPrdplkRSVDFDHDV-VLMLTDWYHNTSSDIVHELLseaghiGT 56 79**********955554467888885.7899**********99998866665445 PP AA1_3.hmm 167 ggppvadniLingknkvkkskk......eeegeysevklekgkkyrlrlintsvds 216 ++p a++ Ling +++++s + ++ ++ e+++++g++ r+rlin++v++ 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 57 PAAPGANSALINGVGEWNCSLAttsqqcKQVSSPPEFTVTAGQRIRFRLINSGVHA 112 556899*************988777666566666779******************* PP AA1_3.hmm 217 tfkfsidgHkltviaaDfvpie.pyttdslligigqRydviveanqe..eenywlr 269 +f +s+d+H l++ +aD pi p + +++++ gqRy viv++++e +++ +r 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 113 MFFYSVDEHMLNITEADSTPIYgPSDFRHIWLHNGQRYSVIVQTKKEdaGRSFHMR 168 *********************759999******************998899***** PP AA1_3.hmm 270 aelaeaCskl..naeekeikailrYeeassaep 300 a+++++C ++ n+ ++++ +ilr ++++ +p 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 169 ATMDSDCWAWipNDIQDTAFGILRVVNEDT-KP 200 *******99855677888899999888777.34 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 106.2 0.0 4e-34 4e-34 93 267 .. 2 202 .. 1 248 [. 0.89 Alignments for each domain: == domain 1 score: 106.2 bits; conditional E-value: 4e-34 AA1_2.hmm 93 eDGlrgpliiedkeepy....eydeeltltlsdwYheeskelvkeflskynptg.. 142 DG+ gp+ii+ +++p ++d++++l+l+dwYh++s+++v+e+ls++ g 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 2 ADGINGPMIIHSPRDPLkrsvDFDHDVVLMLTDWYHNTSSDIVHELLSEAGHIGtp 57 6***********998877778****************************7765511 PP AA1_2.hmm 143 aepipdsllv..................netenatlevepgktYllriinvgafas 180 a p +s+l+ + ++ +++v++g++ ++r+in g+ a+ 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 58 AAPGANSALIngvgewncslattsqqckQVSSPPEFTVTAGQRIRFRLINSGVHAM 113 6677789999**************99988888999********************* PP AA1_2.hmm 181 qylvledhemtivevDGvdve.psevdslyiavaQRysvLvkaknd.tsknyalva 234 ++ ++++h ++i e+D++ + ps ++ + +QRysv+v++k++ + +++++ a 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 114 FFYSVDEHMLNITEADSTPIYgPSDFRHIWLHNGQRYSVIVQTKKEdAGRSFHMRA 169 ******************9853889******************997366******* PP AA1_2.hmm 235 kmdetmldvvpddlqlnvtstlvydksaalaea 267 +md++ + +p+d+q + l+ ++ +++e+ 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 170 TMDSDCWAWIPNDIQDTAFGILRVVNEDTKPEK 202 ***************999988877666665554 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 97.1 0.0 2.2e-31 2.2e-31 103 253 .. 2 175 .. 1 211 [. 0.80 Alignments for each domain: == domain 1 score: 97.1 bits; conditional E-value: 2.2e-31 AA1_1.hmm 103 cdglrGalvvydpedplkslydvddestvitladwyhtaakell............ 146 dg+ G+++++ p+dplk+ d+d++ v++l+dwyh++++++ 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 2 ADGINGPMIIHSPRDPLKRSVDFDHD-VVLMLTDWYHNTSSDIVhellseaghigt 56 69*********************986.799***********999999999999877 PP AA1_1.hmm 147 klvavadstlinGlgrya...ggpeaelav......vnvekgkrYrfrlvsiscdp 193 +++ a+s+linG+g ++ ++++++ +v++g+r rfrl++ ++ 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 57 PAAPGANSALINGVGEWNcslATTSQQCKQvssppeFTVTAGQRIRFRLINSGVHA 112 77799***********9944423333333311122268****************** PP AA1_1.hmm 194 nftfsidghnltvieadgvnt.kpltvdsiqifagqrysvvleanqevd..nYwir 246 f +s+d+h l++ ead++ + p + +i + gqrysv++++++e + + +r 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 113 MFFYSVDEHMLNITEADSTPIyGPSDFRHIWLHNGQRYSVIVQTKKEDAgrSFHMR 168 *******************86369*******************9886532389999 PP AA1_1.hmm 247 anpnlgk 253 a++++ 149|Pucgr2_GeneCatalog_proteins_20150718.aa.fasta|AA1 169 ATMDSDC 175 9998776 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (380 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 130.56 // [ok]