# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA1/fasta_for_each_cluster/cluster_126.txt # target HMM database: merged_hmms/AA1.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA1/AA1_cluster_126.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 [L=583] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.4e-101 326.1 0.0 1e-100 325.8 0.0 1.0 1 AA1.hmm 2.4e-56 179.1 0.0 3.4e-56 178.6 0.0 1.2 1 AA1_1.hmm 7e-55 174.4 0.0 1.2e-54 173.6 0.0 1.3 1 AA1_3.hmm 1.5e-51 163.4 0.0 3e-51 162.4 0.0 1.5 1 AA1_2.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 325.8 0.0 1e-100 1e-100 7 357 .. 77 562 .. 66 563 .. 0.87 Alignments for each domain: == domain 1 score: 325.8 bits; conditional E-value: 1e-100 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgt 56 +e++ il+NgqfPgP i++neg+ +++t +N l +++++iH+hGl q+gt 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 77 FEKPTILINGQFPGPEIRINEGEILQITYRNFLYTDSLSIHLHGLDQHGT 126 68999****************************99*************** PP AA1.hmm 57 nwaDGvagvtqcpiapgksftYeftvte.qaGtywyHsHvslqyadGlrG 105 +++DGv v+q pi pg+sft + +++ aGt++yH+H++l ad G 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 127 PFYDGVGRVSQDPILPGNSFTIKTKTSVgDAGTFMYHAHTGLLIAD---G 173 *************************9999*****************...* PP AA1.hmm 106 aliird..pkske..kydvddeelvillsdwyhktaeell....kenatg 147 +lii++ p+ske kyd +e ++ll+dw+h+ta+e + ++++ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 174 PLIIDGtgPRSKEslKYD---DERTVLLQDWWHSTAQEETigllSSKT-- 218 *****5569999955555...677************998855543333.. PP AA1.hmm 148 aepa.....pdsllinGkgrlync......s......sklevlkvepgkt 180 + ++sll+nG+gr++nc + ++++v+ v++gkt 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 219 ---FrwigdAQSLLVNGQGRFANCtptsatNatalynTDYAVIPVDAGKT 265 ...2345569**************77766515566668999********* PP AA1.hmm 181 yrlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqryd 230 yrlr+i+a++ l+f + nH+lt ie+Dg+yv p+ v++l++apG r++ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 266 YRLRVIGATTLGYLSFVLPNHTLTLIEVDGTYVAPTVVSHLEVAPGMRFS 315 ************************************************** PP AA1.hmm 231 vllkanqsagnywira.sldsaafdnttalailrYkgassas........ 271 vl+k++q++g+yw+ a + +a +++l+ilrY+ga + + 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 316 VLVKTDQPVGDYWMTAsVRWRA-SGPSNGLSILRYSGAATPAtvpapapa 364 ****************555544.4889********997654478899999 PP AA1.hmm 272 .................................................. 271 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 365 tlvrgppealewgqnltahptlrkrvmprgpanltlvlearqlrtadgfl 414 9999999999**************************************** PP AA1.hmm 272 .....nvsfvep.stsllea.ysgv.....detka.klkln......... 299 nvs+++p ++slle+ ys++ et+ +l+ n 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 415 rwamnNVSYALPrDVSLLESaYSKTlaalpRETAViTLPSNgvvdvivqn 464 ************99999999777666777633333644444566666778 PP AA1.hmm 300 ..........hp..lhghdfvvv........nfd......aedeak...r 320 hp lhgh+f+ + + e + r 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 465 lagpsgvceiHPwhLHGHSFWDLgggpgyydA-NstsatlPE---NpvyR 510 8899999999*************999985530.233444444...1556* PP AA1.hmm 321 dtvavp...............kggwvvirfvadnpgvwllhchieaHlsm 355 d+vav ++gw irfvadnpgvw++hchi +H+ m 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 511 DVVAVYpyggayfqtalaaaaPCGWKRIRFVADNPGVWPFHCHIPSHMVM 560 ***6666*************9***************************** PP AA1.hmm 356 Gl 357 G+ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 561 GM 562 *9 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 178.6 0.0 3.4e-56 3.4e-56 3 273 .. 74 354 .. 72 368 .. 0.91 Alignments for each domain: == domain 1 score: 178.6 bits; conditional E-value: 3.4e-56 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwh 52 pD f++ ++l+ng+fpgp i ++g+ ++i+ n L + s sih h 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 74 PDCFEKPTILINGQFPGPEIRINEGEILQITYRNFLYTD----SLSIHLH 119 9*********************************99765....679**** PP AA1_1.hmm 53 glfqkgtnwadgpafvtqCPiapgnsflydfkv.pdqaGtfwYHshlstq 101 gl q+gt + dg+ v+q Pi pgnsf+ + k+ + aGtf YH+h 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 120 GLDQHGTPFYDGVGRVSQDPILPGNSFTIKTKTsVGDAGTFMYHAHTGLL 169 *****************************9998689************** PP AA1_1.hmm 102 ycdglrGalvvydpedplkslydvddestvitladwyhtaakell..... 146 d G+l++ k+ dde tv+ l dw+h++a+e + 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 170 IAD---GPLIIDGTGPRSKESLKYDDERTVL-LQDWWHSTAQEETiglls 215 999...6***9777777889999******96.9*********99889999 PP AA1_1.hmm 147 ....klvavadstlinGlgryagg...........peaelavvnvekgkr 181 + + a+s l+nG+gr+a+ ++++av+ v +gk 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 216 sktfRWIGDAQSLLVNGQGRFANCtptsatnatalYNTDYAVIPVDAGKT 265 88766778899**********9755666666666667899********** PP AA1_1.hmm 182 Yrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqifagqrys 231 Yr+r++ ++ f + +h+lt+ie+dg+ + p+ v+++++ g r+s 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 266 YRLRVIGATTLGYLSFVLPNHTLTLIEVDGTYVAPTVVSHLEVAPGMRFS 315 ************************************************** PP AA1_1.hmm 232 vvleanqevdnYwiranpnlgkntgfegginsailrykgape 273 v+++++q+v++Yw+ a+ ++ +g ++g+ +ilry+ga++ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 316 VLVKTDQPVGDYWMTASVRWRA-SGPSNGL--SILRYSGAAT 354 *******************999.7777776..7******975 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 173.6 0.0 1.2e-54 1.2e-54 7 301 .. 54 356 .. 48 366 .. 0.88 Alignments for each domain: == domain 1 score: 173.6 bits; conditional E-value: 1.2e-54 AA1_3.hmm 7 vpktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlev 56 +t+v+r ++l+ te+ + pD +ek+++l+ngq+Pgp i+ + G+ l++ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 54 DRRTSVVRVFELNFTEVYAGPDCFEKPTILINGQFPGPEIRINEGEILQI 103 56799********************************************* PP AA1_3.hmm 57 tvknnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat 106 t +n l ++ siH HG+ q+ t +DGv v+q pi pg+sft + +++ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 104 TYRNFLYTDSLSIHLHGLDQHGTPFYDGVGRVSQDPILPGNSFTIKTKTS 153 ********************************************987754 PP AA1_3.hmm 107 ..qyGtswYHsHyslQyadGvlGplvinG..P...asanydvdlgplllt 149 Gt +YH+H l adG pl+i+G P +s +yd +++ll+ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 154 vgDAGTFMYHAHTGLLIADG---PLIIDGtgPrskESLKYDD-ERTVLLQ 199 2289**************96...9999863365445678985.5899*** PP AA1_3.hmm 150 dwshesafelveeae...asggppvadniLingknkvkkskk........ 188 dw h++a+e + + + a++ L+ng++++++ + 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 200 DWWHSTAQEETIGLLsskTFRWIGDAQSLLVNGQGRFANCTPtsatnata 249 *******99887766332444556789*********99876678888776 PP AA1_3.hmm 189 eeegeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie 238 ++ y+ + +++gk+yrlr+i +++ +++f + +H+lt+i+ D + 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 250 LYNTDYAVIPVDAGKTYRLRVIGATTLGYLSFVLPNHTLTLIEVDGTYVA 299 557888899***************************************** PP AA1_3.hmm 239 pyttdslligigqRydviveanqeeenywlraelaeaCsklnaeekeika 288 p +++l ++ g R+ v+v+++q +++yw+ a+++ + s ++ + 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 300 PTVVSHLEVAPGMRFSVLVKTDQPVGDYWMTASVRWRASG----PSNGLS 345 *********************************9887666....78999* PP AA1_3.hmm 289 ilrYeeassaept 301 ilrY++a + p+ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 346 ILRYSGAAT--PA 356 ****99987..33 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 162.4 0.0 3e-51 3e-51 1 330 [. 78 433 .. 78 439 .. 0.84 Alignments for each domain: == domain 1 score: 162.4 bits; conditional E-value: 3e-51 AA1_2.hmm 1 errvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtn 50 e+++i +Ngq+P pei++n+g+ ++++ N l + + s+H HGl q+gt 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 78 EKPTILINGQFPGPEIRINEGEILQITYRNFLYTDSLSIHLHGLDQHGTP 127 5889********************************************** PP AA1_2.hmm 51 amDGasmvtqCpippgetltYeftvee.qvGtYWyHsHskgqYeDGlrgp 99 +DG+ v+q pi pg+++t +++++ ++Gt+ yH+H++ DG p 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 128 FYDGVGRVSQDPILPGNSFTIKTKTSVgDAGTFMYHAHTGLLIADG---P 174 ********************999875459****************8...9 PP AA1_2.hmm 100 liied....keepyeydeeltltlsdwYheeskelvkeflskynptgaep 145 lii+ ++e +yd+e t+ l dw+h++ +e + +ls + + 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 175 LIIDGtgprSKESLKYDDERTVLLQDWWHSTAQEETIGLLSSKTFRWIG- 223 ***97443344777*******************9999998875554333. PP AA1_2.hmm 146 ipdsllv....................netenatlevepgktYllriinv 175 +sllv +t+ a ++v++gktY+lr+i 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 224 DAQSLLVngqgrfanctptsatnatalYNTDYAVIPVDAGKTYRLRVIGA 273 34666668999999999999999999989999****************** PP AA1_2.hmm 176 gafasqylvledhemtivevDGvdvepsevdslyiavaQRysvLvkaknd 225 +++ +vl +h++t++evDG++v p+ v++l++a + R+svLvk+ + 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 274 TTLGYLSFVLPNHTLTLIEVDGTYVAPTVVSHLEVAPGMRFSVLVKTD-Q 322 **********************************************95.6 PP AA1_2.hmm 226 tsknyalvakmdetmldvvpddlqlnvtstlvydksaalaeastv..... 270 + +y+++a++ + + l++ s ++ + ++++t+ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 323 PVGDYWMTASVRWRA-SGPSNGLSILRYSGAATPATVPAPAPATLvrgpp 371 778999999997765.3344566666666666666666666665557777 PP AA1_2.hmm 271 delealdDfkleplekeelleepdkeie..ldvemdnlkdgvnyaffNni 318 ++le ++++ +p+ +++++++ +++ l+ + + dg + ++Nn+ 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 372 EALEWGQNLTAHPTLRKRVMPRGPANLTlvLEARQLRTADGFLRWAMNNV 421 8889999999999999999987655555005555667789********** PP AA1_2.hmm 319 tYvapkvptllt 330 +Y p+ +ll 657956|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 422 SYALPRDVSLLE 433 ***998777764 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (583 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.01 # Mc/sec: 75.17 // Query: 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 [L=518] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.5e-98 318.0 0.2 3.4e-98 317.5 0.2 1.1 1 AA1.hmm 9.7e-61 193.6 0.1 5.9e-58 184.5 0.0 3.0 2 AA1_2.hmm 4.4e-59 188.2 0.8 1.6e-57 183.0 0.3 2.6 2 AA1_3.hmm 3.2e-57 181.9 0.0 1.5e-56 179.7 0.0 1.9 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 317.5 0.2 3.4e-98 3.4e-98 7 358 .] 47 497 .. 36 497 .. 0.87 Alignments for each domain: == domain 1 score: 317.5 bits; conditional E-value: 3.4e-98 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnw 58 + +++ +Ng++P P i++++gD+++vtV+N lese ++iH+hG+rqlgt+w 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 47 YAKTIRYINGHYPAPAIHVDQGDRLRVTVRNGLESEAISIHFHGIRQLGTPW 98 5678999********************************************* PP AA1.hmm 59 aDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliir 110 +DG++ v+q i++gk++t ef+v++q+Gt+ yH+H ++q+ + ++Ga+ii+ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 99 YDGTSHVSQNAIPAGKEMTLEFSVKGQSGTFLYHAHNAMQELS-MFGAVIIN 149 *******************************************.******** PP AA1.hmm 111 dpkske....kydvddeelvillsdwyhktaeellkenatgaepapdsllin 158 ++++ +yd +e +i+lsd +h+++ +++ + + ++p+ ++ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 150 ESSE-VrrtlHYD---DERTIILSDSWHNSSLAQE--TGLLGAPFRWGATTG 195 6544.24656677...678************9988..456777776666665 PP AA1.hmm 159 GkgrlyncssklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDg 210 G ++++v+p ktyr+r+inaa+ + l+f i +H++ vieaDg 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 196 GY----------AITTVDPHKTYRFRIINAATLNFLRFDIPGHTMRVIEADG 237 55..........5789************************************ PP AA1.hmm 211 vyvkpyevdslqiapGqrydvllkanqsagnywira.sldsaafdnttalai 261 + +p+++d+l++ +Gqry+vl++++q+a++yw+ ++ ++ +++++ +i 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 238 TLLRPTKIDHLELNAGQRYSVLITTDQEAKDYWMSSqAMWRK-ASAQNGWSI 288 ************************************777765.47899**** PP AA1.hmm 262 lrYkgassas.......................................... 271 lrY++a+++ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 289 LRYSNAKTHVstppatlpargpeipswmedhlkplypprvpqqdgdtlfynf 340 ***99766558999999*********************************** PP AA1.hmm 272 ...............nvsfvepstsllea.ysgv....detka........k 295 n +++p+++ll + y+++ a + 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 341 sqvaladgmvrwkvaNRVYQLPEQALLLQhYNNTiqnlP---AaskpvsieR 389 **************9999999988888776766644441...1333343330 PP AA1.hmm 296 lkln....................hp..lhghdfvvv....nfd.....aed 316 + hp lhgh+f+ + + + d 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 390 ---GrvvdivlqssvgnlngvceeHPfhLHGHSFWDLgggnG-TwhsgiKAD 437 ...144455566667788888999*************98850.344667566 PP AA1.hmm 317 eak...rdtvavp...............kggwvvirfvadnpgvwllhchie 350 +++ rdtv+v ++gw irfvadnpg wllhchi 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 438 VKNsilRDTVTVYpyrsayfqtplpagtSCGWRRIRFVADNPGAWLLHCHIV 489 666788****6655************************************** PP AA1.hmm 351 aHlsmGla 358 aHl mG+a 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 490 AHLVMGMA 497 *******6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 184.5 0.0 5.9e-58 5.9e-58 7 329 .. 54 368 .. 48 374 .. 0.82 2 ! 4.0 0.0 0.0046 0.0046 75 106 .. 475 506 .. 454 510 .. 0.79 Alignments for each domain: == domain 1 score: 184.5 bits; conditional E-value: 5.9e-58 AA1_2.hmm 7 vNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmv 58 +Ng++P p+i+v++gdr++v++ Ngle e+ s+HfHG+ q gt ++DG+s+v 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 54 INGHYPAPAIHVDQGDRLRVTVRNGLESEAISIHFHGIRQLGTPWYDGTSHV 105 9*************************************************** PP AA1_2.hmm 59 tqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeepy. 109 +q ip g+++t ef+v+ q+Gt+ yH+H+ q + g++ii++++e+ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 106 SQNAIPAGKEMTLEFSVKGQSGTFLYHAHNAMQEL-SMFGAVIINESSEVRr 156 *******************************9966.6889999999885544 PP AA1_2.hmm 110 ..eydeeltltlsdwYheeskelvkeflskynptgaepipdsllvnetenat 159 +yd+e t++lsd +h++s ++tg p + a 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 157 tlHYDDERTIILSDSWHNSSLA---------QETGLLGAPFRWGATTGGYAI 199 55***************98654.........445555556666666677778 PP AA1_2.hmm 160 levepgktYllriinvgafasqylvledhemtivevDGvdvepsevdslyia 211 +v+p ktY++riin +++ + + +h+m+++e+DG+ ++p+++d+l+++ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 200 TTVDPHKTYRFRIINAATLNFLRFDIPGHTMRVIEADGTLLRPTKIDHLELN 251 89************************************************** PP AA1_2.hmm 212 vaQRysvLvkakndtsknyalvakmdetmldvvpddlqlnvtstlvydksaa 263 ++QRysvL+++ +++++ ++ ++m ++ + n s l+y+++++ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 252 AGQRYSVLITTDQEAKDYWMSSQAMWRK-------ASAQNGWSILRYSNAKT 296 *********9987766555444444443.......34445555555555544 PP AA1_2.hmm 264 laeas..tv....delealdDfkleplekeelleepdkeieldvemdnlkdg 309 + ++ t+ e+ + + +l+pl ++ ++ ++ +++ l dg 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 297 HVSTPpaTLpargPEIPSWMEDHLKPLYPPRVPQQDGDTLFYNFSQVALADG 348 4433322222233667666666899999977777777888889999999999 PP AA1_2.hmm 310 vnyaffNnitYvapkvptll 329 + + + n Y+ p+ + ll 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 349 MVRWKVANRVYQLPEQALLL 368 99999999999999988776 PP == domain 2 score: 4.0 bits; conditional E-value: 0.0046 AA1_2.hmm 75 veeqvGtYWyHsHskgqYeDGlrgpliiedke 106 v ++ G++ +H+H ++ + G+ ++i+ +++ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 475 VADNPGAWLLHCHIVAHLVMGMAESFIVGETQ 506 5699***********************98765 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.0 0.3 1.6e-57 1.6e-57 11 301 .. 28 300 .. 20 308 .. 0.88 2 ? -1.9 0.0 0.33 0.33 101 130 .. 472 501 .. 455 505 .. 0.77 Alignments for each domain: == domain 1 score: 183.0 bits; conditional E-value: 1.6e-57 AA1_3.hmm 11 gvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnl 62 +++++l++tes apD ++k++ ++ng+yP+p+i+ d GD+l+vtv+n l 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 28 VAVKSFDLNITESVGAPDCYAKTIRYINGHYPAPAIHVDQGDRLRVTVRNGL 79 56899*********************************************** PP AA1_3.hmm 63 kknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefrat.qyGtswY 113 ++++ siH+HGirql t ++DG + v+q +i+ g+++t ef+++ q Gt Y 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 80 ESEAISIHFHGIRQLGTPWYDGTSHVSQNAIPAGKEMTLEFSVKgQSGTFLY 131 ******************************************97699***** PP AA1_3.hmm 114 HsHyslQyadGvlGplvinGP....asanydvdlgpllltdwshesafelve 161 H+H ++Q ++G+++in + +yd + ++++l+d h+s 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 132 HAHNAMQELS-MFGAVIINESsevrRTLHYDDE-RTIILSDSWHNS------ 175 *******875.9******987222234567654.566666666655...... PP AA1_3.hmm 162 eaeasggppvadniLingknkvkkskkeeegeysevklekgkkyrlrlints 213 +++++L+ ++ ++g y+ +++++ k+yr+r+in++ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 176 -------SLAQETGLLGAPFRWGA----TTGGYAITTVDPHKTYRFRIINAA 216 .......23457899999999998....7899******************** PP AA1_3.hmm 214 vdstfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqeeen 265 + ++++f i gH+++vi+aD ++p + d+l ++ gqRy v+++++qe+++ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 217 TLNFLRFDIPGHTMRVIEADGTLLRPTKIDHLELNAGQRYSVLITTDQEAKD 268 **************************************************** PP AA1_3.hmm 266 ywlraelaeaCsklnaeekeikailrYeeassaept 301 yw+ ++ + +a++++ +ilrY++a+++ t 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 269 YWMSSQAMW--R--KASAQNGWSILRYSNAKTHVST 300 ***999654..3..36789999*******9995443 PP == domain 2 score: -1.9 bits; conditional E-value: 0.33 AA1_3.hmm 101 YefratqyGtswYHsHyslQyadGvlGplv 130 +f a++ G H H+ + G++ + + 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 472 IRFVADNPGAWLLHCHIVAHLVMGMAESFI 501 479999************999999987765 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 179.7 0.0 1.5e-56 1.5e-56 2 302 .. 43 330 .. 42 331 .. 0.88 2 ? -0.5 0.0 0.11 0.11 85 116 .. 475 506 .. 455 510 .. 0.82 Alignments for each domain: == domain 1 score: 179.7 bits; conditional E-value: 1.5e-56 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 +pD ++++ +ng++p+p i+ +gd+++++v n L+ e + sih+hg 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 43 APDCYAKTIRYINGHYPAPAIHVDQGDRLRVTVRNGLESE----AISIHFHG 90 69***********************************986....569***** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdg 105 + q gt w dg++ v+q i +g+ + +f+v++q+Gtf YH+h ++q + 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 91 IRQLGTPWYDGTSHVSQNAIPAGKEMTLEFSVKGQSGTFLYHAHNAMQEL-S 141 ************************************************96.6 PP AA1_1.hmm 106 lrGalvvydpedplkslydvddestvitladwyhtaakellklvavadstli 157 + Ga+++ + ++ ++l dde t+i l+d +h+++ + +++l 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 142 MFGAVIINESSEVRRTL-HYDDERTII-LSDSWHNSSLAQ-------ETGL- 183 789*9998887766655.689****97.89999*988766.......4455. PP AA1_1.hmm 158 nGlgryaggpeaelavvnvekgkrYrfrlvsiscdpnftfsidghnltviea 209 G g ++ +a+ +v +k Yrfr+++ ++ + +f i gh++ viea 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 184 LGAPFRWGATTGGYAITTVDPHKTYRFRIINAATLNFLRFDIPGHTMRVIEA 235 5666666788999*************************************** PP AA1_1.hmm 210 dgvntkpltvdsiqifagqrysvvleanqevdnYwiranpnlgkntgfeggi 261 dg+ +p+++d++++ agqrysv+++++qe ++Yw+ ++ +k ++ + 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 236 DGTLLRPTKIDHLELNAGQRYSVLITTDQEAKDYWMSSQAMWRK-ASAQ--N 284 *************************************9999988.4444..4 PP AA1_1.hmm 262 nsailrykgapea..ePttkq...kastnpLkeanlhplvaeaaPg 302 +ilry++a+++ P ++ + e +l+pl +++P+ 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 285 GWSILRYSNAKTHvsTPPATLparGPEIPSWMEDHLKPLYPPRVPQ 330 568*******876334433333445566778999999999999997 PP == domain 2 score: -0.5 bits; conditional E-value: 0.11 AA1_1.hmm 85 vpdqaGtfwYHshlstqycdglrGalvvydpe 116 v+d+ G++ H h+ + + g+ +++v + + 447991|Gervar1_GeneCatalog_proteins_20181203.aa.fasta|AA1 475 VADNPGAWLLHCHIVAHLVMGMAESFIVGETQ 506 57899**********************98876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (518 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01 # Mc/sec: 56.21 // Query: 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 [L=549] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.3e-113 366.5 0.5 5.1e-113 366.3 0.5 1.0 1 AA1.hmm 5.1e-70 224.2 2.1 1e-67 216.6 0.2 2.1 2 AA1_2.hmm 1.2e-69 222.9 4.2 5.7e-69 220.7 0.5 2.1 2 AA1_3.hmm 4.1e-65 207.9 0.5 2.5e-63 202.0 0.1 2.1 2 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 366.3 0.5 5.1e-113 5.1e-113 7 358 .] 48 520 .. 37 520 .. 0.88 Alignments for each domain: == domain 1 score: 366.3 bits; conditional E-value: 5.1e-113 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnw 58 +++++ +Ngq+PgPtie+n+gD+v+vt++Nkl +e++tiH+hG++q+gt++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 48 FNKTIRYINGQYPGPTIELNKGDNVQVTIRNKLAAESLTIHFHGISQRGTPF 99 789999***************************99***************** PP AA1.hmm 59 aDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliir 110 +DG++ +tq pi+pg+++t +f+v++ +Gty+yH+H +l ++ ++G+l+i+ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 100 YDGASHITQTPIPPGEQMTTTFSVDGHVGTYFYHAHQDLLDTT-IFGPLVIH 150 *******************************************.******** PP AA1.hmm 111 dpkskekydvddeelvillsdwyhktaeellkenatgaepa....pdsllin 158 dp +ke++ +d ee +++lsd++h+t+e++ ++ +++ pds+l n 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 151 DPIDKEQFHYD-EERTLMLSDFWHETSERQQAGFRNN---IwlgdPDSILTN 198 *9998866665.888*************988333222...23457******* PP AA1.hmm 159 Gkgrlyncs......sklevlkvepgktyrlrlinaalnaeltfsidnHklt 204 G +++ nc+ +++e+++v+p ktyr+r+inaa+ + ++f+i +H++t 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 199 GITTHENCTdpssnrQRYEIITVDPRKTYRFRIINAATLSFFRFEISGHNMT 250 **99999944555667899********************************* PP AA1.hmm 205 vieaDgvyvkpyevdslqiapGqrydvllkanqsagnywira.slds.aafd 254 vieaDg+ +kp++vd+l+i +Gqry+vl++ nq++++yw+ + + + + 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 251 VIEADGTLIKPVNVDHLEINAGQRYSVLITMNQEPKDYWFLTrVMWRpN--G 300 ******************************************7777754..6 PP AA1.hmm 255 nttalailrYkgassas................................... 271 ++ ++lrY+++ s++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 301 PANGHGVLRYSTSGSTEmgvpppvvnatvigapswmedvlvplaaktpipea 352 78999*****887766689999999999999********************* PP AA1.hmm 272 ..........................nvsfvepstsllea.ysgv....det 292 n+s+++p+ +ll++ y+g+ d++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 353 tttltytiaqkymptprgtfllwtmgNISYALPHKPLLTShYDGTlpwiDQQ 404 ****************************************888888888333 PP AA1.hmm 293 ka...........klkln.............hp..lhghdfvvv.....nfd 313 + hp lhg++f+ + +d 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 405 SRpqtirgqevvdV---VlqlvagpagiceeHPfhLHGYQFWDLgggpgAYD 453 33455555554440...25566889999999*************88777555 PP AA1.hmm 314 .aedeak..........rdtvavp...............kggwvvirfvadn 339 + + rdt +v ++gw irf+adn 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 454 pK----SspepsphailRDTATVYpytgahhqtpipqgeVCGWRRIRFIADN 501 42....222246788999999555599999999999999************* PP AA1.hmm 340 pgvwllhchieaHlsmGla 358 pg+w++hchi++H+ G+a 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 502 PGIWIFHCHITFHMMEGMA 520 ******************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 216.6 0.2 1e-67 1e-67 7 330 .. 55 392 .. 49 396 .. 0.87 2 ! 7.3 0.1 0.00047 0.00047 60 106 .. 481 529 .. 471 537 .. 0.81 Alignments for each domain: == domain 1 score: 216.6 bits; conditional E-value: 1e-67 AA1_2.hmm 7 vNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmv 58 +Ngq+P p+ie nkgd+v+v++ N+l e+ ++HfHG+ q+gt +DGas++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 55 INGQYPGPTIELNKGDNVQVTIRNKLAAESLTIHFHGISQRGTPFYDGASHI 106 9*************************************************** PP AA1_2.hmm 59 tqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedke..ep 108 tq pippge++t +f+v+ vGtY yH+H++ + gpl+i+d+ e+ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 107 TQTPIPPGEQMTTTFSVDGHVGTYFYHAHQDLL-DTTIFGPLVIHDPIdkEQ 157 *****************************9865.45689*******643499 PP AA1_2.hmm 109 yeydeeltltlsdwYheeskelvkeflskynptgaepipdsllv........ 152 ++ydee tl+lsd++he+s++ + f ++ + i + + 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 158 FHYDEERTLMLSDFWHETSERQQAGFRNNIWLGDPDSILTNGITthenctdp 209 9*************************9988887778888888889******* PP AA1_2.hmm 153 ..netenatlevepgktYllriinvgafasqylvledhemtivevDGvdvep 202 n+++ ++v+p ktY++riin ++++ + + + +h+mt++e+DG+ ++p 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 210 ssNRQRYEIITVDPRKTYRFRIINAATLSFFRFEISGHNMTVIEADGTLIKP 261 *99999999******************************************* PP AA1_2.hmm 203 sevdslyiavaQRysvLvkakndtsknyalvakmdetmld.vvpddlqlnvt 253 ++vd+l+i+++QRysvL++ ++++++ + l+ m + l++ ++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 262 VNVDHLEINAGQRYSVLITMNQEPKDYWFLTRVMWRPNGPaNGHGVLRYSTS 313 *******************999999888888888766644144456667777 PP AA1_2.hmm 254 stlvydksaalaeastvdelealdDfkleplekeelleepdkeieldvemdn 305 + +++ + +a+++ + + ++D+ l+pl +++ ++e++++++ +++ + 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 314 GSTEMGVPPPVVNATVIGAPSWMEDV-LVPLAAKTPIPEATTTLTYTIAQKY 364 77888888888888888888999996.8999999999999999888887655 PP AA1_2.hmm 306 lkd..g.vnyaffNnitYvapkvptllt 330 + g ++ ni+Y p++p l++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 365 MPTprGtFLLWTMGNISYALPHKPLLTS 392 5431132566778999999999999987 PP == domain 2 score: 7.3 bits; conditional E-value: 0.00047 AA1_2.hmm 60 qCpippgetltYef..tveeqvGtYWyHsHskgqYeDGlrgpliiedke 106 q pip+ge ++ + ++ G + +H+H + + + G+ +++++++++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 481 QTPIPQGEVCGWRRirFIADNPGIWIFHCHITFHMMEGMATAFVVDPEN 529 667777777665532345699************************9987 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 220.7 0.5 5.7e-69 5.7e-69 13 297 .. 31 315 .. 23 328 .. 0.90 2 ! 3.5 0.2 0.0072 0.0072 90 131 .. 481 525 .. 472 530 .. 0.82 Alignments for each domain: == domain 1 score: 220.7 bits; conditional E-value: 5.7e-69 AA1_3.hmm 13 treytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkk 64 +++++l++te + D ++k++ ++ngqyPgptie + GD+++vt++n+l 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 31 VKKFELNITEGIGSQDCFNKTIRYINGQYPGPTIELNKGDNVQVTIRNKLAA 82 789************************************************* PP AA1_3.hmm 65 nGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefratqy.GtswYHs 115 + +iH+HGi q t +DG++ +tq pi+pge++t +f+++ + Gt +YH+ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 83 ESLTIHFHGISQRGTPFYDGASHITQTPIPPGEQMTTTFSVDGHvGTYFYHA 134 *****************************************9766******* PP AA1_3.hmm 116 HyslQyadGvlGplvinGP.asanydvdl.gpllltdwshesafelveeaea 165 H l ++Gplvi+ P ++++ +d ++l+l+d+ he+ ++ ++ ++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 135 HQDLL-DTTIFGPLVIHDPiDKEQFHYDEeRTLMLSDFWHETSERQQAGFRN 185 *9885.667**********64455555543899************9999998 PP AA1_3.hmm 166 sggppvadniLingknkvkkskk..eeegeysevklekgkkyrlrlintsvd 215 + d+iL ng ++++ + +++++y +++++ k+yr+r+in+++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 186 NIWLGDPDSILTNGITTHENCTDpsSNRQRYEIITVDPRKTYRFRIINAATL 237 999999********99988866665667777779****************** PP AA1_3.hmm 216 stfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqeeenyw 267 s+f+f i gH++tvi+aD i+p+++d+l i+ gqRy v+++ nqe ++yw 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 238 SFFRFEISGHNMTVIEADGTLIKPVNVDHLEINAGQRYSVLITMNQEPKDYW 289 **************************************************** PP AA1_3.hmm 268 lraelaeaCsklnaeekeikailrYeeass 297 + +++ + + + +++lrY+++ s 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 290 FLTRVMWRPNG----PANGHGVLRYSTSGS 315 *9998775555....677888888887655 PP == domain 2 score: 3.5 bits; conditional E-value: 0.0072 AA1_3.hmm 90 qCpiapgesftY...efratqyGtswYHsHyslQyadGvlGplvi 131 q pi+ ge + +f a++ G +H H++ +++G++ + v+ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 481 QTPIPQGEVCGWrriRFIADNPGIWIFHCHITFHMMEGMATAFVV 525 66777777654422279**********************999887 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 202.0 0.1 2.5e-63 2.5e-63 3 272 .. 45 314 .. 44 345 .. 0.88 2 ! 4.3 0.0 0.0041 0.0041 85 115 .. 498 528 .. 463 535 .. 0.76 Alignments for each domain: == domain 1 score: 202.0 bits; conditional E-value: 2.5e-63 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhgl 54 D f+++ +ng++pgp i +kgd++++++ n+L e s +ih+hg+ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 45 QDCFNKTIRYINGQYPGPTIELNKGDNVQVTIRNKLAAE----SLTIHFHGI 92 699*********************************876....568****** PP AA1_1.hmm 55 fqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdgl 106 q+gt + dg++ +tq Pi pg++ + +f+v+++ Gt++YH+h + 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 93 SQRGTPFYDGASHITQTPIPPGEQMTTTFSVDGHVGTYFYHAHQDLL-DTTI 143 *******************************************7653.3468 PP AA1_1.hmm 107 rGalvvydpedplkslydvddestvitladwyhtaakell......klvava 152 G+lv++dp d + y d+e t ++l+d++h+++++ + + 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 144 FGPLVIHDPIDKEQFHY--DEERT-LMLSDFWHETSERQQagfrnnIWLGDP 192 9**********888888..56666.68*********9998777753334689 PP AA1_1.hmm 153 dstlinGlgrya..gg...peaelavvnvekgkrYrfrlvsiscdpnftfsi 199 ds l nG+ + ++ +++ + +++v k Yrfr+++ ++ + f+f i 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 193 DSILTNGITTHEncTDpssNRQRYEIITVDPRKTYRFRIINAATLSFFRFEI 244 ********98873323222455689*************************** PP AA1_1.hmm 200 dghnltvieadgvntkpltvdsiqifagqrysvvleanqevdnYwiranpnl 251 ghn+tvieadg+ +kp++vd+++i agqrysv+++ nqe ++Yw + 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 245 SGHNMTVIEADGTLIKPVNVDHLEINAGQRYSVLITMNQEPKDYWFLTRVMW 296 *********************************************9998888 PP AA1_1.hmm 252 gkntgfegginsailrykgap 272 + +g ++g + +lry+++ 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 297 RP-NGPANG--HGVLRYSTSG 314 77.444444..5788887665 PP == domain 2 score: 4.3 bits; conditional E-value: 0.0041 AA1_1.hmm 85 vpdqaGtfwYHshlstqycdglrGalvvydp 115 ++d+ G + +H h++ +++g+ a+vv + 603023|Gaesem1_GeneCatalog_proteins_20161012.aa.fasta|AA1 498 IADNPGIWIFHCHITFHMMEGMATAFVVDPE 528 37899**********************9544 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (549 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.01s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 98.78 // Query: 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 [L=561] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.5e-108 350.8 0.1 3.1e-108 350.6 0.1 1.0 1 AA1.hmm 4.3e-64 204.7 1.7 2.1e-63 202.4 0.9 2.4 2 AA1_2.hmm 2.6e-63 202.0 0.0 4.3e-63 201.2 0.0 1.2 1 AA1_1.hmm 6.6e-61 194.2 0.1 1.8e-60 192.8 0.1 1.6 2 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 350.6 0.1 3.1e-108 3.1e-108 7 358 .] 45 546 .. 34 546 .. 0.86 Alignments for each domain: == domain 1 score: 350.6 bits; conditional E-value: 3.1e-108 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrql 54 +er ++l+Ng+ PgP ++a+ gDt+v++V+N + +e +t+H+hG+ q+ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 45 FERFMVLINGDSPGPALRAHTGDTLVINVYNGMAAEVVTLHFHGILQT 92 7899*****************************99************* PP AA1.hmm 55 gtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadG 102 gt+++DGv+++tq+p+ pg++f++e+++++q+Gt++yH+H+s++ ++ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 93 GTPQSDGVPFITQWPVDPGSTFRQEMHLSNQVGTFYYHAHTSVHGMT- 139 ***********************************************. PP AA1.hmm 103 lrGaliirdpkskekydvddeelvillsdwyhktaeellkenatgaep 150 +Galii+d++++ y +d +e ++llsd+yh+++++++ + ++ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 140 AYGALIIEDKDDRPPYHYD-HERIVLLSDFYHQEDNDIVD--GLLSPS 184 ********88666688888.666****************3..344444 PP AA1.hmm 151 a.....pdsllinGkgrly.nc......s....sklevlkvepgktyr 182 + p s+l nG+++ + nc s ++v++v++g tyr 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 185 FrwigdPHSILTNGNTYDNwNCtqlehsSkapsCGYDVISVKSGLTYR 232 467788*********5322355555544134333477*********** PP AA1.hmm 183 lrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqryd 230 +r+i+a+l++ l+f i +H++tvie+Dg yvkp+ v++l+i +Gqry+ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 233 FRIIGAMLSTYLSFVIPHHTMTVIEVDGFYVKPVRVEHLEINAGQRYS 280 ************************************************ PP AA1.hmm 231 vllkanqsagnywirasldsaafdnttalailrYkgassas....... 271 vl++anq+ +ny ++a+ + + + +++l+il+Y+g+++ + 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 281 VLVEANQPIDNYFMKANAKFRKSTPENGLSILHYEGSPDPNirsppap 328 ****************33333447899*********765557788889 PP AA1.hmm 272 ................................................ 271 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 329 eripavplgtpmwefnrfkmlprdvlpsqlnhpdfpqaydreiqlttg 376 99999999**************************************** PP AA1.hmm 272 ..............nvsfvepstsllea.ysgv..........detka 294 n++f+ep +++l + y+g+ + 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 377 qrkldngairmylnNLTFEEPMSPVLLDlYDGTrsrypdyqkiN---R 421 *********************99999997877767777555441...0 PP AA1.hmm 295 ...........klkln...................hp..lhghdfvvv 310 +kln hp lhgh+f+ v 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 422 tdgydsarrtiPVKLNeviqiviqntatttgrcdqHPfhLHGHSFFDV 469 4456666775533333778888889999999***************** PP AA1.hmm 311 ......nfd....aedeak..........rdtvavp............ 326 + + + rd+v+v 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 470 gggnglY-SpqelS----NqvkaisapllRDVVSVYpetdspdlkyap 512 9876540.244432....12335888999****6555*********** PP AA1.hmm 327 ..kggwvvirfvadnpgvwllhchieaHlsmGla 358 ++gw +irf+adnpgvw++hchi+aH+ G++ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 513 gtPCGWRAIRFIADNPGVWVFHCHITAHMILGMQ 546 *********************************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 202.4 0.9 2.1e-63 2.1e-63 1 329 [. 46 403 .. 46 409 .. 0.83 2 ? -3.3 0.0 0.75 0.75 77 99 .. 526 548 .. 523 551 .. 0.83 Alignments for each domain: == domain 1 score: 202.4 bits; conditional E-value: 2.1e-63 AA1_2.hmm 1 errvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqng 48 er ++ +Ng+ P p++++++gd+++++++Ng+ e ++lHfHG+ q g 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 46 ERFMVLINGDSPGPALRAHTGDTLVINVYNGMAAEVVTLHFHGILQTG 93 58899******************************************* PP AA1_2.hmm 49 tnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGl 96 t + DG++++tq p+ pg+t++ e+++++qvGt++yH+H++ + + 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 94 TPQSDGVPFITQWPVDPGSTFRQEMHLSNQVGTFYYHAHTSVHGMTA- 140 ****************************************9764433. PP AA1_2.hmm 97 rgpliiedke..epyeydeeltltlsdwYheeskelvkeflskynptg 142 g+liiedk+ py+yd+e ++ lsd+Yh+e +++v+ +ls++ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 141 YGALIIEDKDdrPPYHYDHERIVLLSDFYHQEDNDIVDGLLSPSFRWI 188 4899**998866899**************************9877665 PP AA1_2.hmm 143 aepipdsllv...................netenatlevepgktYllr 171 + p+s+l + ++v+ g tY++r 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 189 GD--PHSILTngntydnwnctqlehsskaPSCGYDVISVKSGLTYRFR 234 55..56777788889********98877655556689*********** PP AA1_2.hmm 172 iinvgafasqylvledhemtivevDGvdvepsevdslyiavaQRysvL 219 ii + + +v+ h+mt++evDG +v+p++v++l+i+++QRysvL 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 235 IIGAMLSTYLSFVIPHHTMTVIEVDGFYVKPVRVEHLEINAGQRYSVL 282 ************************************************ PP AA1_2.hmm 220 vkakndtsknyalvakmdetmldvvpddlqlnvtstlvydksaalaea 267 v+a+ ++ +ny + a+ + ++ n s l y+ s + + 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 283 VEAN-QPIDNYFMKANAKFR------KSTPENGLSILHYEGSPDPNIR 323 **96.577899998876543......3444556666666555443322 PP AA1_2.hmm 268 s........tv...delealdDfkleplek.......eelleepdkei 297 s +v + + +++ fk+ p + + +++d+ei 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 324 SppaperipAVplgTPMWEFNRFKMLPRDVlpsqlnhPDFPQAYDREI 371 22333333322455445667777776654422111115677899**** PP AA1_2.hmm 298 eldvemdnlkdgvnyaffNnitYvapkvptll 329 +l++ ++l++g+ + ++Nn+t+ +p p ll 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 372 QLTTGQRKLDNGAIRMYLNNLTFEEPMSPVLL 403 *****************************997 PP == domain 2 score: -3.3 bits; conditional E-value: 0.75 AA1_2.hmm 77 eqvGtYWyHsHskgqYeDGlrgp 99 ++ G + +H+H +++ + G++ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 526 DNPGVWVFHCHITAHMILGMQVL 548 78899999*****9999999866 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 201.2 0.0 4.3e-63 4.3e-63 3 275 .. 42 321 .. 41 336 .. 0.88 Alignments for each domain: == domain 1 score: 201.2 bits; conditional E-value: 4.3e-63 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsih 50 pD f+r +vl+ng pgp + +++gd++ inv n + e ++h 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 42 PDCFERFMVLINGDSPGPALRAHTGDTLVINVYNGMAAE----VVTLH 85 9*********************************99765....679** PP AA1_1.hmm 51 whglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshl 98 +hg++q+gt + dg+ f+tq P+ pg++f ++++++q Gtf+YH+h 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 86 FHGILQTGTPQSDGVPFITQWPVDPGSTFRQEMHLSNQVGTFYYHAHT 133 ************************************************ PP AA1_1.hmm 99 stqycdglrGalvvydpedplkslydvddestvitladwyhtaakell 146 s+ + Gal++ d++d yd + ++ l+d+yh++ +++ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 134 SVHGM-TAYGALIIEDKDDRPPYHYD---HERIVLLSDFYHQEDNDIV 177 99765.457**********8888885...456889**********999 PP AA1_1.hmm 147 ........klvavadstlinGlgryagg..........peaelavvnv 176 + + ++s l nG+ + + p+ + v++v 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 178 dgllspsfRWIGDPHSILTNGNTYDNWNctqlehsskaPSCGYDVISV 225 89998877777889999999987544222344444444777899**** PP AA1_1.hmm 177 ekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsiqi 224 ++g Yrfr++ ++ f i +h++tvie+dg +kp+ v++++i 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 226 KSGLTYRFRIIGAMLSTYLSFVIPHHTMTVIEVDGFYVKPVRVEHLEI 273 ************************************************ PP AA1_1.hmm 225 fagqrysvvleanqevdnYwiranpnlgkntgfegginsailrykgap 272 agqrysv++eanq++dnY+++an +++k ++ e+g+ +il+y+g+p 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 274 NAGQRYSVLVEANQPIDNYFMKANAKFRK-STPENGL--SILHYEGSP 318 ***************************99.6666665..7******98 PP AA1_1.hmm 273 eae 275 + + 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 319 DPN 321 654 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 192.8 0.1 1.8e-60 1.8e-60 13 297 .. 28 319 .. 21 331 .. 0.88 2 ? -2.6 0.0 0.53 0.53 100 124 .. 520 544 .. 512 546 .. 0.80 Alignments for each domain: == domain 1 score: 192.8 bits; conditional E-value: 1.8e-60 AA1_3.hmm 13 treytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvkn 60 ++ey+l+++e +pD +e+ ++l+ng+ Pgp+++a+ GDtl+++v n 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 28 IVEYNLTISEGYRTPDCFERFMVLINGDSPGPALRAHTGDTLVINVYN 75 689********************************************* PP AA1_3.hmm 61 nlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr.atq 107 + + +++H+HGi q+ t ++DGvp +tq p+ pg++f e + +q 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 76 GMAAEVVTLHFHGILQTGTPQSDGVPFITQWPVDPGSTFRQEMHlSNQ 123 ***************************************999872579 PP AA1_3.hmm 108 yGtswYHsHyslQyadGvlGplvinGP.asanydvdl.gpllltdwsh 153 Gt +YH+H s+ + +G+l+i+ + +y +d + +ll+d++h 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 124 VGTFYYHAHTSVH-GMTAYGALIIEDKdDRPPYHYDHeRIVLLSDFYH 170 ***********96.55689*****9983456788887367889***** PP AA1_3.hmm 154 esafelveeae..asggppvadniLingknkvkkskk.......eeeg 192 ++ +++v+ + + ++iL ng+ + + + + 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 171 QEDNDIVDGLLspSFRWIGDPHSILTNGNTYDNWNCTqlehsskAPSC 218 ********999555556677899*****86544333345776555566 PP AA1_3.hmm 193 eysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpiepy 240 y +++++g +yr+r+i + ++++++f i +H++tvi+ D ++p+ 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 219 GYDVISVKSGLTYRFRIIGAMLSTYLSFVIPHHTMTVIEVDGFYVKPV 266 78889******************************************* PP AA1_3.hmm 241 ttdslligigqRydviveanqeeenywlraelaeaCsklnaeekeika 288 ++++l i+ gqRy v+veanq +ny+++a+ + +k ++ ++ + 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 267 RVEHLEINAGQRYSVLVEANQPIDNYFMKANAKF--RK--STPENGLS 310 ******************************9754..33..678999** PP AA1_3.hmm 289 ilrYeeass 297 il+Ye++ + 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 311 ILHYEGSPD 319 *****9876 PP == domain 2 score: -2.6 bits; conditional E-value: 0.53 AA1_3.hmm 100 tYefratqyGtswYHsHyslQyadG 124 +f a++ G +H H+++ + G 306084|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 520 AIRFIADNPGVWVFHCHITAHMILG 544 568999999********99877666 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (561 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 73.85 // Query: 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 [L=560] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.7e-105 341.6 0.1 2e-105 341.3 0.1 1.0 1 AA1.hmm 9.3e-64 203.6 0.0 1.5e-62 199.6 0.0 2.1 2 AA1_2.hmm 1.1e-63 203.3 0.0 3.7e-63 201.6 0.0 1.7 2 AA1_3.hmm 1.6e-60 192.8 0.0 2.8e-60 192.0 0.0 1.3 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 341.3 0.1 2e-105 2e-105 7 358 .] 48 533 .. 37 533 .. 0.86 Alignments for each domain: == domain 1 score: 341.3 bits; conditional E-value: 2e-105 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnw 58 +er + vNg +P P i++n gD+++vt++N+lese ++iH+hG++q+gt+w 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 48 HERVIRYVNGVYPAPAITVNTGDRLRVTIRNRLESEFISIHFHGVKQTGTPW 99 6788999***************************9***************** PP AA1.hmm 59 aDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliir 110 +DG++ ++q i+pgk +t ef+v +qaGt+ yH+H ++q+ + ++Gali++ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 100 SDGTSHISQNAIPPGKDMTLEFHVRDQAGTFLYHAHNAMQELS-IFGALIVQ 150 *******************************************.******** PP AA1.hmm 111 dpkske...kydvddeelvillsdwyhktaeellkenatgaepa.....pds 154 d+k+++ kyd e +++lsd++h+++ +++ + + ++p+ p+s 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 151 DQKEDRkhfKYD---GERTLVLSDYWHNSSIAQE--QGLLGTPFkwigdPQS 197 765544645555...788************9999..4445555559999*** PP AA1.hmm 155 llinGkgrlync....s.......sklevlkvepgktyrlrlinaalnaelt 195 +l nG ++++nc + ++v++ve+gktyr+r+inaa+ ++ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 198 ILTNGITQFANCstsgKlspkapnGGYAVTTVEKGKTYRFRIINAATLGFFR 249 ************6655055555555678************************ PP AA1.hmm 196 fsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsa.gnywira 246 f i +Hk+tvieaDg+ v+p +d+l+i +Gqry+vl++a +++ ++yw+ + 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 250 FDIPGHKMTVIEADGTLVEPRAIDHLEINAGQRYSVLITASNPSdKDYWMST 301 ***************************************9998845****** PP AA1.hmm 247 .slds.aafdnttalailrYkgassas......................... 271 ++ + + ++ ++ +ilrY+++s++s 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 302 qAMWRpK--SAPNGWSILRYSNSSKEStapahgipptslppkgpeisgwmer 351 7777744..68999******8877666899********************** PP AA1.hmm 272 ........................................nvsfvepstsll 283 + s+v+p++++l 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 352 hlvplhkvripaptgptmqlnfsqintgpvgantvrwkigRQSYVLPNQAML 403 ****************************************999***987777 PP AA1.hmm 284 ea.ysgv.......detka..............klkln...........hp. 301 + y+g+ + + + + hp 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 404 LQhYNGTikdmdpaS---KpiyvhknrvvdillQ---ArvgtlngvceqHPf 449 776988766554430...1454443444444443...055588888999*** PP AA1.hmm 302 .lhghdfvvv.....nfd......aedeak....rdtvavp........... 326 lhgh+f+ + + + + k rdt +v 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 450 hLHGHSFWDLgggngTWNptmrpdT----KhaviRDTLTVYpspsayfetpq 497 **********988553336543322....24677***96655********** PP AA1.hmm 327 ....kggwvvirfvadnpgvwllhchieaHlsmGla 358 +gw +rfvadnpg w+lhchi aHl mG+a 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 498 pegtGCGWRRLRFVADNPGAWMLHCHIVAHLVMGMA 533 ***99******************************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 199.6 0.0 1.5e-62 1.5e-62 6 267 .. 54 328 .. 49 408 .. 0.79 2 ? 1.6 0.0 0.026 0.026 75 106 .. 511 542 .. 503 551 .. 0.89 Alignments for each domain: == domain 1 score: 199.6 bits; conditional E-value: 1.5e-62 AA1_2.hmm 6 gvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasm 57 vNg +P p+i+vn+gdr++v++ N+le e s+HfHG+ q gt + DG+s+ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 54 YVNGVYPAPAITVNTGDRLRVTIRNRLESEFISIHFHGVKQTGTPWSDGTSH 105 59************************************************** PP AA1_2.hmm 58 vtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedke... 106 ++q ippg+++t ef+v++q+Gt+ yH+H+ q + g+li++d++ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 106 ISQNAIPPGKDMTLEFHVRDQAGTFLYHAHNAMQEL-SIFGALIVQDQKedr 156 ********************************9976.577999**9987555 PP AA1_2.hmm 107 epyeydeeltltlsdwYheeskelvkeflskynptgaepipdsllv...... 152 ++++yd e tl+lsd++h++s + +l + p p+s+l 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 157 KHFKYDGERTLVLSDYWHNSSIAQEQGLLGT--PFKWIGDPQSILTngitqf 206 677****************999888887654..333444467777777779* PP AA1_2.hmm 153 .............netenatlevepgktYllriinvgafasqylvledhemt 191 + a +ve+gktY++riin +++ + + + +h+mt 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 207 ancstsgklspkaPNGGYAVTTVEKGKTYRFRIINAATLGFFRFDIPGHKMT 258 **********998677778889****************************** PP AA1_2.hmm 192 ivevDGvdvepsevdslyiavaQRysvLvkakndtsknyalvakmdetmldv 243 ++e+DG+ vep +d+l+i+++QRysvL++a n ++k+y++ ++ m+ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 259 VIEADGTLVEPRAIDHLEINAGQRYSVLITASNPSDKDYWMSTQA---MW-- 305 ****************************************98753...33.. PP AA1_2.hmm 244 vpddlqlnvtstlvydksaalaea 267 ++ +n s l+y++s ++ +a 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 306 -RPKSAPNGWSILRYSNSSKESTA 328 .34445555555555555544444 PP == domain 2 score: 1.6 bits; conditional E-value: 0.026 AA1_2.hmm 75 veeqvGtYWyHsHskgqYeDGlrgpliiedke 106 v ++ G++ +H+H ++ + G+ + +++ +++ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 511 VADNPGAWMLHCHIVAHLVMGMATTFLVGPND 542 45899*********************998876 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 201.6 0.0 3.7e-63 3.7e-63 13 299 .. 31 326 .. 24 337 .. 0.89 2 ? -1.3 0.0 0.21 0.21 102 134 .. 509 540 .. 504 544 .. 0.84 Alignments for each domain: == domain 1 score: 201.6 bits; conditional E-value: 3.7e-63 AA1_3.hmm 13 treytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlkk 64 +++++l+vtes apD +e+ + +vng yP+p+i+ + GD+l+vt++n+l++ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 31 VKHFDLNVTESLGAPDCHERVIRYVNGVYPAPAITVNTGDRLRVTIRNRLES 82 689************************************************* PP AA1_3.hmm 65 nGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefra.tqyGtswYHs 115 + siH+HG++q+ t ++DG + ++q +i+pg+ +t ef++ +q Gt YH+ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 83 EFISIHFHGVKQTGTPWSDGTSHISQNAIPPGKDMTLEFHVrDQAGTFLYHA 134 ***************************************984699******* PP AA1_3.hmm 116 HyslQyadGvlGplvinGP..asanydvdl.gpllltdwshesafelveeae 164 H ++Q ++G+l+++ ++++ +d ++l+l+d+ h+s + + 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 135 HNAMQELS-IFGALIVQDQkeDRKHFKYDGeRTLVLSDYWHNSSIAQEQGLL 185 *****875.*******98733344555554378999*****99776666655 PP AA1_3.hmm 165 ..asggppvadniLingknkvkkskk.......eeegeysevklekgkkyrl 207 + ++iL ng ++++ ++ +g y+ +++ekgk+yr+ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 186 gtPFKWIGDPQSILTNGITQFANCSTsgklspkAPNGGYAVTTVEKGKTYRF 237 44445556789*******999887778999998889**************** PP AA1_3.hmm 208 rlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydvivea 259 r+in+++ +f+f i gHk+tvi+aD +ep d+l i+ gqRy v+++a 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 238 RIINAATLGFFRFDIPGHKMTVIEADGTLVEPRAIDHLEINAGQRYSVLITA 289 **************************************************** PP AA1_3.hmm 260 nqe.eenywlraelaeaCsklnaeekeikailrYeeassae 299 ++ +++yw+ ++ + +++++ +ilrY+++s+++ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 290 SNPsDKDYWMSTQAMWRP----KSAPNGWSILRYSNSSKES 326 988799*****9976544....5689999*****9998843 PP == domain 2 score: -1.3 bits; conditional E-value: 0.21 AA1_3.hmm 102 efratqyGtswYHsHyslQyadGvlGplvinGP 134 +f a++ G + H H+ + G++ + ++ GP 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 509 RFVADNPGAWMLHCHIVAHLVMGMATTFLV-GP 540 7999999***************99877654.55 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 192.0 0.0 2.8e-60 2.8e-60 2 274 .. 44 325 .. 44 363 .. 0.88 Alignments for each domain: == domain 1 score: 192.0 bits; conditional E-value: 2.8e-60 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhg 53 +pD +r vng++p+p it ++gd++++++ n+L+ e sih+hg 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 44 APDCHERVIRYVNGVYPAPAITVNTGDRLRVTIRNRLESE----FISIHFHG 91 5999*********************************976....569***** PP AA1_1.hmm 54 lfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdg 105 + q+gt w dg++ ++q i pg+ + +f+v+dqaGtf YH+h ++q + 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 92 VKQTGTPWSDGTSHISQNAIPPGKDMTLEFHVRDQAGTFLYHAHNAMQEL-S 142 ************************************************96.6 PP AA1_1.hmm 106 lrGalvvydpedplkslydvddestvitladwyhtaakell........klv 149 + Gal+v d+++ k + d e t+ l+d++h+++ + + k + 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 143 IFGALIVQDQKEDRK-HFKYDGERTL-VLSDYWHNSSIAQEqgllgtpfKWI 192 88*******988765.4677889886.69******99887778888877777 PP AA1_1.hmm 150 avadstlinGlgryagg..........peaelavvnvekgkrYrfrlvsisc 191 ++s l nG+ ++a+ p+ +av +vekgk Yrfr+++ ++ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 193 GDPQSILTNGITQFANCstsgklspkaPNGGYAVTTVEKGKTYRFRIINAAT 244 899**********9965456677765567779******************** PP AA1_1.hmm 192 dpnftfsidghnltvieadgvntkpltvdsiqifagqrysvvleanqevd.n 242 f+f i gh++tvieadg+ ++p +d+++i agqrysv+++a ++ d + 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 245 LGFFRFDIPGHKMTVIEADGTLVEPRAIDHLEINAGQRYSVLITASNPSDkD 296 ********************************************98887648 PP AA1_1.hmm 243 Ywiranpnlgkntgfegginsailrykgapea 274 Yw+ ++ + ++ +g +ilry++++++ 542252|Powhir1_GeneCatalog_proteins_20180423.aa.fasta|AA1 297 YWMSTQAMWRP-KSAPNG--WSILRYSNSSKE 325 ***99999887.444444..579**9987665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (560 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 103.47 // Query: 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 [L=547] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1e-109 355.4 0.6 1.3e-109 355.1 0.6 1.0 1 AA1.hmm 2.2e-65 208.9 2.2 1.1e-64 206.6 0.4 2.6 2 AA1_2.hmm 1.3e-64 206.3 0.1 2.5e-64 205.3 0.1 1.4 1 AA1_1.hmm 2.9e-63 202.0 2.8 9.3e-63 200.3 1.2 2.0 2 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 355.1 0.6 1.3e-109 1.3e-109 7 358 .] 25 527 .. 14 527 .. 0.85 Alignments for each domain: == domain 1 score: 355.1 bits; conditional E-value: 1.3e-109 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrql 54 +er ++l+N+ PgPti+a+ gDt+v++V+N++ se ++iH+hG+ q+ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 25 YERYMVLINDGSPGPTIRAHTGDTLVINVHNSMASEVVAIHFHGILQT 72 7999*****************************99************* PP AA1.hmm 55 gtnwaDGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadG 102 gt+++DGv++vtq+p+ pgk++++e+++t+q+Gty+yH+H+s++ ++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 73 GTPQSDGVPYVTQWPVDPGKNYRHEIHLTNQVGTYFYHAHTSIHGMS- 119 *******************************************9999. PP AA1.hmm 103 lrGaliirdpkskekydvddeelvillsdwyhktaeellkenatgaep 150 +Gal+i+d+++k y +d ee ++llsd+yh+++++++ + + ++p 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 120 AYGALVIEDKDDKPPYRYD-EERIVLLSDFYHRDDHDIM--SGLLSTP 164 ********88667688887.888****************..4456667 PP AA1.hmm 151 a.....pdsllinGkgrly........ncs....sklevlkvepgkty 181 + p+++l nGk++ + +c+ ++v++v+pg+ty 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 165 FrwigdPQAILTNGKTYENwrcakgdlRCQktasCGYDVINVTPGRTY 212 778899*********54334444444422233333478********** PP AA1.hmm 182 rlrlinaalnaeltfsidnHkltvieaDgvyvkpyevdslqiapGqry 229 r+r+i+a+l++ l+f i +H++tvie+Dg yv+p+++++l+i +Gqry 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 213 RFRIIGAMLSTYLSFVIPHHTMTVIEVDGFYVEPVQINHLEINAGQRY 260 ************************************************ PP AA1.hmm 230 dvllkanqsagnywiraslds..aafdnttalailrYkgassas.... 271 +vl+ anq+ +ny+++a+ + + + +++ +il+Y+ga + 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 261 SVLVVANQPIDNYMMKANAKFrlS--TPENGFSILHYEGAAAPTtntr 306 *****************3333233..68999******99654336678 PP AA1.hmm 272 ................................................ 271 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 307 papakvpqvplgtplweynrfkmlpkeilpsqlnhpsfpnyydreivl 354 89999999**************************************** PP AA1.hmm 272 .................nvsfvepstsllea.ysgv............ 289 ++sf+ep +++l + ++g 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 355 ttsqrklndgsirmylnDISFEEPMSPILLDlLDGRrsrypnypmiqr 402 *****************9999999999998855555566777777666 PP AA1.hmm 290 ....detka..klkln.....................hp..lhghdfv 308 d+t+ ++ hp lhgh+f+ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 403 vdgyDTTRRtiP--VKlneviqvviqntatttgrcdqHPfhLHGHSFF 448 666554544443..444477788888999999**************** PP AA1.hmm 309 vv........nfd.....aedeak......rdtvavp........... 326 + + + + + rd+++v 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 449 DLgggnglysS-QelssmVS---NtsqhllRDVISVYperddttlryp 492 **988775531.14545433...1444799999955459999999999 PP AA1.hmm 327 ...kggwvvirfvadnpgvwllhchieaHlsmGla 358 ++gw ++rfvadnpgvw++hch++aH+ G++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 493 pgtPCGWRAFRFVADNPGVWVFHCHVTAHMMLGMQ 527 **99******************************6 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 206.6 0.4 1.1e-64 1.1e-64 1 331 [. 26 386 .. 26 391 .. 0.82 2 ? 0.7 0.1 0.048 0.048 74 103 .. 505 533 .. 493 543 .. 0.81 Alignments for each domain: == domain 1 score: 206.6 bits; conditional E-value: 1.1e-64 AA1_2.hmm 1 errvigvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqng 48 er ++ +N+ P p+i++++gd+++++++N++ e +++HfHG+ q g 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 26 ERYMVLINDGSPGPTIRAHTGDTLVINVHNSMASEVVAIHFHGILQTG 73 6899******************************************** PP AA1_2.hmm 49 tnamDGasmvtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGl 96 t + DG++ vtq p+ pg++++ e+++++qvGtY yH+H++ + + 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 74 TPQSDGVPYVTQWPVDPGKNYRHEIHLTNQVGTYFYHAHTSIHGMSA- 120 ****************************************9875443. PP AA1_2.hmm 97 rgpliiedke..epyeydeeltltlsdwYheeskelvkeflskynptg 142 g+l+iedk+ py+ydee ++ lsd+Yh++ +++++ +ls+ p 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 121 YGALVIEDKDdkPPYRYDEERIVLLSDFYHRDDHDIMSGLLST--PFR 166 478999987755899************************9885..444 PP AA1_2.hmm 143 aepipdsllv....................netenatlevepgktYll 170 p+++l + ++v+pg+tY++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 167 WIGDPQAILTngktyenwrcakgdlrcqktASCGYDVINVTPGRTYRF 214 44557888889999***********9976544455679********** PP AA1_2.hmm 171 riinvgafasqylvledhemtivevDGvdvepsevdslyiavaQRysv 218 rii + + +v+ h+mt++evDG +vep+++++l+i+++QRysv 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 215 RIIGAMLSTYLSFVIPHHTMTVIEVDGFYVEPVQINHLEINAGQRYSV 262 ************************************************ PP AA1_2.hmm 219 Lvkakndtsknyalvakmdetmldvvpddlqlnvtstlvydksaalae 266 Lv a n++ +ny++ a+ + l + + +++ + + ++++ ++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 263 LVVA-NQPIDNYMMKANAKFR-LSTPENGFSILHYEGAAAPTTNTRPA 308 **98.567889*998887654.45555555555544444444444444 PP AA1_2.hmm 267 astv......delealdDfklep.......lekeelleepdkeieldv 301 +++v + l +++ fk+ p l++ + + +d+ei l++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 309 PAKVpqvplgTPLWEYNRFKMLPkeilpsqLNHPSFPNYYDREIVLTT 356 4433222444333445555554411111113445566779******** PP AA1_2.hmm 302 emdnlkdgvnyaffNnitYvapkvptlltv 331 + ++l+dg + ++N+i++ +p p ll + 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 357 SQRKLNDGSIRMYLNDISFEEPMSPILLDL 386 *************************99865 PP == domain 2 score: 0.7 bits; conditional E-value: 0.048 AA1_2.hmm 74 tveeqvGtYWyHsHskgqYeDGlrgpliie 103 ++ G + +H+H +++ + G+++ + + 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 505 V-ADNPGVWVFHCHVTAHMMLGMQAIFEVG 533 4.4899*****************9988665 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 205.3 0.1 2.5e-64 2.5e-64 2 281 .. 21 306 .. 20 323 .. 0.87 Alignments for each domain: == domain 1 score: 205.3 bits; conditional E-value: 2.5e-64 AA1_1.hmm 2 spDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsi 49 +pD ++r +vl+n+ pgp i +++gd++ inv+n++ e +i 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 21 APDCYERYMVLINDGSPGPTIRAHTGDTLVINVHNSMASE----VVAI 64 69*********************************99865....679* PP AA1_1.hmm 50 hwhglfqkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHsh 97 h+hg++q+gt + dg+ vtq P+ pg+ + +++++++q Gt++YH+h 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 65 HFHGILQTGTPQSDGVPYVTQWPVDPGKNYRHEIHLTNQVGTYFYHAH 112 ************************************************ PP AA1_1.hmm 98 lstqycdglrGalvvydpedplkslydvddestvitladwyhtaakel 145 s + + Galv+ d++d yd e+ ++ l+d+yh +++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 113 TSIHGM-SAYGALVIEDKDDKPPYRYD---EERIVLLSDFYHRDDHDI 156 *98765.457**********9999994...78899*********9999 PP AA1_1.hmm 146 l........klvavadstlinGlg...........ryaggpeaelavv 174 + + + +++ l nG+ r +++++ + v+ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 157 MsgllstpfRWIGDPQAILTNGKTyenwrcakgdlRCQKTASCGYDVI 204 9899988885556677777777653333111111155556777899** PP AA1_1.hmm 175 nvekgkrYrfrlvsiscdpnftfsidghnltvieadgvntkpltvdsi 222 nv+ g+ Yrfr++ ++ f i +h++tvie+dg ++p++++++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 205 NVTPGRTYRFRIIGAMLSTYLSFVIPHHTMTVIEVDGFYVEPVQINHL 252 ************************************************ PP AA1_1.hmm 223 qifagqrysvvleanqevdnYwiranpnlgkntgfegginsailrykg 270 +i agqrysv++ anq++dnY ++an +++ ++ e+g +il+y+g 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 253 EINAGQRYSVLVVANQPIDNYMMKANAKFRL-STPENG--FSILHYEG 297 *****************************98.555555..68****** PP AA1_1.hmm 271 apeaePttkqk 281 a++ Ptt+++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 298 AAA--PTTNTR 306 976..555543 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 200.3 1.2 9.3e-63 9.3e-63 12 304 .. 7 305 .. 3 313 .. 0.87 2 ? 0.7 0.0 0.053 0.053 95 126 .. 496 527 .. 492 540 .. 0.84 Alignments for each domain: == domain 1 score: 200.3 bits; conditional E-value: 9.3e-63 AA1_3.hmm 12 vtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvk 59 + +ey+l+++++ apD +e+ ++l+n+ Pgpti+a+ GDtl+++v+ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 7 HLVEYNLTISQNYRAPDCYERYMVLINDGSPGPTIRAHTGDTLVINVH 54 5689******************************************** PP AA1_3.hmm 60 nnlkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefra.t 106 n++ ++ ++iH+HGi q+ t ++DGvp vtq p+ pg+++ e + + 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 55 NSMASEVVAIHFHGILQTGTPQSDGVPYVTQWPVDPGKNYRHEIHLtN 102 ******************************************987516 PP AA1_3.hmm 107 qyGtswYHsHyslQyadGvlGplvinGPasa.nydvdl.gpllltdws 152 q Gt +YH+H s+ + +G+lvi+ + +y +d + +ll+d++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 103 QVGTYFYHAHTSIH-GMSAYGALVIEDKDDKpPYRYDEeRIVLLSDFY 149 89**********96.5568******9985542676665267899**** PP AA1_3.hmm 153 hesafelveeae..asggppvadniLingknkvkkskk........ee 190 h++ +++++ + + iL ngk + + + ++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 150 HRDDHDIMSGLLstPFRWIGDPQAILTNGKTYENWRCAkgdlrcqkTA 197 ****99999988333344467889*****9866654445799997666 PP AA1_3.hmm 191 egeysevklekgkkyrlrlintsvdstfkfsidgHkltviaaDfvpie 238 + y +++++g++yr+r+i + ++++++f i +H++tvi+ D +e 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 198 SCGYDVINVTPGRTYRFRIIGAMLSTYLSFVIPHHTMTVIEVDGFYVE 245 778899****************************************** PP AA1_3.hmm 239 pyttdslligigqRydviveanqeeenywlraelaeaCsklnaeekei 286 p++ ++l i+ gqRy v+v anq +ny ++a+ + + s+ ++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 246 PVQINHLEINAGQRYSVLVVANQPIDNYMMKANAKFRLST----PENG 289 *********************************8765555....7899 PP AA1_3.hmm 287 kailrYeeassaeptska 304 +il+Ye+a pt+++ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 290 FSILHYEGAAA--PTTNT 305 9*******987..44443 PP == domain 2 score: 0.7 bits; conditional E-value: 0.053 AA1_3.hmm 95 pgesftYefratqyGtswYHsHyslQyadGvl 126 p + ++f a++ G +H H ++ ++ G+ 299409|Basme2finSC_GeneCatalog_proteins_20150701.aa.fasta|AA1 496 PCGWRAFRFVADNPGVWVFHCHVTAHMMLGMQ 527 5566789****************999888875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (547 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.01 # Mc/sec: 70.02 // Query: 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 [L=513] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.5e-92 299.0 1.2 1.8e-92 298.7 1.2 1.0 1 AA1.hmm 1.9e-57 182.8 0.2 1.9e-57 182.8 0.2 1.5 2 AA1_2.hmm 2.1e-49 156.3 0.0 3.2e-49 155.7 0.0 1.2 1 AA1_1.hmm 3.9e-49 155.5 0.0 9.3e-49 154.3 0.0 1.6 1 AA1_3.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 298.7 1.2 1.8e-92 1.8e-92 10 357 .. 30 491 .. 20 492 .. 0.85 Alignments for each domain: == domain 1 score: 298.7 bits; conditional E-value: 1.8e-92 AA1.hmm 10 svilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwaDGv 62 + +lvNg PgP i+a+e+D +++++ N+l++++ t+H+hGl+q+gt+++DGv 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 30 PQVLVNGISPGPVIRAKENDLLIINIINNLPKDEFTMHYHGLHQKGTPFYDGV 82 5689************************************************* PP AA1.hmm 63 agvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdpksk 115 ++ tq pi+p++s+++++++ +q G+y yHsH+++++ + Galii+ pk++ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 83 PFMTQLPIPPKQSYQHRINLVGQHGSYLYHSHTKTHALT-ALGALIID-PKDE 133 ***************************************.********.8777 PP AA1.hmm 116 e..kydvddeelvillsdwyhktaeellken.atgaepapdsllinGkgrlyn 165 e kyd eel+++lsd+ +++ +++ +++ ++ +s++in ++++ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 134 EpfKYD---EELILVLSDNLSASQGPSPPSEgKAKLNKLKNSTVINSNSNMD- 182 745555...899**********9998875552333344499*****997753. PP AA1.hmm 166 cssklevlkvepgktyrlrlinaalnaeltfsidnHkltvieaDgvyvkpyev 218 + k +v++v+p+k yrlrli+a++++ ++f+i++H l+v+e++g yvkp+++ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 183 RECKPTVFSVDPNKVYRLRLISATTKEYISFAIAGHVLEVVEVEGFYVKPVKL 235 333468*********************************************** PP AA1.hmm 219 dslqiapGqrydvllkanqsag.nywira.slds..aafdnttalailrYkg. 266 d + i++Gqry++l+k+n+s + ++ i+a sl+s + + a a l+Y + 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 236 DKIPIHSGQRYSILIKTNHSRKtEFNIHAhSLKSniN-DNPLIAFAKLSYLSd 287 ******************99955******88877542.377889999999764 PP AA1.hmm 267 ..assas.............................................. 271 + + 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 288 niN---Tsnsnnttirlgeiqpylrdfaasnlfvplnpvplkeatkkfyfrvt 337 441...34456788999999999****************************** PP AA1.hmm 272 ...............nvsfvepstsllea.ysgv....detka........kl 296 +++++p+ +ll++ y+++ d+ + k 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 338 heekeeeeaprwyvnGTTLKMPNFNLLKEaYKNNthtyDN--TnyqlvhleK- 387 **************988999*******9977666454422..1234454440. PP AA1.hmm 297 kln...................hp..lhghdfvvv.....nfdaedeak.... 319 hp lhgh+f+ + +++ +d ++ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 388 --DevievtiqntvdlaglcdnHPwhLHGHSFWDLgsgpgTYNPNDDKSlnki 438 ..14555556677888899999*************888776663333335678 PP AA1.hmm 320 ...rdtvavp............kggwvvirfvadnpgvwllhchieaHlsmGl 357 rdt+++ ++gw +irfv+dnpg+w++hchi H+ G+ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 439 pilRDTFTFSlnlpqgnltpkeDCGWHTIRFVTDNPGLWIFHCHILKHMDYGM 491 9998888777788888888888******************************9 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 182.8 0.2 1.9e-57 1.9e-57 5 330 .. 32 366 .. 29 373 .. 0.80 2 ? -3.6 0.2 0.99 0.99 16 43 .. 383 414 .. 379 418 .. 0.65 Alignments for each domain: == domain 1 score: 182.8 bits; conditional E-value: 1.9e-57 AA1_2.hmm 5 igvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasm 57 + vNg P p+i+++++d +++++ N+l + + ++H+HGl+q+gt +DG+++ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 32 VLVNGISPGPVIRAKENDLLIINIINNLPKDEFTMHYHGLHQKGTPFYDGVPF 84 669************************************************** PP AA1_2.hmm 58 vtqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedke.epy 109 +tq pipp+++++ ++++ q+G+Y yHsH+k++ l g+lii++k+ ep+ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 85 MTQLPIPPKQSYQHRINLVGQHGSYLYHSHTKTHALTAL-GALIIDPKDeEPF 136 **********************************99998.67777776659** PP AA1_2.hmm 110 eydeeltltlsdwYheeskelvke.flskynp.tgaepipdsllvnet.enat 159 +ydeel+l+lsd + + k n+ + i ++ ++++ + + 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 137 KYDEELILVLSDNLSASQGPSPPSeGKAKLNKlKNSTVINSNSNMDREcKPTV 189 ************99876655544325555554044445555666655427788 PP AA1_2.hmm 160 levepgktYllriinvgafasqylvledhemtivevDGvdvepsevdslyiav 212 ++v+p+k Y+lr+i+ ++ +++ +h +++vev+G +v+p++ d++ i + 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 190 FSVDPNKVYRLRLISATTKEYISFAIAGHVLEVVEVEGFYVKPVKLDKIPIHS 242 9**************************************************** PP AA1_2.hmm 213 aQRysvLvkakndtsknyalvakmdetmldvvp....ddlqlnvtstlvydks 261 +QRys+L+k++++++++++++a+ ++ ++ p ++l++ + + + +++ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 243 GQRYSILIKTNHSRKTEFNIHAHSLKSNINDNPliafAKLSYLSDNINTSNSN 295 *********************98776666533311113333333333333333 PP AA1_2.hmm 262 aalaeastvdel..ealdDfkleplekeelleepdkeieldvemdnlkdg.vn 311 +++ + ++ + ++ ++pl+ l+e++k++ ++v+ ++ ++ ++ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 296 NTTIRLGEIQPYlrDFAASNLFVPLNP-VPLKEATKKFYFRVTHEEKEEEeAP 347 333333345555644555556799999.88999999999*9999766554399 PP AA1_2.hmm 312 yaffNnitYvapkvptllt 330 + ++N++t ++p+ l 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 348 RWYVNGTTLKMPNFNLLKE 366 **********999877755 PP == domain 2 score: -3.6 bits; conditional E-value: 0.99 AA1_2.hmm 16 ievnkgdrvevkltNgled....entslHfHG 43 ++ +k++ +ev+++N ++ n H HG 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 383 VHLEKDEVIEVTIQNTVDLaglcDNHPWHLHG 414 78889999999999987532222345556665 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 155.7 0.0 3.2e-49 3.2e-49 3 274 .. 24 290 .. 22 313 .. 0.87 Alignments for each domain: == domain 1 score: 155.7 bits; conditional E-value: 3.2e-49 AA1_1.hmm 3 pDGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglf 55 p+ f vlvng pgp+i +k++d + in++n+L +++ ++h+hgl+ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 24 PNCFGSPQVLVNGISPGPVIRAKENDLLIINIINNLPKDEF----TMHYHGLH 72 77788899****************************98875....79****** PP AA1_1.hmm 56 qkgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglrG 108 qkgt + dg+ f+tq Pi p++s+++++++ +q G++ YHsh +t +l G 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 73 QKGTPFYDGVPFMTQLPIPPKQSYQHRINLVGQHGSYLYHSHTKTHALTAL-G 124 *********************************************999888.9 PP AA1_1.hmm 109 alvvydpedplkslydvddestvitladwyhtaakell......klvavadst 155 al++ dp+d y de+ ++ l+d + + kl + +st 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 125 ALII-DPKDEEPFKY---DEELILVLSDNLSASQGPSPpsegkaKLNKLKNST 173 9998.9***999999...5899******9865544444677776778999*** PP AA1_1.hmm 156 linGlgryaggpeaelavvnvekgkrYrfrlvsiscdpnftfsidghnltvie 208 +in ++ + + e + +v +v +k Yr+rl+s ++++ f+i gh l+v+e 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 174 VINSNSNM--DRECKPTVFSVDPNKVYRLRLISATTKEYISFAIAGHVLEVVE 224 ***87655..66788999*********************************** PP AA1_1.hmm 209 adgvntkpltvdsiqifagqrysvvleanqevd.nYwiranpnlgkntgfegg 260 ++g +kp++ d+i i +gqrys+++++n++ + ++ i+a++ ++ + + 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 225 VEGFYVKPVKLDKIPIHSGQRYSILIKTNHSRKtEFNIHAHSLKSN-INDNPL 276 *****************************97652788999877666.777777 PP AA1_1.hmm 261 insailrykgapea 274 i a l y + + + 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 277 IAFAKLSYLSDNIN 290 88888887665544 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 154.3 0.0 9.3e-49 9.3e-49 11 306 .. 8 298 .. 2 302 .. 0.88 Alignments for each domain: == domain 1 score: 154.3 bits; conditional E-value: 9.3e-49 AA1_3.hmm 11 gvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknnlk 63 ++ + y+l++t ++p + + +lvng Pgp+i+a+ D l +++ nnl 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 8 TKEVVYNLTITLGVANPNCFGSPQVLVNGISPGPVIRAKENDLLIINIINNLP 60 56778************************************************ PP AA1_3.hmm 64 knGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefr.atqyGtswYHs 115 k+ ++H+HG++q+ t +DGvp +tq pi+p +s++ + + + q+G+ YHs 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 61 KDEFTMHYHGLHQKGTPFYDGVPFMTQLPIPPKQSYQHRINlVGQHGSYLYHS 113 **************************************997367********* PP AA1_3.hmm 116 HyslQyadGvlGplvinGPasanydvdlg.pllltdwshesafelveeaeasg 167 H + + lG+l+i+ ++++ +d + l+l+d s ++ +++ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 114 HTKTHALT-ALGALIIDPKDEEPFKYDEElILVLSDNLSASQGPSPPSEGKAK 165 **998876.68******998887766664145567777777766666666789 PP AA1_3.hmm 168 gppvadniLingknkvkkskkeeegeysevklekgkkyrlrlintsvdstfkf 220 ++ ++++in + +++ e + + ++++++k yrlrli ++++++++f 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 166 LNKLKNSTVINSNSNMDR-----ECKPTVFSVDPNKVYRLRLISATTKEYISF 213 999999999999999888.....66788999********************** PP AA1_3.hmm 221 sidgHkltviaaDfvpiepyttdslligigqRydviveanqe.eenywlrael 272 +i gH l+v++ ++p++ d + i+ gqRy +++++n++ ++++ ++a+ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 214 AIAGHVLEVVEVEGFYVKPVKLDKIPIHSGQRYSILIKTNHSrKTEFNIHAHS 266 ****************************************99899******97 PP AA1_3.hmm 273 aeaCsklnaeekeikailrYeeassaeptskate 306 + s++n++ + a l+Y +++ ++ +s++t+ 312236|Conth1_GeneCatalog_proteins_20141003.aa.fasta|AA1 267 LK--SNINDNPLIAFAKLSYLSDNINTSNSNNTT 298 76..455688888999999988888777777655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (513 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.01s 00:00:00.02 Elapsed: 00:00:00.00 # Mc/sec: 106.79 // Query: 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 [L=335] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9.6e-43 135.1 0.0 1.2e-42 134.8 0.0 1.0 1 AA1.hmm 2.3e-17 51.1 0.0 3.5e-17 50.5 0.0 1.2 1 AA1_1.hmm 1.9e-13 38.3 0.0 4.1e-13 37.2 0.0 1.5 2 AA1_3.hmm 2.7e-13 37.7 0.0 7.6e-13 36.2 0.0 1.7 1 AA1_2.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 134.8 0.0 1.2e-42 1.2e-42 193 357 .. 30 314 .. 23 315 .. 0.85 Alignments for each domain: == domain 1 score: 134.8 bits; conditional E-value: 1.2e-42 AA1.hmm 193 eltfsidnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsagny 242 l+f + +H+lt ie+Dg+yv p+ v++l++apG r++vl+k++q++g+y 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 30 YLSFVLPKHTLTLIEVDGTYVAPTVVSHLEVAPGMRFSVLVKTDQPVGDY 79 5789999******************************************* PP AA1.hmm 243 wira.sldsaafdnttalailrYkgassas.................... 271 w+ a + +a +++l+ilrY+ga + + 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 80 WMTAsVRWRA-SGPSNGLSILRYSGAATPAtvpapapatlvrgppealew 128 ****555544.4889********9976544788999999999999999** PP AA1.hmm 272 ...........................................nvsfvep 278 nvs+++p 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 129 gqnltahptlrkrvmargpanltpvlearqlrtadgflrwamnNVSYALP 178 ************************************************** PP AA1.hmm 279 .stsllea.ysgv.....detka.klkln...................hp 301 ++slle+ ys++ et+ +l+ n hp 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 179 rDVSLLESaYSKTlaalpRETAViTLPSNgvvdvivqnlagpsgvceiHP 228 999999997776667776333336444445666667788899999999** PP AA1.hmm 302 ..lhghdfvvv........nfd......aedeak...rdtvavp...... 326 lhgh+f+ + + e + rd+vav 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 229 whLHGHSFWDLgggpgyydA-NstsatlPE---NpvyRDVVAVYpyggay 274 ***********999985530.233444444...1556****6666***** PP AA1.hmm 327 .........kggwvvirfvadnpgvwllhchieaHlsmGl 357 ++gw irfvadnpgvw++hchi +H+ mG+ 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 275 fqtalaaaaPCGWKRIRFVADNPGVWPFHCHIPSHMVMGM 314 ********9******************************9 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 50.5 0.0 3.5e-17 3.5e-17 196 273 .. 32 106 .. 10 120 .. 0.86 Alignments for each domain: == domain 1 score: 50.5 bits; conditional E-value: 3.5e-17 AA1_1.hmm 196 tfsidghnltvieadgvntkpltvdsiqifagqrysvvleanqevdnYwi 245 f + +h+lt+ie+dg+ + p+ v+++++ g r+sv+++++q+v++Yw+ 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 32 SFVLPKHTLTLIEVDGTYVAPTVVSHLEVAPGMRFSVLVKTDQPVGDYWM 81 677889******************************************** PP AA1_1.hmm 246 ranpnlgkntgfegginsailrykgape 273 a+ ++ +g ++g+ +ilry+ga++ 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 82 TASVRWRA-SGPSNGL--SILRYSGAAT 106 *****999.7777776..7******975 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.2 0.0 4.1e-13 4.1e-13 217 301 .. 30 108 .. 11 119 .. 0.88 2 ? -3.3 0.0 0.86 0.86 99 125 .. 288 314 .. 282 316 .. 0.79 Alignments for each domain: == domain 1 score: 37.2 bits; conditional E-value: 4.1e-13 AA1_3.hmm 217 tfkfsidgHkltviaaDfvpiepyttdslligigqRydviveanqeeeny 266 +++f + +H+lt+i+ D + p +++l ++ g R+ v+v+++q +++y 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 30 YLSFVLPKHTLTLIEVDGTYVAPTVVSHLEVAPGMRFSVLVKTDQPVGDY 79 57899********************************************* PP AA1_3.hmm 267 wlraelaeaCsklnaeekeikailrYeeassaept 301 w+ a+++ + s ++ +ilrY++a + p+ 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 80 WMTASVRWRASG----PSNGLSILRYSGAAT--PA 108 *****9887666....78999*****99987..33 PP == domain 2 score: -3.3 bits; conditional E-value: 0.86 AA1_3.hmm 99 ftYefratqyGtswYHsHyslQyadGv 125 + +f a++ G +H H+ + G+ 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 288 KRIRFVADNPGVWPFHCHIPSHMVMGM 314 56689999999999****988887776 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.2 0.0 7.6e-13 7.6e-13 181 329 .. 31 184 .. 24 191 .. 0.75 Alignments for each domain: == domain 1 score: 36.2 bits; conditional E-value: 7.6e-13 AA1_2.hmm 181 qylvledhemtivevDGvdvepsevdslyiavaQRysvLvkakndtskny 230 +vl h++t++evDG++v p+ v++l++a + R+svLvk+ ++ +y 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 31 LSFVLPKHTLTLIEVDGTYVAPTVVSHLEVAPGMRFSVLVKTD-QPVGDY 79 568999***********************************95.677899 PP AA1_2.hmm 231 alvakmdetmldvvpddlqlnvtstlvydksaalaeastv.....delea 275 +++a++ + + l++ s ++ + ++++t+ ++le 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 80 WMTASVRWRA-SGPSNGLSILRYSGAATPATVPAPAPATLvrgppEALEW 128 9999987665.334455665555555555565665555445667688888 PP AA1_2.hmm 276 ldDfkleplekeellee..pdkeieldvemdnlkdgvnyaffNnitYvap 323 ++++ +p+ +++++++ ++ + l+ + + dg + ++Nn++Y p 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 129 GQNLTAHPTLRKRVMARgpANLTPVLEARQLRTADGFLRWAMNNVSYALP 178 89999999877666654115666678888888899999999999999999 PP AA1_2.hmm 324 kvptll 329 + +ll 640099|Clapol1_1_GeneCatalog_proteins_20180327.aa.fasta|AA1 179 RDVSLL 184 876665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (335 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 78.68 // Query: 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 [L=536] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.2e-99 320.5 0.0 5.3e-99 320.2 0.0 1.0 1 AA1.hmm 2.6e-63 202.1 0.0 3.7e-63 201.6 0.0 1.1 1 AA1_3.hmm 6.8e-56 177.7 0.1 2.3e-55 176.0 0.0 1.8 2 AA1_2.hmm 4.6e-52 165.0 0.0 8.2e-52 164.2 0.0 1.3 1 AA1_1.hmm Domain annotation for each model (and alignments): >> AA1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 320.2 0.0 5.3e-99 5.3e-99 7 357 .. 39 518 .. 26 519 .. 0.77 Alignments for each domain: == domain 1 score: 320.2 bits; conditional E-value: 5.3e-99 AA1.hmm 7 versvilvNgqfPgPtieanegDtvvvtVtNklesegttiHwhGlrqlgtnwa 59 +++s +lvNg PgP i a+egD v+v+VtN ++g+tiH+hG+ q+gt++a 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 39 YKKSGLLVNGGSPGPPIIATEGDIVIVRVTNGH-TKGITIHFHGVAQRGTPFA 90 678899**************************5.79***************** PP AA1.hmm 60 DGvagvtqcpiapgksftYeftvteqaGtywyHsHvslqyadGlrGaliirdp 112 DGv+g++q i pg+ ++Y+++++ ++Gty+yH+H+ + +++ ++Galii+dp 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 91 DGVPGISQLSILPGEIYEYRWRAD-NSGTYFYHAHTRFDASS-VHGALIIHDP 141 ***********************9.*************9888.********** PP AA1.hmm 113 kskekydvddeelvillsdwyhktaeellkenatgaepa.....pdsllinGk 160 k+ yd ++ ++ll+d++hk++e+l+ + ++p p+++l+nG+ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 142 KEYLRYD---DDRILLLNDYWHKNDEKLYD-S-ILNKPVvwvgqPQAILLNGR 189 5554788...678****************4.3.34444448899********* PP AA1.hmm 161 grlync...........s.....sklevlkvepgktyrlrlinaalnaeltfs 197 + + s ++++ v +g+tyrlr+ina++ + ++++ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 190 AQES-HgssyssiassvSfpttgCGYSTIPVAQGNTYRLRVINAGALSYISLK 241 5533.1222333444341444444478************************** PP AA1.hmm 198 idnHkltvieaDgvyvkpyevdslqiapGqrydvllkanqsagnywira.sld 249 id+H++ +eaDg ++p++v++lqi+pGqry+vllka+q+ ++ywir ++ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 242 IDGHSMALVEADGYRTTPISVNHLQIGPGQRYSVLLKADQEISSYWIRLsAIW 294 *************************************************8777 PP AA1.hmm 250 saafdnttalailrYkgassas............................... 271 +++ + + ++l+Y+ga + + 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 295 DNSDAKIGGAGLLTYDGAMDITtapppidtsaslhhpdwilpqvhadsggpim 347 7433678899*******665555666666666667667777777777777777 PP AA1.hmm 272 ...........................nvsfvep....stsllea.ysgvdet 292 nvs+ tsll+ y+++ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 348 ptkaddvltltlsplirgnstekhmvnNVSYIDRgslmGTSLLDMaYREI--- 397 77777777776666666666666666544443332233333333323333... PP AA1.hmm 293 kaklkln......................................hp..lhgh 305 hp lhgh 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 398 ------DasrsanallkpipslsiypkgtvldviiqldakscldtHPwhLHGH 444 ......022333333344444455555566666666777799999******** PP AA1.hmm 306 dfvvv.....nfdaedeak........rdtvavp.........kggwvvirfv 336 +f+ + ++++ ak rdt +v +gw ir++ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 445 SFWDIgqgpgLYTETAGAKampfspvhRDTSIVYsqkdldganGCGWRRIRVK 497 *****776662333333334566788866665555666666669********* PP AA1.hmm 337 adnpgvwllhchieaHlsmGl 357 dnpg+w+lhch++aH+ mG+ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 498 LDNPGIWPLHCHVHAHMVMGM 518 ********************9 PP >> AA1_3.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 201.6 0.0 3.7e-63 3.7e-63 9 297 .. 18 314 .. 12 327 .. 0.89 Alignments for each domain: == domain 1 score: 201.6 bits; conditional E-value: 3.7e-63 AA1_3.hmm 9 ktgvtreytlevtestlapDGvekeallvngqyPgptieadWGDtlevtvknn 61 t vt++ +l++++ + D ++k+ llvng Pgp i a GD + v+v+n 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 18 YTPVTVRTNLTLSSGIWNGDCYKKSGLLVNGGSPGPPIIATEGDIVIVRVTNG 70 567888999*******************************************8 PP AA1_3.hmm 62 lkknGtsiHwHGirqlntneqDGvpgvtqCpiapgesftYefratqyGtswYH 114 + +G +iH+HG+ q t +DGvpg++q +i pge + Y++ra++ Gt +YH 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 71 HT-KGITIHFHGVAQRGTPFADGVPGISQLSILPGEIYEYRWRADNSGTYFYH 122 65.8************************************************* PP AA1_3.hmm 115 sHyslQyadGvlGplvinGPas.anydvdlgpllltdwshesafelveeaeas 166 +H ++ v G+l+i+ P++ yd d + lll+d+ h++ ++l+++ ++ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 123 AHTRFDAS-SVHGALIIHDPKEyLRYDDD-RILLLNDYWHKNDEKLYDSILNK 173 **999875.6**********762699988.7899**************99944 PP AA1_3.hmm 167 ggp..pvadniLingknkvkkskk...........eeegeysevklekgkkyr 206 + + iL+ng+++ ++ ++ +++ ys++ + +g++yr 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 174 PVVwvGQPQAILLNGRAQESHGSSyssiassvsfpTTGCGYSTIPVAQGNTYR 226 4432267899*******999977799********99999************** PP AA1_3.hmm 207 lrlintsvdstfkfsidgHkltviaaDfvpiepyttdslligigqRydvivea 259 lr+in+++ s+++++idgH++ +++aD +p+++++l+ig gqRy v+++a 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 227 LRVINAGALSYISLKIDGHSMALVEADGYRTTPISVNHLQIGPGQRYSVLLKA 279 ***************************************************** PP AA1_3.hmm 260 nqeeenywlraelaeaCsklnaeekeikailrYeeass 297 +qe ++yw+r + + s+ + +++l+Y++a + 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 280 DQEISSYWIRLSAIWDNSD---AKIGGAGLLTYDGAMD 314 **********886543333...4556677777777655 PP >> AA1_2.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 176.0 0.0 2.3e-55 2.3e-55 6 321 .. 45 379 .. 40 389 .. 0.85 2 ? -2.0 0.6 0.32 0.32 31 96 .. 433 518 .. 420 522 .. 0.68 Alignments for each domain: == domain 1 score: 176.0 bits; conditional E-value: 2.3e-55 AA1_2.hmm 6 gvNgqwPlpeievnkgdrvevkltNgledentslHfHGlfqngtnamDGasmv 58 vNg P p+i +++gd v+v++tNg ++ ++HfHG+ q+gt DG++++ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 45 LVNGGSPGPPIIATEGDIVIVRVTNGH-TKGITIHFHGVAQRGTPFADGVPGI 96 69************************8.889********************** PP AA1_2.hmm 59 tqCpippgetltYeftveeqvGtYWyHsHskgqYeDGlrgpliiedkeepyey 111 +q +i pge + Y+ ++ +++GtY yH+H++ + g+lii+d++e +y 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 97 SQLSILPGEIYEYRWRA-DNSGTYFYHAHTRFDA-SSVHGALIIHDPKEYLRY 147 *****************.***********99875.579*************** PP AA1_2.hmm 112 deeltltlsdwYheeskelvkeflskynptgaepipdsllv............ 152 d++ +l l d++h++ ++l +++l+ +p p+++l+ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 148 DDDRILLLNDYWHKNDEKLYDSILN--KPVVWVGQPQAILLngraqeshgssy 198 **********************987..78889999****************** PP AA1_2.hmm 153 ...........netenatlevepgktYllriinvgafasqylvledhemtive 194 t++v +g+tY+lr+in ga++ l +++h+m +ve 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 199 ssiassvsfptTGCGYSTIPVAQGNTYRLRVINAGALSYISLKIDGHSMALVE 251 *******9987667889************************************ PP AA1_2.hmm 195 vDGvdvepsevdslyiavaQRysvLvkakndtsknya.lvakmdetmldvvpd 246 +DG ++p +v++l+i +QRysvL+ka ++ s+ + l a d+ + 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 252 ADGYRTTPISVNHLQIGPGQRYSVLLKADQEISSYWIrLSAIWDN-------S 297 ****************************99877655313344443.......4 PP AA1_2.hmm 247 dlqlnvtstlvydksaalaeas.tvdel..ealdDfkleplek....eellee 292 d ++ l+yd + + ++a +d+ + D+ l +++ + ++ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 298 DAKIGGAGLLTYDGAMDITTAPpPIDTSasLHHPDWILPQVHAdsggPIMPTK 350 56677777777777777666654344332245567777666662222235567 PP AA1_2.hmm 293 pdkeieldvemdnlkdgvnyaffNnitYv 321 +d ++l+++ ++ +++ ++Nn++Y+ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 351 ADDVLTLTLSPLIRGNSTEKHMVNNVSYI 379 88888888888888888888888888887 PP == domain 2 score: -2.0 bits; conditional E-value: 0.32 AA1_2.hmm 31 gledentslHfHGlfqngt.....namDGasmvtqCpippgetltYef..... 73 l++++ lH H ++ g+ ++ Ga+++ p++ +++++Y+ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 433 CLDTHPWHLHGHSFWDIGQgpglyTETAGAKAMPFSPVHRDTSIVYSQkdldg 485 56556666666666666666666666777777777777777777777766677 PP AA1_2.hmm 74 ...........tveeqvGtYWyHsHskgqYeDGl 96 ++ ++ G + +H+H +++ + G+ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 486 angcgwrrirvKL-DNPGIWPLHCHVHAHMVMGM 518 7777777665445.78888889999988877776 PP >> AA1_1.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 164.2 0.0 8.2e-52 8.2e-52 4 273 .. 37 314 .. 35 332 .. 0.88 Alignments for each domain: == domain 1 score: 164.2 bits; conditional E-value: 8.2e-52 AA1_1.hmm 4 DGfsrsavlvngtfpgplitgkkgdkfkinvvneLtdetmlkstsihwhglfq 56 D +++s lvng pgp i +++gd + ++v+n +k +ih+hg+ q 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 37 DCYKKSGLLVNGGSPGPPIIATEGDIVIVRVTNGH-----TKGITIHFHGVAQ 84 8899***************************9864.....57899******** PP AA1_1.hmm 57 kgtnwadgpafvtqCPiapgnsflydfkvpdqaGtfwYHshlstqycdglrGa 109 +gt +adg+ ++q i pg+ ++y+ ++ d++Gt++YH+h + +++Ga 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 85 RGTPFADGVPGISQLSILPGEIYEYRWRA-DNSGTYFYHAHTRFDA-SSVHGA 135 ***************************98.899********99885.799*** PP AA1_1.hmm 110 lvvydpedplkslydvddestvitladwyhtaakell........klvavads 154 l+++dp++ l+ y d++ ++ l d++h++ ++l v ++++ 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 136 LIIHDPKEYLR--Y---DDDRILLLNDYWHKNDEKLYdsilnkpvVWVGQPQA 183 ***99987665..4...5678***********9999888887765556799** PP AA1_1.hmm 155 tlinGlgryagg..............peaelavvnvekgkrYrfrlvsiscdp 193 l+nG+++ ++g + ++++ v++g+ Yr+r+++ + + 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 184 ILLNGRAQESHGssyssiassvsfptTGCGYSTIPVAQGNTYRLRVINAGALS 236 ******999987788888888888444445899******************** PP AA1_1.hmm 194 nftfsidghnltvieadgvntkpltvdsiqifagqrysvvleanqevdnYwir 246 ++idgh++ ++eadg t+p++v+++qi gqrysv+l+a+qe++ Ywir 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 237 YISLKIDGHSMALVEADGYRTTPISVNHLQIGPGQRYSVLLKADQEISSYWIR 289 ***************************************************** PP AA1_1.hmm 247 anpnlgkntgfeggi.nsailrykgape 273 + + +++i +l y+ga + 1547|Pipcy3_1_GeneCatalog_proteins_20160615.aa.fasta|AA1 290 LSAIWDN---SDAKIgGAGLLTYDGAMD 314 8887766...233330356899999875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (536 residues searched) Target model(s): 4 (1310 nodes) Passed MSV filter: 4 (1); expected 0.1 (0.02) Passed bias filter: 4 (1); expected 0.1 (0.02) Passed Vit filter: 4 (1); expected 0.0 (0.001) Passed Fwd filter: 4 (1); expected 0.0 (1e-05) Initial search space (Z): 4 [actual number of targets] Domain search space (domZ): 4 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 110.99 // [ok]