# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/AA10/fasta_for_each_cluster/cluster_95.txt # target HMM database: merged_hmms/AA10.hmm # per-dom hits tabular output: hmmscan_out/domain_result/AA10/AA10_cluster_95.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: UZW18968.1|AA10 [L=525] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.8e-34 104.9 0.0 6.4e-34 104.1 0.0 1.4 1 AA10.hmm Domain annotation for each model (and alignments): >> AA10.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 104.1 0.0 6.4e-34 6.4e-34 1 177 [. 29 241 .. 29 242 .. 0.84 Alignments for each domain: == domain 1 score: 104.1 bits; conditional E-value: 6.4e-34 AA10.hmm 1 HGyvssPasRqylCkeeggn.....gsaqyepacvealkg.fpee....gaaaaaqy..................avvpdgklcsagakkedfs 66 HG+v++P+sR+ +C+ +gg gs ++++ c+ea+++ f+++ aa q+ a++pdg++c+a++ +++ UZW18968.1|AA10 29 HGAVETPPSRALNCYVTGGHwgsanGSSIKDEGCREAFTKtFNSTndwaI--AADQWhevakipeinhptldqikAIIPDGHICAANDP--KKA 118 ***************977778889569***********885443343330..3444478889999********************7763..49* PP AA10.hmm 67 gldeqssdWp..ktkitagekltftwkltapHktsyfeyyiTkpgwdp.nkpLtwadleltefi.....skedknaspka.....kvtheikvn 147 +ld +++ W+ k+++ +g++l ++ t H +s+f +iT+pg++ ++ L+w+dl + + +k ++n +p+a + + i+ + UZW18968.1|AA10 119 SLDYPTPLWTkyKENVVPGQSLAIRLVGTILHVPSTFYAFITRPGFNSaTDVLKWSDL--IALGgperlEKAYTNWNPPAllpglAGFYVINRT 210 *********94455666*****************************************..333377777333333334446789999******* PP AA10.hmm 148 lPedrsgrhvilavWqr.adtgeaFynciDv 177 +P++ sg+ +++ +W r ++ ge F +c+Dv UZW18968.1|AA10 211 IPSNASGNGLVVGIWVRdDPNGEFFISCSDV 241 *****************8899*********9 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (525 residues searched) Target model(s): 1 (178 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 62.76 // Query: UZW23617.1|AA10 [L=525] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.8e-34 104.9 0.0 6.4e-34 104.1 0.0 1.4 1 AA10.hmm Domain annotation for each model (and alignments): >> AA10.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 104.1 0.0 6.4e-34 6.4e-34 1 177 [. 29 241 .. 29 242 .. 0.84 Alignments for each domain: == domain 1 score: 104.1 bits; conditional E-value: 6.4e-34 AA10.hmm 1 HGyvssPasRqylCkeeggn.....gsaqyepacvealkg.fpee....gaaaaaqy..................avvpdgklcsagakkedfs 66 HG+v++P+sR+ +C+ +gg gs ++++ c+ea+++ f+++ aa q+ a++pdg++c+a++ +++ UZW23617.1|AA10 29 HGAVETPPSRALNCYVTGGHwgsanGSSIKDEGCREAFTKtFNSTndwaI--AADQWhevakipeinhptldqikAIIPDGHICAANDP--KKA 118 ***************977778889569***********885443343330..3444478889999********************7763..49* PP AA10.hmm 67 gldeqssdWp..ktkitagekltftwkltapHktsyfeyyiTkpgwdp.nkpLtwadleltefi.....skedknaspka.....kvtheikvn 147 +ld +++ W+ k+++ +g++l ++ t H +s+f +iT+pg++ ++ L+w+dl + + +k ++n +p+a + + i+ + UZW23617.1|AA10 119 SLDYPTPLWTkyKENVVPGQSLAIRLVGTILHVPSTFYAFITRPGFNSaTDVLKWSDL--IALGgperlEKAYTNWNPPAllpglAGFYVINRT 210 *********94455666*****************************************..333377777333333334446789999******* PP AA10.hmm 148 lPedrsgrhvilavWqr.adtgeaFynciDv 177 +P++ sg+ +++ +W r ++ ge F +c+Dv UZW23617.1|AA10 211 IPSNASGNGLVVGIWVRdDPNGEFFISCSDV 241 *****************8899*********9 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (525 residues searched) Target model(s): 1 (178 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 89.41 // Query: UZW28679.1|AA10 [L=525] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.8e-34 104.9 0.0 6.4e-34 104.1 0.0 1.4 1 AA10.hmm Domain annotation for each model (and alignments): >> AA10.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 104.1 0.0 6.4e-34 6.4e-34 1 177 [. 29 241 .. 29 242 .. 0.84 Alignments for each domain: == domain 1 score: 104.1 bits; conditional E-value: 6.4e-34 AA10.hmm 1 HGyvssPasRqylCkeeggn.....gsaqyepacvealkg.fpee....gaaaaaqy..................avvpdgklcsagakkedfs 66 HG+v++P+sR+ +C+ +gg gs ++++ c+ea+++ f+++ aa q+ a++pdg++c+a++ +++ UZW28679.1|AA10 29 HGAVETPPSRALNCYVTGGHwgsanGSSIKDEGCREAFTKtFNSTndwaI--AADQWhevakipeinhptldqikAIIPDGHICAANDP--KKA 118 ***************977778889569***********885443343330..3444478889999********************7763..49* PP AA10.hmm 67 gldeqssdWp..ktkitagekltftwkltapHktsyfeyyiTkpgwdp.nkpLtwadleltefi.....skedknaspka.....kvtheikvn 147 +ld +++ W+ k+++ +g++l ++ t H +s+f +iT+pg++ ++ L+w+dl + + +k ++n +p+a + + i+ + UZW28679.1|AA10 119 SLDYPTPLWTkyKENVVPGQSLAIRLVGTILHVPSTFYAFITRPGFNSaTDVLKWSDL--IALGgperlEKAYTNWNPPAllpglAGFYVINRT 210 *********94455666*****************************************..333377777333333334446789999******* PP AA10.hmm 148 lPedrsgrhvilavWqr.adtgeaFynciDv 177 +P++ sg+ +++ +W r ++ ge F +c+Dv UZW28679.1|AA10 211 IPSNASGNGLVVGIWVRdDPNGEFFISCSDV 241 *****************8899*********9 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (525 residues searched) Target model(s): 1 (178 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 91.59 // Query: WKV96309.1|AA10 [L=164] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.5e-17 50.9 0.0 1.8e-17 50.6 0.0 1.1 1 AA10.hmm Domain annotation for each model (and alignments): >> AA10.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 50.6 0.0 1.8e-17 1.8e-17 1 97 [. 26 145 .. 26 152 .. 0.88 Alignments for each domain: == domain 1 score: 50.6 bits; conditional E-value: 1.8e-17 AA10.hmm 1 HGyvssPasRqylCkeeggn.....gsaqyepacvealkgfpee.gaa.aaaqy..................avvpdgklcsagakkedfsgld 69 HG+++ PasR+++C+++gg+ gs + ++ c+e k f++ ++a aa+q+ a+++d ++c+a++ ++++ld WKV96309.1|AA10 26 HGALDFPASRAVNCQATGGYwqsedGSSIVDKGCRESAKLFNTPaEKAfAAQQWnevahipeidnpsldqikAIIKDDQICAAND--PRKASLD 117 ***************988888899669***********99877643345666669999**************9*********666..359**** PP AA10.hmm 70 eqssdWpktkitagekltftwkltapHk 97 +++ W+kt++ +g+ lt++ tap + WKV96309.1|AA10 118 YPTPFWTKTDVVSGQALTLRLIGTAPMS 145 *******************999999866 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (164 residues searched) Target model(s): 1 (178 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 57.36 // Query: BFY66043.1|AA10|CBM73 [L=345] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7e-09 22.6 0.0 1.4e-08 21.6 0.0 1.5 1 AA10.hmm Domain annotation for each model (and alignments): >> AA10.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.6 0.0 1.4e-08 1.4e-08 142 177 .. 32 68 .. 7 69 .. 0.85 Alignments for each domain: == domain 1 score: 21.6 bits; conditional E-value: 1.4e-08 AA10.hmm 142 heikvnlPedrsgrhvilavWqr.adtgeaFynciDv 177 +++ +P++ +g +vi++vW r +d ge+F c+Dv BFY66043.1|AA10|CBM73 32 VTLPTAIPNGLNGPAVIVTVWARdDDKGETFVMCSDV 68 566779*****************99***********9 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (345 residues searched) Target model(s): 1 (178 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 156.15 // Query: WLH40529.1|AA10 [L=523] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9.5e-34 103.6 0.0 1.9e-33 102.6 0.0 1.5 1 AA10.hmm Domain annotation for each model (and alignments): >> AA10.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 102.6 0.0 1.9e-33 1.9e-33 1 177 [. 29 241 .. 29 242 .. 0.83 Alignments for each domain: == domain 1 score: 102.6 bits; conditional E-value: 1.9e-33 AA10.hmm 1 HGyvssPasRqylCkeeggn.....gsaqyepacvealkgfpee......gaaaaaqy..................avvpdgklcsagakkedf 65 HG+v++P+sR+ +C+ +gg+ gs + ++ c+ea+++ ++ + a q+ a++pdg++c+a++ + WLH40529.1|AA10 29 HGAVETPPSRALNCYVTGGQwgsdnGSSINDEGCREAFTKTFNSrydwaiA---ADQWhevakipninhptldqikAIIPDGHICAAND-PI-K 117 ****************88878889559***********8844443654331...44447778899999******************666.44.9 PP AA10.hmm 66 sgldeqssdWpktkit..agekltftwkltapHktsyfeyyiTkpgwdp.nkpLtwadleltefi.......skedknaspka.....kvthei 144 ++ld +++ W+k + + +g++l ++ t H +s+f+ +iT+pg++ ++ L+w+dl + + ++n +p+a + + i WLH40529.1|AA10 118 ASLDYPTPLWTKYEKNvvPGQSLAIRLVGTILHVPSTFNAFITRPGFNSaTDVLKWSDL--IALGgperlekA--YTNWNPDAllpglAGFYVI 207 9******999975544449****************************************..333377776432..333333336778999**** PP AA10.hmm 145 kvnlPedrsgrhvilavWqr.adtgeaFynciDv 177 + ++P++ sg+ +++ +W r ++ ge F +c+Dv WLH40529.1|AA10 208 NRTIPSNASGNGLVVGIWVRdDPNGEFFISCSDV 241 ********************8899*********9 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (523 residues searched) Target model(s): 1 (178 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 110.07 // [ok]