[samfaipath] build FASTA index... [M::mm_idx_gen::16.802*1.64] collected minimizers [M::mm_idx_gen::19.754*3.08] sorted minimizers [M::main::19.793*3.08] loaded/built the index for 120351 target sequence(s) [M::mm_mapopt_update::22.000*2.87] mid_occ = 50 [M::mm_idx_stat] kmer size: 19; skip: 19; is_hpc: 0; #seq: 120351 [M::mm_idx_stat::23.307*2.77] distinct minimizers: 55621721 (66.86% are singletons); average occurrences: 1.683; average spacing: 10.027; total length: 938787250 [M::worker_pipeline::460.840*26.41] mapped 1427250 sequences [M::worker_pipeline::469.217*26.23] mapped 215968 sequences [M::main] Version: 2.24-r1155-dirty [M::main] CMD: flye-minimap2 -x map-hifi -t 32 -a -p 0.5 -N 10 --sam-hit-only -L -K 5G -z 1000 -Q --secondary-seq -I 64G /mnt/array1/jinfang/dbCAN_protocol/HIFI_samples/clean_samples/flye_SRF_MG/00-assembly/draft_assembly.fasta /mnt/array1/jinfang/dbCAN_protocol/HIFI_samples/clean_samples/SRF_MG.clean.fq.gz [M::main] Real time: 469.823 sec; CPU: 12309.019 sec; Peak RSS: 17.341 GB [bam_sort_core] merging from 0 files and 4 in-memory blocks...