##gff-version 3 ##sequence-region RHLF01000001 1 16949 # conversion-by bp_genbank2gff3.pl # organism Muricauda sp. # Note Muricauda sp. isolate Bin2 contig1, whole genome shotgun sequence. # date 05-NOV-2018 RHLF01000001 GenBank region 1 16949 . + 1 ID=RHLF01000001;Dbxref=BioProject:PRJNA497203,taxon:192149;Name=RHLF01000001;Note=Muricauda sp. isolate Bin2 contig1%2C whole genome shotgun sequence.,Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ \n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.11.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 40x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##,metagenomic;collection_date=2015-04;comment1=Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ \n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.11.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 40x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##;country=China: South China Sea;date=05-NOV-2018;environmental_sample=_no_value;isolate=Bin2;isolation_source=Synechococcus sp. YX04-3 co-culture from sea water;metagenome_source=marine metagenome;mol_type=genomic DNA;organism=Muricauda sp.;submitter_seqid=contig1 RHLF01000001 GenBank gene 1 1590 . + 1 ID=ED555_05795;Name=ED555_05795 RHLF01000001 GenBank mRNA 1 1590 . + 1 ID=ED555_05795.t01;Parent=ED555_05795 RHLF01000001 GenBank CDS 1 1590 . + 1 ID=ED555_05795.p01;Parent=ED555_05795.t01;Name=ED555_05795;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010518153.1;product=solute:sodium symporter family transporter;protein_id=RNC92589.1;transl_table=11;translation=length.529 RHLF01000001 GenBank exon 1 1590 . + 1 Parent=ED555_05795.t01 RHLF01000001 GenBank gene 1660 3291 . - 1 ID=ED555_05800;Name=ED555_05800 RHLF01000001 GenBank mRNA 1660 3291 . - 1 ID=ED555_05800.t01;Parent=ED555_05800 RHLF01000001 GenBank CDS 1660 3291 . - 1 ID=ED555_05800.p01;Parent=ED555_05800.t01;Name=ED555_05800;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006990373.1;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=RNC92590.1;transl_table=11;translation=length.543 RHLF01000001 GenBank exon 1660 3291 . - 1 Parent=ED555_05800.t01 RHLF01000001 GenBank gene 3312 6440 . - 1 ID=ED555_05805;Name=ED555_05805 RHLF01000001 GenBank mRNA 3312 6440 . - 1 ID=ED555_05805.t01;Parent=ED555_05805 RHLF01000001 GenBank CDS 3312 6440 . - 1 ID=ED555_05805.p01;Parent=ED555_05805.t01;Name=ED555_05805;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015753701.1;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=RNC92591.1;transl_table=11;translation=length.1042 RHLF01000001 GenBank exon 3312 6440 . - 1 Parent=ED555_05805.t01 RHLF01000001 GenBank gene 6808 7830 . + 1 ID=ED555_05810;Name=ED555_05810 RHLF01000001 GenBank mRNA 6808 7830 . + 1 ID=ED555_05810.t01;Parent=ED555_05810 RHLF01000001 GenBank CDS 6808 7830 . + 1 ID=ED555_05810.p01;Parent=ED555_05810.t01;Name=ED555_05810;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010518165.1;product=LacI family transcriptional regulator;protein_id=RNC92592.1;transl_table=11;translation=length.340 RHLF01000001 GenBank exon 6808 7830 . + 1 Parent=ED555_05810.t01 RHLF01000001 GenBank gene 7864 10167 . + 1 ID=ED555_05815;Name=ED555_05815 RHLF01000001 GenBank mRNA 7864 10167 . + 1 ID=ED555_05815.t01;Parent=ED555_05815 RHLF01000001 GenBank CDS 7864 10167 . + 1 ID=ED555_05815.p01;Parent=ED555_05815.t01;Name=ED555_05815;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013306293.1;product=glycoside hydrolase family 65 protein;protein_id=RNC92593.1;transl_table=11;translation=length.767 RHLF01000001 GenBank exon 7864 10167 . + 1 Parent=ED555_05815.t01 RHLF01000001 GenBank gene 10164 12035 . + 1 ID=ED555_05820;Name=ED555_05820 RHLF01000001 GenBank mRNA 10164 12035 . + 1 ID=ED555_05820.t01;Parent=ED555_05820 RHLF01000001 GenBank CDS 10164 12035 . + 1 ID=ED555_05820.p01;Parent=ED555_05820.t01;Name=ED555_05820;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013549789.1;product=alpha-amylase;protein_id=RNC92594.1;transl_table=11;translation=length.623 RHLF01000001 GenBank exon 10164 12035 . + 1 Parent=ED555_05820.t01 RHLF01000001 GenBank gene 12082 12504 . - 1 ID=ED555_05825;Name=ED555_05825 RHLF01000001 GenBank mRNA 12082 12504 . - 1 ID=ED555_05825.t01;Parent=ED555_05825 RHLF01000001 GenBank CDS 12082 12504 . - 1 ID=ED555_05825.p01;Parent=ED555_05825.t01;Name=ED555_05825;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015753707.1;product=hypothetical protein;protein_id=RNC92595.1;transl_table=11;translation=length.140 RHLF01000001 GenBank exon 12082 12504 . - 1 Parent=ED555_05825.t01 RHLF01000001 GenBank gene 12691 13443 . + 1 ID=ED555_05830;Name=ED555_05830 RHLF01000001 GenBank mRNA 12691 13443 . + 1 ID=ED555_05830.t01;Parent=ED555_05830 RHLF01000001 GenBank CDS 12691 13443 . + 1 ID=ED555_05830.p01;Parent=ED555_05830.t01;Name=ED555_05830;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019669008.1;product=glycerophosphodiester phosphodiesterase;protein_id=RNC92596.1;transl_table=11;translation=length.250 RHLF01000001 GenBank exon 12691 13443 . + 1 Parent=ED555_05830.t01 RHLF01000001 GenBank gene 13443 14714 . + 1 ID=ED555_05835;Name=ED555_05835 RHLF01000001 GenBank mRNA 13443 14714 . + 1 ID=ED555_05835.t01;Parent=ED555_05835 RHLF01000001 GenBank CDS 13443 14714 . + 1 ID=ED555_05835.p01;Parent=ED555_05835.t01;Name=ED555_05835;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013306296.1;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RNC92597.1;transl_table=11;translation=length.423 RHLF01000001 GenBank exon 13443 14714 . + 1 Parent=ED555_05835.t01 RHLF01000001 GenBank gene 14711 15442 . - 1 ID=ED555_05840;Name=ED555_05840 RHLF01000001 GenBank mRNA 14711 15442 . - 1 ID=ED555_05840.t01;Parent=ED555_05840 RHLF01000001 GenBank CDS 14711 15442 . - 1 ID=ED555_05840.p01;Parent=ED555_05840.t01;Name=ED555_05840;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010518173.1;product=aquaporin family protein;protein_id=RNC92598.1;transl_table=11;translation=length.243 RHLF01000001 GenBank exon 14711 15442 . - 1 Parent=ED555_05840.t01 RHLF01000001 GenBank gene 15453 16949 . - 1 ID=ED555_05845;Name=glpK;locus_tag=ED555_05845 RHLF01000001 GenBank mRNA 15453 16949 . - 1 ID=ED555_05845.t01;Parent=ED555_05845 RHLF01000001 GenBank CDS 15453 16949 . - 1 ID=ED555_05845.p01;Parent=ED555_05845.t01;eC_number=2.7.1.30;Name=glpK;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013620371.1;locus_tag=ED555_05845;product=glycerol kinase;protein_id=RNC92599.1;transl_table=11;translation=length.498 RHLF01000001 GenBank exon 15453 16949 . - 1 Parent=ED555_05845.t01