##gff-version 3
##sequence-region CR626927 1 17455
# conversion-by bp_genbank2gff3.pl
# organism Bacteroides fragilis NCTC 9343
# Note Bacteroides fragilis NCTC 9343, complete genome.
# date 06-FEB-2015
CR626927	GenBank	region	1	17455	.	+	1	ID=CR626927;Dbxref=BioProject:PRJNA46,taxon:272559;Name=CR626927;Note=Bacteroides fragilis NCTC 9343%2C complete genome.,Accession number for plasmid pBF9343 in this genome project: CR626928. ;comment1=Accession number for plasmid pBF9343 in this genome project: CR626928. ;culture_collection=ATCC:25285,NCTC:9343;date=06-FEB-2015;mol_type=genomic DNA;organism=Bacteroides fragilis NCTC 9343;type_material=type strain of Bacteroides fragilis
CR626927	GenBank	gene	1	1143	.	-	1	ID=BF9343_1964;Name=BF9343_1964
CR626927	GenBank	gene_component_region	1	69	.	-	1	Parent=BF9343_1964;Name=BF9343_1964;Note=4 probable transmembrane helices predicted for BF2048 by TMHMM2.0 at aa 7-29%2C 303-325%2C 327-349 and 359-381
CR626927	GenBank	gene_component_region	97	165	.	-	1	Parent=BF9343_1964;Name=BF9343_1964;Note=4 probable transmembrane helices predicted for BF2048 by TMHMM2.0 at aa 7-29%2C 303-325%2C 327-349 and 359-381
CR626927	GenBank	gene_component_region	169	237	.	-	1	Parent=BF9343_1964;Name=BF9343_1964;Note=4 probable transmembrane helices predicted for BF2048 by TMHMM2.0 at aa 7-29%2C 303-325%2C 327-349 and 359-381
CR626927	GenBank	gene_component_region	1057	1125	.	-	1	Parent=BF9343_1964;Name=BF9343_1964;Note=4 probable transmembrane helices predicted for BF2048 by TMHMM2.0 at aa 7-29%2C 303-325%2C 327-349 and 359-381
CR626927	GenBank	gene_component_region	490	981	.	-	1	Parent=BF9343_1964;Name=BF9343_1964;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 50.1%2C E-value 4.1e-12
CR626927	GenBank	mRNA	1	1143	.	-	1	ID=BF9343_1964.t01;Parent=BF9343_1964
CR626927	GenBank	CDS	1	1143	.	-	1	ID=BF9343_1964.p01;Parent=BF9343_1964.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1964,EnsemblGenomes-Tr:CAH07745,GOA:Q5LDR2,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LDR2;Name=BF9343_1964;Note=Similar to Staphylococcus aureus intercellular adhesin molecule IcaA SWALL:Q9RQP9 (EMBL:AF086783) (412 aa) fasta scores: E(): 1.3e-09%2C 22.3%25 id in 417 aa%2C and to N-terminus of Bacteroides thetaiotaomicron two-component system sensor histidine kinase/response regulator%2C hybrid BT1183 SWALL:AAO76290 (EMBL:AE016930) (1336 aa) fasta scores: E(): 8.7e-124%2C 77.83%25 id in 397 aa%2C and to entire protein of Vibrio vulnificus glycosyltransferase VV12674 SWALL:Q8D9C9 (EMBL:AE016806) (409 aa) fasta scores: E(): 1.1e-28%2C 28.97%25 id in 421 aa;codon_start=1;old_locus_tag=BF2048;product=putative transmembrane glycosyltransferase;protein_id=CAH07745.1;transl_table=11;translation=length.402
CR626927	GenBank	exon	1	1143	.	-	1	Parent=BF9343_1964.t01
CR626927	GenBank	gene	1152	2564	.	-	1	ID=BF9343_1965;Name=BF9343_1965
CR626927	GenBank	gene_component_region	2499	2564	.	-	1	Parent=BF9343_1965;Name=BF9343_1965;Note=Signal peptide predicted for BF2049 by SignalP 2.0 HMM (Signal peptide probability 0.968) with cleavage site probability 0.652 between residues 22 and 23
CR626927	GenBank	gene_component_region	2505	2537	.	-	1	Parent=BF9343_1965;Name=BF9343_1965;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
CR626927	GenBank	mRNA	1152	2564	.	-	1	ID=BF9343_1965.t01;Parent=BF9343_1965
CR626927	GenBank	CDS	1152	2564	.	-	1	ID=BF9343_1965.p01;Parent=BF9343_1965.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1965,EnsemblGenomes-Tr:CAH07746,UniProtKB/TrEMBL:Q5LDR1;Name=BF9343_1965;Note=Similar to Bacteroides thetaiotaomicron hypothetical protein BT1182 SWALL:AAO76289 (EMBL:AE016930) (500 aa) fasta scores: E(): 2.3e-74%2C 46.18%25 id in 498 aa;codon_start=1;old_locus_tag=BF2049;product=conserved hypothetical protein;protein_id=CAH07746.1;transl_table=11;translation=length.470
CR626927	GenBank	exon	1152	2564	.	-	1	Parent=BF9343_1965.t01
CR626927	GenBank	gene	2561	3727	.	-	1	ID=BF9343_1966;Name=BF9343_1966
CR626927	GenBank	gene_component_region	2624	3682	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=Pfam match to entry PF01757 Acyl_transf_3%2C Acyltransferase family%2C score 44.1%2C E-value 2.6e-10
CR626927	GenBank	gene_component_region	2645	2713	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	2771	2830	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	2843	2911	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	2924	2992	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	3011	3079	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	3092	3160	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	3179	3247	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	3329	3397	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	3458	3526	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	gene_component_region	3593	3661	.	-	1	Parent=BF9343_1966;Name=BF9343_1966;Note=10 probable transmembrane helices predicted for BF2050 by TMHMM2.0 at aa 23-45%2C 68-90%2C 111-133%2C 161-183%2C 190-212%2C 217-239%2C 246-268%2C 273-295%2C 300-319 and 339-361
CR626927	GenBank	mRNA	2561	3727	.	-	1	ID=BF9343_1966.t01;Parent=BF9343_1966
CR626927	GenBank	CDS	2561	3727	.	-	1	ID=BF9343_1966.p01;Parent=BF9343_1966.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1966,EnsemblGenomes-Tr:CAH07747,GOA:Q5LDR0,InterPro:IPR002656,UniProtKB/TrEMBL:Q5LDR0;Name=BF9343_1966;Note=Similar to Bacteroides thetaiotaomicron acyltransferase BT1546 SWALL:AAO76653 (EMBL:AE016932) (335 aa) fasta scores: E(): 9.9e-09%2C 25.59%25 id in 336 aa%2C and to Pseudomonas aeruginosa domain of unknown function Duf33 SWALL:Q8KIR7 (EMBL:AF498413) (629 aa) fasta scores: E(): 1.2e-08%2C 26.19%25 id in 313 aa%2C and to Pseudomonas aeruginosa domain of unknown function Duf33 SWALL:Q8KI23 (EMBL:AF498410) (629 aa) fasta scores: E(): 2.1e-08%2C 26.19%25 id in 313 aa;codon_start=1;old_locus_tag=BF2050;product=putative transmembrane acyltransferase;protein_id=CAH07747.1;transl_table=11;translation=length.388
CR626927	GenBank	exon	2561	3727	.	-	1	Parent=BF9343_1966.t01
CR626927	GenBank	gene	3724	4575	.	-	1	ID=BF9343_1967;Name=BF9343_1967
CR626927	GenBank	gene_component_region	3970	4455	.	-	1	Parent=BF9343_1967;Name=BF9343_1967;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 56.0%2C E-value 6.9e-14
CR626927	GenBank	mRNA	3724	4575	.	-	1	ID=BF9343_1967.t01;Parent=BF9343_1967
CR626927	GenBank	CDS	3724	4575	.	-	1	ID=BF9343_1967.p01;Parent=BF9343_1967.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1967,EnsemblGenomes-Tr:CAH07748,GOA:Q5LDQ9,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LDQ9;Name=BF9343_1967;Note=Similar to Bacteroides thetaiotaomicron glycosyltransferase involved in cell wall biogenesis BT1181 SWALL:AAO76288 (EMBL:AE016930) (283 aa) fasta scores: E(): 3.6e-57%2C 51.41%25 id in 282 aa;codon_start=1;old_locus_tag=BF2051;product=putative glycosyltransferase;protein_id=CAH07748.1;transl_table=11;translation=length.283
CR626927	GenBank	exon	3724	4575	.	-	1	Parent=BF9343_1967.t01
CR626927	GenBank	gene	4588	5739	.	-	1	ID=BF9343_1968;Name=BF9343_1968
CR626927	GenBank	gene_component_region	4657	5163	.	-	1	Parent=BF9343_1968;Name=BF9343_1968;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 151.0%2C E-value 1.8e-42
CR626927	GenBank	gene_component_region	4804	4836	.	-	1	Parent=BF9343_1968;Name=BF9343_1968;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
CR626927	GenBank	mRNA	4588	5739	.	-	1	ID=BF9343_1968.t01;Parent=BF9343_1968
CR626927	GenBank	CDS	4588	5739	.	-	1	ID=BF9343_1968.p01;Parent=BF9343_1968.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1968,EnsemblGenomes-Tr:CAH07749,GOA:Q5LDQ8,InterPro:IPR001296,UniProtKB/TrEMBL:Q5LDQ8;Name=BF9343_1968;Note=Similar to Yersinia enterocolitica lipopolysaccharide biosynthesis WbcM protein SWALL:Q56916 (EMBL:Z47767) (358 aa) fasta scores: E(): 4.7e-17%2C 28.53%25 id in 382 aa%2C and to Bacteroides thetaiotaomicron putative glycosyltransferase BT1180 SWALL:AAO76287 (EMBL:AE016930) (384 aa) fasta scores: E(): 4.3e-72%2C 49.6%25 id in 383 aa%2C and to Bacteroides thetaiotaomicron glycosyltransferase BT0053 SWALL:AAO75160 (EMBL:AE016926) (374 aa) fasta scores: E(): 4.6e-50%2C 38.99%25 id in 377 aa;codon_start=1;old_locus_tag=BF2052;product=putative glycosyltransferase protein;protein_id=CAH07749.1;transl_table=11;translation=length.383
CR626927	GenBank	exon	4588	5739	.	-	1	Parent=BF9343_1968.t01
CR626927	GenBank	gene	5736	6770	.	-	1	ID=BF9343_1969;Name=BF9343_1969
CR626927	GenBank	gene_component_region	5796	6299	.	-	1	Parent=BF9343_1969;Name=BF9343_1969;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 25.2%2C E-value 7.8e-07
CR626927	GenBank	mRNA	5736	6770	.	-	1	ID=BF9343_1969.t01;Parent=BF9343_1969
CR626927	GenBank	CDS	5736	6770	.	-	1	ID=BF9343_1969.p01;Parent=BF9343_1969.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1969,EnsemblGenomes-Tr:CAH07750,GOA:Q5LDQ7,InterPro:IPR001296,UniProtKB/TrEMBL:Q5LDQ7;Name=BF9343_1969;Note=C-terminus has limited similarity to C-terminus of Bacteroides thetaiotaomicron putative glycosyltransferase BT2938 SWALL:AAO78044 (EMBL:AE016938) (408 aa) fasta scores: E(): 0.0028%2C 32.6%25 id in 92 aa;codon_start=1;old_locus_tag=BF2053;product=putative glycosyltransferase;protein_id=CAH07750.1;transl_table=11;translation=length.344
CR626927	GenBank	exon	5736	6770	.	-	1	Parent=BF9343_1969.t01
CR626927	GenBank	gene	6791	7909	.	-	1	ID=BF9343_1970;Name=BF9343_1970
CR626927	GenBank	mRNA	6791	7909	.	-	1	ID=BF9343_1970.t01;Parent=BF9343_1970
CR626927	GenBank	CDS	6791	7909	.	-	1	ID=BF9343_1970.p01;Parent=BF9343_1970.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1970,EnsemblGenomes-Tr:CAH07751,UniProtKB/TrEMBL:Q5LDQ6;Name=BF9343_1970;Note=Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT1178 SWALL:AAO76285 (EMBL:AE016930) (376 aa) fasta scores: E(): 2.9e-74%2C 52.09%25 id in 382 aa;codon_start=1;old_locus_tag=BF2054;product=conserved hypothetical protein;protein_id=CAH07751.1;transl_table=11;translation=length.372
CR626927	GenBank	exon	6791	7909	.	-	1	Parent=BF9343_1970.t01
CR626927	GenBank	gene	7906	9360	.	-	1	ID=BF9343_1971;Name=BF9343_1971
CR626927	GenBank	gene_component_region	7966	8034	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8062	8121	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8158	8217	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8230	8298	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8323	8391	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8419	8487	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8794	8862	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8872	8931	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8950	9018	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	9061	9129	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	9163	9231	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	9259	9327	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=12 probable transmembrane helices predicted for BF2055 by TMHMM2.0 at aa 12-34%2C 44-66%2C 78-100%2C 115-137%2C 144-163%2C 167-189%2C 292-314%2C 324-346%2C 355-377%2C 382-401%2C 414-433 and 443-465
CR626927	GenBank	gene_component_region	8536	9339	.	-	1	Parent=BF9343_1971;Name=BF9343_1971;Note=Pfam match to entry PF01943 Polysacc_synt%2C Polysaccharide biosynthesis protein%2C score 126.0%2C E-value 5.8e-35
CR626927	GenBank	mRNA	7906	9360	.	-	1	ID=BF9343_1971.t01;Parent=BF9343_1971
CR626927	GenBank	CDS	7906	9360	.	-	1	ID=BF9343_1971.p01;Parent=BF9343_1971.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1971,EnsemblGenomes-Tr:CAH07752,GOA:Q5LDQ5,InterPro:IPR002797,InterPro:IPR029303,UniProtKB/TrEMBL:Q5LDQ5;Name=BF9343_1971;Note=Similar to Shigella boydii O-antigen flippase Wzx SWALL:Q93CS0 (EMBL:AF402314) (470 aa) fasta scores: E(): 6.6e-35%2C 33.33%25 id in 462 aa%2C and to Bacteroides thetaiotaomicron putative polysaccharide biosynthesis protein BT1177 SWALL:AAO76284 (EMBL:AE016930) (491 aa) fasta scores: E(): 6.4e-143%2C 75.88%25 id in 481 aa%2C and to Streptococcus pneumoniae putative Cps repeating unit transporter Wzx SWALL:Q8KWP3 (EMBL:AF402095) (474 aa) fasta scores: E(): 3.6e-58%2C 33.76%25 id in 459 aa;codon_start=1;old_locus_tag=BF2055;product=putative transmembrane O-antigen flippase;protein_id=CAH07752.1;transl_table=11;translation=length.484
CR626927	GenBank	exon	7906	9360	.	-	1	Parent=BF9343_1971.t01
CR626927	GenBank	gene	9442	10395	.	-	1	ID=BF9343_1972;Name=BF9343_1972
CR626927	GenBank	gene_component_region	9898	10365	.	-	1	Parent=BF9343_1972;Name=BF9343_1972;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 132.5%2C E-value 6.7e-37
CR626927	GenBank	mRNA	9442	10395	.	-	1	ID=BF9343_1972.t01;Parent=BF9343_1972
CR626927	GenBank	CDS	9442	10395	.	-	1	ID=BF9343_1972.p01;Parent=BF9343_1972.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1972,EnsemblGenomes-Tr:CAH07753,GOA:Q5LDQ4,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LDQ4;Name=BF9343_1972;Note=Similar to Streptococcus agalactiae putative capsular polysaccharide protein CpsI SWALL:Q9RPC3 (EMBL:AF163833) (322 aa) fasta scores: E(): 3.7e-19%2C 29.11%25 id in 316 aa%2C and to Bacteroides thetaiotaomicron putative glycosyltransferase BT1176 SWALL:AAO76283 (EMBL:AE016930) (286 aa) fasta scores: E(): 2.3e-52%2C 51.23%25 id in 283 aa%2C and to Clostridium perfringens capsular polysaccharide biosynthesis protein CPE0501 SWALL:Q8XN37 (EMBL:AP003187) (326 aa) fasta scores: E(): 1.5e-32%2C 40.96%25 id in 249 aa;codon_start=1;old_locus_tag=BF2056;product=putative capsular polysaccharide glycosyltransferase;protein_id=CAH07753.1;transl_table=11;translation=length.317
CR626927	GenBank	exon	9442	10395	.	-	1	Parent=BF9343_1972.t01
CR626927	GenBank	pseudogenic_exon	10476	10649	.	+	1	ID=BF9343_1973;Name=BF9343_1973;Note=Pseudogene. Similar to Bacteroides thetaiotaomicron N-acetylmuramoyl-L-alanine amidase BT1168 SWALL:Q8A8J9 (EMBL:AE016930) (147 aa) fasta scores: E(): 9.6e-09%2C 62.5%25 id in 48 aa. Note This CDS contains a stop codon at residue 50;codon_start=1;old_locus_tag=BF2057;product=putative N-acetylmuramoyl-L-alanine amidase (pseudogene);pseudo=_no_value;transl_table=11
CR626927	GenBank	pseudogene	10476	10649	.	+	1	ID=BF9343_1973.pseudogene;Alias=BF9343_1973;Name=BF9343_1973;pseudo=_no_value
CR626927	GenBank	gene	10785	12005	.	-	1	ID=BF9343_1974;Name=BF9343_1974
CR626927	GenBank	gene_component_region	11340	11864	.	-	1	Parent=BF9343_1974;Name=BF9343_1974;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 8.8%2C E-value 0.00084
CR626927	GenBank	gene_component_region	11919	11987	.	-	1	Parent=BF9343_1974;Name=BF9343_1974;Note=1 probable transmembrane helix predicted for BF2058 by TMHMM2.0 at aa 7-29
CR626927	GenBank	mRNA	10785	12005	.	-	1	ID=BF9343_1974.t01;Parent=BF9343_1974
CR626927	GenBank	CDS	10785	12005	.	-	1	ID=BF9343_1974.p01;Parent=BF9343_1974.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1974,EnsemblGenomes-Tr:CAH07755,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LDQ3;Name=BF9343_1974;Note=Similar to Salmonella enterica O-antigen WbbF protein SWALL:Q52257 (EMBL:L39794) (459 aa) fasta scores: E(): 2e-10%2C 23.36%25 id in 351 aa%2C and to Bacteroides thetaiotaomicron conserved hypothetical protein BT1167 SWALL:AAO76274 (EMBL:AE016930) (395 aa) fasta scores: E(): 2.2e-66%2C 60.96%25 id in 415 aa;codon_start=1;old_locus_tag=BF2058;product=putative capsule-related protein;protein_id=CAH07755.1;transl_table=11;translation=length.406
CR626927	GenBank	exon	10785	12005	.	-	1	Parent=BF9343_1974.t01
CR626927	GenBank	gene	12219	13109	.	-	1	ID=BF9343_1975;Name=BF9343_1975
CR626927	GenBank	gene_component_region	12558	13085	.	-	1	Parent=BF9343_1975;Name=BF9343_1975;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 90.1%2C E-value 3.9e-24
CR626927	GenBank	mRNA	12219	13109	.	-	1	ID=BF9343_1975.t01;Parent=BF9343_1975
CR626927	GenBank	CDS	12219	13109	.	-	1	ID=BF9343_1975.p01;Parent=BF9343_1975.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1975,EnsemblGenomes-Tr:CAH07756,GOA:Q5LDQ2,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LDQ2;Name=BF9343_1975;Note=Similar to Sphingomonas sp. S88 glycosyl transferase SpsQ SWALL:P74817 (EMBL:U51197) (315 aa) fasta scores: E(): 4.3e-13%2C 24.75%25 id in 307 aa%2C and to Bacteroides thetaiotaomicron putative glycosyltransferase BT1166 SWALL:AAO76273 (EMBL:AE016930) (299 aa) fasta scores: E(): 7.5e-81%2C 69.01%25 id in 284 aa%2C and to Clostridium acetobutylicum predicted glycosyltransferase CAC3069 SWALL:Q97EN9 (EMBL:AE007804) (299 aa) fasta scores: E(): 3.1e-29%2C 34.23%25 id in 260 aa;codon_start=1;old_locus_tag=BF2059;product=putative capsule-related glycosyltransferase;protein_id=CAH07756.1;transl_table=11;translation=length.296
CR626927	GenBank	exon	12219	13109	.	-	1	Parent=BF9343_1975.t01
CR626927	GenBank	gene	13152	14486	.	-	1	ID=BF9343_1976;Name=BF9343_1976
CR626927	GenBank	gene_component_region	13215	13283	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	13293	13352	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	13371	13439	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	13668	13727	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	13746	13844	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	13872	13931	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	13950	14018	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	14061	14114	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	14133	14192	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	14220	14273	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	14310	14369	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	14379	14432	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=12 probable transmembrane helices predicted for BF2060 by TMHMM2.0 at aa 19-36%2C 40-59%2C 72-89%2C 99-118%2C 125-142%2C 157-179%2C 186-205%2C 215-247%2C 254-273%2C 350-372%2C 379-398 and 402-424
CR626927	GenBank	gene_component_region	14310	14342	.	-	1	Parent=BF9343_1976;Name=BF9343_1976;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
CR626927	GenBank	mRNA	13152	14486	.	-	1	ID=BF9343_1976.t01;Parent=BF9343_1976
CR626927	GenBank	CDS	13152	14486	.	-	1	ID=BF9343_1976.p01;Parent=BF9343_1976.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1976,EnsemblGenomes-Tr:CAH07757,GOA:Q5LDQ1,UniProtKB/TrEMBL:Q5LDQ1;Name=BF9343_1976;Note=Similar to Salmonella muenchen O-antigen polymerase Rfc SWALL:RFC_SALMU (SWALL:Q00474) (399 aa) fasta scores: E(): 3.5e-05%2C 23.96%25 id in 338 aa%2C and to Bacteroides thetaiotaomicron hypothetical protein BT1165 SWALL:AAO76272 (EMBL:AE016930) (455 aa) fasta scores: E(): 1.1e-116%2C 62.2%25 id in 426 aa;codon_start=1;old_locus_tag=BF2060;product=putative transmembrane surface-related protein;protein_id=CAH07757.1;transl_table=11;translation=length.444
CR626927	GenBank	exon	13152	14486	.	-	1	Parent=BF9343_1976.t01
CR626927	GenBank	gene	14479	16695	.	-	1	ID=BF9343_1977;Name=BF9343_1977
CR626927	GenBank	gene_component_region	15196	15264	.	-	1	Parent=BF9343_1977;Name=BF9343_1977;Note=2 probable transmembrane helices predicted for BF2061 by TMHMM2.0 at aa 12-34 and 478-500
CR626927	GenBank	gene_component_region	16594	16662	.	-	1	Parent=BF9343_1977;Name=BF9343_1977;Note=2 probable transmembrane helices predicted for BF2061 by TMHMM2.0 at aa 12-34 and 478-500
CR626927	GenBank	mRNA	14479	16695	.	-	1	ID=BF9343_1977.t01;Parent=BF9343_1977
CR626927	GenBank	CDS	14479	16695	.	-	1	ID=BF9343_1977.p01;Parent=BF9343_1977.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1977,EnsemblGenomes-Tr:CAH07758,GOA:Q5LDQ0,UniProtKB/TrEMBL:Q5LDQ0;Name=BF9343_1977;Note=Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT1164 SWALL:AAO76271 (EMBL:AE016930) (742 aa) fasta scores: E(): 3.9e-156%2C 58.35%25 id in 742 aa;codon_start=1;old_locus_tag=BF2061;product=putative transmembrane protein;protein_id=CAH07758.1;transl_table=11;translation=length.738
CR626927	GenBank	exon	14479	16695	.	-	1	Parent=BF9343_1977.t01
CR626927	GenBank	gene	16706	17455	.	-	1	ID=BF9343_1978;Name=BF9343_1978
CR626927	GenBank	gene_component_region	16841	17119	.	-	1	Parent=BF9343_1978;Name=BF9343_1978;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 19.5%2C E-value 1.2e-05
CR626927	GenBank	gene_component_region	17384	17455	.	-	1	Parent=BF9343_1978;Name=BF9343_1978;Note=Signal peptide predicted for BF2062 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.545 between residues 24 and 25
CR626927	GenBank	mRNA	16706	17455	.	-	1	ID=BF9343_1978.t01;Parent=BF9343_1978
CR626927	GenBank	CDS	16706	17455	.	-	1	ID=BF9343_1978.p01;Parent=BF9343_1978.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1978,EnsemblGenomes-Tr:CAH07759,GOA:Q5LDP9,InterPro:IPR003423,UniProtKB/TrEMBL:Q5LDP9;Name=BF9343_1978;Note=Similar to Bacteroides thetaiotaomicron conserved hypothetical protein BT1163 SWALL:AAO76270 (EMBL:AE016930) (249 aa) fasta scores: E(): 1.3e-58%2C 66.53%25 id in 248 aa;codon_start=1;old_locus_tag=BF2062;product=putative outer membrane protein;protein_id=CAH07759.1;transl_table=11;translation=length.249
CR626927	GenBank	exon	16706	17455	.	-	1	Parent=BF9343_1978.t01