##gff-version 3
##sequence-region CR626927 1 12508
# conversion-by bp_genbank2gff3.pl
# organism Bacteroides fragilis NCTC 9343
# Note Bacteroides fragilis NCTC 9343, complete genome.
# date 06-FEB-2015
CR626927	GenBank	region	1	12508	.	+	1	ID=CR626927;Dbxref=BioProject:PRJNA46,taxon:272559;Name=CR626927;Note=Bacteroides fragilis NCTC 9343%2C complete genome.,Accession number for plasmid pBF9343 in this genome project: CR626928. ;comment1=Accession number for plasmid pBF9343 in this genome project: CR626928. ;culture_collection=ATCC:25285,NCTC:9343;date=06-FEB-2015;mol_type=genomic DNA;organism=Bacteroides fragilis NCTC 9343;type_material=type strain of Bacteroides fragilis
CR626927	GenBank	region	3	12508	.	+	1	ID=GenBank:region:CR626927:3:12508;Note=PS_3/PS_H lipopolysaccharide biosynthesis locus%3B label: PS_H
CR626927	GenBank	gene	1	717	.	-	1	ID=BF9343_3361;Name=BF9343_3361
CR626927	GenBank	mRNA	1	717	.	-	1	ID=BF9343_3361.t01;Parent=BF9343_3361
CR626927	GenBank	CDS	1	717	.	-	1	ID=BF9343_3361.p01;Parent=BF9343_3361.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3361,EnsemblGenomes-Tr:CAH09142,UniProtKB/TrEMBL:Q5L9T5;Name=BF9343_3361;Note=Very low similarity to Oceanobacillus iheyensis capsular polysaccharide biosynthesis OB2899 SWALL:Q8EME9 (EMBL:AP004602) (254 aa) fasta scores: E(): 0.0012%2C 22.41%25 id in 232 aa;codon_start=1;old_locus_tag=BF3451;product=putative LPS biosynthesis related conserved hypothetical protein;protein_id=CAH09142.1;transl_table=11;translation=length.238
CR626927	GenBank	exon	1	717	.	-	1	Parent=BF9343_3361.t01
CR626927	GenBank	gene	714	1256	.	-	1	ID=BF9343_3362;Name=rfbC1;locus_tag=BF9343_3362
CR626927	GenBank	gene_component_region	723	1250	.	-	1	Parent=BF9343_3362;Name=rfbC1;Note=Pfam match to entry PF00908 dTDP_sugar_isom%2C dTDP-4-dehydrorhamnose 3%2C5-epimerase%2C score 357.3%2C E-value 1.4e-104;locus_tag=BF9343_3362
CR626927	GenBank	mRNA	714	1256	.	-	1	ID=BF9343_3362.t01;Parent=BF9343_3362
CR626927	GenBank	CDS	714	1256	.	-	1	ID=BF9343_3362.p01;Parent=BF9343_3362.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3362,EnsemblGenomes-Tr:CAH09143,GOA:Q5L9T4,InterPro:IPR000888,InterPro:IPR011051,InterPro:IPR014710,UniProtKB/TrEMBL:Q5L9T4;eC_number=5.1.3.13;Name=rfbC1;Note=Similar to Shigella flexneri dTDP-4-dehydrorhamnose 3%2C5-epimerase RfbC or RmlC or SF2101 SWALL:RFBC_SHIFL (SWALL:P37780) (181 aa) fasta scores: E(): 3.3e-36%2C 56.18%25 id in 178 aa%2C and to previously sequenced Bacteroides fragilis dTDP-6-deoxy-D-glucose-3%2C5 epimerase RmlC SWALL:Q9XDK5 (EMBL:AF048749) (182 aa) fasta scores: E(): 6e-63%2C 82.77%25 id in 180 aa;codon_start=1;locus_tag=BF9343_3362;old_locus_tag=BF3452;product=putative LPS biosynthesis related dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=CAH09143.1;transl_table=11;translation=length.180
CR626927	GenBank	exon	714	1256	.	-	1	Parent=BF9343_3362.t01
CR626927	GenBank	gene	1253	2140	.	-	1	ID=BF9343_3363;Name=rffH1;locus_tag=BF9343_3363
CR626927	GenBank	gene_component_region	1412	2137	.	-	1	Parent=BF9343_3363;Name=rffH1;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C score 356.7%2C E-value 2.1e-104;locus_tag=BF9343_3363
CR626927	GenBank	mRNA	1253	2140	.	-	1	ID=BF9343_3363.t01;Parent=BF9343_3363
CR626927	GenBank	CDS	1253	2140	.	-	1	ID=BF9343_3363.p01;Parent=BF9343_3363.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3363,EnsemblGenomes-Tr:CAH09144,GOA:Q5L9T3,InterPro:IPR005835,InterPro:IPR005907,InterPro:IPR029044,UniProtKB/TrEMBL:Q5L9T3;eC_number=2.7.7.24;Name=rffH1;Note=Similar to Escherichia coli%2C and Shigella flexneri glucose-1-phosphate thymidylyltransferase RffH or B3789 or SF3863 SWALL:RFFH_ECOLI (SWALL:P27831) (293 aa) fasta scores: E(): 5.7e-74%2C 66.55%25 id in 290 aa%2C and to prveiously sequenced Bacteroides fragilis glucose-1-phosphate thymidyl transferase RmlA SWALL:Q9XDK6 (EMBL:AF048749) (295 aa) fasta scores: E(): 1.2e-101%2C 88.47%25 id in 295 aa;codon_start=1;locus_tag=BF9343_3363;old_locus_tag=BF3453;product=putative LPS biosynthesis related glucose-1-phosphate thymidylyltransferase;protein_id=CAH09144.1;transl_table=11;translation=length.295
CR626927	GenBank	exon	1253	2140	.	-	1	Parent=BF9343_3363.t01
CR626927	GenBank	gene	2165	2977	.	-	1	ID=BF9343_3364;Name=BF9343_3364
CR626927	GenBank	gene_component_region	2438	2965	.	-	1	Parent=BF9343_3364;Name=BF9343_3364;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 90.5%2C E-value 2.8e-24
CR626927	GenBank	mRNA	2165	2977	.	-	1	ID=BF9343_3364.t01;Parent=BF9343_3364
CR626927	GenBank	CDS	2165	2977	.	-	1	ID=BF9343_3364.p01;Parent=BF9343_3364.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3364,EnsemblGenomes-Tr:CAH09145,GOA:Q5L9T2,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5L9T2;Name=BF9343_3364;Note=Similar to Escherichia coli WbbD SWALL:Q03084 (EMBL:AF125322) (275 aa) fasta scores: E(): 6.8e-41%2C 42.53%25 id in 268 aa%2C and to Bacteroides thetaiotaomicron putative glycosyltransferase BT1709 SWALL:AAO76816 (EMBL:AE016932) (273 aa) fasta scores: E(): 9.4e-65%2C 58.05%25 id in 267 aa;codon_start=1;old_locus_tag=BF3454;product=putative LPS biosynthesis related glycosyltransferase;protein_id=CAH09145.1;transl_table=11;translation=length.270
CR626927	GenBank	exon	2165	2977	.	-	1	Parent=BF9343_3364.t01
CR626927	GenBank	gene	2964	4019	.	-	1	ID=BF9343_3365;Name=BF9343_3365
CR626927	GenBank	gene_component_region	3039	3530	.	-	1	Parent=BF9343_3365;Name=BF9343_3365;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 77.2%2C E-value 2.8e-20
CR626927	GenBank	mRNA	2964	4019	.	-	1	ID=BF9343_3365.t01;Parent=BF9343_3365
CR626927	GenBank	CDS	2964	4019	.	-	1	ID=BF9343_3365.p01;Parent=BF9343_3365.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3365,EnsemblGenomes-Tr:CAH09146,GOA:Q5L9T1,InterPro:IPR001296,UniProtKB/TrEMBL:Q5L9T1;Name=BF9343_3365;Note=Similar to Bacteroides thetaiotaomicron putative glycosyltransferase BT1344 SWALL:AAO76451 (EMBL:AE016931) (367 aa) fasta scores: E(): 7.5e-12%2C 28.52%25 id in 298 aa%2C and to Methanosarcina mazei glycosyltransferase MM1946 SWALL:Q8PVL7 (EMBL:AE013431) (375 aa) fasta scores: E(): 5.7e-10%2C 26.73%25 id in 303 aa. Note: No similarities found in the N-terminal region;codon_start=1;old_locus_tag=BF3455;product=putative LPS biosynthesis related glycosyltransferase;protein_id=CAH09146.1;transl_table=11;translation=length.351
CR626927	GenBank	exon	2964	4019	.	-	1	Parent=BF9343_3365.t01
CR626927	GenBank	gene	4019	5095	.	-	1	ID=BF9343_3366;Name=BF9343_3366
CR626927	GenBank	gene_component_region	4070	4129	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	4163	4222	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	4235	4294	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	4313	4381	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	4424	4492	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	4526	4594	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	4652	4720	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	4757	4825	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	4934	5002	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	gene_component_region	5021	5086	.	-	1	Parent=BF9343_3366;Name=BF9343_3366;Note=10 probable transmembrane helices predicted for BF3456 by TMHMM2.0 at aa 4-25%2C 32-54%2C 91-113%2C 126-148%2C 168-190%2C 202-224%2C 239-261%2C 268-287%2C 292-311 and 323-342
CR626927	GenBank	mRNA	4019	5095	.	-	1	ID=BF9343_3366.t01;Parent=BF9343_3366
CR626927	GenBank	CDS	4019	5095	.	-	1	ID=BF9343_3366.p01;Parent=BF9343_3366.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3366,EnsemblGenomes-Tr:CAH09147,UniProtKB/TrEMBL:Q5L9T0;Name=BF9343_3366;Note=Similar to Lactobacillus delbrueckii EpsK SWALL:Q9F0B7 (EMBL:AF267127) (353 aa) fasta scores: E(): 5.7e-14%2C 27.64%25 id in 340 aa%2C and to Clostridium perfringens capsular polysaccharide biosynthesis protein CPE0478 SWALL:Q8XN60 (EMBL:AP003186) (355 aa) fasta scores: E(): 5.3e-09%2C 24.26%25 id in 342 aa;codon_start=1;old_locus_tag=BF3456;product=putative LPS biosynthesis related polysaccharide polymerase;protein_id=CAH09147.1;transl_table=11;translation=length.358
CR626927	GenBank	exon	4019	5095	.	-	1	Parent=BF9343_3366.t01
CR626927	GenBank	gene	5050	5889	.	-	1	ID=BF9343_3367;Name=BF9343_3367
CR626927	GenBank	gene_component_region	5344	5859	.	-	1	Parent=BF9343_3367;Name=BF9343_3367;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 74.1%2C E-value 2.5e-19
CR626927	GenBank	mRNA	5050	5889	.	-	1	ID=BF9343_3367.t01;Parent=BF9343_3367
CR626927	GenBank	CDS	5050	5889	.	-	1	ID=BF9343_3367.p01;Parent=BF9343_3367.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3367,EnsemblGenomes-Tr:CAH09148,GOA:Q5L9S9,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5L9S9;Name=BF9343_3367;Note=Similar to Lactococcus lactis sugar transferase YcbI or LL0216 SWALL:Q9CIZ0 (EMBL:AE006259) (285 aa) fasta scores: E(): 3.1e-32%2C 42.97%25 id in 235 aa%2C and to Streptococcus agalactiae glycosyl transferase CpsN or SAG1166 SWALL:Q8DZD8 (EMBL:AE014245) (295 aa) fasta scores: E(): 2e-23%2C 38.86%25 id in 229 aa;codon_start=1;old_locus_tag=BF3457;product=putative LPS biosynthesis related glycosyltransferase;protein_id=CAH09148.1;transl_table=11;translation=length.279
CR626927	GenBank	exon	5050	5889	.	-	1	Parent=BF9343_3367.t01
CR626927	GenBank	gene	5859	6845	.	-	1	ID=BF9343_3368;Name=BF9343_3368
CR626927	GenBank	gene_component_region	6342	6839	.	-	1	Parent=BF9343_3368;Name=BF9343_3368;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 133.4%2C E-value 3.6e-37
CR626927	GenBank	mRNA	5859	6845	.	-	1	ID=BF9343_3368.t01;Parent=BF9343_3368
CR626927	GenBank	CDS	5859	6845	.	-	1	ID=BF9343_3368.p01;Parent=BF9343_3368.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3368,EnsemblGenomes-Tr:CAH09149,GOA:Q5L9S8,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5L9S8;Name=BF9343_3368;Note=Similar to Streptococcus thermophilus EpsH or EPS1I SWALL:Q93DZ7 (EMBL:AF373595) (316 aa) fasta scores: E(): 7e-23%2C 29.43%25 id in 316 aa%2C and to Streptococcus agalactiae CpsvJ SWALL:Q9AFH3 (EMBL:AF349539) (321 aa) fasta scores: E(): 1.7e-21%2C 32.83%25 id in 335 aa;codon_start=1;old_locus_tag=BF3458;product=putative LPS biosynthesis related glycosyltransferase;protein_id=CAH09149.1;transl_table=11;translation=length.328
CR626927	GenBank	exon	5859	6845	.	-	1	Parent=BF9343_3368.t01
CR626927	GenBank	gene	6845	7771	.	-	1	ID=BF9343_3369;Name=BF9343_3369
CR626927	GenBank	gene_component_region	6881	6949	.	-	1	Parent=BF9343_3369;Name=BF9343_3369;Note=1 probable transmembrane helix predicted for BF3459 by TMHMM2.0 at aa 275-297
CR626927	GenBank	gene_component_region	7265	7762	.	-	1	Parent=BF9343_3369;Name=BF9343_3369;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 96.0%2C E-value 6.2e-26
CR626927	GenBank	mRNA	6845	7771	.	-	1	ID=BF9343_3369.t01;Parent=BF9343_3369
CR626927	GenBank	CDS	6845	7771	.	-	1	ID=BF9343_3369.p01;Parent=BF9343_3369.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3369,EnsemblGenomes-Tr:CAH09150,GOA:Q5L9S7,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5L9S7;Name=BF9343_3369;Note=Similar to Bacteroides thetaiotaomicron glycosyltransferase BT3372 SWALL:AAO78478 (EMBL:AE016940) (326 aa) fasta scores: E(): 4.4e-21%2C 33.2%25 id in 262 aa%2C and to Clostridium acetobutylicum glycosyltransferase CAC2348 SWALL:Q97GL8 (EMBL:AE007735) (263 aa) fasta scores: E(): 3.7e-18%2C 32.8%25 id in 253 aa;codon_start=1;old_locus_tag=BF3459;product=putative LPS biosynthesis related glycosyltransferase;protein_id=CAH09150.1;transl_table=11;translation=length.308
CR626927	GenBank	exon	6845	7771	.	-	1	Parent=BF9343_3369.t01
CR626927	GenBank	gene	7800	8795	.	-	1	ID=BF9343_3370;Name=BF9343_3370
CR626927	GenBank	gene_component_region	7869	8792	.	-	1	Parent=BF9343_3370;Name=BF9343_3370;Note=Pfam match to entry PF00852 Glyco_transf_10%2C Glycosyltransferase family 10 (fucosyltransferase)%2C score -46.9%2C E-value 9.4e-09
CR626927	GenBank	gene_component_region	8076	8135	.	-	1	Parent=BF9343_3370;Name=BF9343_3370;Note=PS00448 Clostridium cellulosome enzymes repeated domain signature.
CR626927	GenBank	mRNA	7800	8795	.	-	1	ID=BF9343_3370.t01;Parent=BF9343_3370
CR626927	GenBank	CDS	7800	8795	.	-	1	ID=BF9343_3370.p01;Parent=BF9343_3370.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3370,EnsemblGenomes-Tr:CAH09151,GOA:Q5L9S6,InterPro:IPR001503,UniProtKB/TrEMBL:Q5L9S6;Name=BF9343_3370;Note=Similar to Helicobacter pylori alpha1%2C3-fucosyltransferase FucT SWALL:O30511 (EMBL:AF008596) (478 aa) fasta scores: E(): 4.1e-20%2C 36.02%25 id in 322 aa%2C and to Helicobacter pylori fucosyltransferase HP0651 SWALL:O25366 (EMBL:AE000578) (476 aa) fasta scores: E(): 5.4e-20%2C 36.77%25 id in 310 aa;codon_start=1;old_locus_tag=BF3460;product=putative LPS biosynthesis related glycosyltransferase;protein_id=CAH09151.1;transl_table=11;translation=length.331
CR626927	GenBank	exon	7800	8795	.	-	1	Parent=BF9343_3370.t01
CR626927	GenBank	gene	8803	10023	.	-	1	ID=BF9343_3371;Name=BF9343_3371
CR626927	GenBank	gene_component_region	8836	9999	.	-	1	Parent=BF9343_3371;Name=BF9343_3371;Note=Pfam match to entry PF04230 PS_pyruv_trans%2C Polysaccharide pyruvyl transferase%2C score 26.7%2C E-value 4.1e-09
CR626927	GenBank	mRNA	8803	10023	.	-	1	ID=BF9343_3371.t01;Parent=BF9343_3371
CR626927	GenBank	CDS	8803	10023	.	-	1	ID=BF9343_3371.p01;Parent=BF9343_3371.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3371,EnsemblGenomes-Tr:CAH09152,InterPro:IPR007345,UniProtKB/TrEMBL:Q5L9S5;Name=BF9343_3371;Note=Similar to Methanobacterium thermoautotrophicum conserved protein MTH340 SWALL:O26440 (EMBL:AE000819) (400 aa) fasta scores: E(): 1.1e-12%2C 25.18%25 id in 413 aa%2C and to Thermoanaerobacter tengcongensis hypothetical protein WcaK or TTE2164 SWALL:Q8R863 (EMBL:AE013163) (359 aa) fasta scores: E(): 5.1e-10%2C 25.49%25 id in 357 aa;codon_start=1;old_locus_tag=BF3461;product=conserved hypothetical protein;protein_id=CAH09152.1;transl_table=11;translation=length.406
CR626927	GenBank	exon	8803	10023	.	-	1	Parent=BF9343_3371.t01
CR626927	GenBank	gene	10024	11010	.	-	1	ID=BF9343_3372;Name=BF9343_3372
CR626927	GenBank	gene_component_region	10411	10542	.	-	1	Parent=BF9343_3372;Name=BF9343_3372;Note=Pfam match to entry PF00881 Nitroreductase%2C Nitroreductase family%2C score 31.0%2C E-value 8.1e-09
CR626927	GenBank	mRNA	10024	11010	.	-	1	ID=BF9343_3372.t01;Parent=BF9343_3372
CR626927	GenBank	CDS	10024	11010	.	-	1	ID=BF9343_3372.p01;Parent=BF9343_3372.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3372,EnsemblGenomes-Tr:CAH09153,GOA:Q5L9S4,InterPro:IPR000415,InterPro:IPR029479,UniProtKB/TrEMBL:Q5L9S4;Name=BF9343_3372;Note=No significant database matches;codon_start=1;old_locus_tag=BF3462;product=hypothetical protein;protein_id=CAH09153.1;transl_table=11;translation=length.328
CR626927	GenBank	exon	10024	11010	.	-	1	Parent=BF9343_3372.t01
CR626927	GenBank	gene	11036	12385	.	-	1	ID=BF9343_3373;Name=BF9343_3373
CR626927	GenBank	gene_component_region	11129	11197	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11210	11278	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11315	11383	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11414	11482	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11519	11587	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11660	11728	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11774	11842	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11852	11920	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11957	12016	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	12029	12097	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	12158	12226	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	12254	12322	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=12 probable transmembrane helices predicted for BF3463 by TMHMM2.0 at aa 22-44%2C 54-76%2C 97-119%2C 124-143%2C 156-178%2C 182-204%2C 220-242%2C 267-289%2C 302-324%2C 335-357%2C 370-392 and 397-419
CR626927	GenBank	gene_component_region	11516	12328	.	-	1	Parent=BF9343_3373;Name=BF9343_3373;Note=Pfam match to entry PF01943 Polysacc_synt%2C Polysaccharide biosynthesis protein%2C score 124.6%2C E-value 1.5e-34
CR626927	GenBank	mRNA	11036	12385	.	-	1	ID=BF9343_3373.t01;Parent=BF9343_3373
CR626927	GenBank	CDS	11036	12385	.	-	1	ID=BF9343_3373.p01;Parent=BF9343_3373.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3373,EnsemblGenomes-Tr:CAH09154,GOA:Q5L9S3,InterPro:IPR002797,InterPro:IPR029303,UniProtKB/TrEMBL:Q5L9S3;Name=BF9343_3373;Note=Similar to Leptospira interrogans polysaccharide biosynthesis protein RfbX or LA1649 SWALL:Q8F5M3 (EMBL:AE011343) (447 aa) fasta scores: E(): 1.4e-38%2C 30.57%25 id in 435 aa%2C and to Escherichia coli repeat unit exporter Wzx SWALL:Q9X4C7 (EMBL:AF104912) (419 aa) fasta scores: E(): 2.4e-16%2C 21.67%25 id in 429 aa;codon_start=1;old_locus_tag=BF3463;product=putative LPS biosynthesis related polysaccharide transporter;protein_id=CAH09154.1;transl_table=11;translation=length.449
CR626927	GenBank	exon	11036	12385	.	-	1	Parent=BF9343_3373.t01
CR626927	GenBank	gene	12431	12508	.	-	1	ID=BF9343_3374;Name=BF9343_3374
CR626927	GenBank	gene_component_region	12455	12508	.	-	1	Parent=BF9343_3374;Name=BF9343_3374;Note=11 probable transmembrane helices predicted for BF3464 by TMHMM2.0 at aa 5-27%2C 50-72%2C 82-104%2C 117-134%2C 140-162%2C 175-192%2C 197-219%2C 228-247%2C 262-284%2C 316-335 and 339-356
CR626927	GenBank	mRNA	12431	12508	.	-	1	ID=BF9343_3374.t01;Parent=BF9343_3374
CR626927	GenBank	CDS	12431	12508	.	-	1	ID=BF9343_3374.p01;Parent=BF9343_3374.t01;Dbxref=EnsemblGenomes-Gn:BF9343_3374,EnsemblGenomes-Tr:CAH09155,GOA:Q5L9S2,InterPro:IPR000715,InterPro:IPR018480,UniProtKB/TrEMBL:Q5L9S2;Name=BF9343_3374;Note=Similar to Escherichia coli%2C Escherichia coli O6%2C and Shigella flexneri undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA or Rfe or B3784 or C4704 or SF3858 SWALL:WECA_ECOLI (SWALL:P24235) (367 aa) fasta scores: E(): 1.7e-19%2C 27.35%25 id in 351 aa%2C and to Bacteroides thetaiotaomicron undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase BT1339 SWALL:AAO76446 (EMBL:AE016931) (368 aa) fasta scores: E(): 7e-112%2C 78.33%25 id in 360 aa;codon_start=1;old_locus_tag=BF3464;product=putative LPS biosynthesis related glycosyltransferase;protein_id=CAH09155.1;transl_table=11;translation=length.363
CR626927	GenBank	exon	12431	12508	.	-	1	Parent=BF9343_3374.t01