##gff-version 3
##sequence-region CR626927 1 21666
# conversion-by bp_genbank2gff3.pl
# organism Bacteroides fragilis NCTC 9343
# Note Bacteroides fragilis NCTC 9343, complete genome.
# date 06-FEB-2015
CR626927	GenBank	region	1	21666	.	+	1	ID=CR626927;Dbxref=BioProject:PRJNA46,taxon:272559;Name=CR626927;Note=Bacteroides fragilis NCTC 9343%2C complete genome.,Accession number for plasmid pBF9343 in this genome project: CR626928. ;comment1=Accession number for plasmid pBF9343 in this genome project: CR626928. ;culture_collection=ATCC:25285,NCTC:9343;date=06-FEB-2015;mol_type=genomic DNA;organism=Bacteroides fragilis NCTC 9343;type_material=type strain of Bacteroides fragilis
CR626927	GenBank	region	1	21663	.	+	1	ID=GenBank:region:CR626927:1:21663;Note=PS_7/PS_G region lipopolysaccharide biosynthesis locus%3B label: PS_G
CR626927	GenBank	gene	1	1209	.	+	1	ID=BF9343_0698;Name=BF9343_0698
CR626927	GenBank	mRNA	1	1209	.	+	1	ID=BF9343_0698.t01;Parent=BF9343_0698
CR626927	GenBank	CDS	1	1209	.	+	1	ID=BF9343_0698.p01;Parent=BF9343_0698.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0698,EnsemblGenomes-Tr:CAH06479,GOA:Q5LHA5,InterPro:IPR003869,InterPro:IPR016040,UniProtKB/TrEMBL:Q5LHA5;Name=BF9343_0698;Note=Similar to Streptococcus suis capsular polysaccharide protein Cps9E SWALL:Q9RG42 (EMBL:AF155805) (608 aa) fasta scores: E(): 4.7e-17%2C 28.84%25 id in 312 aa%2C and to Vibrio parahaemolyticus putative capsular polysaccharide biosynthesis protein D vp0197 SWALL:BAC58460 (EMBL:AP005073) (396 aa) fasta scores: E(): 3.2e-62%2C 44.89%25 id in 392 aa%2C and to Vibrio vulnificus predicted nucleoside-diphosphate sugar epimerases VV10811 SWALL:Q8DDZ4 (EMBL:AE016799) (396 aa) fasta scores: E(): 5.7e-62%2C 45.15%25 id in 392 aa;codon_start=1;old_locus_tag=BF0733;product=putative capsular polysaccharide biosynthesis protein;protein_id=CAH06479.1;transl_table=11;translation=length.402
CR626927	GenBank	exon	1	1209	.	+	1	Parent=BF9343_0698.t01
CR626927	GenBank	gene	1229	2362	.	+	1	ID=BF9343_0699;Name=BF9343_0699
CR626927	GenBank	gene_component_region	1256	2344	.	+	1	Parent=BF9343_0699;Name=BF9343_0699;Note=Pfam match to entry PF01041 DegT_DnrJ_EryC1%2C DegT/DnrJ/EryC1/StrS aminotransferase family%2C score 456.8%2C E-value 1.5e-134
CR626927	GenBank	gene_component_region	1466	1558	.	+	1	Parent=BF9343_0699;Name=BF9343_0699;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.
CR626927	GenBank	mRNA	1229	2362	.	+	1	ID=BF9343_0699.t01;Parent=BF9343_0699
CR626927	GenBank	CDS	1229	2362	.	+	1	ID=BF9343_0699.p01;Parent=BF9343_0699.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0699,EnsemblGenomes-Tr:CAH06480,GOA:Q5LHA4,InterPro:IPR000653,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:Q5LHA4;Name=BF9343_0699;Note=Similar to Plesiomonas shigelloides O-antigen related WbgX SWALL:Q9F743 (EMBL:AF285970) (384 aa) fasta scores: E(): 1.3e-42%2C 35.95%25 id in 381 aa%2C and to Methanococcus jannaschii hypothetical protein MJ1066 SWALL:YA66_METJA (SWALL:Q58466) (386 aa) fasta scores: E(): 5.2e-48%2C 41.01%25 id in 373 aa%2C and to Plesiomonas shigelloides ORF7P SWALL:Q9S0X9 (EMBL:AB025970) (384 aa) fasta scores: E(): 1.3e-42%2C 35.95%25 id in 381 aa;codon_start=1;old_locus_tag=BF0734;product=putative DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen related protein;protein_id=CAH06480.1;transl_table=11;translation=length.377
CR626927	GenBank	exon	1229	2362	.	+	1	Parent=BF9343_0699.t01
CR626927	GenBank	gene	2355	2963	.	+	1	ID=BF9343_0700;Name=BF9343_0700
CR626927	GenBank	gene_component_region	2649	2702	.	+	1	Parent=BF9343_0700;Name=BF9343_0700;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 8.3%2C E-value 5.8
CR626927	GenBank	gene_component_region	2703	2756	.	+	1	Parent=BF9343_0700;Name=BF9343_0700;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 6.1%2C E-value 11
CR626927	GenBank	gene_component_region	2757	2810	.	+	1	Parent=BF9343_0700;Name=BF9343_0700;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 12.4%2C E-value 0.93
CR626927	GenBank	gene_component_region	2784	2870	.	+	1	Parent=BF9343_0700;Name=BF9343_0700;Note=PS00101 Hexapeptide-repeat containing-transferases signature.
CR626927	GenBank	gene_component_region	2811	2864	.	+	1	Parent=BF9343_0700;Name=BF9343_0700;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 7.5%2C E-value 7.5
CR626927	GenBank	gene_component_region	2865	2918	.	+	1	Parent=BF9343_0700;Name=BF9343_0700;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 15.8%2C E-value 0.089
CR626927	GenBank	mRNA	2355	2963	.	+	1	ID=BF9343_0700.t01;Parent=BF9343_0700
CR626927	GenBank	CDS	2355	2963	.	+	1	ID=BF9343_0700.p01;Parent=BF9343_0700.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0700,EnsemblGenomes-Tr:CAH06481,GOA:Q5LHA3,InterPro:IPR001451,InterPro:IPR011004,InterPro:IPR018357,InterPro:IPR020019,UniProtKB/TrEMBL:Q5LHA3;Name=BF9343_0700;Note=Similar to Escherichia coli capsular polysaccharide NeuD protein SWALL:Q46674 (EMBL:U05248) (207 aa) fasta scores: E(): 3.6e-11%2C 28.29%25 id in 205 aa%2C and to Caulobacter crescentus putative acetyltransferase LpsB or CC1011 SWALL:O85353 (EMBL:AF062345) (215 aa) fasta scores: E(): 1.4e-13%2C 30%25 id in 200 aa%2C and to Bacteroides thetaiotaomicron putative hexapeptide transferase family protein BT2943 SWALL:AAO78049 (EMBL:AE016938) (552 aa) fasta scores: E(): 3.6e-13%2C 33.83%25 id in 198 aa;codon_start=1;old_locus_tag=BF0735;product=putative capsular polysaccharide related hexapeptide transferase family protein;protein_id=CAH06481.1;transl_table=11;translation=length.202
CR626927	GenBank	exon	2355	2963	.	+	1	Parent=BF9343_0700.t01
CR626927	GenBank	gene	3024	4079	.	+	1	ID=BF9343_0701;Name=BF9343_0701
CR626927	GenBank	gene_component_region	3027	3185	.	+	1	Parent=BF9343_0701;Name=BF9343_0701;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 19.2%2C E-value 0.0087
CR626927	GenBank	gene_component_region	3216	3377	.	+	1	Parent=BF9343_0701;Name=BF9343_0701;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 11.8%2C E-value 0.2
CR626927	GenBank	gene_component_region	3405	4076	.	+	1	Parent=BF9343_0701;Name=BF9343_0701;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C score 63.9%2C E-value 2.9e-16
CR626927	GenBank	mRNA	3024	4079	.	+	1	ID=BF9343_0701.t01;Parent=BF9343_0701
CR626927	GenBank	CDS	3024	4079	.	+	1	ID=BF9343_0701.p01;Parent=BF9343_0701.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0701,EnsemblGenomes-Tr:CAH06482,GOA:Q5LHA2,InterPro:IPR000644,InterPro:IPR005835,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LHA2;Name=BF9343_0701;Note=Similar to Leptospira interrogans mannose-1-phosphate guanyltransferase La1611 SWALL:Q8F5Q6 (EMBL:AE011339) (351 aa) fasta scores: E(): 1.5e-30%2C 31.44%25 id in 353 aa%2C and to Pseudomonas aeruginosa similar to nucleotidyl transferase SWALL:Q8KNA1 (EMBL:AF498403) (348 aa) fasta scores: E(): 5.7e-27%2C 27.87%25 id in 348 aa%2C and to Campylobacter jejuni putative sugar-phosphate nucleotide transferase cj1329 SWALL:Q9PMX0 (EMBL:AL139078) (341 aa) fasta scores: E(): 8.5e-27%2C 30.14%25 id in 345 aa;codon_start=1;old_locus_tag=BF0736;product=putative sugar-phosphate nucleotidyl transferase;protein_id=CAH06482.1;transl_table=11;translation=length.351
CR626927	GenBank	exon	3024	4079	.	+	1	Parent=BF9343_0701.t01
CR626927	GenBank	gene	4147	5598	.	+	1	ID=BF9343_0702;Name=BF9343_0702
CR626927	GenBank	gene_component_region	4171	4983	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=Pfam match to entry PF01943 Polysacc_synt%2C Polysaccharide biosynthesis protein%2C score 108.5%2C E-value 1.1e-29
CR626927	GenBank	gene_component_region	4207	4260	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	4288	4356	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	4393	4461	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	4489	4542	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	4579	4647	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	4657	4725	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	5029	5097	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	5125	5193	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	5230	5286	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	5296	5349	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	5407	5460	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	gene_component_region	5488	5544	.	+	1	Parent=BF9343_0702;Name=BF9343_0702;Note=12 probable transmembrane helices predicted for BF0737 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 145-167%2C 171-193%2C 295-317%2C 327-349%2C 362-380%2C 384-401%2C 421-438 and 448-466
CR626927	GenBank	mRNA	4147	5598	.	+	1	ID=BF9343_0702.t01;Parent=BF9343_0702
CR626927	GenBank	CDS	4147	5598	.	+	1	ID=BF9343_0702.p01;Parent=BF9343_0702.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0702,EnsemblGenomes-Tr:CAH06483,GOA:Q5LHA1,InterPro:IPR002797,UniProtKB/TrEMBL:Q5LHA1;Name=BF9343_0702;Note=Similar to Shigella boydii O-antigen flippase Wzx SWALL:Q93CS0 (EMBL:AF402314) (470 aa) fasta scores: E(): 2.3e-30%2C 26.53%25 id in 471 aa%2C and to Bacillus subtilis TuaB protein SWALL:O32273 (EMBL:Z99122) (483 aa) fasta scores: E(): 3.8e-33%2C 26.66%25 id in 465 aa%2C and to Escherichia coli O157:H7 probable export protein WzxC or z3210 or ECS2851 SWALL:Q8X7P3 (EMBL:AE005430) (492 aa) fasta scores: E(): 3.1e-30%2C 23.31%25 id in 459 aa;codon_start=1;old_locus_tag=BF0737;product=putative polysaccharide transporter/flippase;protein_id=CAH06483.1;transl_table=11;translation=length.483
CR626927	GenBank	exon	4147	5598	.	+	1	Parent=BF9343_0702.t01
CR626927	GenBank	gene	5595	6758	.	+	1	ID=BF9343_0703;Name=BF9343_0703
CR626927	GenBank	mRNA	5595	6758	.	+	1	ID=BF9343_0703.t01;Parent=BF9343_0703
CR626927	GenBank	CDS	5595	6758	.	+	1	ID=BF9343_0703.p01;Parent=BF9343_0703.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0703,EnsemblGenomes-Tr:CAH06484,GOA:Q5LHA0,InterPro:IPR001296,UniProtKB/TrEMBL:Q5LHA0;Name=BF9343_0703;Note=Limited similarity to Thermoanaerobacter tengcongensis predicted glycosyltransferases Rfag2 or TTE0275 SWALL:Q8RCY0 (EMBL:AE013000) (404 aa) fasta scores: E(): 0.0047%2C 21.21%25 id in 297 aa;codon_start=1;old_locus_tag=BF0738;product=possible glycosyltransferase protein;protein_id=CAH06484.1;transl_table=11;translation=length.387
CR626927	GenBank	exon	5595	6758	.	+	1	Parent=BF9343_0703.t01
CR626927	GenBank	gene	6791	7891	.	+	1	ID=BF9343_0704;Name=BF9343_0704
CR626927	GenBank	gene_component_region	6839	6907	.	+	1	Parent=BF9343_0704;Name=BF9343_0704;Note=8 probable transmembrane helices predicted for BF0739 by TMHMM2.0 at aa 17-39%2C 59-81%2C 98-117%2C 146-168%2C 181-203%2C 231-253%2C 266-288 and 310-332
CR626927	GenBank	gene_component_region	6965	7033	.	+	1	Parent=BF9343_0704;Name=BF9343_0704;Note=8 probable transmembrane helices predicted for BF0739 by TMHMM2.0 at aa 17-39%2C 59-81%2C 98-117%2C 146-168%2C 181-203%2C 231-253%2C 266-288 and 310-332
CR626927	GenBank	gene_component_region	7082	7141	.	+	1	Parent=BF9343_0704;Name=BF9343_0704;Note=8 probable transmembrane helices predicted for BF0739 by TMHMM2.0 at aa 17-39%2C 59-81%2C 98-117%2C 146-168%2C 181-203%2C 231-253%2C 266-288 and 310-332
CR626927	GenBank	gene_component_region	7226	7294	.	+	1	Parent=BF9343_0704;Name=BF9343_0704;Note=8 probable transmembrane helices predicted for BF0739 by TMHMM2.0 at aa 17-39%2C 59-81%2C 98-117%2C 146-168%2C 181-203%2C 231-253%2C 266-288 and 310-332
CR626927	GenBank	gene_component_region	7331	7399	.	+	1	Parent=BF9343_0704;Name=BF9343_0704;Note=8 probable transmembrane helices predicted for BF0739 by TMHMM2.0 at aa 17-39%2C 59-81%2C 98-117%2C 146-168%2C 181-203%2C 231-253%2C 266-288 and 310-332
CR626927	GenBank	gene_component_region	7481	7549	.	+	1	Parent=BF9343_0704;Name=BF9343_0704;Note=8 probable transmembrane helices predicted for BF0739 by TMHMM2.0 at aa 17-39%2C 59-81%2C 98-117%2C 146-168%2C 181-203%2C 231-253%2C 266-288 and 310-332
CR626927	GenBank	gene_component_region	7586	7654	.	+	1	Parent=BF9343_0704;Name=BF9343_0704;Note=8 probable transmembrane helices predicted for BF0739 by TMHMM2.0 at aa 17-39%2C 59-81%2C 98-117%2C 146-168%2C 181-203%2C 231-253%2C 266-288 and 310-332
CR626927	GenBank	gene_component_region	7718	7786	.	+	1	Parent=BF9343_0704;Name=BF9343_0704;Note=8 probable transmembrane helices predicted for BF0739 by TMHMM2.0 at aa 17-39%2C 59-81%2C 98-117%2C 146-168%2C 181-203%2C 231-253%2C 266-288 and 310-332
CR626927	GenBank	mRNA	6791	7891	.	+	1	ID=BF9343_0704.t01;Parent=BF9343_0704
CR626927	GenBank	CDS	6791	7891	.	+	1	ID=BF9343_0704.p01;Parent=BF9343_0704.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0704,EnsemblGenomes-Tr:CAH06485,GOA:Q5LH99,UniProtKB/TrEMBL:Q5LH99;Name=BF9343_0704;Note=Limited similarity to Salmonella enterica O-antigen polymerase WbaA SWALL:Q01418 (EMBL:M84642) (359 aa) fasta scores: E(): 0.00023%2C 23.58%25 id in 352 aa%2C and to Leishmania tarentolae Murf1 protein murf1 SWALL:Q33559 (EMBL:M10126) (443 aa) fasta scores: E(): 0.00032%2C 23.24%25 id in 327 aa%2C and to Phytomonas serpens Murf1 SWALL:Q9XKY5 (EMBL:AF079967) (441 aa) fasta scores: E(): 0.0012%2C 22.97%25 id in 383 aa%2C and to Lactobacillus plantarum polysaccharide polymerase Cps2H or LP_1204 SWALL:CAD63717 (EMBL:AL935255) (379 aa) fasta scores: E(): 0.0019%2C 22.5%25 id in 320 aa;codon_start=1;old_locus_tag=BF0739;product=possible O-antigen related transmembrane protein;protein_id=CAH06485.1;transl_table=11;translation=length.366
CR626927	GenBank	exon	6791	7891	.	+	1	Parent=BF9343_0704.t01
CR626927	GenBank	gene	7903	9018	.	+	1	ID=BF9343_0705;Name=BF9343_0705
CR626927	GenBank	mRNA	7903	9018	.	+	1	ID=BF9343_0705.t01;Parent=BF9343_0705
CR626927	GenBank	CDS	7903	9018	.	+	1	ID=BF9343_0705.p01;Parent=BF9343_0705.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0705,EnsemblGenomes-Tr:CAH06486,GOA:Q5LH98,UniProtKB/TrEMBL:Q5LH98;Name=BF9343_0705;Note=Limited similarity to Staphylococcus aureus Cap5I SWALL:P95702 (EMBL:U81973) (369 aa) fasta scores: E(): 0.00025%2C 24.12%25 id in 373 aa%2C and to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap5I or sav0157 or sa0152 SWALL:Q99X62 (EMBL:AP003358) (369 aa) fasta scores: E(): 0.00061%2C 23.38%25 id in 372 aa%2C and to Aquifex aeolicus mannosyltransferase c mtfc or AQ_516 SWALL:O66802 (EMBL:AE000693) (368 aa) fasta scores: E(): 0.21%2C 22.64%25 id in 340 aa%2C and to Clostridium acetobutylicum diverged glycosyltransferase domain containing protein CAC2326 SWALL:Q97GP0 (EMBL:AE007733) (436 aa) fasta scores: E(): 1.4%2C 26.81%25 id in 138 aa;codon_start=1;old_locus_tag=BF0740;product=possible glycosyltransferase;protein_id=CAH06486.1;transl_table=11;translation=length.371
CR626927	GenBank	exon	7903	9018	.	+	1	Parent=BF9343_0705.t01
CR626927	GenBank	gene	9028	10047	.	+	1	ID=BF9343_0706;Name=BF9343_0706
CR626927	GenBank	mRNA	9028	10047	.	+	1	ID=BF9343_0706.t01;Parent=BF9343_0706
CR626927	GenBank	CDS	9028	10047	.	+	1	ID=BF9343_0706.p01;Parent=BF9343_0706.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0706,EnsemblGenomes-Tr:CAH06487,GOA:Q5LH97,InterPro:IPR002509,InterPro:IPR011330,UniProtKB/TrEMBL:Q5LH97;Name=BF9343_0706;Note=no significant database matches;codon_start=1;old_locus_tag=BF0741;product=hypothetical protein;protein_id=CAH06487.1;transl_table=11;translation=length.339
CR626927	GenBank	exon	9028	10047	.	+	1	Parent=BF9343_0706.t01
CR626927	GenBank	gene	10044	11141	.	+	1	ID=BF9343_0707;Name=BF9343_0707
CR626927	GenBank	mRNA	10044	11141	.	+	1	ID=BF9343_0707.t01;Parent=BF9343_0707
CR626927	GenBank	CDS	10044	11141	.	+	1	ID=BF9343_0707.p01;Parent=BF9343_0707.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0707,EnsemblGenomes-Tr:CAH06488,UniProtKB/TrEMBL:Q5LH96;Name=BF9343_0707;Note=Limited similarity to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap8H SWALL:P72374 (EMBL:U73374) (359 aa) fasta scores: E(): 0.00027%2C 22.51%25 id in 262 aa%2C and to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap8H or mw0131 SWALL:Q8NYP6 (EMBL:AP004822) (359 aa) fasta scores: E(): 0.00015%2C 23.01%25 id in 265 aa%2C and to Streptococcus pneumoniae capsular polysaccharide biosynthesis WciK or sp0352 SWALL:Q9AHC9 (EMBL:AF316639) (358 aa) fasta scores: E(): 0.00072%2C 26.73%25 id in 318 aa;codon_start=1;old_locus_tag=BF0742;product=possible capsular polysaccharide related protein;protein_id=CAH06488.1;transl_table=11;translation=length.365
CR626927	GenBank	exon	10044	11141	.	+	1	Parent=BF9343_0707.t01
CR626927	GenBank	gene	11159	12367	.	+	1	ID=BF9343_0708;Name=BF9343_0708
CR626927	GenBank	gene_component_region	11162	11719	.	+	1	Parent=BF9343_0708;Name=BF9343_0708;Note=Pfam match to entry PF03721 UDPG_MGDP_dh_N%2C UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%2C score 244.9%2C E-value 9.3e-71
CR626927	GenBank	gene_component_region	11219	11251	.	+	1	Parent=BF9343_0708;Name=BF9343_0708;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site.
CR626927	GenBank	gene_component_region	11741	12013	.	+	1	Parent=BF9343_0708;Name=BF9343_0708;Note=Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family%2C central domain%2C score 126.9%2C E-value 3.2e-35
CR626927	GenBank	gene_component_region	12089	12364	.	+	1	Parent=BF9343_0708;Name=BF9343_0708;Note=Pfam match to entry PF03720 UDPG_MGDP_dh_C%2C UDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain%2C score 62.1%2C E-value 1.1e-15
CR626927	GenBank	mRNA	11159	12367	.	+	1	ID=BF9343_0708.t01;Parent=BF9343_0708
CR626927	GenBank	CDS	11159	12367	.	+	1	ID=BF9343_0708.p01;Parent=BF9343_0708.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0708,EnsemblGenomes-Tr:CAH06489,GOA:Q5LH95,InterPro:IPR001732,InterPro:IPR008927,InterPro:IPR014026,InterPro:IPR014027,InterPro:IPR016040,InterPro:IPR017476,InterPro:IPR028359,UniProtKB/TrEMBL:Q5LH95;Name=BF9343_0708;Note=Similar to previously sequenced Bacteroides fragilis UDP-ManNAc dehydrogenase MnaB SWALL:Q9RGJ9 (EMBL:AF125164) (408 aa) fasta scores: E(): 2.2e-136%2C 88.27%25 id in 401 aa%2C and to Bacteroides thetaiotaomicron UDP-N-acetyl-D-mannosamine dehydrogenase BT2945 SWALL:AAO78051 (EMBL:AE016938) (400 aa) fasta scores: E(): 1.8e-103%2C 66.08%25 id in 401 aa%2C and to Acinetobacter lwoffii putative NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase WeeB SWALL:Q9RMD5 (EMBL:AJ243431) (417 aa) fasta scores: E(): 3.7e-74%2C 52.67%25 id in 412 aa;codon_start=1;old_locus_tag=BF0743;product=putative UDP-ManNAc dehydrogenase;protein_id=CAH06489.1;transl_table=11;translation=length.402
CR626927	GenBank	exon	11159	12367	.	+	1	Parent=BF9343_0708.t01
CR626927	GenBank	gene	12378	13538	.	+	1	ID=BF9343_0709;Name=BF9343_0709
CR626927	GenBank	gene_component_region	12441	13526	.	+	1	Parent=BF9343_0709;Name=BF9343_0709;Note=Pfam match to entry PF02350 Epimerase_2%2C UDP-N-acetylglucosamine 2-epimerase%2C score 562.6%2C E-value 2.2e-166
CR626927	GenBank	mRNA	12378	13538	.	+	1	ID=BF9343_0709.t01;Parent=BF9343_0709
CR626927	GenBank	CDS	12378	13538	.	+	1	ID=BF9343_0709.p01;Parent=BF9343_0709.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0709,EnsemblGenomes-Tr:CAH06490,GOA:Q5LH94,InterPro:IPR003331,InterPro:IPR029767,UniProtKB/TrEMBL:Q5LH94;Name=BF9343_0709;Note=Similar to previously sequenced Bacteroides fragilis UDP-GlcNAc 2-epimerase MnaA SWALL:Q9RGJ8 (EMBL:AF125164) (384 aa) fasta scores: E(): 9.3e-120%2C 79.63%25 id in 383 aa%2C and to Bacteroides thetaiotaomicron UDP-N-acetylglucosamine 2-epimerase BT0601 SWALL:AAO75708 (EMBL:AE016928) (403 aa) fasta scores: E(): 2.7e-108%2C 76.1%25 id in 385 aa%2C and to Bacteroides thetaiotaomicron putative UDP-N-acetylglucosamine 2-epimerase BT2944 SWALL:AAO78050 (EMBL:AE016938) (376 aa) fasta scores: E(): 3.3e-89%2C 62.3%25 id in 382 aa;codon_start=1;old_locus_tag=BF0744;product=putative UDP-GlcNAc 2-epimerase;protein_id=CAH06490.1;transl_table=11;translation=length.386
CR626927	GenBank	exon	12378	13538	.	+	1	Parent=BF9343_0709.t01
CR626927	GenBank	pseudogenic_exon	13636	13836	.	+	1	ID=BF9343_0710;Name=BF9343_0710;Note=Fragment. Similar to part of the previously sequenced Bacteroides fragilis hypothetical 22.1 kDa protein SWALL:Q8VSS7 (EMBL:AF366394) (193 aa) fasta scores: E(): 2.5e-07%2C 60.37%25 id in 53 aa;codon_start=1;old_locus_tag=BF0745;product=conserved hypothetical (fragment);pseudo=_no_value;transl_table=11
CR626927	GenBank	pseudogene	13636	13836	.	+	1	ID=BF9343_0710.pseudogene;Alias=BF9343_0710;Name=BF9343_0710;pseudo=_no_value
CR626927	GenBank	gene	14141	15049	.	-	1	ID=BF9343_0711;Name=BF9343_0711
CR626927	GenBank	gene_component_region	14156	14707	.	-	1	Parent=BF9343_0711;Name=BF9343_0711;Note=Pfam match to entry PF01609 Transposase_11%2C Transposase DDE domain%2C score 4.0%2C E-value 0.0013
CR626927	GenBank	mRNA	14141	15049	.	-	1	ID=BF9343_0711.t01;Parent=BF9343_0711
CR626927	GenBank	CDS	14141	15049	.	-	1	ID=BF9343_0711.p01;Parent=BF9343_0711.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0711,EnsemblGenomes-Tr:CAH06492,InterPro:IPR025668,UniProtKB/TrEMBL:Q5LH93;Name=BF9343_0711;Note=Similar to Lactococcus lactis transposase SWALL:Q48369 (EMBL:L34754) (296 aa) fasta scores: E(): 8e-05%2C 25.6%25 id in 250 aa%2C and to Lactococcus lactis putative IS-like element protein SWALL:Q53510 (EMBL:S77101) (296 aa) fasta scores: E(): 1.6e-06%2C 26.8%25 id in 250 aa%2C and to Lactococcus lactis%2C and Lactococcus lactis subsp. lactis bv. diacetylactis putative transposase SWALL:O87349 (EMBL:AF051563) (296 aa) fasta scores: E(): 2.9e-06%2C 26.4%25 id in 250 aa;codon_start=1;old_locus_tag=BF0746;product=putative transposase_11 DDE family protein;protein_id=CAH06492.1;transl_table=11;translation=length.302
CR626927	GenBank	exon	14141	15049	.	-	1	Parent=BF9343_0711.t01
CR626927	GenBank	gene	15332	17206	.	+	1	ID=BF9343_0712;Name=BF9343_0712
CR626927	GenBank	mRNA	15332	17206	.	+	1	ID=BF9343_0712.t01;Parent=BF9343_0712
CR626927	GenBank	CDS	15332	17206	.	+	1	ID=BF9343_0712.p01;Parent=BF9343_0712.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0712,EnsemblGenomes-Tr:CAH06493,InterPro:IPR008929,InterPro:IPR012480,UniProtKB/TrEMBL:Q5LH92;Name=BF9343_0712;Note=Similar to Acinetobacter lwoffii emulsan biosynthesis WeeF protein SWALL:Q9RMC9 (EMBL:AJ243431) (604 aa) fasta scores: E(): 5.6e-43%2C 28.88%25 id in 630 aa%2C and to Pseudomonas aeruginosa ORF_12 of O-antigen biosynthetic locus SWALL:Q8KN79 (EMBL:AF498414) (614 aa) fasta scores: E(): 1e-42%2C 31.34%25 id in 469 aa%2C and to Ralstonia solanacearum hypothetical protein RSP1010 or RS02344 SWALL:Q8XR51 (EMBL:AL646082) (612 aa) fasta scores: E(): 6.1e-36%2C 28.54%25 id in 466 aa;codon_start=1;old_locus_tag=BF0747;product=conserved hypothetical protein;protein_id=CAH06493.1;transl_table=11;translation=length.624
CR626927	GenBank	exon	15332	17206	.	+	1	Parent=BF9343_0712.t01
CR626927	GenBank	gene	17208	18425	.	+	1	ID=BF9343_0713;Name=BF9343_0713
CR626927	GenBank	gene_component_region	17817	18347	.	+	1	Parent=BF9343_0713;Name=BF9343_0713;Note=Pfam match to entry PF00534 Glycos_transf_1%2C Glycosyl transferases group 1%2C score 43.7%2C E-value 3.6e-10
CR626927	GenBank	mRNA	17208	18425	.	+	1	ID=BF9343_0713.t01;Parent=BF9343_0713
CR626927	GenBank	CDS	17208	18425	.	+	1	ID=BF9343_0713.p01;Parent=BF9343_0713.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0713,EnsemblGenomes-Tr:CAH06494,GOA:Q5LH91,InterPro:IPR001296,InterPro:IPR028098,UniProtKB/TrEMBL:Q5LH91;Name=BF9343_0713;Note=Similar to Nostoc punctiforme lipopolysaccharide biosynthesis protein SWALL:Q93LM6 (EMBL:AY037293) (440 aa) fasta scores: E(): 3.3e-20%2C 26.11%25 id in 402 aa%2C and to Acinetobacter lwoffii putative glycosyltransferase WeeG SWALL:Q9RMC8 (EMBL:AJ243431) (403 aa) fasta scores: E(): 1e-85%2C 54.66%25 id in 397 aa%2C and to Pseudomonas aeruginosa similar to glycosyl transferases group 1 SWALL:Q8KH36 (EMBL:AF498407) (405 aa) fasta scores: E(): 1.6e-81%2C 54.2%25 id in 404 aa;codon_start=1;old_locus_tag=BF0748;product=putative glycosyltransferase protein;protein_id=CAH06494.1;transl_table=11;translation=length.405
CR626927	GenBank	exon	17208	18425	.	+	1	Parent=BF9343_0713.t01
CR626927	GenBank	gene	18444	19052	.	+	1	ID=BF9343_0714;Name=BF9343_0714
CR626927	GenBank	gene_component_region	18462	19007	.	+	1	Parent=BF9343_0714;Name=BF9343_0714;Note=Pfam match to entry PF02397 Bact_transf%2C Bacterial sugar transferase%2C score 150.0%2C E-value 3.6e-42
CR626927	GenBank	gene_component_region	18477	18545	.	+	1	Parent=BF9343_0714;Name=BF9343_0714;Note=1 probable transmembrane helix predicted for BF0749 by TMHMM2.0 at aa 12-34
CR626927	GenBank	mRNA	18444	19052	.	+	1	ID=BF9343_0714.t01;Parent=BF9343_0714
CR626927	GenBank	CDS	18444	19052	.	+	1	ID=BF9343_0714.p01;Parent=BF9343_0714.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0714,EnsemblGenomes-Tr:CAH06495,GOA:Q5LH90,InterPro:IPR003362,UniProtKB/TrEMBL:Q5LH90;Name=BF9343_0714;Note=Similar to Campylobacter jejuni UDP-galactose phosphate transferase homolog SWALL:Q9S5Y5 (EMBL:AF001498) (200 aa) fasta scores: E(): 4.6e-46%2C 60.89%25 id in 202 aa%2C and to Bacteroides fragilis putative undecaprenyl-phosphate glycosyl-1-phosphate transferase WcgN SWALL:Q9RGI8 (EMBL:AF125164) (202 aa) fasta scores: E(): 1.7e-70%2C 82.67%25 id in 202 aa%2C and to Oceanobacillus iheyensis UDP-galactose phosphate transferase ob2892 SWALL:Q8EMF5 (EMBL:AP004602) (215 aa) fasta scores: E(): 3.5e-47%2C 57.71%25 id in 201 aa;codon_start=1;old_locus_tag=BF0749;product=putative UDP-galactose phosphate transferase;protein_id=CAH06495.1;transl_table=11;translation=length.202
CR626927	GenBank	exon	18444	19052	.	+	1	Parent=BF9343_0714.t01
CR626927	GenBank	gene	19057	19641	.	+	1	ID=BF9343_0715;Name=BF9343_0715
CR626927	GenBank	gene_component_region	19366	19419	.	+	1	Parent=BF9343_0715;Name=BF9343_0715;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 8.1%2C E-value 6.2
CR626927	GenBank	gene_component_region	19420	19473	.	+	1	Parent=BF9343_0715;Name=BF9343_0715;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 9.9%2C E-value 3.7
CR626927	GenBank	gene_component_region	19474	19527	.	+	1	Parent=BF9343_0715;Name=BF9343_0715;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 10.5%2C E-value 3.1
CR626927	GenBank	gene_component_region	19501	19587	.	+	1	Parent=BF9343_0715;Name=BF9343_0715;Note=PS00101 Hexapeptide-repeat containing-transferases signature.
CR626927	GenBank	gene_component_region	19528	19581	.	+	1	Parent=BF9343_0715;Name=BF9343_0715;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (three repeats)%2C score 12.9%2C E-value 0.66
CR626927	GenBank	mRNA	19057	19641	.	+	1	ID=BF9343_0715.t01;Parent=BF9343_0715
CR626927	GenBank	CDS	19057	19641	.	+	1	ID=BF9343_0715.p01;Parent=BF9343_0715.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0715,EnsemblGenomes-Tr:CAH06496,GOA:Q5LH89,InterPro:IPR001451,InterPro:IPR011004,InterPro:IPR016185,InterPro:IPR018357,InterPro:IPR020019,UniProtKB/TrEMBL:Q5LH89;Name=BF9343_0715;Note=Similar to Legionella pneumophila putative acetyl transferase SWALL:Q9RDX7 (EMBL:AJ007311) (419 aa) fasta scores: E(): 4.5e-16%2C 39.17%25 id in 194 aa%2C and to previously sequenced Bacteroides fragilis putative acetyltransferase WcgO SWALL:Q9RGI7 (EMBL:AF125164) (194 aa) fasta scores: E(): 4.7e-70%2C 96.9%25 id in 194 aa%2C and to Bacillus subtilis hypothetical protein YvfD SWALL:P71063 (EMBL:Z71928) (216 aa) fasta scores: E(): 7.7e-24%2C 43.41%25 id in 205 aa;codon_start=1;old_locus_tag=BF0750;product=putative acetyltransferase;protein_id=CAH06496.1;transl_table=11;translation=length.194
CR626927	GenBank	exon	19057	19641	.	+	1	Parent=BF9343_0715.t01
CR626927	GenBank	gene	19834	20445	.	-	1	ID=BF9343_0716;Name=BF9343_0716
CR626927	GenBank	gene_component_region	19885	20280	.	-	1	Parent=BF9343_0716;Name=BF9343_0716;Note=Pfam match to entry PF02661 Fic%2C Fic protein family%2C score 103.9%2C E-value 2.7e-28
CR626927	GenBank	mRNA	19834	20445	.	-	1	ID=BF9343_0716.t01;Parent=BF9343_0716
CR626927	GenBank	CDS	19834	20445	.	-	1	ID=BF9343_0716.p01;Parent=BF9343_0716.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0716,EnsemblGenomes-Tr:CAH06497,InterPro:IPR003812,UniProtKB/TrEMBL:Q5LH88;Name=BF9343_0716;Note=Similar to Haemophilus aegyptius hypothetical protein bpl02 SWALL:Q8VRE7 (EMBL:AF447808) (311 aa) fasta scores: E(): 1.2e-08%2C 30%25 id in 200 aa%2C and to Xylella fastidiosa cell filamentation protein xf1657 SWALL:Q9PCU8 (EMBL:AE003992) (203 aa) fasta scores: E(): 7.5e-08%2C 29.16%25 id in 192 aa%2C and to Shewanella oneidensis cell filamentation protein fic fic or so0913 SWALL:Q8EID0 (EMBL:AE015536) (197 aa) fasta scores: E(): 1.3e-07%2C 30.43%25 id in 161 aa;codon_start=1;old_locus_tag=BF0751;product=putative FIC family protein;protein_id=CAH06497.1;transl_table=11;translation=length.203
CR626927	GenBank	exon	19834	20445	.	-	1	Parent=BF9343_0716.t01
CR626927	GenBank	gene	20533	21666	.	+	1	ID=BF9343_0717;Name=BF9343_0717
CR626927	GenBank	gene_component_region	20560	21654	.	+	1	Parent=BF9343_0717;Name=BF9343_0717;Note=Pfam match to entry PF01041 DegT_DnrJ_EryC1%2C DegT/DnrJ/EryC1/StrS aminotransferase family%2C score 382.3%2C E-value 4.2e-112
CR626927	GenBank	mRNA	20533	21666	.	+	1	ID=BF9343_0717.t01;Parent=BF9343_0717
CR626927	GenBank	CDS	20533	21666	.	+	1	ID=BF9343_0717.p01;Parent=BF9343_0717.t01;Dbxref=EnsemblGenomes-Gn:BF9343_0717,EnsemblGenomes-Tr:CAH06498,GOA:Q5LH87,InterPro:IPR000653,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:Q5LH87;Name=BF9343_0717;Note=Similar to Campylobacter jejuni lipopolysaccharide biosynthesis WlaK protein SWALL:O86158 (EMBL:Y11648) (386 aa) fasta scores: E(): 2.3e-44%2C 43.76%25 id in 393 aa%2C and to Bacteroides fragilis putative aminotransferase WcgP SWALL:Q9RGI6 (EMBL:AF125164) (376 aa) fasta scores: E(): 6e-143%2C 93.06%25 id in 375 aa%2C and to Oceanobacillus iheyensis aminotransferase ob2893 SWALL:Q8EMF4 (EMBL:AP004602) (371 aa) fasta scores: E(): 8.4e-69%2C 49.73%25 id in 380 aa;codon_start=1;old_locus_tag=BF0752;product=putative DegT/DnrJ/EryC1/StrS family aminotransferase protein;protein_id=CAH06498.1;transl_table=11;translation=length.377
CR626927	GenBank	exon	20533	21666	.	+	1	Parent=BF9343_0717.t01