##gff-version 3
##sequence-region CR626927 1 14091
# conversion-by bp_genbank2gff3.pl
# organism Bacteroides fragilis NCTC 9343
# Note Bacteroides fragilis NCTC 9343, complete genome.
# date 06-FEB-2015
CR626927	GenBank	region	1	14091	.	+	1	ID=CR626927;Dbxref=BioProject:PRJNA46,taxon:272559;Name=CR626927;Note=Bacteroides fragilis NCTC 9343%2C complete genome.,Accession number for plasmid pBF9343 in this genome project: CR626928. ;comment1=Accession number for plasmid pBF9343 in this genome project: CR626928. ;culture_collection=ATCC:25285,NCTC:9343;date=06-FEB-2015;mol_type=genomic DNA;organism=Bacteroides fragilis NCTC 9343;type_material=type strain of Bacteroides fragilis
CR626927	GenBank	region	1	14088	.	+	1	ID=GenBank:region:CR626927:1:14088;Note=PS_6/PS_F lipopolysaccharide biosynthesis locus%3B label: PS_F
CR626927	GenBank	gene	1	891	.	+	1	ID=BF9343_1475;Name=rmlA1;locus_tag=BF9343_1475
CR626927	GenBank	gene_component_region	4	729	.	+	1	Parent=BF9343_1475;Name=rmlA1;Note=Pfam match to entry PF00483 NTP_transferase%2C Nucleotidyl transferase%2C score 367.7%2C E-value 1e-107;locus_tag=BF9343_1475
CR626927	GenBank	mRNA	1	891	.	+	1	ID=BF9343_1475.t01;Parent=BF9343_1475
CR626927	GenBank	CDS	1	891	.	+	1	ID=BF9343_1475.p01;Parent=BF9343_1475.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1475,EnsemblGenomes-Tr:CAH07256,GOA:Q5LF42,InterPro:IPR005835,InterPro:IPR005907,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LF42;Name=rmlA1;Note=Similar to previously sequenced Bacteroides fragilis glucose-1-phosphate thymidyl transferase RmlA SWALL:Q9XDK6 (EMBL:AF048749) (295 aa) fasta scores: E(): 3.4e-106%2C 91.78%25 id in 292 aa%2C and to Bacteroides thetaiotaomicron glucose-1-phosphate thymidylyltransferase BT0463 SWALL:AAO75570 (EMBL:AE016927) (295 aa) fasta scores: E(): 2.5e-106%2C 91.09%25 id in 292 aa%2C and to previously sequenced Bacteroides fragilis glucose-1-phosphate thymidyltransferase RmlA SWALL:Q9RGK4 (EMBL:AF125164) (294 aa) fasta scores: E(): 6e-104%2C 89.38%25 id in 292 aa;codon_start=1;locus_tag=BF9343_1475;old_locus_tag=BF1551;product=putative glucose-1-phosphate thymidyl transferase;protein_id=CAH07256.1;transl_table=11;translation=length.296
CR626927	GenBank	exon	1	891	.	+	1	Parent=BF9343_1475.t01
CR626927	GenBank	gene	891	1466	.	+	1	ID=BF9343_1476;Name=rmlC2;locus_tag=BF9343_1476
CR626927	GenBank	gene_component_region	924	1424	.	+	1	Parent=BF9343_1476;Name=rmlC2;Note=Pfam match to entry PF00908 dTDP_sugar_isom%2C dTDP-4-dehydrorhamnose 3%2C5-epimerase%2C score 319.4%2C E-value 3.5e-93;locus_tag=BF9343_1476
CR626927	GenBank	mRNA	891	1466	.	+	1	ID=BF9343_1476.t01;Parent=BF9343_1476
CR626927	GenBank	CDS	891	1466	.	+	1	ID=BF9343_1476.p01;Parent=BF9343_1476.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1476,EnsemblGenomes-Tr:CAH07257,GOA:Q5LF41,InterPro:IPR000888,InterPro:IPR011051,InterPro:IPR014710,UniProtKB/TrEMBL:Q5LF41;Name=rmlC2;Note=Similar to Bacteroides fragilis dTDP-6-deoxy-D-glucose-3%2C5 epimerase RmlC SWALL:Q9XDK5 (EMBL:AF048749) (182 aa) fasta scores: E(): 7.3e-62%2C 83.52%25 id in 176 aa%2C and to Bacteroides thetaiotaomicron dTDP-4-dehydrorhamnose 3%2C5-epimerase BT0464 SWALL:AAO75571 (EMBL:AE016927) (189 aa) fasta scores: E(): 8.6e-63%2C 78.8%25 id in 184 aa%2C and to Bacteroides thetaiotaomicron dTDP-4-dehydrorhamnose 3%2C5-epimerase BT1338 SWALL:AAO76445 (EMBL:AE016931) (182 aa) fasta scores: E(): 1.2e-61%2C 80.22%25 id in 182 aa;codon_start=1;locus_tag=BF9343_1476;old_locus_tag=BF1552;product=putative dTDP-4-dehydrorhamnose 3%2C5 epimerase;protein_id=CAH07257.1;transl_table=11;translation=length.191
CR626927	GenBank	exon	891	1466	.	+	1	Parent=BF9343_1476.t01
CR626927	GenBank	gene	1475	1876	.	+	1	ID=BF9343_1477;Name=BF9343_1477
CR626927	GenBank	mRNA	1475	1876	.	+	1	ID=BF9343_1477.t01;Parent=BF9343_1477
CR626927	GenBank	CDS	1475	1876	.	+	1	ID=BF9343_1477.p01;Parent=BF9343_1477.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1477,EnsemblGenomes-Tr:CAH07258,UniProtKB/TrEMBL:Q5LF40;Name=BF9343_1477;Note=no significant database matches;codon_start=1;old_locus_tag=BF1553;product=hypothetical protein;protein_id=CAH07258.1;transl_table=11;translation=length.133
CR626927	GenBank	exon	1475	1876	.	+	1	Parent=BF9343_1477.t01
CR626927	GenBank	gene	1896	3212	.	+	1	ID=BF9343_1478;Name=BF9343_1478
CR626927	GenBank	gene_component_region	1896	2474	.	+	1	Parent=BF9343_1478;Name=BF9343_1478;Note=Pfam match to entry PF03721 UDPG_MGDP_dh_N%2C UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%2C score 309.1%2C E-value 4.4e-90
CR626927	GenBank	gene_component_region	2502	2789	.	+	1	Parent=BF9343_1478;Name=BF9343_1478;Note=Pfam match to entry PF00984 UDPG_MGDP_dh%2C UDP-glucose/GDP-mannose dehydrogenase family%2C central domain%2C score 170.7%2C E-value 2e-48
CR626927	GenBank	gene_component_region	2853	3161	.	+	1	Parent=BF9343_1478;Name=BF9343_1478;Note=Pfam match to entry PF03720 UDPG_MGDP_dh_C%2C UDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain%2C score 117.5%2C E-value 2.1e-32
CR626927	GenBank	mRNA	1896	3212	.	+	1	ID=BF9343_1478.t01;Parent=BF9343_1478
CR626927	GenBank	CDS	1896	3212	.	+	1	ID=BF9343_1478.p01;Parent=BF9343_1478.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1478,EnsemblGenomes-Tr:CAH07259,GOA:Q5LF39,InterPro:IPR001732,InterPro:IPR008927,InterPro:IPR014026,InterPro:IPR014027,InterPro:IPR016040,InterPro:IPR017476,InterPro:IPR028357,UniProtKB/TrEMBL:Q5LF39;Name=BF9343_1478;Note=Similar to previously sequenced Bacteroides fragilis putative UDP-glucose dehydrogenase WcfY SWALL:Q9F758 (EMBL:AF285774) (440 aa) fasta scores: E(): 3.9e-115%2C 67.89%25 id in 436 aa%2C and to Bacteroides thetaiotaomicron UDP-glucose 6-dehydrogenase BT0829 SWALL:AAO75936 (EMBL:AE016929) (437 aa) fasta scores: E(): 1e-115%2C 68.42%25 id in 437 aa%2C and to Bacteroides thetaiotaomicron UDP-glucose 6-dehydrogenase BT1341 SWALL:AAO76448 (EMBL:AE016931) (437 aa) fasta scores: E(): 1.3e-113%2C 68.65%25 id in 437 aa;codon_start=1;old_locus_tag=BF1554;product=putative nucleotide-sugar dehydrogenase;protein_id=CAH07259.1;transl_table=11;translation=length.438
CR626927	GenBank	exon	1896	3212	.	+	1	Parent=BF9343_1478.t01
CR626927	GenBank	gene	3219	4163	.	+	1	ID=BF9343_1479;Name=BF9343_1479
CR626927	GenBank	gene_component_region	3231	4154	.	+	1	Parent=BF9343_1479;Name=BF9343_1479;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 120.3%2C E-value 3.1e-33
CR626927	GenBank	mRNA	3219	4163	.	+	1	ID=BF9343_1479.t01;Parent=BF9343_1479
CR626927	GenBank	CDS	3219	4163	.	+	1	ID=BF9343_1479.p01;Parent=BF9343_1479.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1479,EnsemblGenomes-Tr:CAH07260,GOA:Q5LF38,InterPro:IPR001509,InterPro:IPR016040,UniProtKB/TrEMBL:Q5LF38;Name=BF9343_1479;Note=Similar to Pseudomonas aeruginosa protein similar to NAD dependent epimerase/dehydratase family SWALL:Q8KH68 (EMBL:AF498418) (318 aa) fasta scores: E(): 2.6e-88%2C 70.6%25 id in 313 aa%2C and to Bacteroides thetaiotaomicron putative UDP-glucose 4-epimerase BT1059 SWALL:AAO76166 (EMBL:AE016930) (309 aa) fasta scores: E(): 1.5e-93%2C 76.94%25 id in 308 aa%2C and to Xylella fastidiosa dTDP-glucose 4-6-dehydratase RfbB or PD1543 SWALL:AAO29385 (EMBL:AE012558) (329 aa) fasta scores: E(): 8.5e-86%2C 69.25%25 id in 309 aa;codon_start=1;old_locus_tag=BF1555;product=putative dNTP-hexose dehydratase-epimerase;protein_id=CAH07260.1;transl_table=11;translation=length.314
CR626927	GenBank	exon	3219	4163	.	+	1	Parent=BF9343_1479.t01
CR626927	GenBank	gene	4156	5595	.	+	1	ID=BF9343_1480;Name=BF9343_1480
CR626927	GenBank	gene_component_region	4180	4983	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=Pfam match to entry PF01943 Polysacc_synt%2C Polysaccharide biosynthesis protein%2C score 121.2%2C E-value 1.7e-33
CR626927	GenBank	gene_component_region	4216	4269	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	4297	4365	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	4402	4470	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	4498	4551	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	4612	4680	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	4777	4845	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	5035	5103	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	5131	5187	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	5248	5316	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	5326	5385	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	5398	5466	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	gene_component_region	5479	5547	.	+	1	Parent=BF9343_1480;Name=BF9343_1480;Note=12 probable transmembrane helices predicted for BF1556 by TMHMM2.0 at aa 21-38%2C 48-70%2C 83-105%2C 115-132%2C 153-175%2C 208-230%2C 294-316%2C 326-344%2C 365-387%2C 391-410%2C 415-437 and 442-464
CR626927	GenBank	mRNA	4156	5595	.	+	1	ID=BF9343_1480.t01;Parent=BF9343_1480
CR626927	GenBank	CDS	4156	5595	.	+	1	ID=BF9343_1480.p01;Parent=BF9343_1480.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1480,EnsemblGenomes-Tr:CAH07261,GOA:Q5LF37,InterPro:IPR002797,InterPro:IPR029303,UniProtKB/TrEMBL:Q5LF37;Name=BF9343_1480;Note=Similar to Escherichia coli O-antigen repeat unit transporter Wzx SWALL:Q9RP63 (EMBL:AF172324) (473 aa) fasta scores: E(): 8.7e-68%2C 39.74%25 id in 468 aa%2C and to Bacteroides thetaiotaomicron lipopolysaccharide biosynthesis protein BT1652 SWALL:AAO76759 (EMBL:AE016932) (480 aa) fasta scores: E(): 3.8e-104%2C 52.1%25 id in 476 aa%2C and to Bacteroides thetaiotaomicron putative lipopolysaccharide biosynthesis protein BT1717 SWALL:AAO76824 (EMBL:AE016933) (494 aa) fasta scores: E(): 1.3e-89%2C 47.68%25 id in 476 aa;codon_start=1;old_locus_tag=BF1556;product=putative polysaccharide transporter/flippase;protein_id=CAH07261.1;transl_table=11;translation=length.479
CR626927	GenBank	exon	4156	5595	.	+	1	Parent=BF9343_1480.t01
CR626927	GenBank	gene	5790	6716	.	+	1	ID=BF9343_1481;Name=BF9343_1481
CR626927	GenBank	gene_component_region	5790	6557	.	+	1	Parent=BF9343_1481;Name=BF9343_1481;Note=Pfam match to entry PF01501 Glyco_transf_8%2C Glycosyl transferase family 8%2C score 192.9%2C E-value 4.4e-55
CR626927	GenBank	mRNA	5790	6716	.	+	1	ID=BF9343_1481.t01;Parent=BF9343_1481
CR626927	GenBank	CDS	5790	6716	.	+	1	ID=BF9343_1481.p01;Parent=BF9343_1481.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1481,EnsemblGenomes-Tr:CAH07262,GOA:Q5LF36,InterPro:IPR002495,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LF36;Name=BF9343_1481;Note=Similar to Escherichia coli UDP-glucose:(glucosyl) LPS alpha1%2C3-glucosyltransferase WaaO SWALL:Q9R9D1 (EMBL:AF019747) (338 aa) fasta scores: E(): 2e-19%2C 27.9%25 id in 301 aa%2C and to Bacillus subtilis general stress protein A GspA or Ipa-12D SWALL:GSPA_BACSU (SWALL:P25148) (286 aa) fasta scores: E(): 6.2e-24%2C 29.74%25 id in 279 aa%2C and to Enterococcus faecalis general stress protein A GspA-2 or EF1811 SWALL:AAO81579 (EMBL:AE016952) (281 aa) fasta scores: E(): 2.9e-21%2C 29.36%25 id in 269 aa;codon_start=1;old_locus_tag=BF1557;product=putative glucosyltransferase;protein_id=CAH07262.1;transl_table=11;translation=length.308
CR626927	GenBank	exon	5790	6716	.	+	1	Parent=BF9343_1481.t01
CR626927	GenBank	gene	6713	7627	.	+	1	ID=BF9343_1482;Name=BF9343_1482
CR626927	GenBank	mRNA	6713	7627	.	+	1	ID=BF9343_1482.t01;Parent=BF9343_1482
CR626927	GenBank	CDS	6713	7627	.	+	1	ID=BF9343_1482.p01;Parent=BF9343_1482.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1482,EnsemblGenomes-Tr:CAH07263,GOA:Q5LF35,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LF35;Name=BF9343_1482;Note=Similar to Prevotella intermedia hemolysin hemolytic protein SWALL:O68620 (EMBL:AF052516) (308 aa) fasta scores: E(): 3.4e-39%2C 41.63%25 id in 269 aa%2C and to Mycobacterium avium hemolytic protein HlpA SWALL:Q8GE91 (EMBL:AY130970) (324 aa) fasta scores: E(): 4.4e-45%2C 41.19%25 id in 301 aa%2C and to Anabaena sp. HlpA protein or ALL4429 SWALL:Q8YNY0 (EMBL:AP003596) (308 aa) fasta scores: E(): 6.7e-44%2C 40.29%25 id in 273 aa;codon_start=1;old_locus_tag=BF1558;product=putative glyocosyltransferase protein;protein_id=CAH07263.1;transl_table=11;translation=length.304
CR626927	GenBank	exon	6713	7627	.	+	1	Parent=BF9343_1482.t01
CR626927	GenBank	gene	7627	8580	.	+	1	ID=BF9343_1483;Name=BF9343_1483
CR626927	GenBank	mRNA	7627	8580	.	+	1	ID=BF9343_1483.t01;Parent=BF9343_1483
CR626927	GenBank	CDS	7627	8580	.	+	1	ID=BF9343_1483.p01;Parent=BF9343_1483.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1483,EnsemblGenomes-Tr:CAH07264,UniProtKB/TrEMBL:Q5LF34;Name=BF9343_1483;Note=no significant database matches;codon_start=1;old_locus_tag=BF1559;product=hypothetical protein;protein_id=CAH07264.1;transl_table=11;translation=length.317
CR626927	GenBank	exon	7627	8580	.	+	1	Parent=BF9343_1483.t01
CR626927	GenBank	gene	8594	9391	.	+	1	ID=BF9343_1484;Name=BF9343_1484
CR626927	GenBank	gene_component_region	8618	9076	.	+	1	Parent=BF9343_1484;Name=BF9343_1484;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 105.0%2C E-value 1.3e-28
CR626927	GenBank	mRNA	8594	9391	.	+	1	ID=BF9343_1484.t01;Parent=BF9343_1484
CR626927	GenBank	CDS	8594	9391	.	+	1	ID=BF9343_1484.p01;Parent=BF9343_1484.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1484,EnsemblGenomes-Tr:CAH07265,GOA:Q5LF33,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LF33;Name=BF9343_1484;Note=Similar to Leptospira interrogans hypothetical 31.4 kDa protein SWALL:Q8VTX0 (EMBL:AF316559) (265 aa) fasta scores: E(): 3.5e-21%2C 36.94%25 id in 203 aa%2C and to Leptospira interrogans hypothetical 31.4 kDa protein SWALL:Q9AEE4 (EMBL:U61226) (265 aa) fasta scores: E(): 4e-21%2C 36.45%25 id in 203 aa%2C and to Leptospira interrogans hypothetical 31.4 kDa protein SWALL:Q8VTX7 (EMBL:AF316500) (265 aa) fasta scores: E(): 4e-21%2C 36.45%25 id in 203 aa;codon_start=1;old_locus_tag=BF1560;product=putative glycosyltransferase;protein_id=CAH07265.1;transl_table=11;translation=length.265
CR626927	GenBank	exon	8594	9391	.	+	1	Parent=BF9343_1484.t01
CR626927	GenBank	gene	9391	10527	.	+	1	ID=BF9343_1485;Name=BF9343_1485
CR626927	GenBank	gene_component_region	9409	9468	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	9496	9555	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	9616	9672	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	9715	9783	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	9820	9888	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	9931	9990	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	10126	10194	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	10288	10356	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	10417	10485	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=9 probable transmembrane helices predicted for BF1561 by TMHMM2.0 at aa 7-26%2C 36-55%2C 76-94%2C 109-131%2C 144-166%2C 181-200%2C 246-268%2C 300-322 and 343-365
CR626927	GenBank	gene_component_region	10303	10335	.	+	1	Parent=BF9343_1485;Name=BF9343_1485;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
CR626927	GenBank	mRNA	9391	10527	.	+	1	ID=BF9343_1485.t01;Parent=BF9343_1485
CR626927	GenBank	CDS	9391	10527	.	+	1	ID=BF9343_1485.p01;Parent=BF9343_1485.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1485,EnsemblGenomes-Tr:CAH07266,GOA:Q5LF32,UniProtKB/TrEMBL:Q5LF32;Name=BF9343_1485;Note=Similar to Ralstonia solanacearum probable transmembrane protein RSC1300 or RS02876 SWALL:Q8XZU5 (EMBL:AL646063) (412 aa) fasta scores: E(): 4.2e-14%2C 23.54%25 id in 310 aa;codon_start=1;old_locus_tag=BF1561;product=putative transmembrane protein;protein_id=CAH07266.1;transl_table=11;translation=length.378
CR626927	GenBank	exon	9391	10527	.	+	1	Parent=BF9343_1485.t01
CR626927	GenBank	gene	10535	11314	.	+	1	ID=BF9343_1486;Name=BF9343_1486
CR626927	GenBank	gene_component_region	10556	11056	.	+	1	Parent=BF9343_1486;Name=BF9343_1486;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 132.7%2C E-value 5.7e-37
CR626927	GenBank	gene_component_region	11228	11287	.	+	1	Parent=BF9343_1486;Name=BF9343_1486;Note=1 probable transmembrane helix predicted for BF1562 by TMHMM2.0 at aa 232-251
CR626927	GenBank	mRNA	10535	11314	.	+	1	ID=BF9343_1486.t01;Parent=BF9343_1486
CR626927	GenBank	CDS	10535	11314	.	+	1	ID=BF9343_1486.p01;Parent=BF9343_1486.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1486,EnsemblGenomes-Tr:CAH07267,GOA:Q5LF31,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LF31;Name=BF9343_1486;Note=Similar to Shigella dysenteriae O-antigen related RfpA SWALL:Q53451 (EMBL:S73325) (269 aa) fasta scores: E(): 2e-19%2C 35.29%25 id in 255 aa%2C and to Corynebacterium efficiens conserved hypothetical protein ce0379 SWALL:Q8FSL1 (EMBL:AP005215) (336 aa) fasta scores: E(): 1.1e-24%2C 41.37%25 id in 232 aa%2C and to Escherichia coli putative glycosyltransferase WbgP SWALL:Q8VQ42 (EMBL:AF461121) (251 aa) fasta scores: E(): 1.2e-20%2C 33.75%25 id in 237 aa;codon_start=1;old_locus_tag=BF1562;product=putative glycosyltransferase O-antigen related protein;protein_id=CAH07267.1;transl_table=11;translation=length.259
CR626927	GenBank	exon	10535	11314	.	+	1	Parent=BF9343_1486.t01
CR626927	GenBank	gene	11302	12120	.	+	1	ID=BF9343_1487;Name=BF9343_1487
CR626927	GenBank	gene_component_region	11317	11865	.	+	1	Parent=BF9343_1487;Name=BF9343_1487;Note=Pfam match to entry PF00535 Glycos_transf_2%2C Glycosyl transferase%2C score 44.2%2C E-value 2.6e-10
CR626927	GenBank	mRNA	11302	12120	.	+	1	ID=BF9343_1487.t01;Parent=BF9343_1487
CR626927	GenBank	CDS	11302	12120	.	+	1	ID=BF9343_1487.p01;Parent=BF9343_1487.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1487,EnsemblGenomes-Tr:CAH07268,GOA:Q5LF30,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:Q5LF30;Name=BF9343_1487;Note=Similar to Acinetobacter calcoaceticus EpsX protein SWALL:Q43940 (EMBL:X81320) (265 aa) fasta scores: E(): 1e-32%2C 36.68%25 id in 259 aa%2C and to Bacteroides thetaiotaomicron putative lipopolysaccharide biosynthesis glycosyltransferase BT1340 SWALL:AAO76447 (EMBL:AE016931) (270 aa) fasta scores: E(): 9.8e-48%2C 49.04%25 id in 261 aa%2C and to Klebsiella pneumoniae rhamnosyl transferase wbbL SWALL:Q9ZFN7 (EMBL:AF097519) (276 aa) fasta scores: E(): 1.2e-33%2C 38.46%25 id in 260 aa;codon_start=1;old_locus_tag=BF1563;product=putative lipopolysaccharide biosynthesis glycosyltransferase;protein_id=CAH07268.1;transl_table=11;translation=length.272
CR626927	GenBank	exon	11302	12120	.	+	1	Parent=BF9343_1487.t01
CR626927	GenBank	gene	12120	13028	.	+	1	ID=BF9343_1488;Name=BF9343_1488
CR626927	GenBank	gene_component_region	12402	12449	.	+	1	Parent=BF9343_1488;Name=BF9343_1488;Note=PS00589 PTS HPR component serine phosphorylation site signature.
CR626927	GenBank	gene_component_region	12429	12461	.	+	1	Parent=BF9343_1488;Name=BF9343_1488;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
CR626927	GenBank	mRNA	12120	13028	.	+	1	ID=BF9343_1488.t01;Parent=BF9343_1488
CR626927	GenBank	CDS	12120	13028	.	+	1	ID=BF9343_1488.p01;Parent=BF9343_1488.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1488,EnsemblGenomes-Tr:CAH07269,GOA:Q5LF29,InterPro:IPR001509,InterPro:IPR016040,UniProtKB/TrEMBL:Q5LF29;Name=BF9343_1488;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 UDP-GlcNac 4-epimerase Gne or Z3206 or ECS2847 SWALL:Q8X7P7 (EMBL:AF461121) (331 aa) fasta scores: E(): 1.5e-15%2C 29%25 id in 300 aa%2C and to Bacteroides thetaiotaomicron putative UDP-galactose 4-epimerase BT2887 SWALL:AAO77993 (EMBL:AE016937) (326 aa) fasta scores: E(): 1.9e-17%2C 29.71%25 id in 313 aa%2C and to Edwardsiella ictaluri UDP-glucose 4-epimerase WbeiT SWALL:Q937X6 (EMBL:AY057452) (323 aa) fasta scores: E(): 2.8e-14%2C 30.54%25 id in 311 aa;codon_start=1;old_locus_tag=BF1564;product=putative DNTP-hexose dehydratase-epimerase;protein_id=CAH07269.1;transl_table=11;translation=length.302
CR626927	GenBank	exon	12120	13028	.	+	1	Parent=BF9343_1488.t01
CR626927	GenBank	gene	13144	14091	.	+	1	ID=BF9343_1489;Name=BF9343_1489
CR626927	GenBank	gene_component_region	13153	13206	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13264	13317	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13327	13380	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13414	13467	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13477	13536	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13555	13623	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13633	13686	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13705	13773	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13792	13860	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13921	13989	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13999	14058	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=11 probable transmembrane helices predicted for BF1565 by TMHMM2.0 at aa 4-21%2C 41-58%2C 62-79%2C 91-108%2C 112-131%2C 138-160%2C 164-181%2C 188-210%2C 217-239%2C 260-282 and 286-305
CR626927	GenBank	gene_component_region	13330	13764	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=Pfam match to entry PF00953 Glycos_transf_4%2C Glycosyl transferase%2C score 18.3%2C E-value 4.6e-09
CR626927	GenBank	gene_component_region	13477	13509	.	+	1	Parent=BF9343_1489;Name=BF9343_1489;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
CR626927	GenBank	mRNA	13144	14091	.	+	1	ID=BF9343_1489.t01;Parent=BF9343_1489
CR626927	GenBank	CDS	13144	14091	.	+	1	ID=BF9343_1489.p01;Parent=BF9343_1489.t01;Dbxref=EnsemblGenomes-Gn:BF9343_1489,EnsemblGenomes-Tr:CAH07270,GOA:Q5LF28,InterPro:IPR000715,UniProtKB/TrEMBL:Q5LF28;Name=BF9343_1489;Note=Similar to previously sequenced Bacteroides fragilis putative UNDpp-quiNAc-p-transferase wcgX SWALL:Q9F748 (EMBL:AF285774) (316 aa) fasta scores: E(): 1.1e-109%2C 85.66%25 id in 314 aa%2C and to previously sequenced Bacteroides fragilis putative UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase wcfL SWALL:Q9XDJ1 (EMBL:AF048749) (318 aa) fasta scores: E(): 1.6e-107%2C 81.47%25 id in 313 aa%2C and to Bacteroides thetaiotaomicron putative udp-glcnac:undecaprenylphosphate glcnac-1-phosphate transferase BT0396 SWALL:AAO75503 (EMBL:AE016927) (329 aa) fasta scores: E(): 9.9e-66%2C 53.6%25 id in 319 aa;codon_start=1;old_locus_tag=BF1565;product=putative glycosyltransferase;protein_id=CAH07270.1;transl_table=11;translation=length.315
CR626927	GenBank	exon	13144	14091	.	+	1	Parent=BF9343_1489.t01