##gff-version 3
##sequence-region CP010397 1 10411
# conversion-by bp_genbank2gff3.pl
# organism Acinetobacter baumannii
# Note Acinetobacter baumannii strain 6200, complete genome.
# date 05-JAN-2015
CP010397	GenBank	region	1	10411	.	+	1	ID=CP010397;Dbxref=BioProject:PRJNA270223,taxon:470;Name=CP010397;Note=Acinetobacter baumannii strain 6200%2C complete genome.,Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Robert Bonomo (robert.bonomo@va.gov). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Assembly Name :: HGAP assembly of Acinetobacter baumannii 6200 Expected Final Version :: Yes Genome Coverage :: 10.11x Sequencing Technology :: Pacbio RS ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 12/23/2014 12:46:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set,GeneMarkS+ Annotation Software revision :: 2.9 (rev. 454913) Features Annotated :: Gene,CDS,rRNA,tRNA,ncRNA,repeat_region Genes :: 3,876 CDS :: 3,721 Pseudo Genes :: 62 rRNAs :: 18 ( 5S,16S,23S ) tRNAs :: 74 ncRNA :: 1 Frameshifted Genes :: 13 ##Genome-Annotation-Data-END## ;collection_date=2012;comment1=Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Robert Bonomo (robert.bonomo@va.gov). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Assembly Name :: HGAP assembly of Acinetobacter baumannii 6200 Expected Final Version :: Yes Genome Coverage :: 10.11x Sequencing Technology :: Pacbio RS ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 12/23/2014 12:46:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set%3B GeneMarkS+ Annotation Software revision :: 2.9 (rev. 454913) Features Annotated :: Gene%3B CDS%3B rRNA%3B tRNA%3B ncRNA%3B repeat_region Genes :: 3%2C876 CDS :: 3%2C721 Pseudo Genes :: 62 rRNAs :: 18 ( 5S%2C 16S%2C 23S ) tRNAs :: 74 ncRNA :: 1 Frameshifted Genes :: 13 ##Genome-Annotation-Data-END## ;country=Colombia;date=05-JAN-2015;host=Homo sapiens;isolation_source=Bodily fluid;lat_lon=2.59 N 75.18 W;mol_type=genomic DNA;organism=Acinetobacter baumannii;strain=6200
CP010397	GenBank	gene	1	927	.	+	1	ID=RU84_02930;Name=RU84_02930
CP010397	GenBank	mRNA	1	927	.	+	1	ID=RU84_02930.t01;Parent=RU84_02930
CP010397	GenBank	CDS	1	927	.	+	1	ID=RU84_02930.p01;Parent=RU84_02930.t01;eC_number=2.6.1.42;Name=RU84_02930;Note=catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids%3B Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012296979.1;product=branched-chain amino acid aminotransferase;protein_id=AJB65853.1;transl_table=11;translation=length.308
CP010397	GenBank	exon	1	927	.	+	1	Parent=RU84_02930.t01
CP010397	GenBank	gene	995	1882	.	+	1	ID=RU84_02935;Name=RU84_02935
CP010397	GenBank	mRNA	995	1882	.	+	1	ID=RU84_02935.t01;Parent=RU84_02935
CP010397	GenBank	CDS	995	1882	.	+	1	ID=RU84_02935.p01;Parent=RU84_02935.t01;Name=RU84_02935;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000548417.1;product=nucleoside-diphosphate sugar epimerase;protein_id=AJB65854.1;transl_table=11;translation=length.295
CP010397	GenBank	exon	995	1882	.	+	1	Parent=RU84_02935.t01
CP010397	GenBank	gene	1896	2705	.	+	1	ID=RU84_02940;Name=RU84_02940
CP010397	GenBank	mRNA	1896	2705	.	+	1	ID=RU84_02940.t01;Parent=RU84_02940
CP010397	GenBank	CDS	1896	2705	.	+	1	ID=RU84_02940.p01;Parent=RU84_02940.t01;Name=RU84_02940;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000499403.1;product=polysaccharide deacetylase;protein_id=AJB65855.1;transl_table=11;translation=length.269
CP010397	GenBank	exon	1896	2705	.	+	1	Parent=RU84_02940.t01
CP010397	GenBank	gene	2708	3691	.	+	1	ID=RU84_02945;Name=RU84_02945
CP010397	GenBank	mRNA	2708	3691	.	+	1	ID=RU84_02945.t01;Parent=RU84_02945
CP010397	GenBank	CDS	2708	3691	.	+	1	ID=RU84_02945.p01;Parent=RU84_02945.t01;Name=RU84_02945;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002133898.1;product=lipopolysaccharide biosynthesis protein;protein_id=AJB65856.1;transl_table=11;translation=length.327
CP010397	GenBank	exon	2708	3691	.	+	1	Parent=RU84_02945.t01
CP010397	GenBank	gene	3704	4747	.	+	1	ID=RU84_02950;Name=RU84_02950
CP010397	GenBank	mRNA	3704	4747	.	+	1	ID=RU84_02950.t01;Parent=RU84_02950
CP010397	GenBank	CDS	3704	4747	.	+	1	ID=RU84_02950.p01;Parent=RU84_02950.t01;Name=RU84_02950;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000193718.1;product=hypothetical protein;protein_id=AJB65857.1;transl_table=11;translation=length.347
CP010397	GenBank	exon	3704	4747	.	+	1	Parent=RU84_02950.t01
CP010397	GenBank	gene	4883	5950	.	+	1	ID=RU84_02955;Name=RU84_02955
CP010397	GenBank	mRNA	4883	5950	.	+	1	ID=RU84_02955.t01;Parent=RU84_02955
CP010397	GenBank	CDS	4883	5950	.	+	1	ID=RU84_02955.p01;Parent=RU84_02955.t01;Name=RU84_02955;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005109448.1;product=dTDP-glucose 4%2C6-dehydratase;protein_id=AJB65858.1;transl_table=11;translation=length.355
CP010397	GenBank	exon	4883	5950	.	+	1	Parent=RU84_02955.t01
CP010397	GenBank	gene	5953	6846	.	+	1	ID=RU84_02960;Name=RU84_02960
CP010397	GenBank	mRNA	5953	6846	.	+	1	ID=RU84_02960.t01;Parent=RU84_02960
CP010397	GenBank	CDS	5953	6846	.	+	1	ID=RU84_02960.p01;Parent=RU84_02960.t01;eC_number=1.1.1.133;Name=RU84_02960;Note=with dTDP-4-dehydrorhamnose 3%2C5-epimerase forms a complex known as dTDP-L-rhamnose synthetase%3B catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose%3B Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000698332.1;product=dTDP-4-dehydrorhamnose reductase;protein_id=AJB65859.1;transl_table=11;translation=length.297
CP010397	GenBank	exon	5953	6846	.	+	1	Parent=RU84_02960.t01
CP010397	GenBank	gene	6843	7733	.	+	1	ID=RU84_02965;Name=RU84_02965
CP010397	GenBank	mRNA	6843	7733	.	+	1	ID=RU84_02965.t01;Parent=RU84_02965
CP010397	GenBank	CDS	6843	7733	.	+	1	ID=RU84_02965.p01;Parent=RU84_02965.t01;Name=RU84_02965;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000054001.1;product=glucose-1-phosphate thymidylyltransferase;protein_id=AJB65860.1;transl_table=11;translation=length.296
CP010397	GenBank	exon	6843	7733	.	+	1	Parent=RU84_02965.t01
CP010397	GenBank	gene	7723	8274	.	+	1	ID=RU84_02970;Name=RU84_02970
CP010397	GenBank	mRNA	7723	8274	.	+	1	ID=RU84_02970.t01;Parent=RU84_02970
CP010397	GenBank	CDS	7723	8274	.	+	1	ID=RU84_02970.p01;Parent=RU84_02970.t01;Name=RU84_02970;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001195722.1;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=AJB65861.1;transl_table=11;translation=length.183
CP010397	GenBank	exon	7723	8274	.	+	1	Parent=RU84_02970.t01
CP010397	GenBank	gene	8302	9321	.	-	1	ID=RU84_02975;Name=RU84_02975
CP010397	GenBank	mRNA	8302	9321	.	-	1	ID=RU84_02975.t01;Parent=RU84_02975
CP010397	GenBank	CDS	8302	9321	.	-	1	ID=RU84_02975.p01;Parent=RU84_02975.t01;Name=RU84_02975;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005109453.1;product=glycosyl transferase;protein_id=AJB65862.1;transl_table=11;translation=length.339
CP010397	GenBank	exon	8302	9321	.	-	1	Parent=RU84_02975.t01
CP010397	GenBank	gene	9359	10297	.	-	1	ID=RU84_02980;Name=RU84_02980
CP010397	GenBank	mRNA	9359	10297	.	-	1	ID=RU84_02980.t01;Parent=RU84_02980
CP010397	GenBank	CDS	9359	10297	.	-	1	ID=RU84_02980.p01;Parent=RU84_02980.t01;Name=RU84_02980;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001170028.1;product=glycosyltransferase;protein_id=AJB65863.1;transl_table=11;translation=length.312
CP010397	GenBank	exon	9359	10297	.	-	1	Parent=RU84_02980.t01
CP010397	GenBank	gene	10297	10411	.	-	1	ID=RU84_02985;Name=RU84_02985
CP010397	GenBank	mRNA	10297	10411	.	-	1	ID=RU84_02985.t01;Parent=RU84_02985
CP010397	GenBank	CDS	10297	10411	.	-	1	ID=RU84_02985.p01;Parent=RU84_02985.t01;Name=RU84_02985;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=3;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001251491.1;product=membrane protein;protein_id=AJB65864.1;transl_table=11;translation=length.72
CP010397	GenBank	exon	10297	10411	.	-	1	Parent=RU84_02985.t01