##gff-version 3
##sequence-region NC_021020 1 5560
# conversion-by bp_genbank2gff3.pl
# organism Faecalibacterium prausnitzii SL3/3
# Note Faecalibacterium prausnitzii SL3/3, complete sequence.
# date 17-APR-2023
NC_021020	GenBank	region	1	5560	.	+	1	ID=NC_021020;Dbxref=BioProject:PRJNA224116,taxon:657322;Name=NC_021020;Note=Faecalibacterium prausnitzii SL3/3%2C complete sequence.,REFSEQ INFORMATION: The reference sequence is identical to FP929046.1.  This is a reference genome for the metaHIT project DNA source:  Rowett Institute of Nutrition and Health,University of Aberdeen --  http://www.rowett.ac.uk/divisions/ghp/ Sequencing technology: 454  Genome coverage: 20x  Annotation was added using ab initio prediction IMG/ER --  http://img.jgi.doe.gov/submit (Markowitz,Szeto et al. 2007).  The annotation was added by the NCBI Prokaryotic Genome Annotation  Pipeline (PGAP). Information about PGAP can be found here:  https://www.ncbi.nlm.nih.gov/genome/annotation_prok/    \n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/17/2023 00:57:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\nAnnotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\nset,GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene,CDS,rRNA,tRNA,ncRNA\nGenes (total) :: 3,219\nCDSs (total) :: 3,145\nGenes (coding) :: 3,077\nCDSs (with protein) :: 3,077\nGenes (RNA) :: 74\nrRNAs :: 1 (23S)\ncomplete rRNAs :: 1 (23S)\ntRNAs :: 69\nncRNAs :: 4\nPseudo Genes (total) :: 68\nCDSs (without protein) :: 68\nPseudo Genes (ambiguous residues) :: 0 of 68\nPseudo Genes (frameshifted) :: 12 of 68\nPseudo Genes (incomplete) :: 56 of 68\nPseudo Genes (internal stop) :: 6 of 68\nPseudo Genes (multiple problems) :: 6 of 68\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##;comment1=REFSEQ INFORMATION: The reference sequence is identical to FP929046.1.  This is a reference genome for the metaHIT project DNA source:  Rowett Institute of Nutrition and Health%2C University of Aberdeen --  http://www.rowett.ac.uk/divisions/ghp/ Sequencing technology: 454  Genome coverage: 20x  Annotation was added using ab initio prediction IMG/ER --  http://img.jgi.doe.gov/submit (Markowitz%2C Szeto et al. 2007).  The annotation was added by the NCBI Prokaryotic Genome Annotation  Pipeline (PGAP). Information about PGAP can be found here:  https://www.ncbi.nlm.nih.gov/genome/annotation_prok/    \n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/17/2023 00:57:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\nAnnotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\nset%3B GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene%3B CDS%3B rRNA%3B tRNA%3B ncRNA\nGenes (total) :: 3%2C219\nCDSs (total) :: 3%2C145\nGenes (coding) :: 3%2C077\nCDSs (with protein) :: 3%2C077\nGenes (RNA) :: 74\nrRNAs :: 1 (23S)\ncomplete rRNAs :: 1 (23S)\ntRNAs :: 69\nncRNAs :: 4\nPseudo Genes (total) :: 68\nCDSs (without protein) :: 68\nPseudo Genes (ambiguous residues) :: 0 of 68\nPseudo Genes (frameshifted) :: 12 of 68\nPseudo Genes (incomplete) :: 56 of 68\nPseudo Genes (internal stop) :: 6 of 68\nPseudo Genes (multiple problems) :: 6 of 68\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##;date=17-APR-2023;mol_type=genomic DNA;organism=Faecalibacterium prausnitzii SL3/3;strain=SL3/3
NC_021020	GenBank	gene	1	3072	.	+	1	ID=FPR_RS04860;Name=FPR_RS04860;old_locus_tag=FPR_09740
NC_021020	GenBank	mRNA	1	3072	.	+	1	ID=FPR_RS04860.t01;Parent=FPR_RS04860
NC_021020	GenBank	CDS	1	3072	.	+	1	ID=FPR_RS04860;Parent=FPR_RS04860.t01;gO_function=GO:0004553 - hydrolase activity%2C hydrolyzing O-glycosyl compounds [Evidence IEA];gO_process=GO:0005975 - carbohydrate metabolic process [Evidence IEA];Name=FPR_RS04860;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006735319.1;old_locus_tag=FPR_09740;product=glycoside hydrolase family 3 N-terminal domain-containing protein;protein_id=WP_015537135.1;transl_table=11;translation=length.1023
NC_021020	GenBank	exon	1	3072	.	+	1	Parent=FPR_RS04860.t01
NC_021020	GenBank	gene	3143	5560	.	+	1	ID=FPR_RS04865;Name=FPR_RS04865;old_locus_tag=FPR_09750
NC_021020	GenBank	mRNA	3143	5560	.	+	1	ID=FPR_RS04865.t01;Parent=FPR_RS04865
NC_021020	GenBank	CDS	3143	5560	.	+	1	ID=FPR_RS04865;Parent=FPR_RS04865.t01;gO_function=GO:0004553 - hydrolase activity%2C hydrolyzing O-glycosyl compounds [Evidence IEA];gO_process=GO:0005975 - carbohydrate metabolic process [Evidence IEA];Name=FPR_RS04865;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015537136.1;old_locus_tag=FPR_09750;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_015537136.1;transl_table=11;translation=length.805
NC_021020	GenBank	exon	3143	5560	.	+	1	Parent=FPR_RS04865.t01