##gff-version 3
##sequence-region AE005176 1 13187
# conversion-by bp_genbank2gff3.pl
# organism Lactococcus lactis subsp. lactis Il1403
# Note Lactococcus lactis subsp. lactis Il1403, complete genome.
# date 30-JAN-2014
AE005176	GenBank	region	1	13187	.	+	1	ID=AE005176;Dbxref=BioProject:PRJNA72,taxon:272623;Name=AE005176;Note=Lactococcus lactis subsp. lactis Il1403%2C complete genome.,On or before Feb 26,2009 this sequence version replaced AE006239.1,AE006240.1,AE006241.1,AE006242.1,AE006243.1,AE006244.1,AE006245.1,AE006246.1,AE006247.1,AE006248.1,AE006249.1,AE006250.1,AE006251.1,AE006252.1,AE006253.1,AE006254.1,AE006255.1,AE006256.1,AE006257.1,AE006258.1,AE006259.1,AE006260.1,AE006261.1,AE006262.1,AE006263.1,AE006264.1,AE006265.1,AE006266.1,AE006267.1,AE006268.1,AE006269.1,AE006270.1,AE006271.1,AE006272.1,AE006273.1,AE006274.1,AE006275.1,AE006276.1,AE006277.1,AE006278.1,AE006279.1,AE006280.1,AE006281.1,AE006282.1,AE006283.1,AE006284.1,AE006285.1,AE006286.1,AE006287.1,AE006288.1,AE006289.1,AE006290.1,AE006291.1,AE006292.1,AE006293.1,AE006294.1,AE006295.1,AE006296.1,AE006297.1,AE006298.1,AE006299.1,AE006300.1,AE006301.1,AE006302.1,AE006303.1,AE006304.1,AE006305.1,AE006306.1,AE006307.1,AE006308.1,AE006309.1,AE006310.1,AE006311.1,AE006312.1,AE006313.1,AE006314.1,AE006315.1,AE006316.1,AE006317.1,AE006318.1,AE006319.1,AE006320.1,AE006321.1,AE006322.1,AE006323.1,AE006324.1,AE006325.1,AE006326.1,AE006327.1,AE006328.1,AE006329.1,AE006330.1,AE006331.1,AE006332.1,AE006333.1,AE006334.1,AE006335.1,AE006336.1,AE006337.1,AE006338.1,AE006339.1,AE006340.1,AE006341.1,AE006342.1,AE006343.1,AE006344.1,AE006345.1,AE006346.1,AE006347.1,AE006348.1,AE006349.1,AE006350.1,AE006351.1,AE006352.1,AE006353.1,AE006354.1,AE006355.1,AE006356.1,AE006357.1,AE006358.1,AE006359.1,AE006360.1,AE006361.1,AE006362.1,AE006363.1,AE006364.1,AE006365.1,AE006366.1,AE006367.1,AE006368.1,AE006369.1,AE006370.1,AE006371.1,AE006372.1,AE006373.1,AE006374.1,AE006375.1,AE006376.1,AE006377.1,AE006378.1,AE006379.1,AE006380.1,AE006381.1,AE006382.1,AE006383.1,AE006384.1,AE006385.1,AE006386.1,AE006387.1,AE006388.1,AE006389.1,AE006390.1,AE006391.1,AE006392.1,AE006393.1,AE006394.1,AE006395.1,AE006396.1,AE006397.1,AE006398.1,AE006399.1,AE006400.1,AE006401.1,AE006402.1,AE006403.1,AE006404.1,AE006405.1,AE006406.1,AE006407.1,AE006408.1,AE006409.1,AE006410.1,AE006411.1,AE006412.1,AE006413.1,AE006414.1,AE006415.1,AE006416.1,AE006417.1,AE006418.1,AE006419.1,AE006420.1,AE006421.1,AE006422.1,AE006423.1,AE006424.1,AE006425.1,AE006426.1,AE006427.1,AE006428.1,AE006429.1,AE006430.1,AE006431.1,AE006432.1,AE006433.1,AE006434.1,AE006435.1,AE006436.1,AE006437.1,AE006438.1,AE006439.1,AE006440.1,AE006441.1,AE006442.1,AE006443.1,AE006444.1,AE006445.1,AE006446.1,AE006447.1,AE006448.1,AE006449.1,AE006450.1,AE006451.1,AE006452.1,AE006453.1,AE006454.1,AE006455.1,AE006456.1. ;comment1=On or before Feb 26%2C 2009 this sequence version replaced AE006239.1%2C AE006240.1%2C AE006241.1%2C AE006242.1%2C AE006243.1%2C AE006244.1%2C AE006245.1%2C AE006246.1%2C AE006247.1%2C AE006248.1%2C AE006249.1%2C AE006250.1%2C AE006251.1%2C AE006252.1%2C AE006253.1%2C AE006254.1%2C AE006255.1%2C AE006256.1%2C AE006257.1%2C AE006258.1%2C AE006259.1%2C AE006260.1%2C AE006261.1%2C AE006262.1%2C AE006263.1%2C AE006264.1%2C AE006265.1%2C AE006266.1%2C AE006267.1%2C AE006268.1%2C AE006269.1%2C AE006270.1%2C AE006271.1%2C AE006272.1%2C AE006273.1%2C AE006274.1%2C AE006275.1%2C AE006276.1%2C AE006277.1%2C AE006278.1%2C AE006279.1%2C AE006280.1%2C AE006281.1%2C AE006282.1%2C AE006283.1%2C AE006284.1%2C AE006285.1%2C AE006286.1%2C AE006287.1%2C AE006288.1%2C AE006289.1%2C AE006290.1%2C AE006291.1%2C AE006292.1%2C AE006293.1%2C AE006294.1%2C AE006295.1%2C AE006296.1%2C AE006297.1%2C AE006298.1%2C AE006299.1%2C AE006300.1%2C AE006301.1%2C AE006302.1%2C AE006303.1%2C AE006304.1%2C AE006305.1%2C AE006306.1%2C AE006307.1%2C AE006308.1%2C AE006309.1%2C AE006310.1%2C AE006311.1%2C AE006312.1%2C AE006313.1%2C AE006314.1%2C AE006315.1%2C AE006316.1%2C AE006317.1%2C AE006318.1%2C AE006319.1%2C AE006320.1%2C AE006321.1%2C AE006322.1%2C AE006323.1%2C AE006324.1%2C AE006325.1%2C AE006326.1%2C AE006327.1%2C AE006328.1%2C AE006329.1%2C AE006330.1%2C AE006331.1%2C AE006332.1%2C AE006333.1%2C AE006334.1%2C AE006335.1%2C AE006336.1%2C AE006337.1%2C AE006338.1%2C AE006339.1%2C AE006340.1%2C AE006341.1%2C AE006342.1%2C AE006343.1%2C AE006344.1%2C AE006345.1%2C AE006346.1%2C AE006347.1%2C AE006348.1%2C AE006349.1%2C AE006350.1%2C AE006351.1%2C AE006352.1%2C AE006353.1%2C AE006354.1%2C AE006355.1%2C AE006356.1%2C AE006357.1%2C AE006358.1%2C AE006359.1%2C AE006360.1%2C AE006361.1%2C AE006362.1%2C AE006363.1%2C AE006364.1%2C AE006365.1%2C AE006366.1%2C AE006367.1%2C AE006368.1%2C AE006369.1%2C AE006370.1%2C AE006371.1%2C AE006372.1%2C AE006373.1%2C AE006374.1%2C AE006375.1%2C AE006376.1%2C AE006377.1%2C AE006378.1%2C AE006379.1%2C AE006380.1%2C AE006381.1%2C AE006382.1%2C AE006383.1%2C AE006384.1%2C AE006385.1%2C AE006386.1%2C AE006387.1%2C AE006388.1%2C AE006389.1%2C AE006390.1%2C AE006391.1%2C AE006392.1%2C AE006393.1%2C AE006394.1%2C AE006395.1%2C AE006396.1%2C AE006397.1%2C AE006398.1%2C AE006399.1%2C AE006400.1%2C AE006401.1%2C AE006402.1%2C AE006403.1%2C AE006404.1%2C AE006405.1%2C AE006406.1%2C AE006407.1%2C AE006408.1%2C AE006409.1%2C AE006410.1%2C AE006411.1%2C AE006412.1%2C AE006413.1%2C AE006414.1%2C AE006415.1%2C AE006416.1%2C AE006417.1%2C AE006418.1%2C AE006419.1%2C AE006420.1%2C AE006421.1%2C AE006422.1%2C AE006423.1%2C AE006424.1%2C AE006425.1%2C AE006426.1%2C AE006427.1%2C AE006428.1%2C AE006429.1%2C AE006430.1%2C AE006431.1%2C AE006432.1%2C AE006433.1%2C AE006434.1%2C AE006435.1%2C AE006436.1%2C AE006437.1%2C AE006438.1%2C AE006439.1%2C AE006440.1%2C AE006441.1%2C AE006442.1%2C AE006443.1%2C AE006444.1%2C AE006445.1%2C AE006446.1%2C AE006447.1%2C AE006448.1%2C AE006449.1%2C AE006450.1%2C AE006451.1%2C AE006452.1%2C AE006453.1%2C AE006454.1%2C AE006455.1%2C AE006456.1. ;date=30-JAN-2014;mol_type=genomic DNA;organism=Lactococcus lactis subsp. lactis Il1403;strain=IL1403;sub_species=lactis
AE005176	GenBank	gene	1	945	.	-	1	ID=L36511;Name=yufC;locus_tag=L36511
AE005176	GenBank	mRNA	1	945	.	-	1	ID=L36511.t01;Parent=L36511
AE005176	GenBank	CDS	1	945	.	-	1	ID=L36511.p01;Parent=L36511.t01;Name=yufC;Note=EVIDENCE BY HOMOLOGY BIO15.01 HYPOTHETICAL;codon_start=1;locus_tag=L36511;product=hypothetical protein;protein_id=AAK06076.1;transl_table=11;translation=length.314
AE005176	GenBank	exon	1	945	.	-	1	Parent=L36511.t01
AE005176	GenBank	gene	1068	2048	.	-	1	ID=L0024;Name=galE;locus_tag=L0024
AE005176	GenBank	mRNA	1068	2048	.	-	1	ID=L0024.t01;Parent=L0024
AE005176	GenBank	CDS	1068	2048	.	-	1	ID=L0024.p01;Parent=L0024.t01;eC_number=5.1.3.2;Name=galE;Note=EVIDENCE BY HOMOLOGY BIO06.12 Sugars. GALACTOSE METABOLISM;codon_start=1;locus_tag=L0024;product=UDP-glucose 4-epimerase;protein_id=AAK06077.1;transl_table=11;translation=length.326
AE005176	GenBank	exon	1068	2048	.	-	1	Parent=L0024.t01
AE005176	GenBank	gene	2100	5090	.	-	1	ID=L0025;Name=lacZ;locus_tag=L0025
AE005176	GenBank	mRNA	2100	5090	.	-	1	ID=L0025.t01;Parent=L0025
AE005176	GenBank	CDS	2100	5090	.	-	1	ID=L0025.p01;Parent=L0025.t01;eC_number=3.2.1.23;Name=lacZ;Note=EVIDENCE BY HOMOLOGY BIO06.12 Sugars. GALACTOSE METABOLISM;codon_start=1;locus_tag=L0025;product=beta-galactosidase;protein_id=AAK06078.1;transl_table=11;translation=length.996
AE005176	GenBank	exon	2100	5090	.	-	1	Parent=L0025.t01
AE005176	GenBank	gene	5102	5563	.	-	1	ID=L0026;Name=thgA;locus_tag=L0026
AE005176	GenBank	mRNA	5102	5563	.	-	1	ID=L0026.t01;Parent=L0026
AE005176	GenBank	CDS	5102	5563	.	-	1	ID=L0026.p01;Parent=L0026.t01;eC_number=2.3.1.18;Name=thgA;Note=EVIDENCE BY HOMOLOGY BIO06.12 Sugars. GALACTOSE METABOLISM;codon_start=1;locus_tag=L0026;product=thiogalactoside acetyltransferase;protein_id=AAK06079.1;transl_table=11;translation=length.153
AE005176	GenBank	exon	5102	5563	.	-	1	Parent=L0026.t01
AE005176	GenBank	gene	5765	7246	.	-	1	ID=L0027;Name=galT;locus_tag=L0027
AE005176	GenBank	mRNA	5765	7246	.	-	1	ID=L0027.t01;Parent=L0027
AE005176	GenBank	CDS	5765	7246	.	-	1	ID=L0027.p01;Parent=L0027.t01;eC_number=2.7.7.10;Name=galT;Note=EVIDENCE BY HOMOLOGY BIO06.12 ENERGY METABOLISM. Sugars. GALACTOSE METABOLISM;codon_start=1;locus_tag=L0027;product=galactose-1-phosphate uridylyltransferase;protein_id=AAK06080.1;transl_table=11;translation=length.493
AE005176	GenBank	exon	5765	7246	.	-	1	Parent=L0027.t01
AE005176	GenBank	gene	7420	8619	.	-	1	ID=L0028;Name=galK;locus_tag=L0028
AE005176	GenBank	mRNA	7420	8619	.	-	1	ID=L0028.t01;Parent=L0028
AE005176	GenBank	CDS	7420	8619	.	-	1	ID=L0028.p01;Parent=L0028.t01;eC_number=2.7.1.6;Name=galK;Note=EVIDENCE BY HOMOLOGY BIO06.12 ENERGY METABOLISM. Sugars. GALACTOSE METABOLISM;codon_start=1;locus_tag=L0028;product=galactokinase;protein_id=AAK06081.1;transl_table=11;translation=length.399
AE005176	GenBank	exon	7420	8619	.	-	1	Parent=L0028.t01
AE005176	GenBank	gene	8646	9665	.	-	1	ID=L0029;Name=galM;locus_tag=L0029
AE005176	GenBank	mRNA	8646	9665	.	-	1	ID=L0029.t01;Parent=L0029
AE005176	GenBank	CDS	8646	9665	.	-	1	ID=L0029.p01;Parent=L0029.t01;eC_number=5.1.3.3;Name=galM;Note=EVIDENCE BY HOMOLOGY BIO06.12 Sugars. GALACTOSE METABOLISM;codon_start=1;locus_tag=L0029;product=aldose 1-epimerase;protein_id=AAK06082.1;transl_table=11;translation=length.339
AE005176	GenBank	exon	8646	9665	.	-	1	Parent=L0029.t01
AE005176	GenBank	gene	9795	10739	.	-	1	ID=lacS;Name=lacS;Note=EVIDENCE BY HOMOLOGY BIO13.04 TRANSPORT AND BINDING proteinS. Carbohydrates%2C organic alcohols and acids. gene contains a frameshift mutation at position 453.
AE005176	GenBank	gene	11461	12195	.	-	1	ID=L47971;Name=yugA;locus_tag=L47971
AE005176	GenBank	mRNA	11461	12195	.	-	1	ID=L47971.t01;Parent=L47971
AE005176	GenBank	CDS	11461	12195	.	-	1	ID=L47971.p01;Parent=L47971.t01;Name=yugA;Note=EVIDENCE BY HOMOLOGY BIO09.01 REGULATORY FUNCTIONS. General. There are eight paralogs in L.lactis. Belongs to RpiR family of transcription regulators.;codon_start=1;locus_tag=L47971;product=transcription regulator;protein_id=AAK06083.1;transl_table=11;translation=length.244
AE005176	GenBank	exon	11461	12195	.	-	1	Parent=L47971.t01
AE005176	GenBank	gene	12324	13187	.	+	1	ID=L48789;Name=yugB;locus_tag=L48789
AE005176	GenBank	mRNA	12324	13187	.	+	1	ID=L48789.t01;Parent=L48789
AE005176	GenBank	CDS	12324	13187	.	+	1	ID=L48789.p01;Parent=L48789.t01;Name=yugB;Note=EVIDENCE BY HOMOLOGY BIO06.01 ENERGY METABOLISM. Aerobic. There are six paralogs in L.lactis;codon_start=1;locus_tag=L48789;product=oxidoreductase;protein_id=AAK06084.1;transl_table=11;translation=length.287
AE005176	GenBank	exon	12324	13187	.	+	1	Parent=L48789.t01