##gff-version 3
##sequence-region NZ_KB849308 1 23476
# conversion-by bp_genbank2gff3.pl
# organism Acinetobacter baumannii NIPH 146
# Note Acinetobacter baumannii NIPH 146 acLZd-supercont-complete, whole genome shotgun sequence.
# date 08-NOV-2019
NZ_KB849308	GenBank	region	1	23476	.	+	1	ID=NZ_KB849308;Dbxref=BioProject:PRJNA224116,taxon:1217639;Name=NZ_KB849308;Note=Acinetobacter baumannii NIPH 146 acLZd-supercont-complete%2C whole genome shotgun sequence.,REFSEQ INFORMATION: The reference sequence was derived from KB849308. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Please be aware that the annotation is done automatically with little or no manual curation. ##Genome-Assembly-Data-START## Assembly Method :: allpaths v. R43241 Assembly Name :: Acin_baum_NIPH_146_V1 Genome Coverage :: 273.0x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/08/2019 04:26:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set,GeneMarkS-2+ Annotation Software revision :: 4.10 Features Annotated :: Gene,CDS,rRNA,tRNA,ncRNA,repeat_region Genes (total) :: 3,724 CDSs (total) :: 3,639 Genes (coding) :: 3,608 CDSs (with protein) :: 3,608 Genes (RNA) :: 85 rRNAs :: 5,4,4 (5S,16S,23S) complete rRNAs :: 5,4,3 (5S,16S,23S) partial rRNAs :: 1 (23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 31 Pseudo Genes (ambiguous residues) :: 3 of 32 Pseudo Genes (frameshifted) :: 11 of 32 Pseudo Genes (incomplete) :: 14 of 32 Pseudo Genes (internal stop) :: 6 of 32 Pseudo Genes (multiple problems) :: 3 of 32 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## ;collection_date=1993;comment1=REFSEQ INFORMATION: The reference sequence was derived from KB849308. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Please be aware that the annotation is done automatically with little or no manual curation. ##Genome-Assembly-Data-START## Assembly Method :: allpaths v. R43241 Assembly Name :: Acin_baum_NIPH_146_V1 Genome Coverage :: 273.0x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/08/2019 04:26:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set%3B GeneMarkS-2+ Annotation Software revision :: 4.10 Features Annotated :: Gene%3B CDS%3B rRNA%3B tRNA%3B ncRNA%3B repeat_region Genes (total) :: 3%2C724 CDSs (total) :: 3%2C639 Genes (coding) :: 3%2C608 CDSs (with protein) :: 3%2C608 Genes (RNA) :: 85 rRNAs :: 5%2C 4%2C 4 (5S%2C 16S%2C 23S) complete rRNAs :: 5%2C 4%2C 3 (5S%2C 16S%2C 23S) partial rRNAs :: 1 (23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 31 Pseudo Genes (ambiguous residues) :: 3 of 32 Pseudo Genes (frameshifted) :: 11 of 32 Pseudo Genes (incomplete) :: 14 of 32 Pseudo Genes (internal stop) :: 6 of 32 Pseudo Genes (multiple problems) :: 3 of 32 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## ;country=Czech Republic: Praha;date=08-NOV-2019;host=Homo sapiens;isolation_source=wound;mol_type=genomic DNA;organism=Acinetobacter baumannii NIPH 146;strain=NIPH 146;submitter_seqid=acLZd-supercont-complete
NZ_KB849308	GenBank	gene	1	723	.	-	1	ID=F979_RS06965;Name=F979_RS06965;old_locus_tag=F979_00563
NZ_KB849308	GenBank	mRNA	1	723	.	-	1	ID=F979_RS06965.t01;Parent=F979_RS06965
NZ_KB849308	GenBank	CDS	1	723	.	-	1	ID=F979_RS06965.p01;Parent=F979_RS06965.t01;Name=F979_RS06965;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997235.1;old_locus_tag=F979_00563;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000030410.1;transl_table=11;translation=length.240
NZ_KB849308	GenBank	exon	1	723	.	-	1	Parent=F979_RS06965.t01
NZ_KB849308	GenBank	gene	917	3112	.	-	1	ID=F979_RS06970;Name=F979_RS06970;old_locus_tag=F979_00564
NZ_KB849308	GenBank	mRNA	917	3112	.	-	1	ID=F979_RS06970.t01;Parent=F979_RS06970
NZ_KB849308	GenBank	CDS	917	3112	.	-	1	ID=F979_RS06970.p01;Parent=F979_RS06970.t01;eC_number=2.7.10.2;Name=F979_RS06970;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004988781.1;old_locus_tag=F979_00564;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_004735643.1;transl_table=11;translation=length.731
NZ_KB849308	GenBank	exon	917	3112	.	-	1	Parent=F979_RS06970.t01
NZ_KB849308	GenBank	gene	3134	3562	.	-	1	ID=F979_RS06975;Name=F979_RS06975;old_locus_tag=F979_00565
NZ_KB849308	GenBank	mRNA	3134	3562	.	-	1	ID=F979_RS06975.t01;Parent=F979_RS06975
NZ_KB849308	GenBank	CDS	3134	3562	.	-	1	ID=F979_RS06975.p01;Parent=F979_RS06975.t01;Name=F979_RS06975;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277819.1;old_locus_tag=F979_00565;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_002050525.1;transl_table=11;translation=length.142
NZ_KB849308	GenBank	exon	3134	3562	.	-	1	Parent=F979_RS06975.t01
NZ_KB849308	GenBank	gene	3564	4664	.	-	1	ID=F979_RS06980;Name=F979_RS06980;old_locus_tag=F979_00566
NZ_KB849308	GenBank	mRNA	3564	4664	.	-	1	ID=F979_RS06980.t01;Parent=F979_RS06980
NZ_KB849308	GenBank	CDS	3564	4664	.	-	1	ID=F979_RS06980.p01;Parent=F979_RS06980.t01;Name=F979_RS06980;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004858548.1;old_locus_tag=F979_00566;product=membrane protein;protein_id=WP_025469400.1;transl_table=11;translation=length.366
NZ_KB849308	GenBank	exon	3564	4664	.	-	1	Parent=F979_RS06980.t01
NZ_KB849308	GenBank	gene	4869	6146	.	+	1	ID=F979_RS06985;Name=tviB;locus_tag=F979_RS06985;old_locus_tag=F979_00567
NZ_KB849308	GenBank	mRNA	4869	6146	.	+	1	ID=F979_RS06985.t01;Parent=F979_RS06985
NZ_KB849308	GenBank	CDS	4869	6146	.	+	1	ID=F979_RS06985.p01;Parent=F979_RS06985.t01;Name=tviB;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004988771.1;locus_tag=F979_RS06985;old_locus_tag=F979_00567;product=Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB;protein_id=WP_004735649.1;transl_table=11;translation=length.425
NZ_KB849308	GenBank	exon	4869	6146	.	+	1	Parent=F979_RS06985.t01
NZ_KB849308	GenBank	gene	6149	7438	.	+	1	ID=F979_RS06990;Name=F979_RS06990;old_locus_tag=F979_00568
NZ_KB849308	GenBank	mRNA	6149	7438	.	+	1	ID=F979_RS06990.t01;Parent=F979_RS06990
NZ_KB849308	GenBank	CDS	6149	7438	.	+	1	ID=F979_RS06990.p01;Parent=F979_RS06990.t01;Name=F979_RS06990;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006582364.1;old_locus_tag=F979_00568;product=polysaccharide biosynthesis protein;protein_id=WP_002123321.1;transl_table=11;translation=length.429
NZ_KB849308	GenBank	exon	6149	7438	.	+	1	Parent=F979_RS06990.t01
NZ_KB849308	GenBank	gene	7438	8385	.	+	1	ID=F979_RS06995;Name=F979_RS06995;old_locus_tag=F979_00569
NZ_KB849308	GenBank	mRNA	7438	8385	.	+	1	ID=F979_RS06995.t01;Parent=F979_RS06995
NZ_KB849308	GenBank	CDS	7438	8385	.	+	1	ID=F979_RS06995.p01;Parent=F979_RS06995.t01;Name=F979_RS06995;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002123312.1;old_locus_tag=F979_00569;product=glycosyltransferase;protein_id=WP_004735653.1;transl_table=11;translation=length.315
NZ_KB849308	GenBank	exon	7438	8385	.	+	1	Parent=F979_RS06995.t01
NZ_KB849308	GenBank	gene	8535	9542	.	+	1	ID=F979_RS07000;Name=F979_RS07000;old_locus_tag=F979_00570
NZ_KB849308	GenBank	mRNA	8535	9542	.	+	1	ID=F979_RS07000.t01;Parent=F979_RS07000
NZ_KB849308	GenBank	CDS	8535	9542	.	+	1	ID=F979_RS07000.p01;Parent=F979_RS07000.t01;Name=F979_RS07000;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002123295.1;old_locus_tag=F979_00570;product=glycosyltransferase family 2 protein;protein_id=WP_002123295.1;transl_table=11;translation=length.335
NZ_KB849308	GenBank	exon	8535	9542	.	+	1	Parent=F979_RS07000.t01
NZ_KB849308	GenBank	gene	9549	10589	.	+	1	ID=F979_RS07005;Name=F979_RS07005;old_locus_tag=F979_00571
NZ_KB849308	GenBank	mRNA	9549	10589	.	+	1	ID=F979_RS07005.t01;Parent=F979_RS07005
NZ_KB849308	GenBank	CDS	9549	10589	.	+	1	ID=F979_RS07005.p01;Parent=F979_RS07005.t01;Name=F979_RS07005;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002123290.1;old_locus_tag=F979_00571;product=EpsG family protein;protein_id=WP_002123290.1;transl_table=11;translation=length.346
NZ_KB849308	GenBank	exon	9549	10589	.	+	1	Parent=F979_RS07005.t01
NZ_KB849308	GenBank	gene	10603	11637	.	+	1	ID=F979_RS07010;Name=F979_RS07010;old_locus_tag=F979_00572
NZ_KB849308	GenBank	mRNA	10603	11637	.	+	1	ID=F979_RS07010.t01;Parent=F979_RS07010
NZ_KB849308	GenBank	CDS	10603	11637	.	+	1	ID=F979_RS07010.p01;Parent=F979_RS07010.t01;Name=F979_RS07010;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005037631.1;old_locus_tag=F979_00572;product=glycosyltransferase family 4 protein;protein_id=WP_004735655.1;transl_table=11;translation=length.344
NZ_KB849308	GenBank	exon	10603	11637	.	+	1	Parent=F979_RS07010.t01
NZ_KB849308	GenBank	gene	11644	12471	.	+	1	ID=F979_RS07015;Name=F979_RS07015;old_locus_tag=F979_00573
NZ_KB849308	GenBank	mRNA	11644	12471	.	+	1	ID=F979_RS07015.t01;Parent=F979_RS07015
NZ_KB849308	GenBank	CDS	11644	12471	.	+	1	ID=F979_RS07015.p01;Parent=F979_RS07015.t01;Name=F979_RS07015;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493223.1;old_locus_tag=F979_00573;product=glycosyltransferase;protein_id=WP_002123301.1;transl_table=11;translation=length.275
NZ_KB849308	GenBank	exon	11644	12471	.	+	1	Parent=F979_RS07015.t01
NZ_KB849308	GenBank	gene	12484	13104	.	+	1	ID=F979_RS07020;Name=F979_RS07020;old_locus_tag=F979_00574
NZ_KB849308	GenBank	mRNA	12484	13104	.	+	1	ID=F979_RS07020.t01;Parent=F979_RS07020
NZ_KB849308	GenBank	CDS	12484	13104	.	+	1	ID=F979_RS07020.p01;Parent=F979_RS07020.t01;Name=F979_RS07020;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000826960.1;old_locus_tag=F979_00574;product=sugar transferase;protein_id=WP_004735659.1;transl_table=11;translation=length.206
NZ_KB849308	GenBank	exon	12484	13104	.	+	1	Parent=F979_RS07020.t01
NZ_KB849308	GenBank	gene	13129	14004	.	+	1	ID=F979_RS07025;Name=galU;locus_tag=F979_RS07025;old_locus_tag=F979_00575
NZ_KB849308	GenBank	mRNA	13129	14004	.	+	1	ID=F979_RS07025.t01;Parent=F979_RS07025
NZ_KB849308	GenBank	CDS	13129	14004	.	+	1	ID=F979_RS07025.p01;Parent=F979_RS07025.t01;eC_number=2.7.7.9;Name=galU;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997252.1;locus_tag=F979_RS07025;old_locus_tag=F979_00575;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_004735661.1;transl_table=11;translation=length.291
NZ_KB849308	GenBank	exon	13129	14004	.	+	1	Parent=F979_RS07025.t01
NZ_KB849308	GenBank	gene	14120	15382	.	+	1	ID=F979_RS07030;Name=F979_RS07030;old_locus_tag=F979_00576
NZ_KB849308	GenBank	mRNA	14120	15382	.	+	1	ID=F979_RS07030.t01;Parent=F979_RS07030
NZ_KB849308	GenBank	CDS	14120	15382	.	+	1	ID=F979_RS07030.p01;Parent=F979_RS07030.t01;Name=F979_RS07030;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997253.1;old_locus_tag=F979_00576;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_000686130.1;transl_table=11;translation=length.420
NZ_KB849308	GenBank	exon	14120	15382	.	+	1	Parent=F979_RS07030.t01
NZ_KB849308	GenBank	gene	15379	17049	.	+	1	ID=F979_RS07035;Name=F979_RS07035;old_locus_tag=F979_00577
NZ_KB849308	GenBank	mRNA	15379	17049	.	+	1	ID=F979_RS07035.t01;Parent=F979_RS07035
NZ_KB849308	GenBank	CDS	15379	17049	.	+	1	ID=F979_RS07035.p01;Parent=F979_RS07035.t01;eC_number=5.3.1.9;Name=F979_RS07035;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997254.1;old_locus_tag=F979_00577;product=glucose-6-phosphate isomerase;protein_id=WP_004735663.1;transl_table=11;translation=length.556
NZ_KB849308	GenBank	exon	15379	17049	.	+	1	Parent=F979_RS07035.t01
NZ_KB849308	GenBank	gene	17042	18061	.	+	1	ID=F979_RS07040;Name=galE;locus_tag=F979_RS07040;old_locus_tag=F979_00578
NZ_KB849308	GenBank	mRNA	17042	18061	.	+	1	ID=F979_RS07040.t01;Parent=F979_RS07040
NZ_KB849308	GenBank	CDS	17042	18061	.	+	1	ID=F979_RS07040.p01;Parent=F979_RS07040.t01;eC_number=5.1.3.2;Name=galE;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997255.1;locus_tag=F979_RS07040;old_locus_tag=F979_00578;product=UDP-glucose 4-epimerase GalE;protein_id=WP_004735665.1;transl_table=11;translation=length.339
NZ_KB849308	GenBank	exon	17042	18061	.	+	1	Parent=F979_RS07040.t01
NZ_KB849308	GenBank	gene	18377	20038	.	+	1	ID=F979_RS07045;Name=F979_RS07045;old_locus_tag=F979_00579
NZ_KB849308	GenBank	mRNA	18377	20038	.	+	1	ID=F979_RS07045.t01;Parent=F979_RS07045
NZ_KB849308	GenBank	CDS	18377	20038	.	+	1	ID=F979_RS07045.p01;Parent=F979_RS07045.t01;Name=F979_RS07045;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997257.1;old_locus_tag=F979_00579;product=LTA synthase family protein;protein_id=WP_114889769.1;transl_table=11;translation=length.553
NZ_KB849308	GenBank	exon	18377	20038	.	+	1	Parent=F979_RS07045.t01
NZ_KB849308	GenBank	gene	20065	21435	.	-	1	ID=F979_RS07050;Name=F979_RS07050;old_locus_tag=F979_00580
NZ_KB849308	GenBank	mRNA	20065	21435	.	-	1	ID=F979_RS07050.t01;Parent=F979_RS07050
NZ_KB849308	GenBank	CDS	20065	21435	.	-	1	ID=F979_RS07050.p01;Parent=F979_RS07050.t01;Name=F979_RS07050;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997258.1;old_locus_tag=F979_00580;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_000209962.1;transl_table=11;translation=length.456
NZ_KB849308	GenBank	exon	20065	21435	.	-	1	Parent=F979_RS07050.t01
NZ_KB849308	GenBank	gene	21815	23476	.	+	1	ID=F979_RS07055;Name=lldP;locus_tag=F979_RS07055;old_locus_tag=F979_00581
NZ_KB849308	GenBank	mRNA	21815	23476	.	+	1	ID=F979_RS07055.t01;Parent=F979_RS07055
NZ_KB849308	GenBank	CDS	21815	23476	.	+	1	ID=F979_RS07055.p01;Parent=F979_RS07055.t01;Name=lldP;Note=Derived by automated computational analysis using gene prediction method: Protein Homology.;codon_start=1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933682.1;locus_tag=F979_RS07055;old_locus_tag=F979_00581;product=L-lactate permease;protein_id=WP_000933687.1;transl_table=11;translation=length.553
NZ_KB849308	GenBank	exon	21815	23476	.	+	1	Parent=F979_RS07055.t01