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CAZyme Gene Cluster: NC_000913.3|CGC13

CGC gene composition diagram | Gene composition table | Substrate predicted by dbCAN-sub |  Substrate predicted by dbCAN-PUL search  |  Filtered homologs of dbCAN-PUL hits  

CGC gene composition diagram

Gene composition table

Protein ID Type Start End Strand Signature
NC_000913.3_659 CAZyme 701603 702751 - CE9_e0|CE9
NC_000913.3_660 null 702811 703611 -
NC_000913.3_661 TC 703944 705890 + 4.A.1.1.2
NC_000913.3_662 null 705860 705982 -
NC_000913.3_663 null 706093 707757 +
NC_000913.3_664 TC 708334 709740 + 1.B.25.1.13

Substrate predicted by best dbCAN-PUL hit is glycosaminoglycan download this fig


All filtered homologs of dbCAN-PUL hits

qseqid sseqid PULID pident length mismatch gapopen qstart qend sstart send evalue bitscore qlen slen
NC_000913.3_659|CAZyme|CE9_e0;CE9 PUL0579_2|CAZyme|CE9 PUL0579 61.968 376 140 1 1 376 1 373 1.07e-173 487.0 383 378
NC_000913.3_661|TC PUL0579_3|TC PUL0579 53.725 255 111 2 214 468 267 514 9.89e-80 260.0 649 523
NC_000913.3_661|TC PUL0579_3|TC PUL0579 52.970 202 95 0 1 202 1 202 1.83e-56 198.0 649 523