Seed protein information help
| APIS family ID | Druad1 | |||||||||||||
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| Inhibited defense system | Druantia type I | |||||||||||||
| CLAN ID | CLAN106 | |||||||||||||
| Seed protein property |
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| Phage property |
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| PMID/References | Ojima et al., 2024 | |||||||||||||
| PDB structures | ; | |||||||||||||
| Pfam domains | ||||||||||||||
| Phrog | phrog_4033,phrog_5183,phrog_10379,phrog_8014,phrog_3575 | |||||||||||||
| Host taxa | d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli | |||||||||||||
| Gene Location | Start: 51818; End: 51952; Strand: - | |||||||||||||
| Description | ORF71 exhibits anti-Druantia type I activity, was predicted to belong to a family of unknown function (DUF6614). | |||||||||||||
Seed genomic context Download table help
| Genome accession | Start | End | Strand | Protein ID | Length | Molecular weight | Charge | Isoelectric point | Function | Phrog | PFAM |
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Seed genomic context- JBrowse
Predicted 3D structure by alphafold2 with pTM = 0.18 Download help
pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .