CAZyme3D

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Entry ID

Information for CAZyme ID: VTS69635.1

Basic Information

GenBank IDVTS69635.1
FamilyGT35
Sequence Length752
UniProt IDA0A4V0BMI9(100,100)Download
Average pLDDT?96.65
CAZy50 ID6810
CAZy50 RepNo, CBK83088.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID113107
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus australis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLPLNEFVQK  RYNKTIAECS  NEELYLALLN  YSKLASSQKP  VNTGKKKVYY  ISAEFLIGKL60
LSNNLINLGL  YDDVKKELAD  AGKDLIEVEE  VELEPSLGNG  GLGRLAACFI  DSIATLGLNG120
DGVGLNYHYG  LFQQVLKNNQ  QETIPNAWLT  EQNWLVRSSR  SYQVPFAHFT  LTSTLYDIDV180
PGYKTATKNR  LRLFDLDSVD  SSIIEDGISF  DKTDIARNLT  LFLYPDDSDR  QGELLRIFQQ240
YFMVSNGAQL  IIDEAIEKGS  NLHDLADYAV  VQINDTHPSM  VIPELIRLLT  ARGIELDEAI300
SIVRSMTAYT  NHTILAEALE  KWPLEFLEEV  VPHLVPIIEE  LDRRVKAEYK  DPAVQIIDES360
GRVHMAHMDI  HYGYSVNGVA  ALHTEILKNS  ELKAFYDIYP  EKFNNKTNGI  TFRRWLMHAN420
PRLSHYLDEI  LGHGWHHEAD  ELEKLLSYED  KAVVKEKLES  IKAHNKRKLA  RHLKDHQGVE480
INPNSIFDIQ  IKRLHEYKRQ  QMNALYVIHK  YLDIKAGNIP  ARPITVFFGG  KAAPAYTIAQ540
DIIHLILCLS  EVIANDPAVA  PHLQVVMVEN  YNVTAASFLI  PACDISEQIS  LASKEASGTG600
NMKFMLNGAL  TLGTMDGANV  EIAELVGDEN  IYIFGEDSET  VIDLYAKAAY  KSSEFYAREA660
IKPLVDFIVS  DAVLAVGKKE  RLERLYNELI  NKDWFMTLLD  LEDYIKVKEQ  MLADYENRDA720
WLDKVIVNIA  KAGFFSSDRT  IAQYNEDIWH  LN752

Predicted 3D structure by AlphaFold2 with pLDDT = 96.65 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(78-751)

MLPLNEFVQK  RYNKTIAECS  NEELYLALLN  YSKLASSQKP  VNTGKKKVYY  ISAEFLIGKL60
LSNNLINLGL  YDDVKKELAD  AGKDLIEVEE  VELEPSLGNG  GLGRLAACFI  DSIATLGLNG120
DGVGLNYHYG  LFQQVLKNNQ  QETIPNAWLT  EQNWLVRSSR  SYQVPFAHFT  LTSTLYDIDV180
PGYKTATKNR  LRLFDLDSVD  SSIIEDGISF  DKTDIARNLT  LFLYPDDSDR  QGELLRIFQQ240
YFMVSNGAQL  IIDEAIEKGS  NLHDLADYAV  VQINDTHPSM  VIPELIRLLT  ARGIELDEAI300
SIVRSMTAYT  NHTILAEALE  KWPLEFLEEV  VPHLVPIIEE  LDRRVKAEYK  DPAVQIIDES360
GRVHMAHMDI  HYGYSVNGVA  ALHTEILKNS  ELKAFYDIYP  EKFNNKTNGI  TFRRWLMHAN420
PRLSHYLDEI  LGHGWHHEAD  ELEKLLSYED  KAVVKEKLES  IKAHNKRKLA  RHLKDHQGVE480
INPNSIFDIQ  IKRLHEYKRQ  QMNALYVIHK  YLDIKAGNIP  ARPITVFFGG  KAAPAYTIAQ540
DIIHLILCLS  EVIANDPAVA  PHLQVVMVEN  YNVTAASFLI  PACDISEQIS  LASKEASGTG600
NMKFMLNGAL  TLGTMDGANV  EIAELVGDEN  IYIFGEDSET  VIDLYAKAAY  KSSEFYAREA660
IKPLVDFIVS  DAVLAVGKKE  RLERLYNELI  NKDWFMTLLD  LEDYIKVKEQ  MLADYENRDA720
WLDKVIVNIA  KAGFFSSDRT  IAQYNEDIWH  LN752

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help