Information for CAZyme ID: VFB03094.1
Basic Information
| GenBank ID | VFB03094.1 |
| Family | GH2 |
| Sequence Length | 827 |
| UniProt ID | A0A4V6IDE3(100,100) |
| Average pLDDT? | 95.34 |
| CAZy50 ID | 24156 |
| CAZy50 Rep | No, SQG07967.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1141221 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium taihuense |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKKTLFFLFC LIQNIIIAQS SERNLSSEKW QFKNDKENKW LSASVPGMVH LDLMNNNIIP | 60 |
| DPFKDENEKK VQWIENEDWD YQTNFKVSAK ELNNQNIDLV FDGLDTFSEI YLNGKLLKET | 120 |
| DNMFRKWEIP VKTDLKVGEN LLQIKFKSAV SVGKDLAEKV SFTTPESPRS FVRKAQYQFG | 180 |
| WDWGPRLVTA GIWKDVKLNF WNTAKIEHLK IEQKVLTKQK AELQIRAEII AENEGNYSFI | 240 |
| TDLQNHKIFL RKGLNKISVP FTIENPHFWQ PNGWGKTMLY ALKFSLKKDG EIIDEKEERI | 300 |
| GLKTVELVQE KDEKGKSFYF KVNGNPLYAK GVNWIPGDSF SPRMSKEKYH KLIKDCKEAN | 360 |
| MNMIRVWGGG IYEDDEFYKA CDENGILVWQ DFMFAGSFYP ADENFQKNVE MEVKDQVERL | 420 |
| QNHPSLALWC GNNEIDEAIV NWGYQKQFKY SKEDSLQVWK DYKTIFHEVI PNVIKKYATA | 480 |
| DKQTYWESSP SIGWGHKESL TEGDSHYWGV WWGEEPFEIY NKKVPRFASE YGFQGMPTLE | 540 |
| TTKSMFSGKA DLRLENPTIK AHEKHSRGWE IIQKYMERDY KVPIDFVKYN YISQLLQARG | 600 |
| MQIAIEAHRR VKPYNMGTLY WQLNDCWPVV SWSSIDYLGN WKALHYQIKR SFENQVILAE | 660 |
| EKDGILNFYG INDSLKNFED VQLEFEVNNF KGENFLTAVS NQKKKIDQIV KFNSSPIAEL | 720 |
| TGDSDKNELY LHLILRGKDG KIIAESNYFF SKPKDLKLTK PNIQIKKISS TEIEISTDVL | 780 |
| AKDVYLIGDT HFSDNFFDLL PKTSRRIKLS KAIKNIEVMS LWDTISQ | 827 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.34 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(19-748)
| MKKTLFFLFC LIQNIIIAQS SERNLSSEKW QFKNDKENKW LSASVPGMVH LDLMNNNIIP | 60 |
| DPFKDENEKK VQWIENEDWD YQTNFKVSAK ELNNQNIDLV FDGLDTFSEI YLNGKLLKET | 120 |
| DNMFRKWEIP VKTDLKVGEN LLQIKFKSAV SVGKDLAEKV SFTTPESPRS FVRKAQYQFG | 180 |
| WDWGPRLVTA GIWKDVKLNF WNTAKIEHLK IEQKVLTKQK AELQIRAEII AENEGNYSFI | 240 |
| TDLQNHKIFL RKGLNKISVP FTIENPHFWQ PNGWGKTMLY ALKFSLKKDG EIIDEKEERI | 300 |
| GLKTVELVQE KDEKGKSFYF KVNGNPLYAK GVNWIPGDSF SPRMSKEKYH KLIKDCKEAN | 360 |
| MNMIRVWGGG IYEDDEFYKA CDENGILVWQ DFMFAGSFYP ADENFQKNVE MEVKDQVERL | 420 |
| QNHPSLALWC GNNEIDEAIV NWGYQKQFKY SKEDSLQVWK DYKTIFHEVI PNVIKKYATA | 480 |
| DKQTYWESSP SIGWGHKESL TEGDSHYWGV WWGEEPFEIY NKKVPRFASE YGFQGMPTLE | 540 |
| TTKSMFSGKA DLRLENPTIK AHEKHSRGWE IIQKYMERDY KVPIDFVKYN YISQLLQARG | 600 |
| MQIAIEAHRR VKPYNMGTLY WQLNDCWPVV SWSSIDYLGN WKALHYQIKR SFENQVILAE | 660 |
| EKDGILNFYG INDSLKNFED VQLEFEVNNF KGENFLTAVS NQKKKIDQIV KFNSSPIAEL | 720 |
| TGDSDKNELY LHLILRGKDG KIIAESNYFF SKPKDLKLTK PNIQIKKISS TEIEISTDVL | 780 |
| AKDVYLIGDT HFSDNFFDLL PKTSRRIKLS KAIKNIEVMS LWDTISQ | 827 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.