Information for CAZyme ID: VEH99729.1
Basic Information
GenBank ID | VEH99729.1 |
Family | CBM20, GH77 |
Sequence Length | 885 |
UniProt ID | A0A3S4UTJ5(100,100)![]() |
Average pLDDT? | 92.80 |
CAZy50 ID | 20302 |
CAZy50 Rep | No, QBO58273.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 266748 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Flavobacteriia |
Order | Flavobacteriales |
Family | Weeksellaceae |
Genus | Kaistella |
Species | Kaistella antarctica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKLYLNINFR TKVGENVQVC VFEDGTVEKV HALKYTDNGN WIAEVDYFSK SISYKYQLVN | 60 |
EQGFILDEEF SLHQLNFPHN YDEFVIHDFW NAKNFPENYL NNKILKNKLR GFKPEKVSVL | 120 |
KKHTHLFRLE APIYNPNWKM VVLGNCGALG NWQYLNTVPM SQTDFGIWEA AVELPNNQMI | 180 |
QYKYGLMKID SGEVFDVEYG DNRWALPNAE KNVLQIKADH FFKFKSFEMY HAAGVAVPVF | 240 |
ALRTENGFGV GEFPDLKNLA DWAAKTNLSV LQILPINDTT ANYTWTDSYP YAAISVYALH | 300 |
PQYLSIEKLE YSLSKDFLEE FNTEKAELND LSLIDYEKMI AGKWKYIKAI FETNKDQILK | 360 |
NRNFKKFIKE NEEWLLPYSA FCVLRDKYKT PNFNDWKTHK KYIAGKIAPF FTAKSKDYEM | 420 |
SMLHAWVQYQ LHLQLKDAID YTHDLGISVK GDLPIGIYRY SVEAWTEPEL FGMDFQAGAP | 480 |
PDQFTDLGQN WEFPTYNWEA MKEDGYRWWK NRFKALEQYF DAMRIDHILG FFRIWRMPMS | 540 |
STQGILGYFY PAIPVRLEEF EARGIYFDND RYCKPFINDQ ILWDYFGEER DTIHNQFMNN | 600 |
HFDGTYSFKE EFDTQRKLAD YFKANPQGWA EDKLISLAAN VLFLEEEVAG EDSVYHPRFN | 660 |
IEKTDSYRYL NEDEKRKLSE LYVDYFFKRQ DGLWYQKAME KLPVILNATD MLICGEDLGL | 720 |
VPESVPQVMD RLGITALKVQ RMPSDNIAWY DPKHAGYMNV VTASSHDSST LRQWWHEDRD | 780 |
VSYRYFQQQL GQSGTAPWDL EPQLAEMIMK QHLYNDAMLA IFPIQEFLAT DRELTNPNMD | 840 |
DERINNPAEF PHYWRYRMHL NVEELLNHEE FNQKIAHWVS DSNRI | 885 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.80 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM20(135-209)+GH77(237-877)
MKLYLNINFR TKVGENVQVC VFEDGTVEKV HALKYTDNGN WIAEVDYFSK SISYKYQLVN | 60 |
EQGFILDEEF SLHQLNFPHN YDEFVIHDFW NAKNFPENYL NNKILKNKLR GFKPEKVSVL | 120 |
KKHTHLFRLE APIYNPNWKM VVLGNCGALG NWQYLNTVPM SQTDFGIWEA AVELPNNQMI | 180 |
QYKYGLMKID SGEVFDVEYG DNRWALPNAE KNVLQIKADH FFKFKSFEMY HAAGVAVPVF | 240 |
ALRTENGFGV GEFPDLKNLA DWAAKTNLSV LQILPINDTT ANYTWTDSYP YAAISVYALH | 300 |
PQYLSIEKLE YSLSKDFLEE FNTEKAELND LSLIDYEKMI AGKWKYIKAI FETNKDQILK | 360 |
NRNFKKFIKE NEEWLLPYSA FCVLRDKYKT PNFNDWKTHK KYIAGKIAPF FTAKSKDYEM | 420 |
SMLHAWVQYQ LHLQLKDAID YTHDLGISVK GDLPIGIYRY SVEAWTEPEL FGMDFQAGAP | 480 |
PDQFTDLGQN WEFPTYNWEA MKEDGYRWWK NRFKALEQYF DAMRIDHILG FFRIWRMPMS | 540 |
STQGILGYFY PAIPVRLEEF EARGIYFDND RYCKPFINDQ ILWDYFGEER DTIHNQFMNN | 600 |
HFDGTYSFKE EFDTQRKLAD YFKANPQGWA EDKLISLAAN VLFLEEEVAG EDSVYHPRFN | 660 |
IEKTDSYRYL NEDEKRKLSE LYVDYFFKRQ DGLWYQKAME KLPVILNATD MLICGEDLGL | 720 |
VPESVPQVMD RLGITALKVQ RMPSDNIAWY DPKHAGYMNV VTASSHDSST LRQWWHEDRD | 780 |
VSYRYFQQQL GQSGTAPWDL EPQLAEMIMK QHLYNDAMLA IFPIQEFLAT DRELTNPNMD | 840 |
DERINNPAEF PHYWRYRMHL NVEELLNHEE FNQKIAHWVS DSNRI | 885 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.