Information for CAZyme ID: VEG58363.1
Basic Information
| GenBank ID | VEG58363.1 |
| Family | GT53 |
| Sequence Length | 1085 |
| UniProt ID | A0A3S4SQU0(100,100) |
| Average pLDDT? | 93.68 |
| CAZy50 ID | 1520 |
| CAZy50 Rep | No, AFE18574.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1791 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycolicibacterium |
| Species | Mycolicibacterium aurum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPAPSARLLA VIAGLAGVVL CGLAPLLPVK QSTAAIAWPQ GANADGFVSD ITAPLVSGAP | 60 |
| RSLDVTIPCT TMATLPADGG VVFSTIPADG IDAGRNGLFV RANADVVYVA FRDTVAAVAP | 120 |
| RDAVDSGACS ELRIWANVGA VGADFVGIPG ATGTLPPDKR PQVAGVFTDL EVAPDAAGLA | 180 |
| ARIDVDTRFI TTPTALKLGV MVLGVLCVIA SIVALSLLDR SSGRRIPDEL RRPRRAGLWT | 240 |
| WLTDVAVVGG LLVWHIVGAQ SSDDGYNVTI ARVSGEAGYL TNYYRYFGAS EAPFDWYQSV | 300 |
| LAHLASVSTA GVWMRLPATV AAIATWLIIS HCVLPRLGRR LAGNRVAVLT AGAVFLAAWL | 360 |
| PFNNGLRPEP LIAFGVVAAW MLVENTIGTR RLWPYAVAIV VAVFSVTLAP QGLVAVAPLL | 420 |
| VGARAVTRII ASRRPVDGLL APLATLLASA SLLFVVVFRD QTLATVAESV RIKYVVGPTV | 480 |
| PWYQEFLRYY YLTVEESVDG SLTRRFSVLI LLLCLFGLIT VLLRRGSVPG AVNGPVWRLV | 540 |
| GTTGIGLLLL TLTPTKWAVQ FGAFAGLAGA LGAVTAFAFA RVGLHSRRNL ALYVTALLFV | 600 |
| LAWATSGING WFYVANYGVP WFDKQPVILG YPVTTIFLVL AIACGLLAAW LHFRIDYAGH | 660 |
| TEVADTGRNR AVASSPLLVV AVIMVVLELG SMLKATVGRY PVYTTGAANI AALSGDSCAM | 720 |
| ADDVLVEADT NAGMLQPVPG QRFGEYGPLG GEDPVGFTPN GISDTLEPAE PVAANPGTVN | 780 |
| SDGPVDKPNI GVGYAAGTGG GYGPEGVNGS NVFLPFGLDP ATTPVMGSFV EPGSDQASVA | 840 |
| AEATSAWYQL PPRTPDRPLV TVAAAGAIWY YNEDGSFNYG QSLKLQWGVH RPDGSYQELG | 900 |
| EVQPIDIFVQ KAWRNLRFPL EWAPPEANVA RIVADDPNLS EDQWFGFTPP RVPVLQTASE | 960 |
| FLGTQTPVLM DIATAANFPC QRPFSEHLGI AELPEYRIMP NFKQIVVSSN QWQAAQDGGP | 1020 |
| FLFIQALLRT ESIPSYLSGD WYRDWGSLER YNRVVPRDEA PDAAIEEGST QVFGWNRGGP | 1080 |
| IRALP | 1085 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.68 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT53(6-1082)
| MPAPSARLLA VIAGLAGVVL CGLAPLLPVK QSTAAIAWPQ GANADGFVSD ITAPLVSGAP | 60 |
| RSLDVTIPCT TMATLPADGG VVFSTIPADG IDAGRNGLFV RANADVVYVA FRDTVAAVAP | 120 |
| RDAVDSGACS ELRIWANVGA VGADFVGIPG ATGTLPPDKR PQVAGVFTDL EVAPDAAGLA | 180 |
| ARIDVDTRFI TTPTALKLGV MVLGVLCVIA SIVALSLLDR SSGRRIPDEL RRPRRAGLWT | 240 |
| WLTDVAVVGG LLVWHIVGAQ SSDDGYNVTI ARVSGEAGYL TNYYRYFGAS EAPFDWYQSV | 300 |
| LAHLASVSTA GVWMRLPATV AAIATWLIIS HCVLPRLGRR LAGNRVAVLT AGAVFLAAWL | 360 |
| PFNNGLRPEP LIAFGVVAAW MLVENTIGTR RLWPYAVAIV VAVFSVTLAP QGLVAVAPLL | 420 |
| VGARAVTRII ASRRPVDGLL APLATLLASA SLLFVVVFRD QTLATVAESV RIKYVVGPTV | 480 |
| PWYQEFLRYY YLTVEESVDG SLTRRFSVLI LLLCLFGLIT VLLRRGSVPG AVNGPVWRLV | 540 |
| GTTGIGLLLL TLTPTKWAVQ FGAFAGLAGA LGAVTAFAFA RVGLHSRRNL ALYVTALLFV | 600 |
| LAWATSGING WFYVANYGVP WFDKQPVILG YPVTTIFLVL AIACGLLAAW LHFRIDYAGH | 660 |
| TEVADTGRNR AVASSPLLVV AVIMVVLELG SMLKATVGRY PVYTTGAANI AALSGDSCAM | 720 |
| ADDVLVEADT NAGMLQPVPG QRFGEYGPLG GEDPVGFTPN GISDTLEPAE PVAANPGTVN | 780 |
| SDGPVDKPNI GVGYAAGTGG GYGPEGVNGS NVFLPFGLDP ATTPVMGSFV EPGSDQASVA | 840 |
| AEATSAWYQL PPRTPDRPLV TVAAAGAIWY YNEDGSFNYG QSLKLQWGVH RPDGSYQELG | 900 |
| EVQPIDIFVQ KAWRNLRFPL EWAPPEANVA RIVADDPNLS EDQWFGFTPP RVPVLQTASE | 960 |
| FLGTQTPVLM DIATAANFPC QRPFSEHLGI AELPEYRIMP NFKQIVVSSN QWQAAQDGGP | 1020 |
| FLFIQALLRT ESIPSYLSGD WYRDWGSLER YNRVVPRDEA PDAAIEEGST QVFGWNRGGP | 1080 |
| IRALP | 1085 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.