Information for CAZyme ID: VED63619.1
Basic Information
| GenBank ID | VED63619.1 |
| Family | GT0 |
| Sequence Length | 774 |
| UniProt ID | A0A3S4KYI7(100,100) |
| Average pLDDT? | 87.91 |
| CAZy50 ID | 29690 |
| CAZy50 Rep | No, QLK85478.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 53344 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Staphylococcaceae |
| Genus | Staphylococcus |
| Species | Staphylococcus delphini |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MHIKILGYNI FQKGGTTRSN LNLIQSFLRA GHQVTYVNYM HFRQRQVTQL KAEEGQAIEG | 60 |
| AQFIAFRGVQ TLAQADLLIL TREDFFKFAR EVKHRTPEMR ILGEIHSPLA YLNPQMDLAL | 120 |
| EAIDAVRVST PKIAEAFQER YDYPYVFPMY VNHQHVQFQA QPVHQTHNLL MKARFEDEIK | 180 |
| DISYVLKLMR YFVHTQGETR IHLYLQGYGP SLELYENLVV AYHLEDYVHI NGPEPTDYIY | 240 |
| VSTSPYETFG YSILEAMAQG NRVCLYPGED GVLKDIYAPF HAVTWLTKSL ESDAAKIVEM | 300 |
| VNGTYTDAER EADVETFHTQ LAQGHDTEAL IAQTKAMAAT HTIDVAQIAK PKMKASYQYV | 360 |
| QNTAKRVAVK VKETAEQAPK SPFRKGSRLY QLTRKGLFNV EAQVKKFQNQ RRHVSDQAVF | 420 |
| IESFHGKNFS GDPKAIACAM QRLYPELTIY VSAADPLVEM EIRSYDMTPV RFGTRAYMRA | 480 |
| FERCRYAVIN GNLWDRLVKH PDQQVIQTWH GFPLKRMVND LVDAVERQKQ AQQFAPRMQK | 540 |
| WDVLLSTSER YETYIRSAFR LDTHPNLTIL RDGAPRNSLL IRHQNDEAKW LEIQEKYFFQ | 600 |
| RDASKKYILF CPTWRKNARE SVSELDIVAL LERLPSSYEM IVKLHPNEGH LRERYQNLHP | 660 |
| RVHCFFNEMV DIQELYLISE ILISDYSSAM FDYAHLNRPI LILDEDTVDY QQDVGFYFDM | 720 |
| TEFPSIQKVA PDVETIQQYI ETTPSVDHQK VIAQFMTYDQ SDSDEQVVRS IFAR | 774 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.91 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT4(165-263)
| MHIKILGYNI FQKGGTTRSN LNLIQSFLRA GHQVTYVNYM HFRQRQVTQL KAEEGQAIEG | 60 |
| AQFIAFRGVQ TLAQADLLIL TREDFFKFAR EVKHRTPEMR ILGEIHSPLA YLNPQMDLAL | 120 |
| EAIDAVRVST PKIAEAFQER YDYPYVFPMY VNHQHVQFQA QPVHQTHNLL MKARFEDEIK | 180 |
| DISYVLKLMR YFVHTQGETR IHLYLQGYGP SLELYENLVV AYHLEDYVHI NGPEPTDYIY | 240 |
| VSTSPYETFG YSILEAMAQG NRVCLYPGED GVLKDIYAPF HAVTWLTKSL ESDAAKIVEM | 300 |
| VNGTYTDAER EADVETFHTQ LAQGHDTEAL IAQTKAMAAT HTIDVAQIAK PKMKASYQYV | 360 |
| QNTAKRVAVK VKETAEQAPK SPFRKGSRLY QLTRKGLFNV EAQVKKFQNQ RRHVSDQAVF | 420 |
| IESFHGKNFS GDPKAIACAM QRLYPELTIY VSAADPLVEM EIRSYDMTPV RFGTRAYMRA | 480 |
| FERCRYAVIN GNLWDRLVKH PDQQVIQTWH GFPLKRMVND LVDAVERQKQ AQQFAPRMQK | 540 |
| WDVLLSTSER YETYIRSAFR LDTHPNLTIL RDGAPRNSLL IRHQNDEAKW LEIQEKYFFQ | 600 |
| RDASKKYILF CPTWRKNARE SVSELDIVAL LERLPSSYEM IVKLHPNEGH LRERYQNLHP | 660 |
| RVHCFFNEMV DIQELYLISE ILISDYSSAM FDYAHLNRPI LILDEDTVDY QQDVGFYFDM | 720 |
| TEFPSIQKVA PDVETIQQYI ETTPSVDHQK VIAQFMTYDQ SDSDEQVVRS IFAR | 774 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.