CAZyme3D

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Entry ID

Information for CAZyme ID: SVE93023.1

Basic Information

GenBank IDSVE93023.1
FamilyGT13
Sequence Length457
UniProt IDA0A4Y7NJF9(100,100)Download
Average pLDDT?87.18
CAZy50 ID75295
CAZy50 RepNo, SVE94248.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID675436
KingdomEukaryota
PhylumArthropoda
ClassBranchiopoda
OrderDiplostraca
FamilyMoinidae
GenusMoina
SpeciesMoina brachiata

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKYKRLGLIV  AFCFASWLLF  SLVVFNENPP  RKAESQEKKG  SLLKYIEELE  SDISHQRNLH60
KVLVENLDRL  RKNPKSPPEK  VEDLKNVLAN  LGKLKPQNVV  LKTPAEKLSQ  TGKPVLPILV120
FSCNRPDVRR  NLDGLLKYRP  DPEQFPIIVS  QDCAHSTTAE  IIRSYGSQVT  HIQHPDQSEP180
DVPPGELKFK  GYFKISRHYR  WALHQIFRRF  NHTAVIIVED  DLDIAPDFYS  YFSTTYDLLL240
KDPTIWCISA  WNDNGKASLV  DMSQGSDILY  RSDFFPGLGW  MITKDLWDEL  EPKWPKSYWD300
DWMRRPEQRK  ERACIRPEIS  RTRTFGKIGV  SNGLFFDKHL  KYIKLNENPI  DFSSRNLSYL360
IQSQYDKQFV  QMVYSLPVVT  ATDVRTNFNL  PDSGAVRITY  HTKDAYKSAV  KLLGLMDDFK420
SGVPRTGYRG  IVSFFYKGRR  VYLAPNANWK  GYDLTWS457

Predicted 3D structure by AlphaFold2 with pLDDT = 87.18 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT13(30-450)

MKYKRLGLIV  AFCFASWLLF  SLVVFNENPP  RKAESQEKKG  SLLKYIEELE  SDISHQRNLH60
KVLVENLDRL  RKNPKSPPEK  VEDLKNVLAN  LGKLKPQNVV  LKTPAEKLSQ  TGKPVLPILV120
FSCNRPDVRR  NLDGLLKYRP  DPEQFPIIVS  QDCAHSTTAE  IIRSYGSQVT  HIQHPDQSEP180
DVPPGELKFK  GYFKISRHYR  WALHQIFRRF  NHTAVIIVED  DLDIAPDFYS  YFSTTYDLLL240
KDPTIWCISA  WNDNGKASLV  DMSQGSDILY  RSDFFPGLGW  MITKDLWDEL  EPKWPKSYWD300
DWMRRPEQRK  ERACIRPEIS  RTRTFGKIGV  SNGLFFDKHL  KYIKLNENPI  DFSSRNLSYL360
IQSQYDKQFV  QMVYSLPVVT  ATDVRTNFNL  PDSGAVRITY  HTKDAYKSAV  KLLGLMDDFK420
SGVPRTGYRG  IVSFFYKGRR  VYLAPNANWK  GYDLTWS457

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help