CAZyme3D

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Entry ID

Information for CAZyme ID: SPJ31567.1

Basic Information

GenBank IDSPJ31567.1
FamilyGT2
Sequence Length269
UniProt IDA0A2P9HA29(100,100)Download
Average pLDDT?93.60
CAZy50 ID160224
CAZy50 RepNo, CUI15722.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID264201
KingdomBacteria
PhylumChlamydiota
ClassChlamydiia
OrderParachlamydiales
FamilyParachlamydiaceae
GenusCandidatus Protochlamydia
SpeciesCandidatus Protochlamydia amoebophila

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTSSFPISVT  ILTKNSQKYL  REVLQALEDF  DEVVICDTGS  QDETVSLAKQ  FTNVAIYHEP60
FKGFGPTHNT  ASNLAKNDWI  LSIDSDEVVT  RELAIEISEL  QLKSKHVYSF  PRRNEYRGKW120
IKGCGWSPDR  QIRLYNKQET  HFTNVQVHEA  IIATELTHVH  LQSPLKHYSY  DQISDFLSKM180
QSYSTLFAEQ  YKGRKSSSFV  KALSHGLFSF  FKSYIIKRGF  LDGQEGFEIS  FYNGSTAFYK240
YLKLAEINRY  LKKEGSEKCD  GDLKKKLSA269

Predicted 3D structure by AlphaFold2 with pLDDT = 93.60 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(8-99)

MTSSFPISVT  ILTKNSQKYL  REVLQALEDF  DEVVICDTGS  QDETVSLAKQ  FTNVAIYHEP60
FKGFGPTHNT  ASNLAKNDWI  LSIDSDEVVT  RELAIEISEL  QLKSKHVYSF  PRRNEYRGKW120
IKGCGWSPDR  QIRLYNKQET  HFTNVQVHEA  IIATELTHVH  LQSPLKHYSY  DQISDFLSKM180
QSYSTLFAEQ  YKGRKSSSFV  KALSHGLFSF  FKSYIIKRGF  LDGQEGFEIS  FYNGSTAFYK240
YLKLAEINRY  LKKEGSEKCD  GDLKKKLSA269

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help