CAZyme3D

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Entry ID

Information for CAZyme ID: SMR55494.1

Basic Information

GenBank IDSMR55494.1
FamilyGT34
Sequence Length621
UniProt IDA0A2H1GPH2(100,100)Download
Average pLDDT?73.17
CAZy50 ID40525
CAZy50 RepNo, UJO16290.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1276532
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
OrderMycosphaerellales
FamilyMycosphaerellaceae
GenusZymoseptoria
SpeciesZymoseptoria tritici

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGWMLTTALG  PAAHDVTAAD  MLSYDVASSA  ISNSPASYGE  LRSRPQMQPG  ILGEDAPEDE60
LGLPPGSTNA  KEPSVTGALA  ELHHAVKGKL  QTWSPYYIKP  LPVPGNALNR  TGSDGSGVLN120
TTAPDLTGEA  VTDGISEDAM  LGAKTRIGKC  TILFNGNSYW  ERAIRTHERH  DREHGYRLHV180
LRQHLMDDVW  SKPAYILSLL  LRELSKPESE  RLEWLFWVDA  DTIILNPYIP  IDVFLPPAGS240
QFEDVHLMYS  NDWNGLNNGV  FPVRVNQWSV  KLFSAITSFR  HYRPDADLVF  RDQSAMDMLM300
KEPEFANNIV  QAPQRWFNAY  QGEHNETLAP  FQIRRGDILV  HFAGVPNREE  RMGYWLDRAE360
QHLDDWEVPV  KSTSYMQEVK  DFWIQQANTR  RDKQQLVAEQ  VSISREMFDK  ITKALADYGD420
RLEEETKVEL  KEKHEALRSR  LESVEASADV  EKMREAVQGL  ELAAAPLKEV  IDQAQKVMLT480
SAHEAIFGGE  KDLLEGGFNN  GVSTPELARI  SETIKHLKEL  VMVPQEHWDR  QQIAGATNDV540
TSARAARQEA  AAQVAPDSVP  GKAAGGAAAP  IVNATGPPQQ  VPTDTGGVMD  ASDALDAAMV600
KPVSVSSDTS  PQALETSSAA  E621

Predicted 3D structure by AlphaFold2 with pLDDT = 73.17 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT34(156-349)

MGWMLTTALG  PAAHDVTAAD  MLSYDVASSA  ISNSPASYGE  LRSRPQMQPG  ILGEDAPEDE60
LGLPPGSTNA  KEPSVTGALA  ELHHAVKGKL  QTWSPYYIKP  LPVPGNALNR  TGSDGSGVLN120
TTAPDLTGEA  VTDGISEDAM  LGAKTRIGKC  TILFNGNSYW  ERAIRTHERH  DREHGYRLHV180
LRQHLMDDVW  SKPAYILSLL  LRELSKPESE  RLEWLFWVDA  DTIILNPYIP  IDVFLPPAGS240
QFEDVHLMYS  NDWNGLNNGV  FPVRVNQWSV  KLFSAITSFR  HYRPDADLVF  RDQSAMDMLM300
KEPEFANNIV  QAPQRWFNAY  QGEHNETLAP  FQIRRGDILV  HFAGVPNREE  RMGYWLDRAE360
QHLDDWEVPV  KSTSYMQEVK  DFWIQQANTR  RDKQQLVAEQ  VSISREMFDK  ITKALADYGD420
RLEEETKVEL  KEKHEALRSR  LESVEASADV  EKMREAVQGL  ELAAAPLKEV  IDQAQKVMLT480
SAHEAIFGGE  KDLLEGGFNN  GVSTPELARI  SETIKHLKEL  VMVPQEHWDR  QQIAGATNDV540
TSARAARQEA  AAQVAPDSVP  GKAAGGAAAP  IVNATGPPQQ  VPTDTGGVMD  ASDALDAAMV600
KPVSVSSDTS  PQALETSSAA  E621

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help