CAZyme3D

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Entry ID

Information for CAZyme ID: SMR53556.1

Basic Information

GenBank IDSMR53556.1
FamilyAA3_2
Sequence Length603
UniProt IDA0A2H1GIZ5(100,100)Download
Average pLDDT?88.94
CAZy50 ID49131
CAZy50 RepNo, SMQ51478.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1276532
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
OrderMycosphaerellales
FamilyMycosphaerellaceae
GenusZymoseptoria
SpeciesZymoseptoria tritici

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPGATKSTNG  VNGHSESALC  SVDEFVSDEY  DYLVVGGGTA  GLCVAARLTE  NPDVKVYPTL60
IGREKYDFCY  VSEEVPTAGN  KKYSMPRGRM  LGGSSGLNYL  MYVRGSKGDY  DGWASLGNEG120
WGWDDMVPYF  KKHQTLDPSE  KEPPSAQYMP  TGAKEKYHGT  DGPIHTSFND  YYEPFEYDFC180
EACYEVGGAE  RTLHDAWSGD  HMGFYSSLAA  VNRSDDPGKR  SYSATGYLRP  NLGRKNLKVL240
TEAHASRVLL  EGNTATGVEF  IHNGKKLQVK  ASREVIVSGG  TIASPQLLEL  SGIGNREVLA300
AAGVKCLIEN  ERVGFNFQDH  VLGGMLYDLK  DGLKSLDAMH  GVEYQQQMQA  MYEKTNNGPL360
GSAGMLMGFV  SYASLVDKET  LDATISEIRK  NSLAKTDFEK  RQEDVIVRQL  SDPNFANIQT420
FCVGAQLDVS  KGHDQIEFFA  APPEGKNRVS  LLICLEHPLS  RGTVHVKSSN  PLDHPVIDPG480
YFRNPADAKI  MAEGIKWMDK  VAARPVLAKS  LADRILPPKG  ASIESEEERV  EFVKNHVSTQ540
YHLIGTCTMG  EVVDDKLKVK  GVNGLRVIDA  SVFAGHVSGN  IMSTTYAVAE  KGADLVKADD600
GRY603

Predicted 3D structure by AlphaFold2 with pLDDT = 88.94 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA3_2(29-599)

MPGATKSTNG  VNGHSESALC  SVDEFVSDEY  DYLVVGGGTA  GLCVAARLTE  NPDVKVYPTL60
IGREKYDFCY  VSEEVPTAGN  KKYSMPRGRM  LGGSSGLNYL  MYVRGSKGDY  DGWASLGNEG120
WGWDDMVPYF  KKHQTLDPSE  KEPPSAQYMP  TGAKEKYHGT  DGPIHTSFND  YYEPFEYDFC180
EACYEVGGAE  RTLHDAWSGD  HMGFYSSLAA  VNRSDDPGKR  SYSATGYLRP  NLGRKNLKVL240
TEAHASRVLL  EGNTATGVEF  IHNGKKLQVK  ASREVIVSGG  TIASPQLLEL  SGIGNREVLA300
AAGVKCLIEN  ERVGFNFQDH  VLGGMLYDLK  DGLKSLDAMH  GVEYQQQMQA  MYEKTNNGPL360
GSAGMLMGFV  SYASLVDKET  LDATISEIRK  NSLAKTDFEK  RQEDVIVRQL  SDPNFANIQT420
FCVGAQLDVS  KGHDQIEFFA  APPEGKNRVS  LLICLEHPLS  RGTVHVKSSN  PLDHPVIDPG480
YFRNPADAKI  MAEGIKWMDK  VAARPVLAKS  LADRILPPKG  ASIESEEERV  EFVKNHVSTQ540
YHLIGTCTMG  EVVDDKLKVK  GVNGLRVIDA  SVFAGHVSGN  IMSTTYAVAE  KGADLVKADD600
GRY603

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help