CAZyme3D

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Entry ID

Information for CAZyme ID: SMR43150.1

Basic Information

GenBank IDSMR43150.1
FamilyCBM18, CBM50, GH18
Sequence Length683
UniProt IDA0A2H1FP97(100,100)Download
Average pLDDT?83.64
CAZy50 ID40719
CAZy50 RepNo, SMR45312.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1276532
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
OrderMycosphaerellales
FamilyMycosphaerellaceae
GenusZymoseptoria
SpeciesZymoseptoria tritici

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MASNRGTGIC  TILFVLFTLS  QTVMGTWFDN  HMKHKDTPLV  ARQLNGSVGE  LGECPYLSVV60
AGDTCISLAD  KCGNLTISDF  QSYNGAGNAP  DYNATFCGAL  DVNQVVCCGA  GNYPDFTPKP120
NPDGTCIEWT  VKANDTCTDV  GILYNTTVEA  IERVNANKTW  GFGGCYFLLP  GQKICLSEGT180
PPFPAPVDNA  QCGPQIEGTA  ATTNITGWAD  LNPCPNKACC  NKWAQCGITG  DFCIPERAYT240
GAPGSAPPGK  NGCISNCGME  IISSPEPPAV  FEKIGYFETW  NQERPGLHMW  PRDINSNGSY300
QYTMVHYAFM  NIIEGYEISA  APYEDNWNEF  LNTTGFKKIV  TFGGWAFSTE  NFTYNVFRDG360
VTTADRQKFA  QNVARFVIDN  KLDGVDFDWE  YPGAPDIPGI  PPASPENGRD  YLEFLKIVRQ420
LLPAPYTVSI  AIPASYWYLK  GFPIEEMAPV  LDYMVAMTYD  LHGQWDYGNN  YSQPGCPTGD480
CLRSHVNQTE  TEQALSMITK  AGVPSNKVIF  GQALYGRSFR  MTTPGCYTSQ  CKYTGPESGA540
AKGVYTGTSG  YISNYEIRQI  IANGTRAGAL  EGRQIGETPS  TYYNVQEYYS  PDMGNVLVYN600
DVEWVSWTDD  TTYNNRTEWV  RALNFGGIVD  WAMDLNATYP  DRAVAAPSAS  ATPSVRVVTV660
SVANNVCAPT  YSAGGLGTMS  MSM683

Predicted 3D structure by AlphaFold2 with pLDDT = 83.64 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM18(210-257)+GH18(274-638)

MASNRGTGIC  TILFVLFTLS  QTVMGTWFDN  HMKHKDTPLV  ARQLNGSVGE  LGECPYLSVV60
AGDTCISLAD  KCGNLTISDF  QSYNGAGNAP  DYNATFCGAL  DVNQVVCCGA  GNYPDFTPKP120
NPDGTCIEWT  VKANDTCTDV  GILYNTTVEA  IERVNANKTW  GFGGCYFLLP  GQKICLSEGT180
PPFPAPVDNA  QCGPQIEGTA  ATTNITGWAD  LNPCPNKACC  NKWAQCGITG  DFCIPERAYT240
GAPGSAPPGK  NGCISNCGME  IISSPEPPAV  FEKIGYFETW  NQERPGLHMW  PRDINSNGSY300
QYTMVHYAFM  NIIEGYEISA  APYEDNWNEF  LNTTGFKKIV  TFGGWAFSTE  NFTYNVFRDG360
VTTADRQKFA  QNVARFVIDN  KLDGVDFDWE  YPGAPDIPGI  PPASPENGRD  YLEFLKIVRQ420
LLPAPYTVSI  AIPASYWYLK  GFPIEEMAPV  LDYMVAMTYD  LHGQWDYGNN  YSQPGCPTGD480
CLRSHVNQTE  TEQALSMITK  AGVPSNKVIF  GQALYGRSFR  MTTPGCYTSQ  CKYTGPESGA540
AKGVYTGTSG  YISNYEIRQI  IANGTRAGAL  EGRQIGETPS  TYYNVQEYYS  PDMGNVLVYN600
DVEWVSWTDD  TTYNNRTEWV  RALNFGGIVD  WAMDLNATYP  DRAVAAPSAS  ATPSVRVVTV660
SVANNVCAPT  YSAGGLGTMS  MSM683

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help