CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: SJK85401.1

Basic Information

GenBank IDSJK85401.1
FamilyGH13_20
Sequence Length616
UniProt IDA0A1R4A8V9(100,100)Download
Average pLDDT?91.64
CAZy50 ID50109
CAZy50 RepNo, SIM79844.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1673428
KingdomArchaea
PhylumCandidatus Thermoplasmatota
ClassThermoplasmata
OrderThermoplasmatales
FamilyCuniculiplasmataceae
GenusCuniculiplasma
SpeciesCuniculiplasma divulgatum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSESGIHKQI  LFSLPFEEGD  ESCYLKGSFN  CNGDGSVELL  KTDDSRNWEV  TLKLLPGTYN60
YFYSVNQYNL  FNEQRERIKK  PMTLHVKQEY  FFHDPDSTRF  FSRNGGFFVI  RCITPPDVKN120
VRIEQAGSRK  KKNDFKFRSR  DYNLFEFISR  SDGKYIFYDN  HGNRYGPFTP  PARDEAKKSS180
NIIYQIFPDR  FNRKGSPDAE  FTKWGEPPER  NSFFGGNVEG  IIEKIPYLAD  LGVDHLYLTP240
FYSSRSNHRY  DIDDYFSVDR  RFGTLDQLTT  LSKKLQEDKI  SMILDMVFNH  TSIYFPQFVR300
ELREKLPHDQ  SWYKFIKDTN  EGMRKRWPVK  DGKTDAFYES  FLDNGGMPKL  NHRNESVKKF360
MLDVMDFYAE  RLNVSFLRYD  VADSINLNSI  GDIFRKFREK  FPEIGHIAEV  WCVSDIFFRK420
GLYTSSMNYG  LRNLIISLMN  KEIGPNRMNS  ELLNMRFILG  DDVYGKMMNI  IDSHDTPRIR480
TILGSEKLAM  AAYGIIMIMD  GMPSIYYGDE  LSMEGGPDPD  CRRTMEWEKV  GSEFYLKFRE540
LVKIRKENPA  AYNGIIRFSR  DKKGLINITK  YSIDQKIEMN  LNLGDSEIKT  KEKKSLNSID600
EKSATIGPEE  FSIHVY616

Predicted 3D structure by AlphaFold2 with pLDDT = 91.64 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH13_20(216-519)

MSESGIHKQI  LFSLPFEEGD  ESCYLKGSFN  CNGDGSVELL  KTDDSRNWEV  TLKLLPGTYN60
YFYSVNQYNL  FNEQRERIKK  PMTLHVKQEY  FFHDPDSTRF  FSRNGGFFVI  RCITPPDVKN120
VRIEQAGSRK  KKNDFKFRSR  DYNLFEFISR  SDGKYIFYDN  HGNRYGPFTP  PARDEAKKSS180
NIIYQIFPDR  FNRKGSPDAE  FTKWGEPPER  NSFFGGNVEG  IIEKIPYLAD  LGVDHLYLTP240
FYSSRSNHRY  DIDDYFSVDR  RFGTLDQLTT  LSKKLQEDKI  SMILDMVFNH  TSIYFPQFVR300
ELREKLPHDQ  SWYKFIKDTN  EGMRKRWPVK  DGKTDAFYES  FLDNGGMPKL  NHRNESVKKF360
MLDVMDFYAE  RLNVSFLRYD  VADSINLNSI  GDIFRKFREK  FPEIGHIAEV  WCVSDIFFRK420
GLYTSSMNYG  LRNLIISLMN  KEIGPNRMNS  ELLNMRFILG  DDVYGKMMNI  IDSHDTPRIR480
TILGSEKLAM  AAYGIIMIMD  GMPSIYYGDE  LSMEGGPDPD  CRRTMEWEKV  GSEFYLKFRE540
LVKIRKENPA  AYNGIIRFSR  DKKGLINITK  YSIDQKIEMN  LNLGDSEIKT  KEKKSLNSID600
EKSATIGPEE  FSIHVY616

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help