CAZyme3D

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Entry ID

Information for CAZyme ID: SHH37667.1

Basic Information

GenBank IDSHH37667.1
FamilyGH36
Sequence Length732
UniProt IDA0A1M5SGE4(100,100)Download
Average pLDDT?91.86
CAZy50 ID31718
CAZy50 RepNo, QLH21615.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1882757
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. 3214.6

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTEESPTIRW  GHDALHLEIG  TDPDGPPRLR  RFGVPGQLPA  EPPAAAPLPL  VEATTTNHGH60
HWSGHRVIDT  VIGADLRYRG  HTAARDGAWH  RLTVQLHDPA  GGLAAEVVLS  SPDGVPALRS120
QVVIRNESTR  SLRLESVTSL  VLGGLTADAD  LEAADLLWAE  NDWLAEYRWQ  RRPMRLSSPV180
LSGRVHYRYG  KGGFAVAGQG  TWSSCDRLPM  GGLTDRRTGR  TWVWQIEHNG  GGWHWECGEH240
DDSAYLALSG  PSAGRHGWSR  LLEPGASFET  VPVAIAFGVE  GPDEAFAALT  RYRRAVRRPH300
PDHRRLPVIF  NDYMNCLMGD  PTTAKLLPHI  DAAAAAGAEY  FVIDAGWYDD  DEGNWWTSVG360
AWEPSSSRFP  GERGIHEVLD  RIRQLGMVPG  LWLEPEVVGV  TSPLAHSLPA  EAFFRRNGVR420
VVETGRYHLD  LRHPAARDHL  DRVVDRLVGE  LGVGYLKLDH  NIDPGPGTSG  NPGEAAADGL480
LGHNRAHLDW  LDGVLDRHPD  LVLENCASGG  MRTDYALLSR  LQLQSTSDQQ  NLALYAPIAA540
SAPTAVTPEQ  GAVWAYPQPE  DTLDEVAFTM  ANALLGRIHL  SGRLPELSPA  AQDLVAEAVA600
AHKALRADLA  TALPTWPLGL  PAWDDPWIAL  ALHTPATTYL  TVWRRPGGKD  TTVLPLPQFR660
DAAVRAEVLY  PSTSQARSHW  NQESAALKLT  LPAAPSAVVL  RLVPETGGQG  AATGDADRVK720
PEGLRPGPGM  PE732

Predicted 3D structure by AlphaFold2 with pLDDT = 91.86 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH36(77-610)

MTEESPTIRW  GHDALHLEIG  TDPDGPPRLR  RFGVPGQLPA  EPPAAAPLPL  VEATTTNHGH60
HWSGHRVIDT  VIGADLRYRG  HTAARDGAWH  RLTVQLHDPA  GGLAAEVVLS  SPDGVPALRS120
QVVIRNESTR  SLRLESVTSL  VLGGLTADAD  LEAADLLWAE  NDWLAEYRWQ  RRPMRLSSPV180
LSGRVHYRYG  KGGFAVAGQG  TWSSCDRLPM  GGLTDRRTGR  TWVWQIEHNG  GGWHWECGEH240
DDSAYLALSG  PSAGRHGWSR  LLEPGASFET  VPVAIAFGVE  GPDEAFAALT  RYRRAVRRPH300
PDHRRLPVIF  NDYMNCLMGD  PTTAKLLPHI  DAAAAAGAEY  FVIDAGWYDD  DEGNWWTSVG360
AWEPSSSRFP  GERGIHEVLD  RIRQLGMVPG  LWLEPEVVGV  TSPLAHSLPA  EAFFRRNGVR420
VVETGRYHLD  LRHPAARDHL  DRVVDRLVGE  LGVGYLKLDH  NIDPGPGTSG  NPGEAAADGL480
LGHNRAHLDW  LDGVLDRHPD  LVLENCASGG  MRTDYALLSR  LQLQSTSDQQ  NLALYAPIAA540
SAPTAVTPEQ  GAVWAYPQPE  DTLDEVAFTM  ANALLGRIHL  SGRLPELSPA  AQDLVAEAVA600
AHKALRADLA  TALPTWPLGL  PAWDDPWIAL  ALHTPATTYL  TVWRRPGGKD  TTVLPLPQFR660
DAAVRAEVLY  PSTSQARSHW  NQESAALKLT  LPAAPSAVVL  RLVPETGGQG  AATGDADRVK720
PEGLRPGPGM  PE732

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help