CAZyme3D

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Entry ID

Information for CAZyme ID: SDT27630.1

Basic Information

GenBank IDSDT27630.1
FamilyCBM35, GH39
Sequence Length714
UniProt IDA0A1H1Z1Q4(100,100)Download
Average pLDDT?93.82
CAZy50 ID26314
CAZy50 RepNo, ANV77580.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID113562
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusActinoplanes
SpeciesActinoplanes derwentensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRRKLAIAVV  ATTTASLLTA  PPASAAPSQI  SFDLATSTGA  LRYGATGFLY  GLGDEGIPNE60
TMLAALKPQV  TAQKAPDGLQ  HPNGDALRIA  PMFKRAGGRD  IQIYMQDVYQ  QWPYENLGIA120
DYLTKVDIQA  RKVVADPYRS  SYVYVPFNEP  DQIWYAGNLS  GLLADWKTVY  QRIRSIDPSA180
RIAGPGFAAY  RSADLRTFLT  YARDNGVLPD  VMAWHELGDD  FYSSWQQHYD  DYRAIETSLG240
ISARPISINE  YGRSSGDLGV  PGNLVQFVAK  FENSKVDGCL  AYWTTAGGLN  DLVTRNNQAT300
GAWWLYKWYG  DLTGNTVAVT  PPSSGGSLQG  LAAVDATKKQ  ARIILGGNNP  ASGTYDTNVQ360
VKGIPSYLGT  TVHATVWGVD  GSGLNPSTGP  YVVTEGDFTA  SSGQVTIPLT  GLKGTSAYHV420
VLTPNTDRST  ALSSRHEAEY  AVLGGTAKIT  YGTGTGYSGT  YFTEGYGGST  TASTKFVVTA480
PADGYYNLSL  RYSAGPYTGA  PANRSIRLRV  NGSNLTDVAL  PGTADWNTWN  TVTTKVYLPA540
GVNRIEYNAY  ATDDRDAVNL  DYLDLTATTG  TVTAYESESS  ANTRGGTAVV  TADSAASGGN600
YVGWIGAGAA  NTLRFNGVNA  PAAGRYRLVV  RYANAEVVGE  HQYNNNIVDR  YAEISVNGGA660
VKKHYFRNTL  AWTTYYTTTV  DVDLAAGANT  ITFGNPSSGY  APNIDRIQIA  AVLG714

Predicted 3D structure by AlphaFold2 with pLDDT = 93.82 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM35(437-565)+CBM35(575-709)

MRRKLAIAVV  ATTTASLLTA  PPASAAPSQI  SFDLATSTGA  LRYGATGFLY  GLGDEGIPNE60
TMLAALKPQV  TAQKAPDGLQ  HPNGDALRIA  PMFKRAGGRD  IQIYMQDVYQ  QWPYENLGIA120
DYLTKVDIQA  RKVVADPYRS  SYVYVPFNEP  DQIWYAGNLS  GLLADWKTVY  QRIRSIDPSA180
RIAGPGFAAY  RSADLRTFLT  YARDNGVLPD  VMAWHELGDD  FYSSWQQHYD  DYRAIETSLG240
ISARPISINE  YGRSSGDLGV  PGNLVQFVAK  FENSKVDGCL  AYWTTAGGLN  DLVTRNNQAT300
GAWWLYKWYG  DLTGNTVAVT  PPSSGGSLQG  LAAVDATKKQ  ARIILGGNNP  ASGTYDTNVQ360
VKGIPSYLGT  TVHATVWGVD  GSGLNPSTGP  YVVTEGDFTA  SSGQVTIPLT  GLKGTSAYHV420
VLTPNTDRST  ALSSRHEAEY  AVLGGTAKIT  YGTGTGYSGT  YFTEGYGGST  TASTKFVVTA480
PADGYYNLSL  RYSAGPYTGA  PANRSIRLRV  NGSNLTDVAL  PGTADWNTWN  TVTTKVYLPA540
GVNRIEYNAY  ATDDRDAVNL  DYLDLTATTG  TVTAYESESS  ANTRGGTAVV  TADSAASGGN600
YVGWIGAGAA  NTLRFNGVNA  PAAGRYRLVV  RYANAEVVGE  HQYNNNIVDR  YAEISVNGGA660
VKKHYFRNTL  AWTTYYTTTV  DVDLAAGANT  ITFGNPSSGY  APNIDRIQIA  AVLG714

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help