Information for CAZyme ID: SDT03479.1
Basic Information
| GenBank ID | SDT03479.1 |
| Family | GH92 |
| Sequence Length | 758 |
| UniProt ID | A0A1H1X4F7(100,100) |
| Average pLDDT? | 92.71 |
| CAZy50 ID | 28508 |
| CAZy50 Rep | No, SDU92906.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 546871 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Friedmanniella |
| Species | Friedmanniella luteola |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MIEHVDPFLG SAATALPPPT GLAATWWWPK PQVGNTHPGA AHPFGMVSAC AYSGAYPTGY | 60 |
| GQYELNTEGV PPQLFDRLQA TGFTHFQQSG TGAIRKYYNY FRVTPMVEPL DALGTAWELR | 120 |
| EERAEPGYYA ATLASGIRAE LTVGPKSAVH RYTFPAHKDA RLVIDFSAGG LAIPYGATVP | 180 |
| LRAHLEALAP GVAQAEIVVE GAPLAVHLEA DVDGWQQLLW YDRRLMPGGT RLDFDRIRPT | 240 |
| TLRPFGLMWR GDTEPGQVLE LRFGFSLRGV DQARTNLITD LGATPAGSTS PCSTTTSFDA | 300 |
| RHAETSAQWR RDLSRIRIET PSSERQRIFS TALYHSLVKP CFAPDESPFW PTDGPFVFDL | 360 |
| CTLWDMYRTQ LPLITALFPE RAAELAHALL YVCEEEGNLP IGYRMAKGTD RFSRQGSALA | 420 |
| QTFLADLCQL GVPGVDWDWA LVHMDTDLRR AYGEEFLLRG VVHPITHTLD LAFGYHCTAQ | 480 |
| VARHVGDVAL AEQCDALARQ WVNAFDPATG LLVDSSYYEG GRWNYSFRVL HDMQARIDLA | 540 |
| GGDDAFVALL DSFFGYGAEP VRQVGERPGV AEMLAGYALN RFEGLNNEPD MEVPWAYHYV | 600 |
| GRPDRTAEVV HAAVHAMFGL GRGGLPGNDD SGGLSSWYVW ASLGLFPIAG QSLYLVNAPS | 660 |
| FSQSRIRLGE EELAVETTGF VEPVAGGPVQ YVQTVTFNGR PLEQSWLPAR DLHRGGRLVV | 720 |
| ELGPSPSAWG TTSRPPSVSA PATPAVPSHP AVPRDPAG | 758 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.71 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH92(253-726)
| MIEHVDPFLG SAATALPPPT GLAATWWWPK PQVGNTHPGA AHPFGMVSAC AYSGAYPTGY | 60 |
| GQYELNTEGV PPQLFDRLQA TGFTHFQQSG TGAIRKYYNY FRVTPMVEPL DALGTAWELR | 120 |
| EERAEPGYYA ATLASGIRAE LTVGPKSAVH RYTFPAHKDA RLVIDFSAGG LAIPYGATVP | 180 |
| LRAHLEALAP GVAQAEIVVE GAPLAVHLEA DVDGWQQLLW YDRRLMPGGT RLDFDRIRPT | 240 |
| TLRPFGLMWR GDTEPGQVLE LRFGFSLRGV DQARTNLITD LGATPAGSTS PCSTTTSFDA | 300 |
| RHAETSAQWR RDLSRIRIET PSSERQRIFS TALYHSLVKP CFAPDESPFW PTDGPFVFDL | 360 |
| CTLWDMYRTQ LPLITALFPE RAAELAHALL YVCEEEGNLP IGYRMAKGTD RFSRQGSALA | 420 |
| QTFLADLCQL GVPGVDWDWA LVHMDTDLRR AYGEEFLLRG VVHPITHTLD LAFGYHCTAQ | 480 |
| VARHVGDVAL AEQCDALARQ WVNAFDPATG LLVDSSYYEG GRWNYSFRVL HDMQARIDLA | 540 |
| GGDDAFVALL DSFFGYGAEP VRQVGERPGV AEMLAGYALN RFEGLNNEPD MEVPWAYHYV | 600 |
| GRPDRTAEVV HAAVHAMFGL GRGGLPGNDD SGGLSSWYVW ASLGLFPIAG QSLYLVNAPS | 660 |
| FSQSRIRLGE EELAVETTGF VEPVAGGPVQ YVQTVTFNGR PLEQSWLPAR DLHRGGRLVV | 720 |
| ELGPSPSAWG TTSRPPSVSA PATPAVPSHP AVPRDPAG | 758 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.