Information for CAZyme ID: SDD58521.1
Basic Information
GenBank ID | SDD58521.1 |
Family | GH13 |
Sequence Length | 1169 |
UniProt ID | A0A1G6VY71(100,100)![]() |
Average pLDDT? | 87.81 |
CAZy50 ID | 1644 |
CAZy50 Rep | No, SDS03674.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 675864 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Propionibacteriales |
Family | Propionibacteriaceae |
Genus | Auraticoccus |
Species | Auraticoccus monumenti |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTRTTPSTPA PATRTRRLTA LLGALALAAT AAPLATLTAA PAAADEDVVT LVGSLQSELG | 60 |
CEADWEPACA ATVLEPVRGS TTTRSATFTV PAGSWTFKVA VGGSWDESHP AADRPLVLTT | 120 |
PAEVEFVFDT ETDAVDVRSA ELPGSATAAD RALVGDSLRE AVTDEQFYFV MADRFADGDP | 180 |
SNNTGGLPGG RLDHGFDPTD KGFYHGGDLA GVLDRLDYIE GLGTTAIWLT PSFKNQPVQG | 240 |
AGDAASAGYH GYWITDFTQI DPHLGTNEEM RELIDAAHAR GMKVYFDIIT NHTADVIDYA | 300 |
EGRYSYVSKE ARPYTDAAGQ PFDDADFAGT DTFPEVDPAT SFPYTPVFRE PADETAKVPA | 360 |
WLNDPRLYHN RGDSTFAGES STHGDFVGLD DLWTERSEVV EGMIDIYSTW ARFGIDGFRV | 420 |
DTVKHVNLEF WQEFSPAVLE AAREENEDFF MFGEVYDANP AYLSTFTTEG ELQATIDFGF | 480 |
QARSVEAAAG SVPTTGLRDF FAADDYYTDT DSNAYQLPTF TGNHDMGRAA MLLAAKGLSG | 540 |
DELLQRVGLT NELMFTSRGQ PVVYYGDEQG FVGAGGDKDA RQDMFATQVQ QYADEPVLGG | 600 |
PAGSRDRYDT SHPLYRQIRE LSDLRAEHPA LVDGAQVHRY ASEDGLYAFA RVDEEQREYL | 660 |
VVVNTSGTEQ SASLRTWTPR GTLRGVHGDD ARLRADAEGR VDVTVAPAST EVYRSDRTLA | 720 |
RRKRAPQVLL TSPDGRPGQP AEQSVVGGRA EIRAGSVEDV AATAGFAWRE AGTQEWTPLG | 780 |
VDDNAPYRVF HDVRGLGAGT LLEYRVVLRD SSGNLSADSA SAVVGDPVPV DPGPGGPTGP | 840 |
VEQPDAVAVA GDHNSEMGCP ADWSPDCDAA QLTLDAEDGI WKGTFTLPAS PHAYKAAIDR | 900 |
SWDENYGEGA VRDGGNLSYT APGTPVTFYY DHATHWVTSD AQGPIITAPG SMQSELGCAA | 960 |
DWSPDCMRPW LQDPDGDGTF TWSSVEVPAG SYDLKVAHGL SWDESYGAGG EADGGNVSFT | 1020 |
VAEEGLVTTV SYVLATHEIR VGTTRPGAEP DLGVARAQWV ESDLLAWPSD ALPDLPVELL | 1080 |
DWRLHAAPDG GMGIDAETLS GSTSFRLTRD PDGFPDDVLA EHPELEGFVA LRLNRASVRG | 1140 |
ARALRDGQLA VALYDDLGRV VDAGGVLLR | 1169 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.81 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH13_13(215-569)
MTRTTPSTPA PATRTRRLTA LLGALALAAT AAPLATLTAA PAAADEDVVT LVGSLQSELG | 60 |
CEADWEPACA ATVLEPVRGS TTTRSATFTV PAGSWTFKVA VGGSWDESHP AADRPLVLTT | 120 |
PAEVEFVFDT ETDAVDVRSA ELPGSATAAD RALVGDSLRE AVTDEQFYFV MADRFADGDP | 180 |
SNNTGGLPGG RLDHGFDPTD KGFYHGGDLA GVLDRLDYIE GLGTTAIWLT PSFKNQPVQG | 240 |
AGDAASAGYH GYWITDFTQI DPHLGTNEEM RELIDAAHAR GMKVYFDIIT NHTADVIDYA | 300 |
EGRYSYVSKE ARPYTDAAGQ PFDDADFAGT DTFPEVDPAT SFPYTPVFRE PADETAKVPA | 360 |
WLNDPRLYHN RGDSTFAGES STHGDFVGLD DLWTERSEVV EGMIDIYSTW ARFGIDGFRV | 420 |
DTVKHVNLEF WQEFSPAVLE AAREENEDFF MFGEVYDANP AYLSTFTTEG ELQATIDFGF | 480 |
QARSVEAAAG SVPTTGLRDF FAADDYYTDT DSNAYQLPTF TGNHDMGRAA MLLAAKGLSG | 540 |
DELLQRVGLT NELMFTSRGQ PVVYYGDEQG FVGAGGDKDA RQDMFATQVQ QYADEPVLGG | 600 |
PAGSRDRYDT SHPLYRQIRE LSDLRAEHPA LVDGAQVHRY ASEDGLYAFA RVDEEQREYL | 660 |
VVVNTSGTEQ SASLRTWTPR GTLRGVHGDD ARLRADAEGR VDVTVAPAST EVYRSDRTLA | 720 |
RRKRAPQVLL TSPDGRPGQP AEQSVVGGRA EIRAGSVEDV AATAGFAWRE AGTQEWTPLG | 780 |
VDDNAPYRVF HDVRGLGAGT LLEYRVVLRD SSGNLSADSA SAVVGDPVPV DPGPGGPTGP | 840 |
VEQPDAVAVA GDHNSEMGCP ADWSPDCDAA QLTLDAEDGI WKGTFTLPAS PHAYKAAIDR | 900 |
SWDENYGEGA VRDGGNLSYT APGTPVTFYY DHATHWVTSD AQGPIITAPG SMQSELGCAA | 960 |
DWSPDCMRPW LQDPDGDGTF TWSSVEVPAG SYDLKVAHGL SWDESYGAGG EADGGNVSFT | 1020 |
VAEEGLVTTV SYVLATHEIR VGTTRPGAEP DLGVARAQWV ESDLLAWPSD ALPDLPVELL | 1080 |
DWRLHAAPDG GMGIDAETLS GSTSFRLTRD PDGFPDDVLA EHPELEGFVA LRLNRASVRG | 1140 |
ARALRDGQLA VALYDDLGRV VDAGGVLLR | 1169 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.