Information for CAZyme ID: SBT45215.1
Basic Information
| GenBank ID | SBT45215.1 |
| Family | CBM25, GH13_42 |
| Sequence Length | 1007 |
| UniProt ID | A0A1A8ZN22(100,100) |
| Average pLDDT? | 89.07 |
| CAZy50 ID | 6471 |
| CAZy50 Rep | No, AOF40721.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 261654 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micromonosporales |
| Family | Micromonosporaceae |
| Genus | Micromonospora |
| Species | Micromonospora auratinigra |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRRTTITSRR RWGAFALGAG LVVGLLPFSA AAAANSVTVY YQPPAAWGGA VNIHYGVDGQ | 60 |
| AWTAVPGVPM GTACTGWRRS TIDLGAAAGL QVVFTNGGGV WDNNNGANYR LGTGTVTVAA | 120 |
| GKVGTGDPCA GSTPSPGPSG SATPSPSPAG NTAEVWYHLT ARGWTAANIH YRPTGGTWTT | 180 |
| APGVAMEVRC AGWARRVVDL GSATGLTAAF NDTAGTWDNN NSADYPIGTG RSTVDAGRVT | 240 |
| PNAADPCAPA TPDRTPPSIP AGLTATADGL AVTLSWTAAT DDRGVTGYEL TRTGGAGSTT | 300 |
| VTSTTPRYVA YDLLPGTAYT WTVRAVDAAG NRSAASLPAS ATTGSAPAGG APLGGDPRED | 360 |
| SIYFVMTARF ADGDTGNDRG GSQHVASGNA ANDDPMFRGD FKGLVDKLDY IKGLGFSAIW | 420 |
| ITPVVLNRSD YDYHGYHGWD FYRVDPRLES PGASYQNLID AAHAKGIKIF QDVVYNHTSR | 480 |
| WGAKGLFTPT VYGVRDEQWK WYYDQPQAGR EYDPLVEATG TDPALTPAQN AKAKGRPYNG | 540 |
| DLWSSAPPTG NQCLNWGTPT GGRSAEGFTL YNCQWPTPTG KLFPADLYHQ CWIGNWEGED | 600 |
| ARSCWLHEDL ADLNTENATV QQYLINAYNR YIDMGVDGFR IDTAVHIPRV TWNRRFLPAI | 660 |
| RQHAVSRFGA KGRDFYVFGE VAAFVNDKWN RGSVNHSAQF YTWSERKEYS PDDVKAAIEQ | 720 |
| YDYEQLLGPS GQPTTDNAFL RGNDYHAPDH STFSGMNVID MRMHMNFGDA TNAFLNGRDS | 780 |
| DDSYNDATYN VVYVDSHDYG PNKSSTRYAG GTDAWAENMS LMWTFRGIPT LYYGSEIEFQ | 840 |
| KGARIDCGPT CPLATTGRAY YGDHLAGSVT ATDFGVVGSA GGAVATTLSQ PLVKHVQRLN | 900 |
| RIRRAVPALQ KGQYSTEGIS GNTLAYKRRY TAGTVDSFAL VTVSGGATFT GIPNGRYVDV | 960 |
| VTGTVQTVGN GTLTAPVSGK GNLRVYVLDL PGNPAPGKIG TDGPYLR | 1007 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.07 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM25(35-111)+CBM25(151-226)+GH13_42(398-842)
| MRRTTITSRR RWGAFALGAG LVVGLLPFSA AAAANSVTVY YQPPAAWGGA VNIHYGVDGQ | 60 |
| AWTAVPGVPM GTACTGWRRS TIDLGAAAGL QVVFTNGGGV WDNNNGANYR LGTGTVTVAA | 120 |
| GKVGTGDPCA GSTPSPGPSG SATPSPSPAG NTAEVWYHLT ARGWTAANIH YRPTGGTWTT | 180 |
| APGVAMEVRC AGWARRVVDL GSATGLTAAF NDTAGTWDNN NSADYPIGTG RSTVDAGRVT | 240 |
| PNAADPCAPA TPDRTPPSIP AGLTATADGL AVTLSWTAAT DDRGVTGYEL TRTGGAGSTT | 300 |
| VTSTTPRYVA YDLLPGTAYT WTVRAVDAAG NRSAASLPAS ATTGSAPAGG APLGGDPRED | 360 |
| SIYFVMTARF ADGDTGNDRG GSQHVASGNA ANDDPMFRGD FKGLVDKLDY IKGLGFSAIW | 420 |
| ITPVVLNRSD YDYHGYHGWD FYRVDPRLES PGASYQNLID AAHAKGIKIF QDVVYNHTSR | 480 |
| WGAKGLFTPT VYGVRDEQWK WYYDQPQAGR EYDPLVEATG TDPALTPAQN AKAKGRPYNG | 540 |
| DLWSSAPPTG NQCLNWGTPT GGRSAEGFTL YNCQWPTPTG KLFPADLYHQ CWIGNWEGED | 600 |
| ARSCWLHEDL ADLNTENATV QQYLINAYNR YIDMGVDGFR IDTAVHIPRV TWNRRFLPAI | 660 |
| RQHAVSRFGA KGRDFYVFGE VAAFVNDKWN RGSVNHSAQF YTWSERKEYS PDDVKAAIEQ | 720 |
| YDYEQLLGPS GQPTTDNAFL RGNDYHAPDH STFSGMNVID MRMHMNFGDA TNAFLNGRDS | 780 |
| DDSYNDATYN VVYVDSHDYG PNKSSTRYAG GTDAWAENMS LMWTFRGIPT LYYGSEIEFQ | 840 |
| KGARIDCGPT CPLATTGRAY YGDHLAGSVT ATDFGVVGSA GGAVATTLSQ PLVKHVQRLN | 900 |
| RIRRAVPALQ KGQYSTEGIS GNTLAYKRRY TAGTVDSFAL VTVSGGATFT GIPNGRYVDV | 960 |
| VTGTVQTVGN GTLTAPVSGK GNLRVYVLDL PGNPAPGKIG TDGPYLR | 1007 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.