Information for CAZyme ID: SBP00538.1
Basic Information
GenBank ID | SBP00538.1 |
Family | GT35 |
Sequence Length | 860 |
UniProt ID | A0A1M4ENY4(100,100)![]() |
Average pLDDT? | 92.25 |
CAZy50 ID | 4346 |
CAZy50 Rep | No, CAM05389.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 93944 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Streptosporangiales |
Family | Streptosporangiaceae |
Genus | Nonomuraea |
Species | Nonomuraea gerenzanensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRAIRRFTVR TVLPAELAAL GELVHNLRWS WHPETMDLFA EVDADLWEQV GHDPVALLGA | 60 |
VTPARLSELA ADRRFLRRLA DAADDLREYI TSPRWYQTLP EAARAIAYFS PEFGIAAALP | 120 |
QYSGGLGILA GDHLKAASDL GVPILAVGLL YRHGYFTQSL SPEGWQLEHY PSLDAGGLPL | 180 |
SLLKDAEGTP VKIRLALPDE RVLHAQVWVA QVGRVPLLLL DSDVADNDAA ARDVTDRLYG | 240 |
GGTDHRLMQE LLLGVGGVRA IRAYCKITGH AEPEVFHTNE GHAGFLGLER IRELTEARMS | 300 |
FDEALEAVRA GTVFTTHTPV PAGIDRFPID MIERHFGGAN AWPTVPVERI LALGAESDPG | 360 |
RFNMAVMGMR LAQRVNGVSQ LHGEVSREMF KNLWPGFDLD EVPIGSITNG VHAPTWVGRE | 420 |
LMELAGREVP SLLERARGWE AIQKISDTDI WEIRGVLRRR LVEGARERLR RSWRERGASD | 480 |
AELGWIDDAL DPGVLTIGFA RRVPSYKRLT LMLRDPERLT ELLLDPDKPV QIVIAGKAHP | 540 |
ADEGGKKLIQ QIVKFADRAD VRHRIVFLPD YDMALGQLMV QGCDVWLNNP LRPLEASGTS | 600 |
GMKSALNGGL NLSIRDGWWD EWYDGTNGWA IPTADGVSDP DRRDELEAAA LYDLIEHEVS | 660 |
DRFYDRALDG LPRRWMEMVK HTLTSLGPKV LAGRMLRDYV VDLYNPAAAS ARALSADSYA | 720 |
PAKAFAAWRV RVTRAWPGVR VEHAEAAGVG DTPEVGAAIE LHATIALGDL EPDDVLVEAA | 780 |
YGKVGPHDEL VHPSYTKLTV RSVDDDGRAH YTGTVPLDRT GAFGYTVRVV PSHPLLATPS | 840 |
ELGLIAVPEE PAGMTNGTLR | 860 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.25 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT35(242-631)
MRAIRRFTVR TVLPAELAAL GELVHNLRWS WHPETMDLFA EVDADLWEQV GHDPVALLGA | 60 |
VTPARLSELA ADRRFLRRLA DAADDLREYI TSPRWYQTLP EAARAIAYFS PEFGIAAALP | 120 |
QYSGGLGILA GDHLKAASDL GVPILAVGLL YRHGYFTQSL SPEGWQLEHY PSLDAGGLPL | 180 |
SLLKDAEGTP VKIRLALPDE RVLHAQVWVA QVGRVPLLLL DSDVADNDAA ARDVTDRLYG | 240 |
GGTDHRLMQE LLLGVGGVRA IRAYCKITGH AEPEVFHTNE GHAGFLGLER IRELTEARMS | 300 |
FDEALEAVRA GTVFTTHTPV PAGIDRFPID MIERHFGGAN AWPTVPVERI LALGAESDPG | 360 |
RFNMAVMGMR LAQRVNGVSQ LHGEVSREMF KNLWPGFDLD EVPIGSITNG VHAPTWVGRE | 420 |
LMELAGREVP SLLERARGWE AIQKISDTDI WEIRGVLRRR LVEGARERLR RSWRERGASD | 480 |
AELGWIDDAL DPGVLTIGFA RRVPSYKRLT LMLRDPERLT ELLLDPDKPV QIVIAGKAHP | 540 |
ADEGGKKLIQ QIVKFADRAD VRHRIVFLPD YDMALGQLMV QGCDVWLNNP LRPLEASGTS | 600 |
GMKSALNGGL NLSIRDGWWD EWYDGTNGWA IPTADGVSDP DRRDELEAAA LYDLIEHEVS | 660 |
DRFYDRALDG LPRRWMEMVK HTLTSLGPKV LAGRMLRDYV VDLYNPAAAS ARALSADSYA | 720 |
PAKAFAAWRV RVTRAWPGVR VEHAEAAGVG DTPEVGAAIE LHATIALGDL EPDDVLVEAA | 780 |
YGKVGPHDEL VHPSYTKLTV RSVDDDGRAH YTGTVPLDRT GAFGYTVRVV PSHPLLATPS | 840 |
ELGLIAVPEE PAGMTNGTLR | 860 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.