Information for CAZyme ID: SBO98101.1
Basic Information
| GenBank ID | SBO98101.1 |
| Family | CBM6 |
| Sequence Length | 1098 |
| UniProt ID | A0A1M4EGJ3(100,100) |
| Average pLDDT? | 91.11 |
| CAZy50 ID | 1764 |
| CAZy50 Rep | No, UDF12423.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 93944 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Streptosporangiales |
| Family | Streptosporangiaceae |
| Genus | Nonomuraea |
| Species | Nonomuraea gerenzanensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MQRTLAVLGG LVLAGACLSL PAQAHDPATT WSSYEKITLT KNVGEPIDLA VLPDRRVLHT | 60 |
| ARNGDIRLTD PATGVTRIIN TVPVYANSED GLQTIALDPA FDQNKWVYLY YAPRTMTAPY | 120 |
| PEATPAGSAP NTLPAGADET YWNQWKGYNQ LSRFKWTGSA LDLSTEQVII KVETQRGQCC | 180 |
| HVAGDLDWDA DGNLYLATGD NTPAGTPGAN GMAPNNDAPG MNPGLDARRG AGNSNDLRGK | 240 |
| ILRIKVAADG TYTVPEGNLF APGTAGTRPE IFVTGVRNPF RMDVDAETGT LSWADYGPDA | 300 |
| GTGDPARGPM GYVEWNITPL TKPMNSGWPY CTGDDFNYND WNFATAQPGP WFDCAAGPRN | 360 |
| TSRWNTGLAQ LPPAVPADLY YGDNNTHQPA AWAGLTDFDP QTGQGPMGGP VYHYDPDNPA | 420 |
| PGKLPAYWDG KAFFAEFSQD YLAAFTFTGA DGPVTAIEHF LPNSALRTAA QPITDSPMDL | 480 |
| EFGPDGSLYV LEYGDGFFRA NPDAGLYRID YTPANKTPQA RIAADRTSSS AAPLTVAFDA | 540 |
| TASTDTEPGT LTYEWDFDGD GDFDATGVTA THTYTELGQY AARLRVTDSG GRAGLTSVEI | 600 |
| TVGNTAPVVT VKAPPNGGFF DWGNALPYQI GVSDAEDGDN PVCSRVQWTF GLGHDTHAHP | 660 |
| ETLGTGCAGA WPTPASAPEH GETENIYGVV VVSYRDNGAG SIPGALGEAA LTLNPKLAQA | 720 |
| EHADESSGVT ETADDTASAK AKVTSFDAGD WIVYDPVHFA GITGVQTRAS GAGTLALRWK | 780 |
| SPAAEPFATV TVPAGDGWQT VTTPLTGLPE GTGRLYVTSS GGVEVDAFTF QGGGVADTTP | 840 |
| PVVSATLTPA QPDGANGWYT GNVTLAVTAT DNGTVASRQY SLDGATWSNA NNPVTLSAEG | 900 |
| ARQVRYRATD NGGNVSAVGT LTVKIDKSNP TLTVTGVEPG PHGDSATLTP VLTGADTVSG | 960 |
| VAGVTAELDG AAIGSGKPVA LWTLPLGEHR LTGTVTDQAG RTATTTVTFS TTTSYADVRV | 1020 |
| LVSRFRQSGA ITWRAAADLQ EQLAQAERHE KKGKRALAIA ALERFVKIAE KRGNVRDAAV | 1080 |
| RSALVRDADA LIERLRQT | 1098 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.11 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM6(718-831)
| MQRTLAVLGG LVLAGACLSL PAQAHDPATT WSSYEKITLT KNVGEPIDLA VLPDRRVLHT | 60 |
| ARNGDIRLTD PATGVTRIIN TVPVYANSED GLQTIALDPA FDQNKWVYLY YAPRTMTAPY | 120 |
| PEATPAGSAP NTLPAGADET YWNQWKGYNQ LSRFKWTGSA LDLSTEQVII KVETQRGQCC | 180 |
| HVAGDLDWDA DGNLYLATGD NTPAGTPGAN GMAPNNDAPG MNPGLDARRG AGNSNDLRGK | 240 |
| ILRIKVAADG TYTVPEGNLF APGTAGTRPE IFVTGVRNPF RMDVDAETGT LSWADYGPDA | 300 |
| GTGDPARGPM GYVEWNITPL TKPMNSGWPY CTGDDFNYND WNFATAQPGP WFDCAAGPRN | 360 |
| TSRWNTGLAQ LPPAVPADLY YGDNNTHQPA AWAGLTDFDP QTGQGPMGGP VYHYDPDNPA | 420 |
| PGKLPAYWDG KAFFAEFSQD YLAAFTFTGA DGPVTAIEHF LPNSALRTAA QPITDSPMDL | 480 |
| EFGPDGSLYV LEYGDGFFRA NPDAGLYRID YTPANKTPQA RIAADRTSSS AAPLTVAFDA | 540 |
| TASTDTEPGT LTYEWDFDGD GDFDATGVTA THTYTELGQY AARLRVTDSG GRAGLTSVEI | 600 |
| TVGNTAPVVT VKAPPNGGFF DWGNALPYQI GVSDAEDGDN PVCSRVQWTF GLGHDTHAHP | 660 |
| ETLGTGCAGA WPTPASAPEH GETENIYGVV VVSYRDNGAG SIPGALGEAA LTLNPKLAQA | 720 |
| EHADESSGVT ETADDTASAK AKVTSFDAGD WIVYDPVHFA GITGVQTRAS GAGTLALRWK | 780 |
| SPAAEPFATV TVPAGDGWQT VTTPLTGLPE GTGRLYVTSS GGVEVDAFTF QGGGVADTTP | 840 |
| PVVSATLTPA QPDGANGWYT GNVTLAVTAT DNGTVASRQY SLDGATWSNA NNPVTLSAEG | 900 |
| ARQVRYRATD NGGNVSAVGT LTVKIDKSNP TLTVTGVEPG PHGDSATLTP VLTGADTVSG | 960 |
| VAGVTAELDG AAIGSGKPVA LWTLPLGEHR LTGTVTDQAG RTATTTVTFS TTTSYADVRV | 1020 |
| LVSRFRQSGA ITWRAAADLQ EQLAQAERHE KKGKRALAIA ALERFVKIAE KRGNVRDAAV | 1080 |
| RSALVRDADA LIERLRQT | 1098 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.