CAZyme3D

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Entry ID

Information for CAZyme ID: QUJ73244.1

Basic Information

GenBank IDQUJ73244.1
FamilyGT2
Sequence Length237
UniProt IDM0K046(100,100)Download
Average pLDDT?92.81
CAZy50 ID156774
CAZy50 RepNo, AGB17247.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID662476
KingdomArchaea
PhylumEuryarchaeota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHaloarcula
SpeciesHaloarcula sinaiiensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAIQGSRTEG  LGGYTFDDLA  VVMGTYNEEE  AIGTVLDDIA  TVTDSRAEVI  CVDGSSDRTP60
EIARDHGATV  IEQEPQGYGV  AVREAVLTPD  RPVVVTTDCD  DTYPMERLPD  FLAEINDGAD120
VVSGDRLYYG  AEQMPAMNKL  GNELFALLAS  VLMGKRVHDT  TTGMRAYRRE  VLQKIVWTEN180
TGLSAELLMR  PLMRGYDVRE  RPIEYDERKG  ETKLDPFSGG  AAIAKSIVRV  ALEERFR237

Predicted 3D structure by AlphaFold2 with pLDDT = 92.81 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(21-175)

MAIQGSRTEG  LGGYTFDDLA  VVMGTYNEEE  AIGTVLDDIA  TVTDSRAEVI  CVDGSSDRTP60
EIARDHGATV  IEQEPQGYGV  AVREAVLTPD  RPVVVTTDCD  DTYPMERLPD  FLAEINDGAD120
VVSGDRLYYG  AEQMPAMNKL  GNELFALLAS  VLMGKRVHDT  TTGMRAYRRE  VLQKIVWTEN180
TGLSAELLMR  PLMRGYDVRE  RPIEYDERKG  ETKLDPFSGG  AAIAKSIVRV  ALEERFR237

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help