Information for CAZyme ID: QQN64200.1
Basic Information
GenBank ID | QQN64200.1 |
Family | GT51 |
Sequence Length | 735 |
UniProt ID | A0A7T7V984(100,100)![]() |
Average pLDDT? | 78.69 |
CAZy50 ID | 16925 |
CAZy50 Rep | No, BCP55952.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1355477 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Alphaproteobacteria |
Order | Hyphomicrobiales |
Family | Nitrobacteraceae |
Genus | Bradyrhizobium |
Species | Bradyrhizobium diazoefficiens |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MGSGKKKGGR KEPLFGLPAA LADLRLTAAD RIPNAEDKPK KSSSKRKSDT SDDEPPRERK | 60 |
AQAIRGGARR RSKSRMGAGL GRLVYWGAVL SLWGVIAVFG VVIWVGAHLP PIQSLEIPKR | 120 |
PPTIQIVGVD GSLLAQRGEM AGANVSLKDL PPYLPKAFIA IEDRRFYSHF GIDPIGILRA | 180 |
LVTNVLHRGV SQGGSTLTQQ LAKNLFLTHE RTMARKLQEA ELAIWLERKH SKNEILELYL | 240 |
NRVYFGSGAY GVEAAAQKYF GKPAKNVTIA EAAMLAGLVK SPSRLAPNRN PEGAEQRAQI | 300 |
VLAAMADAKF ITEAQAQASI GHPSYNVKPV GAGTVNYVAD WIGEVLDDLV GQIDQSIKVE | 360 |
TTIDPKLQAV AEAAVIDELA AKSVKFNVSQ GALVAMTPDG AVRAMVGGRN YSESQYNRAV | 420 |
TAKRQPGSSF KPFVYLTALE QGLTPDTVRQ DAPIEVKGWR PENYTHEYFG AVTLTQALAM | 480 |
SLNTVAIRLG LEVGPKNVVR TAHRLGISSK LEPNASIALG TSEVSVVEMV GAYAPFANGG | 540 |
FAAVPHVVTR IRTLDGKLLY MRQPDEHNQV IEPRYVGMMN TMMRETLISG TAKKAEIPGW | 600 |
QAAGKTGTSQ DYRDAWFIGY TANLVTGVWL GNDDNSPTKK ATGGGLPVEV WTRFMRAAHE | 660 |
GVPVAALPNL QSNWGPANLV QISSQVSPPT QAAPGPAPIS NGGYRAPPPT RANVRPEAAA | 720 |
GLDGWLMDRL FGGNR | 735 |
Predicted 3D structure by AlphaFold2 with pLDDT = 78.69 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(131-305)
MGSGKKKGGR KEPLFGLPAA LADLRLTAAD RIPNAEDKPK KSSSKRKSDT SDDEPPRERK | 60 |
AQAIRGGARR RSKSRMGAGL GRLVYWGAVL SLWGVIAVFG VVIWVGAHLP PIQSLEIPKR | 120 |
PPTIQIVGVD GSLLAQRGEM AGANVSLKDL PPYLPKAFIA IEDRRFYSHF GIDPIGILRA | 180 |
LVTNVLHRGV SQGGSTLTQQ LAKNLFLTHE RTMARKLQEA ELAIWLERKH SKNEILELYL | 240 |
NRVYFGSGAY GVEAAAQKYF GKPAKNVTIA EAAMLAGLVK SPSRLAPNRN PEGAEQRAQI | 300 |
VLAAMADAKF ITEAQAQASI GHPSYNVKPV GAGTVNYVAD WIGEVLDDLV GQIDQSIKVE | 360 |
TTIDPKLQAV AEAAVIDELA AKSVKFNVSQ GALVAMTPDG AVRAMVGGRN YSESQYNRAV | 420 |
TAKRQPGSSF KPFVYLTALE QGLTPDTVRQ DAPIEVKGWR PENYTHEYFG AVTLTQALAM | 480 |
SLNTVAIRLG LEVGPKNVVR TAHRLGISSK LEPNASIALG TSEVSVVEMV GAYAPFANGG | 540 |
FAAVPHVVTR IRTLDGKLLY MRQPDEHNQV IEPRYVGMMN TMMRETLISG TAKKAEIPGW | 600 |
QAAGKTGTSQ DYRDAWFIGY TANLVTGVWL GNDDNSPTKK ATGGGLPVEV WTRFMRAAHE | 660 |
GVPVAALPNL QSNWGPANLV QISSQVSPPT QAAPGPAPIS NGGYRAPPPT RANVRPEAAA | 720 |
GLDGWLMDRL FGGNR | 735 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.