CAZyme3D

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Entry ID

Information for CAZyme ID: QQM39363.1

Basic Information

GenBank IDQQM39363.1
FamilyGH92
Sequence Length782
UniProt IDA0A7T7KUU6(100,100)Download
Average pLDDT?93.40
CAZy50 ID4673
CAZy50 RepNo, QDZ15642.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2797636
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces liliifuscus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRWTGRPRPR  TAAVIAAALL  GLGGGLTAPD  VRAAEPGEGR  LTELVNPFIG  TQNEGNTFPG60
AAVPFGMVQL  SPDTGHNTGY  DYSQRHIRGF  SLVHLSGVGC  RLGGDLPVLP  TTGDVTQTDY120
AKYAAEFGHD  AEKASPGHYK  VGLKSGIDAE  LTATARTGVQ  RYTFPATDKA  NVLLNAGQSL180
HRTVSTSIEI  LDDRTVRSTI  TGSGFCRATG  PYTVHTLTRF  DRPFTTSGTW  QGDTVTEGST240
RSAGTGRNGA  YLRFDTTKDR  TVEATTALSY  VDARGAAVNL  RSEGGRSFDS  VRDSARRAWE300
DRLDDVRVRG  GEETLRRTFY  SSLYRSFLAP  NIGSDADGRY  TGWDRKVHRE  KGFTYYQNWS360
LWDTYRTQAQ  LLALLAPRES  RDMALSVLQI  DEEGGWLPKW  GYGTIETNIM  TGDPVTPFLT420
NAYQQGLLDG  HEERTYRALK  KNADGVPPAD  SPALGREGNK  EYIADGFVPR  LKGRPHAKPG480
DSDYDHGASA  TLEYALSDAM  LAQMARDLGH  EADAARYAAR  AQNYRRIFDP  STGFFRARDA540
SGAFTGAADP  ARTEGFHEGT  SWQYQWLVPQ  DLPGMIDLIG  GRQAANDRLD  AFFAYDRLMK600
DPARTAREVW  VNGPYAYYNA  DKYNPQNEPD  LIAPYTYLST  GRPWQTTDVV  RAALTLFTDA660
PTGMTGNDDL  GTMSAWHVLS  SIGIFPVQPG  FDTWGLSTPV  FERVDLALDR  RYHPLGALAV720
TAGPDVSDGR  RYIRAVQGDG  VAHDRTYLTT  DELRGIRELA  FTVGAKPSDW  GTDPDAAPPV780
LK782

Predicted 3D structure by AlphaFold2 with pLDDT = 93.40 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH92(248-767)

MRWTGRPRPR  TAAVIAAALL  GLGGGLTAPD  VRAAEPGEGR  LTELVNPFIG  TQNEGNTFPG60
AAVPFGMVQL  SPDTGHNTGY  DYSQRHIRGF  SLVHLSGVGC  RLGGDLPVLP  TTGDVTQTDY120
AKYAAEFGHD  AEKASPGHYK  VGLKSGIDAE  LTATARTGVQ  RYTFPATDKA  NVLLNAGQSL180
HRTVSTSIEI  LDDRTVRSTI  TGSGFCRATG  PYTVHTLTRF  DRPFTTSGTW  QGDTVTEGST240
RSAGTGRNGA  YLRFDTTKDR  TVEATTALSY  VDARGAAVNL  RSEGGRSFDS  VRDSARRAWE300
DRLDDVRVRG  GEETLRRTFY  SSLYRSFLAP  NIGSDADGRY  TGWDRKVHRE  KGFTYYQNWS360
LWDTYRTQAQ  LLALLAPRES  RDMALSVLQI  DEEGGWLPKW  GYGTIETNIM  TGDPVTPFLT420
NAYQQGLLDG  HEERTYRALK  KNADGVPPAD  SPALGREGNK  EYIADGFVPR  LKGRPHAKPG480
DSDYDHGASA  TLEYALSDAM  LAQMARDLGH  EADAARYAAR  AQNYRRIFDP  STGFFRARDA540
SGAFTGAADP  ARTEGFHEGT  SWQYQWLVPQ  DLPGMIDLIG  GRQAANDRLD  AFFAYDRLMK600
DPARTAREVW  VNGPYAYYNA  DKYNPQNEPD  LIAPYTYLST  GRPWQTTDVV  RAALTLFTDA660
PTGMTGNDDL  GTMSAWHVLS  SIGIFPVQPG  FDTWGLSTPV  FERVDLALDR  RYHPLGALAV720
TAGPDVSDGR  RYIRAVQGDG  VAHDRTYLTT  DELRGIRELA  FTVGAKPSDW  GTDPDAAPPV780
LK782

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help