CAZyme3D

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Entry ID

Information for CAZyme ID: QQA37040.1

Basic Information

GenBank IDQQA37040.1
FamilyGH78
Sequence Length774
UniProt IDA0A7T3W0P1(100,100)Download
Average pLDDT?94.83
CAZy50 ID17143
CAZy50 RepNo, ULT58258.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2774330
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyAerococcaceae
Genus
SpeciesAerococcaceae bacterium zg-1292

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRNNKFSWVG  RWISTARALV  NEEPEFSLVD  MFAGKKAKQT  PVEERLNPTV  YFKKVFQLNK60
PIKKAELIVT  AQGIYHAMMN  GHEVTDAIFT  PDYTNYQQFL  MYQQYDVTNL  IKVGTNVLAV120
EVADGWYAGR  ISVQGGSAQF  GNRLALLADL  VVTFEDEKQL  IIGTDNSFTA  GYGKHVYADI180
QIGEKQDLRL  DTDWQVSEEL  LPEAVFEIAA  DYTRLTPQEG  PMVYRQERLD  AQKIWLEDTE240
YIVDFGQVIA  GRVRLTVDLA  KDQEIIIEHS  EVLDETGRFF  RNIVGRNKDA  RDIFIGRGQK300
EVLEPDFTFH  GFRYVKITGL  THFKLDDIKA  IAIYSQMETT  GYFKTNDAKM  NRLLSNILWS360
QKGNMLSIPT  DCPQRERVGW  TGDMQVFASA  STFFMNSNQL  IQRWLKTVRI  DQRENGAIVD420
YSPEPLDAKN  LAFTGVEASA  GWGDAIIMVP  WTLYQRYGNK  EVLIENYEAM  KKWFVFEQSS480
AAGDKEGLSR  YIWDTQFHYG  DWMFPSFMMK  DPNPMKTAAV  TKDLVATAFL  AHSAELLAQI540
AEELGDDGQS  YRDYAANVKA  AFTQAFVTET  GYLTADYQGC  YVLALAFKMV  PLAIEKSLVK600
RLVALIEANG  RRLDTGFLSV  PYLLDVLSDY  GYVELAKAVF  LQDECPSWFY  EVDHGATTIW660
ESWAAIQPDG  TVEPFSFNHY  AFGCVLDWMV  REIAGLKNTA  PGYEAIEVSP  SVEIVDDFEL720
CYQSATGLIK  IIKRGKKWMI  QADENIEVVV  DLNPVQGKLV  RNLISSDIMI  DERS774

Predicted 3D structure by AlphaFold2 with pLDDT = 94.83 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM67(45-195)+GH78(237-732)

MRNNKFSWVG  RWISTARALV  NEEPEFSLVD  MFAGKKAKQT  PVEERLNPTV  YFKKVFQLNK60
PIKKAELIVT  AQGIYHAMMN  GHEVTDAIFT  PDYTNYQQFL  MYQQYDVTNL  IKVGTNVLAV120
EVADGWYAGR  ISVQGGSAQF  GNRLALLADL  VVTFEDEKQL  IIGTDNSFTA  GYGKHVYADI180
QIGEKQDLRL  DTDWQVSEEL  LPEAVFEIAA  DYTRLTPQEG  PMVYRQERLD  AQKIWLEDTE240
YIVDFGQVIA  GRVRLTVDLA  KDQEIIIEHS  EVLDETGRFF  RNIVGRNKDA  RDIFIGRGQK300
EVLEPDFTFH  GFRYVKITGL  THFKLDDIKA  IAIYSQMETT  GYFKTNDAKM  NRLLSNILWS360
QKGNMLSIPT  DCPQRERVGW  TGDMQVFASA  STFFMNSNQL  IQRWLKTVRI  DQRENGAIVD420
YSPEPLDAKN  LAFTGVEASA  GWGDAIIMVP  WTLYQRYGNK  EVLIENYEAM  KKWFVFEQSS480
AAGDKEGLSR  YIWDTQFHYG  DWMFPSFMMK  DPNPMKTAAV  TKDLVATAFL  AHSAELLAQI540
AEELGDDGQS  YRDYAANVKA  AFTQAFVTET  GYLTADYQGC  YVLALAFKMV  PLAIEKSLVK600
RLVALIEANG  RRLDTGFLSV  PYLLDVLSDY  GYVELAKAVF  LQDECPSWFY  EVDHGATTIW660
ESWAAIQPDG  TVEPFSFNHY  AFGCVLDWMV  REIAGLKNTA  PGYEAIEVSP  SVEIVDDFEL720
CYQSATGLIK  IIKRGKKWMI  QADENIEVVV  DLNPVQGKLV  RNLISSDIMI  DERS774

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help