CAZyme3D

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Entry ID

Information for CAZyme ID: QPC80193.1

Basic Information

GenBank IDQPC80193.1
FamilyCBM35, GH27
Sequence Length567
UniProt IDA0A7S8E4G0(100,100)Download
Average pLDDT?91.72
CAZy50 ID3958
CAZy50 RepNo, CBX98985.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID101028
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium pseudograminearum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSSPAPARRD  THGIGNFKVP  IIIAMSALAF  AVLLASIGGT  SGKTVRSLTP  PMGWNSYNHY60
NCNPSEDIIK  INAKGLVDLG  FLDLGYSIVT  VDCGWPSRDR  DSKGRLQWNE  TLFPSGPKAL120
GDYIHDLGLE  FGLYSGAGYL  QCGSQDIPAS  LGYEEIDAKS  FAEWGGDTLK  YDNCYATSKT180
DMVDSDSAEA  KSPDRFIKMA  AAINETDRDI  KYFLCQWGIG  EDVPQWATKV  GNSWRMSNDI240
FNAWRAIWRI  TNQAVAHSKY  NHPGAFADLD  MLIIGLGALS  YEEERFHFGF  WSMMKSPLII300
GGVMDAKQIP  SHSLEVMSNK  EAIAINQDAL  GQAAQLVIRH  TEEQWDVWSG  NLTSNRKVLG360
VANWKNETQT  VEVDLALIGV  EKAKARDVWA  HEDLTISGTQ  KFELKPHELR  LLVLSDITQT420
PKPKQFGYYA  APKAALGGSA  SLVDCGANEC  LPVNKKIKSI  GKDAKVTFKF  VSAPKDGPLY480
VGVDYINHEY  HHTIGDWETN  TRNMSISVNG  EDAKRWAFPN  AGGDWFESDR  MTILLDGFKK540
GKDNTVTFTA  SPSGGWAPDL  VAFEVLA567

Predicted 3D structure by AlphaFold2 with pLDDT = 91.72 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH27(148-394)+CBM35(462-557)

MSSPAPARRD  THGIGNFKVP  IIIAMSALAF  AVLLASIGGT  SGKTVRSLTP  PMGWNSYNHY60
NCNPSEDIIK  INAKGLVDLG  FLDLGYSIVT  VDCGWPSRDR  DSKGRLQWNE  TLFPSGPKAL120
GDYIHDLGLE  FGLYSGAGYL  QCGSQDIPAS  LGYEEIDAKS  FAEWGGDTLK  YDNCYATSKT180
DMVDSDSAEA  KSPDRFIKMA  AAINETDRDI  KYFLCQWGIG  EDVPQWATKV  GNSWRMSNDI240
FNAWRAIWRI  TNQAVAHSKY  NHPGAFADLD  MLIIGLGALS  YEEERFHFGF  WSMMKSPLII300
GGVMDAKQIP  SHSLEVMSNK  EAIAINQDAL  GQAAQLVIRH  TEEQWDVWSG  NLTSNRKVLG360
VANWKNETQT  VEVDLALIGV  EKAKARDVWA  HEDLTISGTQ  KFELKPHELR  LLVLSDITQT420
PKPKQFGYYA  APKAALGGSA  SLVDCGANEC  LPVNKKIKSI  GKDAKVTFKF  VSAPKDGPLY480
VGVDYINHEY  HHTIGDWETN  TRNMSISVNG  EDAKRWAFPN  AGGDWFESDR  MTILLDGFKK540
GKDNTVTFTA  SPSGGWAPDL  VAFEVLA567

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help