CAZyme3D

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Entry ID

Information for CAZyme ID: QPC79184.1

Basic Information

GenBank IDQPC79184.1
FamilyCBM18, CE4
Sequence Length452
UniProt IDA0A7S8IBF8(100,100)Download
Average pLDDT?85.81
CAZy50 ID20069
CAZy50 RepNo, UNI14737.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID101028
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium pseudograminearum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKGSFASLVA  LLTVNVVATP  SFRNIFGLEK  RQAGRCGTGF  GGVCAANECC  SSAGWCGTGY60
LYCSAPSCQI  EYGPGCDANV  RPTGPDTTNV  ARPKVGSIPY  GQAIYRCNRN  GDIAITYDDG120
PYTYTEDLLD  LLQRYNVKAT  FYITGRNLGK  GAINDPATPW  PGLVRRMIRD  GHQIASHTWS180
HQRLTTLSRA  KFWNQMIFNE  IAFADILGYF  PTYMRPPYSA  SNATTDAWLG  ELGYHVTYFN240
LDTEGYLHDS  PNTIDTSKQI  WDTTVEGKSP  ASNKWLHIEH  DPVYQSVYNL  TEYMLKSLVR300
NNFRGVTVGE  CLEDPKANWY  RSVTPSSAST  TTTAATSSAT  FPLTTNGRCG  SRHGGATCRG360
EFNGETCCSQ  NGWCGSTDAH  CGRGCQPVFG  TCSGVSEPAG  PEPTATNPGR  CGSAFGGKKC420
DQWDPCCSRA  GWCGTSTDHC  GSGCQSAFGT  CN452

Predicted 3D structure by AlphaFold2 with pLDDT = 85.81 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM18(36-69)+CE4(111-237)+CBM18(348-386)+CBM18(410-446)

MKGSFASLVA  LLTVNVVATP  SFRNIFGLEK  RQAGRCGTGF  GGVCAANECC  SSAGWCGTGY60
LYCSAPSCQI  EYGPGCDANV  RPTGPDTTNV  ARPKVGSIPY  GQAIYRCNRN  GDIAITYDDG120
PYTYTEDLLD  LLQRYNVKAT  FYITGRNLGK  GAINDPATPW  PGLVRRMIRD  GHQIASHTWS180
HQRLTTLSRA  KFWNQMIFNE  IAFADILGYF  PTYMRPPYSA  SNATTDAWLG  ELGYHVTYFN240
LDTEGYLHDS  PNTIDTSKQI  WDTTVEGKSP  ASNKWLHIEH  DPVYQSVYNL  TEYMLKSLVR300
NNFRGVTVGE  CLEDPKANWY  RSVTPSSAST  TTTAATSSAT  FPLTTNGRCG  SRHGGATCRG360
EFNGETCCSQ  NGWCGSTDAH  CGRGCQPVFG  TCSGVSEPAG  PEPTATNPGR  CGSAFGGKKC420
DQWDPCCSRA  GWCGTSTDHC  GSGCQSAFGT  CN452

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help