CAZyme3D

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Entry ID

Information for CAZyme ID: QPC71517.1

Basic Information

GenBank IDQPC71517.1
FamilyCBM18, CE4
Sequence Length470
UniProt IDA0A7S8I3U4(100,100)Download
Average pLDDT?85.43
CAZy50 ID74284
CAZy50 RepNo, CZS82386.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID101028
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium pseudograminearum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKSLVLLLLT  TVVYADDLVA  RHRGAEFNIH  VRHEDGASHQ  PETLSKRASC  GKGAGSCPKG60
QCCSESGQCG  TTSAYCTSPE  CQMAYSNGNC  DGSKKPKGET  TANISRSTTG  KAPYDKYIIT120
CTTPGIVALT  FDDGPYKYTN  QVLDVLKKHN  IKATFFITGN  NLGKGQIDDH  SKPWPKILRR180
MHSEGHQLAS  HSWSHQDLSA  ASDEIRKQQI  IYNEMAFRNV  LGFFPKYLRP  PYGTCSRDSG240
CLDYVTKLGY  HVVNWNIDTK  DYLNDSPSKI  QTSKNTFSDS  VSTDSKSNSY  IELSHDIHEQ300
TAYNLTEFMI  KTLKARGYRA  VPVGECLGDA  RENWYVDAKG  IKSGRSIQGR  GSYDPPPTSP360
AITKDGTCGA  KNGLKCTGSK  WGNCCSYYNF  CGSTSGYCDG  GCQSKYGECN  KIKPGSKLIV420
SDNGLCGEKY  HQTCAGSRYG  NCCSKYGNCG  KTSEYCASGC  QSGFGTCPYS  470

Predicted 3D structure by AlphaFold2 with pLDDT = 85.43 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM18(50-82)+CE4(122-254)+CBM18(426-462)

MKSLVLLLLT  TVVYADDLVA  RHRGAEFNIH  VRHEDGASHQ  PETLSKRASC  GKGAGSCPKG60
QCCSESGQCG  TTSAYCTSPE  CQMAYSNGNC  DGSKKPKGET  TANISRSTTG  KAPYDKYIIT120
CTTPGIVALT  FDDGPYKYTN  QVLDVLKKHN  IKATFFITGN  NLGKGQIDDH  SKPWPKILRR180
MHSEGHQLAS  HSWSHQDLSA  ASDEIRKQQI  IYNEMAFRNV  LGFFPKYLRP  PYGTCSRDSG240
CLDYVTKLGY  HVVNWNIDTK  DYLNDSPSKI  QTSKNTFSDS  VSTDSKSNSY  IELSHDIHEQ300
TAYNLTEFMI  KTLKARGYRA  VPVGECLGDA  RENWYVDAKG  IKSGRSIQGR  GSYDPPPTSP360
AITKDGTCGA  KNGLKCTGSK  WGNCCSYYNF  CGSTSGYCDG  GCQSKYGECN  KIKPGSKLIV420
SDNGLCGEKY  HQTCAGSRYG  NCCSKYGNCG  KTSEYCASGC  QSGFGTCPYS  470

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help