CAZyme3D

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Entry ID

Information for CAZyme ID: QPC62043.1

Basic Information

GenBank IDQPC62043.1
FamilyPL4_3
Sequence Length686
UniProt IDA0A7S8D571(100,100)Download
Average pLDDT?91.00
CAZy50 ID1380
CAZy50 RepNo, UQC89697.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID5516
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium culmorum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKFRKLSTAF  VVSLFYAPQL  VAAALNATET  DTQLVISNDR  LYAAVQKKGG  AIVKLTLDGT60
NLLGSPSGST  GIGPYLDCYC  TPKGFWTPGS  VTPKYKLFKG  KDAKGKDYGG  IVMSDTYTET120
GQVLEQYWFL  RDGETGLHTF  SRVAYHNEEQ  PFLRNLQELR  TLFRPNNDMW  THLTNTKHYA180
PLPGKEAKEK  QVVVQDATWY  MGNTPNDPYV  KQEADYFTKY  TFQDNWRDID  AYGLFADGSK240
TEDGDAYGAW  LVMNTKDTYF  GGPLHSDLVV  DGILYNYISS  NHHGDQTPNI  TNGFDRTFGP300
VSLFEVPARI  LSLMAPKQYF  HFNRFPGTTD  ILKAQADAAQ  YADPEWNADF  YDSIAKHVPN360
YVPTKGRGKF  EVKVDLPKGA  KNAIAVLAQS  GVDFQDNVFD  TKAYQYWANL  DESGRATIPR420
VKSGTYRLTV  YADNIFGQYT  QDKIKVSAGK  TEKKNVRWRE  ESAGKELWRV  GTPDKTSGEY480
RHGFEPDTSK  PLQPEQYRIY  WANWDFVKDF  PDGVNFKVGE  SDVGKDLNYV  HWSVFGGKGN540
YPRPEQYVGN  GDVNNWTLAF  DLKESQFKHK  KRATFTVQLA  GAKTAAGNTD  VYNASEPHSN600
LKYTVNINGK  DLEPWVIPYY  QSSSCAVRSS  VSCYNLAHKF  EFDAKWLKKG  ENEMVLSLPY660
NGTNYESAVL  PTSVYVQYDA  LRLEIE686

Predicted 3D structure by AlphaFold2 with pLDDT = 91.00 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL4_3(23-671)

MKFRKLSTAF  VVSLFYAPQL  VAAALNATET  DTQLVISNDR  LYAAVQKKGG  AIVKLTLDGT60
NLLGSPSGST  GIGPYLDCYC  TPKGFWTPGS  VTPKYKLFKG  KDAKGKDYGG  IVMSDTYTET120
GQVLEQYWFL  RDGETGLHTF  SRVAYHNEEQ  PFLRNLQELR  TLFRPNNDMW  THLTNTKHYA180
PLPGKEAKEK  QVVVQDATWY  MGNTPNDPYV  KQEADYFTKY  TFQDNWRDID  AYGLFADGSK240
TEDGDAYGAW  LVMNTKDTYF  GGPLHSDLVV  DGILYNYISS  NHHGDQTPNI  TNGFDRTFGP300
VSLFEVPARI  LSLMAPKQYF  HFNRFPGTTD  ILKAQADAAQ  YADPEWNADF  YDSIAKHVPN360
YVPTKGRGKF  EVKVDLPKGA  KNAIAVLAQS  GVDFQDNVFD  TKAYQYWANL  DESGRATIPR420
VKSGTYRLTV  YADNIFGQYT  QDKIKVSAGK  TEKKNVRWRE  ESAGKELWRV  GTPDKTSGEY480
RHGFEPDTSK  PLQPEQYRIY  WANWDFVKDF  PDGVNFKVGE  SDVGKDLNYV  HWSVFGGKGN540
YPRPEQYVGN  GDVNNWTLAF  DLKESQFKHK  KRATFTVQLA  GAKTAAGNTD  VYNASEPHSN600
LKYTVNINGK  DLEPWVIPYY  QSSSCAVRSS  VSCYNLAHKF  EFDAKWLKKG  ENEMVLSLPY660
NGTNYESAVL  PTSVYVQYDA  LRLEIE686

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help