CAZyme3D

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Entry ID

Information for CAZyme ID: QOW77948.1

Basic Information

GenBank IDQOW77948.1
FamilyGH36
Sequence Length780
UniProt IDA0A7S7BCJ4(100,100)Download
Average pLDDT?92.58
CAZy50 ID16761
CAZy50 RepNo, CAE6203979.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2784629
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderVitales
FamilyVitaceae
GenusVitis
SpeciesVitis sp. ITA362-1382

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAPSLSKGAP  DVMGLEDGHS  SSSITLQGSD  FLANGHPVLT  EVPSNIMAIP  SPSSPGNKAK60
TMVGCFVGFE  AGEAKSRHVV  PVGKLQEIRF  MSIFRFKVWW  TTHWVGTRGG  DVEHETQMMI120
LDKSDMGRPY  VLLLPLIEGP  FRASLQPGED  DNVDICVESC  STSVRTSAFR  SCLYMHVGDN180
PYKLVKDAMN  VVRVHLGTFK  LLEEKSPPGI  VDKFGWCTWD  AFYLKVHPDG  VWEGVKGLVE240
GGCPPGMVLI  DDGWQSIGHD  DEPISDQEGI  NRTAAGEQMP  CRLIKFEENY  KFREYESPRV300
PQEKGMGAFV  RDLKDEFKSV  EHVYVWHALC  GYWGGIRPSV  PGMPESRVIA  PKLSQGLQMT360
MEDLAVDKIV  NNGVGLVPPE  SVAEMYDGLH  SRLQSVGVDG  VKVDVIHLLE  MVAEEYGGRV420
ELAKAYYKAL  TASVRKHFKG  NGVIASMEHC  NDFMFLGTET  ISLGRVGDDF  WCTDPSGDPN480
GTFWLQGCHM  VHCAYNSLWM  GNFIHPDWDM  FQSTHPCAEF  HAASRAVSGG  PIYVSDHVGK540
HNFQLLKTLV  LPDGSLLRCQ  HYALPSRDCL  FQDPLHDGKT  MLKIWNLNKY  TGVLGAFNCQ600
GGGWCRETRR  NKSASEYSRA  VSCLANPSKD  IEWSAGKSPI  STKDVDLFAV  YMFQEKTMKL660
LKPSESLEIS  LDPFKFELLT  VSPVKVLPRN  NKNSIQFAPF  GLVNMLNGGG  AVEWVELDED720
EDRVKIGVKG  CGEMKAFASE  KPTTCKINGE  GVKFSYEAHT  VGVQVPWPSS  SQVSIVEYLF780
780

Predicted 3D structure by AlphaFold2 with pLDDT = 92.58 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

MAPSLSKGAP  DVMGLEDGHS  SSSITLQGSD  FLANGHPVLT  EVPSNIMAIP  SPSSPGNKAK60
TMVGCFVGFE  AGEAKSRHVV  PVGKLQEIRF  MSIFRFKVWW  TTHWVGTRGG  DVEHETQMMI120
LDKSDMGRPY  VLLLPLIEGP  FRASLQPGED  DNVDICVESC  STSVRTSAFR  SCLYMHVGDN180
PYKLVKDAMN  VVRVHLGTFK  LLEEKSPPGI  VDKFGWCTWD  AFYLKVHPDG  VWEGVKGLVE240
GGCPPGMVLI  DDGWQSIGHD  DEPISDQEGI  NRTAAGEQMP  CRLIKFEENY  KFREYESPRV300
PQEKGMGAFV  RDLKDEFKSV  EHVYVWHALC  GYWGGIRPSV  PGMPESRVIA  PKLSQGLQMT360
MEDLAVDKIV  NNGVGLVPPE  SVAEMYDGLH  SRLQSVGVDG  VKVDVIHLLE  MVAEEYGGRV420
ELAKAYYKAL  TASVRKHFKG  NGVIASMEHC  NDFMFLGTET  ISLGRVGDDF  WCTDPSGDPN480
GTFWLQGCHM  VHCAYNSLWM  GNFIHPDWDM  FQSTHPCAEF  HAASRAVSGG  PIYVSDHVGK540
HNFQLLKTLV  LPDGSLLRCQ  HYALPSRDCL  FQDPLHDGKT  MLKIWNLNKY  TGVLGAFNCQ600
GGGWCRETRR  NKSASEYSRA  VSCLANPSKD  IEWSAGKSPI  STKDVDLFAV  YMFQEKTMKL660
LKPSESLEIS  LDPFKFELLT  VSPVKVLPRN  NKNSIQFAPF  GLVNMLNGGG  AVEWVELDED720
EDRVKIGVKG  CGEMKAFASE  KPTTCKINGE  GVKFSYEAHT  VGVQVPWPSS  SQVSIVEYLF780
780

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help